FvH4_2g19330

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
16455297 .. 16458654
3358 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g19330.t5

Sequence Viewer

Length: 1182 bp
ATGACGGAAATCACCAGCCTGAGCTCCGACGTGACGGAGCTGATCCTCTCCTACCTCCCTATCCCCACCCTCGTCCGCGTCTCCACCGTCTGCAAGCTCTGGCAATCCATCATCTCCTCCACCACCTTCTCCGCCACGCAAATCCAAACTCAAACCCAATCCCACCCTTGGTTCTTCCTCTTCGGCATCCACAACACCTCCTCCAAGAACAACCAGTCCTTCGCCTTCGACCCTCTCTCCAACCGCTGGCTCCTCCTCCCCTCCCCCACCTTCCCTCCCCACCACCATCACTACTCCCACTCCTCCTTCCTCGGCGCCGACGGCTTCTTCCTCATCACCGCCCCCACCTTCACCTACTCCCGCATCCTCAAACGCTCCTGGCGCCCCACCTCCCCTCTCCACTTCTCCCGCATCAACCCTCTTCTCGGCGTCTTCTCCTCCTCCTCCTCCTCCGCCTCTCTCCTCCCCAACTTCATCGTCGTCGGCGGCGTCAGGTTCATCGGCAACTTGGTCGACATAGAAGACCGCTTGGCCGTCGAGATCTACAACCCCGACTCCGACTCCTGGCAGCTCGGTCCTCCTCTCCCTGCTGACTTCAGATCCGGGAACTCCTCCCAGTCCTTGTCCTCTGCCCTCTTCAACGGCAGGTTCTACGTCTTCGGCATCTATTCCTGCTTCGTATCGTCTTTTGATCTTCACACAAATTCCTGGAGCGTCGTCCAGAGTCTCCGTCCACCTGGAGTTGTCTTCTCTTTCTTGCTCGCTTGCCGGGACAGGCTTGTTCTGGCCGGAATCTGCAACGGGCCTAACGGCTCGTCCTTTAACTTGTGGAGGATCAGGGAGGAGAGTATGGAGTACAGTGAGATCGCGATCATGCCTCAGGACTTGCTGTGTAGCTTGTTTGAGGGGGATGAGGAGGATAAGTTTGCGAGCTTGAAATGTGTTGGGTTGGGGAATCTTGTTTATGTGTTCAATGAAGAGTACCATAAGAAGTATCCGGCATGTGTCTGCGAGATTAGCGGGGAGACTGGGAAGTGTAGCTGGAGGAGAGTGCCTCAGTTGCCTTCACCTGTTAATAAGTTTCATCAAGTTATAAGCTTTTGTTCCACGGTTTCGCTCAGTAGTATTCTTCAGGCTGAGGAAGAGGGAGACGTTGGTCCGCTGCAGCTTATGGATGACTGA

Protein Analysis

394

Amino Acids

43.86

Weight (kDa)

5.76

Isoelectric Point (pI)

