RLG00000012669

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
21099258 .. 21101534
2277 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012669

Sequence Viewer

Length: 1161 bp
ATGACGGAAATCACCAACCTGAGCTCCGACGTGACGGAGCTGATCCTCTCCTACCTCCCCATCCCGACCCTCGTCCGAGCCTCCACCGTCTGCAAGCTCTGGCAATCCATCATCTCCTCCACCACCTTCTCCGCCACCCAAACCCAAACCCAAACCCAATCCCAATCCCACCCCTGGTTCTTCCTCTACGGCATCCACAACACCTCCTCCAAGAACAACCAGTCCTTCGCCTTCGACCCTCTCTCCAACCGCTGGCTCCGCCTCCCCACCCCCACCTTCCCTCCCCACCACTACTCCCACTCCTGCTTCCTCGGCGCCGACGGCTTCTTCCTCATCACCGCCCCCAACTTCACCTACTCCAGAATCCTCAAGCGCTCTTGGCGCTCCACCTCGCCTCTCCACTTCTCCCGCATCAACCCTCTTCTCGGCGTTTTCGACTCCGGCTCTCTCCAACCCAACTTCATCGTCGTCGGCGGTGTCAGATTCATCGGCAACTTGGTCGACATCGAGGACCGCTTGGCCGTCGAGATCTACAGCCCCGACTCCGATTCCTGGCAGCTCCGTCCTCCTCTCCCTGCTGATTTCAGATCCGGCAATTCCTCCCAGTCCTTGTCATCCGCCCTCTTCAAAGGGAGGTTCTACGTCTTCGGCATCTATTCGTGCTTCATTTCATCTTTTGATCTACACACCAATGCTTGGAGCCAAGTCCAGACTCTCCGCCCGCCTGGAGTTGTCTTCTCTTTCTTGATTGGCTGCCGGGACAGGCTGGTTCTGGCCGGAATCTGCAACGGGCCTCTCGGGTCCTCCTTTAATCTGTGGAGGATCGAGGAGGCCACCATGGAGTTCAGTGAGATTGCAATCATGCCTCAGGACTTGCTGTGTAGCTTGTTTGAGGGGGATGAGGAGGATAAGTTTGCGAGCTTGAAATGTGTGGGCTTGGGAAATCTTATATACGTGTTTAATGAAGAGTACCATAAGAAGTACCCGGCTTGTGTTTGCGAGATTAGCAGTGAGACTGGGCAGTGTAGCTGGAGGAGAGTGCCTCCGTTGAGGAAGAGGGAGACGTTGGTCCCGTGCAGCCTATGGTTGACTGATTCCATTGTCTGTGCAGTCCACACAAGCAAGATTCAACTATGTGGTCTGGAAAACAAGTTTCATTGA

Protein Analysis

387

Amino Acids

43.51

Weight (kDa)

6.78

Isoelectric Point (pI)

