Rmu_sc0012068.1_g000004

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0012068.1
Physical Location & Seq
Reverse (-)
13784 .. 14941
1158 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0012068.1_g000004.1.cds

Sequence Viewer

Length: 1158 bp
atgacggaaatcacgaacctgagctccgacgtaacggagctgatcctctcctacctccccatcccgagcctcgtccgagcctccaccgtctgcaagctctggcaatccatcatctcctccaccaccttctccgcgacccaaacccaatcccaatcccacccctggttcttcctctacggcatccacaacacctcctccaagaacaaccagtccttcgccttcgaccctctctccaaccgctggctccgcctccccacccccaccttccctccccaccactactcccactcctgcttcctcggcgccgacggcttcttcctcatcaccgcccccaacttcacctactccagaatcctcaagcgctcttggcgctccacctcgcctctccacttctcccgcatcaaccctcttctcggcgtcttcgactccggctctctcctccccaacttcatcgtcgtcggcggtgtcagattcatcggcaacttggtcgacatcgaggaccgcttggccgtcgagatctacacccccgactccgattcctggcagctcggtcctcctctccctgctgatttcagatccggcaattcctcccagtccttgtcatccgccctcttcaaagggcggttctacgtcttcggcatctattcctgcttcatttcatcttttgacctacacaccaacgcctggagccaagtccagactctccggccgcctggagttgtcttctctttcttgattggctgccgggacaggcttgttctggccggaatctgcaacgggcctctcggatcctcctttaatctgtggagtatcgaggaggccaccatggagttcagtgagattgcaatcatgcctcaggacttgctgtgtagcttgtttgagggggatgaggaggataagtttgcgagcttgaaatgtgtgggcttgggaaatcttatatacgtgtttaatgaagagtaccataagaagtacccggcttgtgtttgcgagattagcagtgagactccgcagtgcagctggaggagagtgcctcccttgccttcacctgtgaataagtttcaccaagttataagcttttgttccacggtttcgctcaatactattcttcagcctgaggaagaggggcacgttggtcccgtgcagcctatggttgactga

Protein Analysis

385

Amino Acids

43.04

Weight (kDa)

5.68

Isoelectric Point (pI)