60.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 4 - 41 1.1e-07 F-box domain
F-box-like PF12937 10 - 41 6.6e-07 F-box-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1094
Acc36I ACCTGC 1 cut(s) 636
AccB1I GGYRCC 2 cut(s) 314, 381
AccB7I CCANNNNNTGG 1 cut(s) 246
AccI GTMKAC 1 cut(s) 513
AccII CGCG 2 cut(s) 78, 869
AclWI GGATC 3 cut(s) 37, 594, 842
AcoI YGGCCR 2 cut(s) 531, 786
AcsI RAATTY 1 cut(s) 703
AcuI CTGAAG 2 cut(s) 580, 1115
AcyI GRCGYC 4 cut(s) 315, 382, 429, 489
AfaI GTAC 2 cut(s) 857, 983
AfiI CCNNNNNNNGG 4 cut(s) 168, 246, 425, 564
AgsI TTSAA 3 cut(s) 640, 937, 973
AjiI CACGTC 1 cut(s) 31
AjnI CCWGG 4 cut(s) 377, 563, 707, 736
AloI GAACNNNNNNTCC 2 cut(s) 200, 232
AluBI AGCT 9 cut(s) 24, 40, 97, 571, 897, 933, 1041, 1098, 1168
AluI AGCT 9 cut(s) 24, 40, 97, 571, 897, 933, 1041, 1098, 1168
Alw21I GWGCWC 1 cut(s) 26
Alw26I GTCTC 4 cut(s) 85, 731, 1019, 1143
AlwI GGATC 3 cut(s) 37, 594, 842
AoxI GGCC 3 cut(s) 531, 786, 803
ApeKI GCWGC 3 cut(s) 568, 1162, 1165
ApoI RAATTY 1 cut(s) 703
AspLEI GCGC 2 cut(s) 317, 384
AspS9I GGNCC 3 cut(s) 575, 803, 1157
AsuC2I CCSGG 2 cut(s) 604, 770
AsuHPI GGTGA 4 cut(s) 4, 328, 343, 1059
AvaII GGWCC 2 cut(s) 575, 1157
AxyI CCTNAGG 1 cut(s) 879
BanI GGYRCC 2 cut(s) 314, 381
BanII GRGCYC 1 cut(s) 26
BbsI GAAGAC 4 cut(s) 424, 528, 649, 739
Bbv12I GWGCWC 1 cut(s) 26
BbvCI CCTCAGC 1 cut(s) 1137
BbvI GCAGC 3 cut(s) 580, 1149, 1177
BccI CCATC 2 cut(s) 116, 294
BceAI ACGGC 4 cut(s) 337, 518, 658, 826
BcgI CGANNNNNNTGC 2 cut(s) 493, 527
BciT130I CCWGG 4 cut(s) 379, 565, 709, 738
BciVI GTATCC 1 cut(s) 1005
BcnI CCSGG 2 cut(s) 604, 770
BcoDI GTCTC 4 cut(s) 85, 731, 1019, 1143
BfmI CTRYAG 1 cut(s) 1163
BfoI RGCGCY 2 cut(s) 318, 385
BfuAI ACCTGC 1 cut(s) 636
BfuI GTATCC 1 cut(s) 1005
BglII AGATCT 1 cut(s) 540
BisI GCNGC 4 cut(s) 487, 569, 1163, 1166
BlsI GCNGC 4 cut(s) 488, 570, 1164, 1167
Bme1390I CCNGG 6 cut(s) 379, 565, 604, 709, 738, 770
Bme18I GGWCC 2 cut(s) 575, 1157
BmgBI CACGTC 1 cut(s) 31
BmgT120I GGNCC 3 cut(s) 575, 803, 1157
BmiI GGNNCC 3 cut(s) 251, 316, 383
BmrFI CCNGG 6 cut(s) 379, 565, 604, 709, 738, 770
BmrI ACTGGG 2 cut(s) 610, 1038
BmsI GCATC 4 cut(s) 195, 372, 420, 672