58.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 4 - 41 2.5e-08 F-box domain
F-box-like PF12937 10 - 41 6.1e-07 F-box-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 314
AccB7I CCANNNNNTGG 2 cut(s) 252, 696
AccI GTMKAC 1 cut(s) 501
AclWI GGATC 3 cut(s) 37, 582, 830
AcoI YGGCCR 2 cut(s) 519, 774
AcyI GRCGYC 1 cut(s) 315
AfaI GTAC 2 cut(s) 971, 983
AfeI AGCGCT 1 cut(s) 374
AfiI CCNNNNNNNGG 5 cut(s) 174, 252, 425, 552, 696
AflIII ACRYGT 1 cut(s) 954
AgsI TTSAA 3 cut(s) 628, 925, 1130
AjiI CACGTC 1 cut(s) 31
AjnI CCWGG 3 cut(s) 173, 551, 724
AloI GAACNNNNNNTCC 2 cut(s) 206, 238
AluBI AGCT 7 cut(s) 24, 40, 97, 559, 885, 921, 1029
AluI AGCT 7 cut(s) 24, 40, 97, 559, 885, 921, 1029
Alw21I GWGCWC 1 cut(s) 26
Alw26I GTCTC 2 cut(s) 1007, 1055
AlwI GGATC 3 cut(s) 37, 582, 830
Ama87I CYCGRG 1 cut(s) 797
Aor51HI AGCGCT 1 cut(s) 374
AoxI GGCC 4 cut(s) 519, 774, 791, 831
ApeKI GCWGC 3 cut(s) 556, 753, 1077
AspLEI GCGC 3 cut(s) 317, 375, 384
AspS9I GGNCC 4 cut(s) 511, 791, 801, 1069
AsuC2I CCSGG 2 cut(s) 758, 986
AsuHPI GGTGA 3 cut(s) 4, 328, 343
AvaI CYCGRG 1 cut(s) 797
AvaII GGWCC 3 cut(s) 511, 801, 1069
AxyI CCTNAGG 1 cut(s) 867
BanI GGYRCC 1 cut(s) 314
BanII GRGCYC 1 cut(s) 26
BbsI GAAGAC 2 cut(s) 637, 727
Bbv12I GWGCWC 1 cut(s) 26
BbvI GCAGC 3 cut(s) 568, 740, 1089
BccI CCATC 2 cut(s) 68, 116
BceAI ACGGC 3 cut(s) 205, 337, 506
BcgI CGANNNNNNTGC 2 cut(s) 481, 515
BciT130I CCWGG 3 cut(s) 175, 553, 726
BcnI CCSGG 2 cut(s) 758, 986
BcoDI GTCTC 2 cut(s) 1007, 1055
BfmI CTRYAG 1 cut(s) 532
BfoI RGCGCY 3 cut(s) 318, 376, 385
BglII AGATCT 1 cut(s) 528
BisI GCNGC 3 cut(s) 557, 754, 1078
BlsI GCNGC 3 cut(s) 558, 755, 1079
Bme1390I CCNGG 5 cut(s) 175, 553, 726, 758, 986
Bme18I GGWCC 3 cut(s) 511, 801, 1069
BmeT110I CYCGRG 1 cut(s) 797
BmgBI CACGTC 1 cut(s) 31
BmgT120I GGNCC 4 cut(s) 511, 791, 801, 1069
BmiI GGNNCC 5 cut(s) 257, 316, 701, 802, 1071
BmrFI CCNGG 5 cut(s) 175, 553, 726, 758, 986
BmrI ACTGGG 2 cut(s) 598, 1026
BmsI GCATC 3 cut(s) 201, 420, 660
BmuI ACTGGG 2 cut(s) 598, 1026
BoxI GACNNNNGTC 2 cut(s) 71, 1067
BpiI GAAGAC 2 cut(s) 637, 727
BplI GAGNNNNNCTC 2 cut(s) 1027, 1059
BpmI CTGGAG 3 cut(s) 343, 747, 1051
Bpu10I CCTNAGC 1 cut(s) 20
BpuEI CTTGAG 1 cut(s) 353
BpuMI CCSGG 2 cut(s) 758, 986
BsaAI YACGTR 1 cut(s) 955
BsaBI GATNNNNATC 1 cut(s) 857
BsaHI GRCGYC 1 cut(s) 315
BsaJI CCNNGG 3 cut(s) 173, 310, 837