61.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1070
AccB1I GGYRCC 1 cut(s) 302
AccB7I CCANNNNNTGG 2 cut(s) 240, 684
AccI GTMKAC 1 cut(s) 489
AccII CGCG 1 cut(s) 134
AclWI GGATC 4 cut(s) 37, 570, 783, 796
AcoI YGGCCR 3 cut(s) 507, 707, 762
AcuI CTGAAG 1 cut(s) 1091
AcyI GRCGYC 2 cut(s) 303, 417
AfaI GTAC 2 cut(s) 959, 971
AfeI AGCGCT 1 cut(s) 362
AfiI CCNNNNNNNGG 5 cut(s) 162, 240, 413, 540, 684
AflIII ACRYGT 1 cut(s) 942
AgsI TTSAA 2 cut(s) 616, 913
AjnI CCWGG 4 cut(s) 161, 539, 683, 712
AloI GAACNNNNNNTCC 4 cut(s) 8, 40, 194, 226
AluBI AGCT 8 cut(s) 24, 40, 97, 547, 873, 909, 1017, 1074
AluI AGCT 8 cut(s) 24, 40, 97, 547, 873, 909, 1017, 1074
Alw21I GWGCWC 1 cut(s) 26
Alw26I GTCTC 1 cut(s) 995
AlwI GGATC 4 cut(s) 37, 570, 783, 796
Ama87I CYCGRG 1 cut(s) 64
Aor51HI AGCGCT 1 cut(s) 362
AoxI GGCC 5 cut(s) 507, 707, 762, 779, 819
ApeKI GCWGC 4 cut(s) 544, 741, 1014, 1141
AspLEI GCGC 3 cut(s) 305, 363, 372
AspS9I GGNCC 4 cut(s) 499, 551, 779, 1133
AsuC2I CCSGG 2 cut(s) 746, 974
AsuHPI GGTGA 4 cut(s) 316, 331, 1035, 1052
AvaI CYCGRG 1 cut(s) 64
AvaII GGWCC 3 cut(s) 499, 551, 1133
AxyI CCTNAGG 2 cut(s) 855, 1113
BaeGI GKGCMC 1 cut(s) 1128
BamHI GGATCC 1 cut(s) 788
BanI GGYRCC 1 cut(s) 302
BanII GRGCYC 1 cut(s) 26
BbsI GAAGAC 3 cut(s) 412, 625, 715
Bbv12I GWGCWC 1 cut(s) 26
BbvI GCAGC 4 cut(s) 556, 728, 1026, 1153
BccI CCATC 2 cut(s) 68, 116
BceAI ACGGC 3 cut(s) 193, 325, 494
BcgI CGANNNNNNTGC 2 cut(s) 469, 503
BciT130I CCWGG 4 cut(s) 163, 541, 685, 714
BcnI CCSGG 2 cut(s) 746, 974
BcoDI GTCTC 1 cut(s) 995
BfoI RGCGCY 3 cut(s) 306, 364, 373
BglII AGATCT 1 cut(s) 516
BisI GCNGC 5 cut(s) 545, 710, 742, 1015, 1142
BlsI GCNGC 5 cut(s) 546, 711, 743, 1016, 1143
Bme1390I CCNGG 6 cut(s) 163, 541, 685, 714, 746, 974
Bme18I GGWCC 3 cut(s) 499, 551, 1133
BmeT110I CYCGRG 1 cut(s) 64
BmgT120I GGNCC 4 cut(s) 499, 551, 779, 1133
BmiI GGNNCC 5 cut(s) 245, 304, 689, 790, 1135
BmrFI CCNGG 6 cut(s) 163, 541, 685, 714, 746, 974
BmrI ACTGGG 1 cut(s) 586
BmsI GCATC 3 cut(s) 189, 408, 648
BmuI ACTGGG 1 cut(s) 586
BpiI GAAGAC 3 cut(s) 412, 625, 715
BplI GAGNNNNNCTC 2 cut(s) 1015, 1047
BpmI CTGGAG 4 cut(s) 331, 706, 735, 1039
Bpu10I CCTNAGC 1 cut(s) 20
BpuEI CTTGAG 1 cut(s) 341
BpuMI CCSGG 2 cut(s) 746, 974
BsaAI YACGTR 1 cut(s) 943
BsaBI GATNNNNATC 1 cut(s) 845
BsaHI GRCGYC 2 cut(s) 303, 417
BsaJI CCNNGG 4 cut(s) 161, 298, 825, 1083
Bsc4I CCNNNNNNNGG 5 cut(s) 162, 240, 413, 540, 684
Bse1I ACTGG 2 cut(s) 208, 592
Bse21I CCTNAGG 2 cut(s) 855, 1113
Bse8I GATNNNNATC 1 cut(s) 845
BseBI CCWGG 4 cut(s) 163, 541, 685, 714
BseDI CCNNGG 4 cut(s) 161, 298, 825, 1083
BseGI GGATG 4 cut(s) 60, 180, 602, 892
BseJI GATNNNNATC 1 cut(s) 845