BmuI ACTGGG 2 cut(s) 610, 1038
BoxI GACNNNNGTC 1 cut(s) 1155
BpiI GAAGAC 4 cut(s) 424, 528, 649, 739
BplI GAGNNNNNCTC 2 cut(s) 1039, 1071
BpmI CTGGAG 3 cut(s) 730, 759, 1063
Bpu10I CCTNAGC 2 cut(s) 20, 1137
BpuMI CCSGG 2 cut(s) 604, 770
BsaBI GATNNNNATC 1 cut(s) 869
BsaHI GRCGYC 4 cut(s) 315, 382, 429, 489
BsaJI CCNNGG 3 cut(s) 167, 310, 1107
Bsc4I CCNNNNNNNGG 4 cut(s) 168, 246, 425, 564
Bse1I ACTGG 3 cut(s) 214, 616, 1033
Bse21I CCTNAGG 1 cut(s) 879
Bse8I GATNNNNATC 1 cut(s) 869
BseBI CCWGG 4 cut(s) 379, 565, 709, 738
BseDI CCNNGG 3 cut(s) 167, 310, 1107
BseGI GGATG 4 cut(s) 186, 363, 916, 1180
BseJI GATNNNNATC 1 cut(s) 869
BseLI CCNNNNNNNGG 4 cut(s) 168, 246, 425, 564
BseMII CTCAG 5 cut(s) 11, 893, 1070, 1128, 1132
BseNI ACTGG 3 cut(s) 214, 616, 1033
BseXI GCAGC 3 cut(s) 580, 1149, 1177
Bsh1236I CGCG 2 cut(s) 78, 869
BshFI GGCC 3 cut(s) 533, 788, 805
BshNI GGYRCC 2 cut(s) 314, 381
BsiHKAI GWGCWC 1 cut(s) 26
BsiSI CCGG 4 cut(s) 603, 769, 789, 998
BslFI GGGAC 1 cut(s) 785
BslI CCNNNNNNNGG 4 cut(s) 168, 246, 425, 564
BsmAI GTCTC 4 cut(s) 85, 731, 1019, 1143
BsmBI CGTCTC 2 cut(s) 85, 1143
BsmFI GGGAC 1 cut(s) 785
BsnI GGCC 3 cut(s) 533, 788, 805
Bsp1286I GDGCHC 1 cut(s) 26
Bsp143I GATC 7 cut(s) 42, 540, 599, 691, 834, 864, 870
Bsp68I TCGCGA 1 cut(s) 869
BspANI GGCC 3 cut(s) 533, 788, 805
BspCNI CTCAG 5 cut(s) 12, 892, 1069, 1129, 1131
BspFNI CGCG 2 cut(s) 78, 869
BspLI GGNNCC 3 cut(s) 251, 316, 383
BspMAI CTGCAG 1 cut(s) 1167
BspMI ACCTGC 1 cut(s) 636
BspPI GGATC 3 cut(s) 37, 594, 842
BspT107I GGYRCC 2 cut(s) 314, 381
BsrI ACTGG 3 cut(s) 214, 616, 1033
BssECI CCNNGG 3 cut(s) 167, 310, 1107
BssMI GATC 7 cut(s) 42, 540, 599, 691, 834, 864, 870
BssNI GRCGYC 4 cut(s) 315, 382, 429, 489
BssT1I CCWWGG 1 cut(s) 167
Bst2UI CCWGG 4 cut(s) 379, 565, 709, 738
Bst4CI ACNGT 3 cut(s) 88, 860, 1111
Bst6I CTCTTC 5 cut(s) 185, 426, 641, 972, 1137
BstACI GRCGYC 4 cut(s) 315, 382, 429, 489
BstC8I GCNNGC 5 cut(s) 95, 248, 762, 766, 931
BstDEI CTNAG 5 cut(s) 20, 879, 1056, 1118, 1137
BstDSI CCRYGG 1 cut(s) 1107
BstF5I GGATG 4 cut(s) 186, 363, 916, 1180
BstFNI CGCG 2 cut(s) 78, 869
BstH2I RGCGCY 2 cut(s) 318, 385
BstHHI GCGC 2 cut(s) 317, 384
BstKTI GATC 7 cut(s) 45, 543, 602, 694, 837, 867, 873
BstMAI GTCTC 4 cut(s) 85, 731, 1019, 1143
BstMBI GATC 7 cut(s) 42, 540, 599, 691, 834, 864, 870
BstMWI GCNNNNNNNGC 4 cut(s) 321, 381, 1017, 1060
BstNI CCWGG 4 cut(s) 379, 565, 709, 738
BstNSI RCATGY 1 cut(s) 1005
BstPAI GACNNNNGTC 1 cut(s) 1155
BstSCI CCNGG 6 cut(s) 377, 563, 602, 707, 736, 768
BstSFI CTRYAG 1 cut(s) 1163
BstUI CGCG 2 cut(s) 78, 869
BstV1I GCAGC 3 cut(s) 580, 1149, 1177
BstV2I GAAGAC 4 cut(s) 424, 528, 649, 739
BstX2I RGATCY 2 cut(s) 540, 599
BstYI RGATCY 2 cut(s) 540, 599
Bsu36I CCTNAGG 1 cut(s) 879
BsuI GTATCC 1 cut(s) 1005
BsuRI GGCC 3 cut(s) 533, 788, 805
BtgI CCRYGG 1 cut(s) 1107
BtrI CACGTC 1 cut(s) 31
BtsCI GGATG 4 cut(s) 186, 363, 916, 1180
BtsIMutI CAGTG 1 cut(s) 865
BtuMI TCGCGA 1 cut(s) 869
BveI ACCTGC 1 cut(s) 636
Cac8I GCNNGC 5 cut(s) 95, 248, 762, 766, 931
CfoI GCGC 2 cut(s) 317, 384
Cfr13I GGNCC 3 cut(s) 575, 803, 1157
CseI GACGC 4 cut(s) 67, 418, 478, 703
Csp6I GTAC 2 cut(s) 856, 982
CviAII CATG 2 cut(s) 874, 1002
CviQI GTAC 2 cut(s) 856, 982
DdeI CTNAG 5 cut(s) 20, 879, 1056, 1118, 1137
DinI GGCGCC 2 cut(s) 316, 383
DpnI GATC 7 cut(s) 44, 542, 601, 693, 836, 866, 872
DpnII GATC 7 cut(s) 42, 540, 599, 691, 834, 864, 870
EaeI YGGCCR 2 cut(s) 531, 786
Eam1104I CTCTTC 5 cut(s) 185, 426, 641, 972, 1137
EarI CTCTTC 5 cut(s) 185, 426, 641, 972, 1137
EciI GGCGGA 2 cut(s) 121, 442
Ecl136II GAGCTC 1 cut(s) 24
Eco130I CCWWGG 1 cut(s) 167
Eco24I GRGCYC 1 cut(s) 26
Eco47I GGWCC 2 cut(s) 575, 1157
Eco53kI GAGCTC 1 cut(s) 24
Eco57I CTGAAG 2 cut(s) 580, 1115
Eco81I CCTNAGG 1 cut(s) 879
EcoICRI GAGCTC 1 cut(s) 24
EcoRII CCWGG 4 cut(s) 377, 563, 707, 736
EcoT14I CCWWGG 1 cut(s) 167
EcoT38I GRGCYC 1 cut(s) 26
EgeI GGCGCC 2 cut(s) 316, 383
EheI GGCGCC 2 cut(s) 316, 383
ErhI CCWWGG 1 cut(s) 167
Esp3I CGTCTC 2 cut(s) 85, 1143
FaeI CATG 2 cut(s) 877, 1005
FaiI YATR 8 cut(s) 518, 851, 875, 966, 987, 1003, 1094, 1172
FaqI GGGAC 1 cut(s) 785
FatI CATG 2 cut(s) 873, 1001
FauI CCCGC 3 cut(s) 368, 416, 1013
FblI GTMKAC 1 cut(s) 513
Fnu4HI GCNGC 4 cut(s) 487, 569, 1163, 1166
FokI GGATG 3 cut(s) 173, 350, 923
FriOI GRGCYC 1 cut(s) 26