BseLI CCNNNNNNNGG 5 cut(s) 162, 240, 413, 540, 684
BseMII CTCAG 3 cut(s) 11, 869, 1104
BseNI ACTGG 2 cut(s) 208, 592
BseRI GAGGAG 7 cut(s) 106, 184, 428, 546, 830, 905, 1036
BseSI GKGCMC 1 cut(s) 1128
BseX3I CGGCCG 1 cut(s) 707
BseXI GCAGC 4 cut(s) 556, 728, 1026, 1153
BsgI GTGCAG 1 cut(s) 1033
Bsh1236I CGCG 1 cut(s) 134
Bsh1285I CGRYCG 1 cut(s) 710
BshFI GGCC 5 cut(s) 509, 709, 764, 781, 821
BshNI GGYRCC 1 cut(s) 302
BsiEI CGRYCG 1 cut(s) 710
BsiHKAI GWGCWC 1 cut(s) 26
BsiHKCI CYCGRG 1 cut(s) 64
BsiSI CCGG 6 cut(s) 429, 579, 706, 745, 765, 974
BslFI GGGAC 2 cut(s) 761, 1119
BslI CCNNNNNNNGG 5 cut(s) 162, 240, 413, 540, 684
BsmAI GTCTC 1 cut(s) 995
BsmFI GGGAC 2 cut(s) 761, 1119
BsnI GGCC 5 cut(s) 509, 709, 764, 781, 821
BsoBI CYCGRG 1 cut(s) 64
Bsp1286I GDGCHC 2 cut(s) 26, 1128
Bsp143I GATC 4 cut(s) 42, 516, 575, 788
Bsp19I CCATGG 1 cut(s) 825
BspANI GGCC 5 cut(s) 509, 709, 764, 781, 821
BspCNI CTCAG 3 cut(s) 12, 868, 1105
BspFNI CGCG 1 cut(s) 134
BspLI GGNNCC 5 cut(s) 245, 304, 689, 790, 1135
BspPI GGATC 4 cut(s) 37, 570, 783, 796
BspT107I GGYRCC 1 cut(s) 302
BsrI ACTGG 2 cut(s) 208, 592
BssECI CCNNGG 4 cut(s) 161, 298, 825, 1083
BssMI GATC 4 cut(s) 42, 516, 575, 788
BssNI GRCGYC 2 cut(s) 303, 417
BssT1I CCWWGG 1 cut(s) 825
Bst2UI CCWGG 4 cut(s) 163, 541, 685, 714
Bst4CI ACNGT 2 cut(s) 88, 1087
Bst6I CTCTTC 4 cut(s) 414, 617, 948, 1113
BstACI GRCGYC 2 cut(s) 303, 417
BstBAI YACGTR 1 cut(s) 943
BstC8I GCNNGC 3 cut(s) 95, 242, 907
BstDEI CTNAG 3 cut(s) 20, 855, 1113
BstDSI CCRYGG 2 cut(s) 825, 1083
BstF5I GGATG 4 cut(s) 60, 180, 602, 892
BstFNI CGCG 1 cut(s) 134
BstH2I RGCGCY 3 cut(s) 306, 364, 373
BstHHI GCGC 3 cut(s) 305, 363, 372
BstKTI GATC 4 cut(s) 45, 519, 578, 791
BstMAI GTCTC 1 cut(s) 995
BstMBI GATC 4 cut(s) 42, 516, 575, 788
BstMCI CGRYCG 1 cut(s) 710
BstMWI GCNNNNNNNGC 7 cut(s) 246, 300, 309, 367, 369, 993, 1036
BstNI CCWGG 4 cut(s) 163, 541, 685, 714
BstSCI CCNGG 6 cut(s) 161, 539, 683, 712, 744, 972
BstSLI GKGCMC 1 cut(s) 1128
BstUI CGCG 1 cut(s) 134
BstV1I GCAGC 4 cut(s) 556, 728, 1026, 1153
BstV2I GAAGAC 3 cut(s) 412, 625, 715
BstX2I RGATCY 3 cut(s) 516, 575, 788
BstYI RGATCY 3 cut(s) 516, 575, 788
BstZI CGGCCG 1 cut(s) 707
Bsu36I CCTNAGG 2 cut(s) 855, 1113
BsuRI GGCC 5 cut(s) 509, 709, 764, 781, 821
BtgI CCRYGG 2 cut(s) 825, 1083
BtsCI GGATG 4 cut(s) 60, 180, 602, 892
BtsI GCAGTG 2 cut(s) 1003, 1016
BtsIMutI CAGTG 3 cut(s) 841, 1003, 1016
Cac8I GCNNGC 3 cut(s) 95, 242, 907
CfoI GCGC 3 cut(s) 305, 363, 372
Cfr13I GGNCC 4 cut(s) 499, 551, 779, 1133
CseI GACGC 1 cut(s) 406
Csp6I GTAC 2 cut(s) 958, 970
CviAII CATG 2 cut(s) 826, 850
CviQI GTAC 2 cut(s) 958, 970
DdeI CTNAG 3 cut(s) 20, 855, 1113
DinI GGCGCC 1 cut(s) 304