Fsp4HI GCNGC 4 cut(s) 487, 569, 1163, 1166
GlaI GCGC 2 cut(s) 316, 383
GluI GCNGC 4 cut(s) 487, 569, 1163, 1166
GsuI CTGGAG 3 cut(s) 730, 759, 1063
HaeII RGCGCY 2 cut(s) 318, 385
HaeIII GGCC 3 cut(s) 533, 788, 805
HapII CCGG 4 cut(s) 603, 769, 789, 998
HgaI GACGC 4 cut(s) 67, 418, 478, 703
HhaI GCGC 2 cut(s) 317, 384
Hin1I GRCGYC 4 cut(s) 315, 382, 429, 489
Hin1II CATG 2 cut(s) 877, 1005
Hin6I GCGC 2 cut(s) 315, 382
HinP1I GCGC 2 cut(s) 315, 382
HincII GTYRAC 1 cut(s) 514
HindII GTYRAC 1 cut(s) 514
HindIII AAGCTT 1 cut(s) 1096
HinfI GANTC 5 cut(s) 554, 560, 724, 792, 955
HpaII CCGG 4 cut(s) 603, 769, 789, 998
HphI GGTGA 4 cut(s) 4, 328, 343, 1059
Hpy166II GTNNAC 2 cut(s) 514, 734
Hpy188I TCNGA 3 cut(s) 28, 559, 599
Hpy188III TCNNGA 4 cut(s) 538, 721, 868, 881
Hpy8I GTNNAC 2 cut(s) 514, 734
Hpy99I CGWCG 6 cut(s) 32, 323, 482, 485, 539, 719
HpyAV CCTTC 7 cut(s) 136, 229, 235, 280, 316, 358, 1074
HpyCH4III ACNGT 3 cut(s) 88, 860, 1111
HpyCH4IV ACGT 3 cut(s) 30, 654, 1152
HpyCH4V TGCA 3 cut(s) 93, 798, 1165
HpyF10VI GCNNNNNNNGC 4 cut(s) 321, 381, 1017, 1060
HpyF3I CTNAG 5 cut(s) 20, 879, 1056, 1118, 1137
HpySE526I ACGT 3 cut(s) 30, 654, 1152
Hsp92I GRCGYC 4 cut(s) 315, 382, 429, 489
Hsp92II CATG 2 cut(s) 877, 1005
HspAI GCGC 2 cut(s) 315, 382
KasI GGCGCC 2 cut(s) 314, 381
Kzo9I GATC 7 cut(s) 42, 540, 599, 691, 834, 864, 870
LmnI GCTCC 5 cut(s) 29, 37, 255, 380, 711
Lsp1109I GCAGC 3 cut(s) 580, 1149, 1177
LweI GCATC 4 cut(s) 195, 372, 420, 672
MaeII ACGT 3 cut(s) 30, 654, 1152
MaeIII GTNAC 1 cut(s) 31
MalI GATC 7 cut(s) 44, 542, 601, 693, 836, 866, 872
MboI GATC 7 cut(s) 42, 540, 599, 691, 834, 864, 870
MflI RGATCY 2 cut(s) 540, 599
MhlI GDGCHC 1 cut(s) 26
MluCI AATT 1 cut(s) 703
Mly113I GGCGCC 2 cut(s) 315, 382
MlyI GAGTC 3 cut(s) 548, 554, 733
MmeI TCCRAC 3 cut(s) 51, 264, 582
MseI TTAA 2 cut(s) 822, 1074
MspA1I CMGCKG 2 cut(s) 246, 1162
MspI CCGG 4 cut(s) 603, 769, 789, 998
MspR9I CCNGG 6 cut(s) 379, 565, 604, 709, 738, 770
MvaI CCWGG 4 cut(s) 379, 565, 709, 738
MvnI CGCG 2 cut(s) 78, 869
MwoI GCNNNNNNNGC 4 cut(s) 321, 381, 1017, 1060
NarI GGCGCC 2 cut(s) 315, 382
NciI CCSGG 2 cut(s) 604, 770