DpnI GATC 4 cut(s) 44, 518, 577, 790
DpnII GATC 4 cut(s) 42, 516, 575, 788
EaeI YGGCCR 3 cut(s) 507, 707, 762
EagI CGGCCG 1 cut(s) 707
Eam1104I CTCTTC 4 cut(s) 414, 617, 948, 1113
EarI CTCTTC 4 cut(s) 414, 617, 948, 1113
EciI GGCGGA 2 cut(s) 236, 595
Ecl136II GAGCTC 1 cut(s) 24
EclXI CGGCCG 1 cut(s) 707
Eco130I CCWWGG 1 cut(s) 825
Eco24I GRGCYC 1 cut(s) 26
Eco47I GGWCC 3 cut(s) 499, 551, 1133
Eco47III AGCGCT 1 cut(s) 362
Eco52I CGGCCG 1 cut(s) 707
Eco53kI GAGCTC 1 cut(s) 24
Eco57I CTGAAG 1 cut(s) 1091
Eco81I CCTNAGG 2 cut(s) 855, 1113
Eco88I CYCGRG 1 cut(s) 64
EcoICRI GAGCTC 1 cut(s) 24
EcoRII CCWGG 4 cut(s) 161, 539, 683, 712
EcoT14I CCWWGG 1 cut(s) 825
EcoT38I GRGCYC 1 cut(s) 26
EgeI GGCGCC 1 cut(s) 304
EheI GGCGCC 1 cut(s) 304
ErhI CCWWGG 1 cut(s) 825
FaeI CATG 2 cut(s) 829, 853
FaiI YATR 7 cut(s) 827, 851, 938, 940, 963, 1070, 1148
FaqI GGGAC 2 cut(s) 761, 1119
FatI CATG 2 cut(s) 825, 849
FauI CCCGC 1 cut(s) 404
FblI GTMKAC 1 cut(s) 489
Fnu4HI GCNGC 5 cut(s) 545, 710, 742, 1015, 1142
FokI GGATG 4 cut(s) 47, 167, 589, 899
FriOI GRGCYC 1 cut(s) 26
Fsp4HI GCNGC 5 cut(s) 545, 710, 742, 1015, 1142
GlaI GCGC 3 cut(s) 304, 362, 371
GluI GCNGC 5 cut(s) 545, 710, 742, 1015, 1142
GsuI CTGGAG 4 cut(s) 331, 706, 735, 1039
HaeII RGCGCY 3 cut(s) 306, 364, 373
HaeIII GGCC 5 cut(s) 509, 709, 764, 781, 821
HapII CCGG 6 cut(s) 429, 579, 706, 745, 765, 974
HgaI GACGC 1 cut(s) 406
HhaI GCGC 3 cut(s) 305, 363, 372
Hin1I GRCGYC 2 cut(s) 303, 417
Hin1II CATG 2 cut(s) 829, 853
Hin6I GCGC 3 cut(s) 303, 361, 370
HinP1I GCGC 3 cut(s) 303, 361, 370
HincII GTYRAC 2 cut(s) 490, 1153
HindII GTYRAC 2 cut(s) 490, 1153
HindIII AAGCTT 1 cut(s) 1072
HinfI GANTC 8 cut(s) 351, 425, 471, 530, 536, 700, 768, 1003
HpaII CCGG 6 cut(s) 429, 579, 706, 745, 765, 974
HphI GGTGA 4 cut(s) 316, 331, 1035, 1052
Hpy166II GTNNAC 2 cut(s) 490, 1153
Hpy188I TCNGA 6 cut(s) 28, 77, 470, 535, 575, 788
Hpy188III TCNNGA 7 cut(s) 13, 64, 348, 514, 697, 733, 857
Hpy8I GTNNAC 2 cut(s) 490, 1153
Hpy99I CGWCG 5 cut(s) 32, 311, 458, 461, 515
HpyAV CCTTC 5 cut(s) 136, 223, 229, 274, 1050
HpyCH4III ACNGT 2 cut(s) 88, 1087
HpyCH4IV ACGT 4 cut(s) 30, 630, 942, 1128
HpyCH4V TGCA 5 cut(s) 93, 774, 845, 1014, 1141
HpyF10VI GCNNNNNNNGC 7 cut(s) 246, 300, 309, 367, 369, 993, 1036
HpyF3I CTNAG 3 cut(s) 20, 855, 1113
HpySE526I ACGT 4 cut(s) 30, 630, 942, 1128
Hsp92I GRCGYC 2 cut(s) 303, 417
Hsp92II CATG 2 cut(s) 829, 853
HspAI GCGC 3 cut(s) 303, 361, 370
KasI GGCGCC 1 cut(s) 302
Kzo9I GATC 4 cut(s) 42, 516, 575, 788
LmnI GCTCC 5 cut(s) 29, 37, 249, 377, 687
Lsp1109I GCAGC 4 cut(s) 556, 728, 1026, 1153
LweI GCATC 3 cut(s) 189, 408, 648
MaeII ACGT 4 cut(s) 30, 630, 942, 1128
MaeIII GTNAC 1 cut(s) 31
MalI GATC 4 cut(s) 44, 518, 577, 790
MboI GATC 4 cut(s) 42, 516, 575, 788
MflI RGATCY 3 cut(s) 516, 575, 788
MhlI GDGCHC 2 cut(s) 26, 1128
MluCI AATT 1 cut(s) 583
Mly113I GGCGCC 1 cut(s) 303
MlyI GAGTC 4 cut(s) 419, 524, 694, 997
MmeI TCCRAC 2 cut(s) 51, 258
MseI TTAA 2 cut(s) 798, 948
MspA1I CMGCKG 2 cut(s) 240, 1017
MspI CCGG 6 cut(s) 429, 579, 706, 745, 765, 974
MspR9I CCNGG 6 cut(s) 163, 541, 685, 714, 746, 974
MvaI CCWGG 4 cut(s) 163, 541, 685, 714
MvnI CGCG 1 cut(s) 134
MwoI GCNNNNNNNGC 7 cut(s) 246, 300, 309, 367, 369, 993, 1036
NarI GGCGCC 1 cut(s) 303
NciI CCSGG 2 cut(s) 746, 974
NcoI CCATGG 1 cut(s) 825
NdeII GATC 4 cut(s) 42, 516, 575, 788
NlaIII CATG 2 cut(s) 829, 853
NlaIV GGNNCC 5 cut(s) 245, 304, 689, 790, 1135
NmeAIII GCCGAG 2 cut(s) 279, 393
PcsI WCGNNNNNNNCGW 3 cut(s) 11, 420, 1134
PfeI GAWTC 4 cut(s) 351, 471, 536, 768
PflMI CCANNNNNTGG 2 cut(s) 240, 684
PkrI GCNGC 5 cut(s) 546, 711, 743, 1016, 1143
PleI GAGTC 4 cut(s) 419, 524, 694, 997
PluTI GGCGCC 1 cut(s) 306
PpsI GAGTC 4 cut(s) 419, 524, 694, 997
Ppu21I YACGTR 1 cut(s) 943
PsiI TTATAA 1 cut(s) 1070
Psp124BI GAGCTC 1 cut(s) 26
Psp6I CCWGG 4 cut(s) 161, 539, 683, 712
PspGI CCWGG 4 cut(s) 161, 539, 683, 712
PspN4I GGNNCC 5 cut(s) 245, 304, 689, 790, 1135
PspPI GGNCC 4 cut(s) 499, 551, 779, 1133
PsuI RGATCY 3 cut(s) 516, 575, 788
PvuII CAGCTG 1 cut(s) 1017
RsaI GTAC 2 cut(s) 959, 971
RsaNI GTAC 2 cut(s) 958, 970
SacI GAGCTC 1 cut(s) 26
SalI GTCGAC 1 cut(s) 488
SaqAI TTAA 2 cut(s) 798, 948
SatI GCNGC 5 cut(s) 545, 710, 742, 1015, 1142
Sau3AI GATC 4 cut(s) 42, 516, 575, 788
Sau96I GGNCC 4 cut(s) 499, 551, 779, 1133
SchI GAGTC 4 cut(s) 419, 524, 694, 997
ScrFI CCNGG 6 cut(s) 163, 541, 685, 714, 746, 974
SduI GDGCHC 2 cut(s) 26, 1128
SfaNI GCATC 3 cut(s) 189, 408, 648
SfoI GGCGCC 1 cut(s) 304
SinI GGWCC 3 cut(s) 499, 551, 1133
SmlI CTYRAG 1 cut(s) 356
SmoI CTYRAG 1 cut(s) 356
Sse9I AATT 1 cut(s) 583
SspDI GGCGCC 1 cut(s) 302
SstI GAGCTC 1 cut(s) 26
StyD4I CCNGG 6 cut(s) 161, 539, 683, 712, 744, 972
StyI CCWWGG 1 cut(s) 825
TaaI ACNGT 2 cut(s) 88, 1087
TaiI ACGT 4 cut(s) 33, 633, 945, 1131
TaqI TCGA 6 cut(s) 222, 423, 489, 495, 513, 813
TaqII GACCGA 1 cut(s) 539
TasI AATT 1 cut(s) 583
TauI GCSGC 1 cut(s) 712
TfiI GAWTC 4 cut(s) 351, 471, 536, 768
Tru1I TTAA 2 cut(s) 798, 948
Tru9I TTAA 2 cut(s) 798, 948
TscAI CASTG 3 cut(s) 841, 1003, 1016
TseI GCWGC 4 cut(s) 544, 741, 1014, 1141
TspDTI ATGAA 5 cut(s) 439, 463, 643, 648, 966
TspGWI ACGGA 2 cut(s) 20, 50
TspRI CASTG 3 cut(s) 841, 1003, 1016
Van91I CCANNNNNTGG 2 cut(s) 240, 684
VpaK11BI GGWCC 3 cut(s) 499, 551, 1133
XmiI GTMKAC 1 cut(s) 489
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.