NdeII GATC 7 cut(s) 42, 540, 599, 691, 834, 864, 870
NlaIII CATG 2 cut(s) 877, 1005
NlaIV GGNNCC 3 cut(s) 251, 316, 383
NmeAIII GCCGAG 2 cut(s) 291, 405
NmuCI GTSAC 1 cut(s) 31
NruI TCGCGA 1 cut(s) 869
NspI RCATGY 1 cut(s) 1005
PcsI WCGNNNNNNNCGW 1 cut(s) 486
PfeI GAWTC 2 cut(s) 792, 955
PflMI CCANNNNNTGG 1 cut(s) 246
PfoI TCCNGGA 2 cut(s) 602, 707
PkrI GCNGC 4 cut(s) 488, 570, 1164, 1167
PleI GAGTC 3 cut(s) 548, 554, 732
PluTI GGCGCC 2 cut(s) 318, 385
PpsI GAGTC 3 cut(s) 548, 554, 732
PshAI GACNNNNGTC 1 cut(s) 1155
PsiI TTATAA 1 cut(s) 1094
Psp124BI GAGCTC 1 cut(s) 26
Psp6I CCWGG 4 cut(s) 377, 563, 707, 736
PspGI CCWGG 4 cut(s) 377, 563, 707, 736
PspN4I GGNNCC 3 cut(s) 251, 316, 383
PspPI GGNCC 3 cut(s) 575, 803, 1157
PstI CTGCAG 1 cut(s) 1167
PsuI RGATCY 2 cut(s) 540, 599
RruI TCGCGA 1 cut(s) 869
RsaI GTAC 2 cut(s) 857, 983
RsaNI GTAC 2 cut(s) 856, 982
SacI GAGCTC 1 cut(s) 26
SalI GTCGAC 1 cut(s) 512
SaqAI TTAA 2 cut(s) 822, 1074
SatI GCNGC 4 cut(s) 487, 569, 1163, 1166
Sau3AI GATC 7 cut(s) 42, 540, 599, 691, 834, 864, 870
Sau96I GGNCC 3 cut(s) 575, 803, 1157
SchI GAGTC 3 cut(s) 548, 554, 733
ScrFI CCNGG 6 cut(s) 379, 565, 604, 709, 738, 770
SduI GDGCHC 1 cut(s) 26
SfaNI GCATC 4 cut(s) 195, 372, 420, 672
SfcI CTRYAG 1 cut(s) 1163
SfoI GGCGCC 2 cut(s) 316, 383
SinI GGWCC 2 cut(s) 575, 1157
Sse9I AATT 1 cut(s) 703
SspDI GGCGCC 2 cut(s) 314, 381
SstI GAGCTC 1 cut(s) 26
StyD4I CCNGG 6 cut(s) 377, 563, 602, 707, 736, 768
StyI CCWWGG 1 cut(s) 167
TaaI ACNGT 3 cut(s) 88, 860, 1111
TaiI ACGT 3 cut(s) 33, 657, 1155
TaqI TCGA 3 cut(s) 228, 513, 537
TaqII GACCGA 1 cut(s) 563
TasI AATT 1 cut(s) 703
TatI WGTACW 1 cut(s) 855
TauI GCSGC 1 cut(s) 489
TfiI GAWTC 2 cut(s) 792, 955
Tru1I TTAA 2 cut(s) 822, 1074
Tru9I TTAA 2 cut(s) 822, 1074
TscAI CASTG 1 cut(s) 865
TseFI GTSAC 1 cut(s) 31
TseI GCWGC 3 cut(s) 568, 1162, 1165
Tsp45I GTSAC 1 cut(s) 31
TspDTI ATGAA 4 cut(s) 463, 487, 990, 1073
TspGWI ACGGA 3 cut(s) 20, 50, 719
TspRI CASTG 1 cut(s) 865
Van91I CCANNNNNTGG 1 cut(s) 246
VpaK11BI GGWCC 2 cut(s) 575, 1157
XapI RAATTY 1 cut(s) 703
XceI RCATGY 1 cut(s) 1005
XmiI GTMKAC 1 cut(s) 513
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.