Bsc4I CCNNNNNNNGG 5 cut(s) 174, 252, 425, 552, 696
Bse1I ACTGG 3 cut(s) 220, 604, 1021
Bse21I CCTNAGG 1 cut(s) 867
Bse8I GATNNNNATC 1 cut(s) 857
BseBI CCWGG 3 cut(s) 175, 553, 726
BseDI CCNNGG 3 cut(s) 173, 310, 837
BseGI GGATG 4 cut(s) 60, 192, 614, 904
BseJI GATNNNNATC 1 cut(s) 857
BseLI CCNNNNNNNGG 5 cut(s) 174, 252, 425, 552, 696
BseMII CTCAG 2 cut(s) 11, 881
BseNI ACTGG 3 cut(s) 220, 604, 1021
BseRI GAGGAG 6 cut(s) 106, 196, 558, 842, 917, 1048
BseXI GCAGC 3 cut(s) 568, 740, 1089
BsgI GTGCAG 2 cut(s) 1096, 1128
BshFI GGCC 4 cut(s) 521, 776, 793, 833
BshNI GGYRCC 1 cut(s) 314
BsiHKAI GWGCWC 1 cut(s) 26
BsiHKCI CYCGRG 1 cut(s) 797
BsiSI CCGG 5 cut(s) 441, 591, 757, 777, 986
BslFI GGGAC 2 cut(s) 773, 1055
BslI CCNNNNNNNGG 5 cut(s) 174, 252, 425, 552, 696
BsmAI GTCTC 2 cut(s) 1007, 1055
BsmBI CGTCTC 1 cut(s) 1055
BsmFI GGGAC 2 cut(s) 773, 1055
BsnI GGCC 4 cut(s) 521, 776, 793, 833
BsoBI CYCGRG 1 cut(s) 797
Bsp1286I GDGCHC 1 cut(s) 26
Bsp143I GATC 5 cut(s) 42, 528, 587, 679, 822
Bsp19I CCATGG 1 cut(s) 837
BspANI GGCC 4 cut(s) 521, 776, 793, 833
BspCNI CTCAG 2 cut(s) 12, 880
BspLI GGNNCC 5 cut(s) 257, 316, 701, 802, 1071
BspPI GGATC 3 cut(s) 37, 582, 830
BspT107I GGYRCC 1 cut(s) 314
BsrI ACTGG 3 cut(s) 220, 604, 1021
BssECI CCNNGG 3 cut(s) 173, 310, 837
BssMI GATC 5 cut(s) 42, 528, 587, 679, 822
BssNI GRCGYC 1 cut(s) 315
BssT1I CCWWGG 1 cut(s) 837
Bst2UI CCWGG 3 cut(s) 175, 553, 726
Bst4CI ACNGT 1 cut(s) 88
Bst6I CTCTTC 4 cut(s) 426, 629, 960, 1049
BstACI GRCGYC 1 cut(s) 315
BstBAI YACGTR 1 cut(s) 955
BstC8I GCNNGC 4 cut(s) 95, 254, 722, 919
BstDEI CTNAG 2 cut(s) 20, 867
BstDSI CCRYGG 1 cut(s) 837
BstF5I GGATG 4 cut(s) 60, 192, 614, 904
BstH2I RGCGCY 3 cut(s) 318, 376, 385
BstHHI GCGC 3 cut(s) 317, 375, 384
BstKTI GATC 5 cut(s) 45, 531, 590, 682, 825
BstMAI GTCTC 2 cut(s) 1007, 1055
BstMBI GATC 5 cut(s) 42, 528, 587, 679, 822
BstMWI GCNNNNNNNGC 6 cut(s) 258, 312, 321, 379, 381, 1005
BstNI CCWGG 3 cut(s) 175, 553, 726
BstPAI GACNNNNGTC 2 cut(s) 71, 1067
BstSCI CCNGG 5 cut(s) 173, 551, 724, 756, 984
BstSFI CTRYAG 1 cut(s) 532
BstV1I GCAGC 3 cut(s) 568, 740, 1089
BstV2I GAAGAC 2 cut(s) 637, 727
BstX2I RGATCY 2 cut(s) 528, 587
BstYI RGATCY 2 cut(s) 528, 587
Bsu36I CCTNAGG 1 cut(s) 867
BsuRI GGCC 4 cut(s) 521, 776, 793, 833
BtgI CCRYGG 1 cut(s) 837
BtrI CACGTC 1 cut(s) 31
BtsCI GGATG 4 cut(s) 60, 192, 614, 904
BtsI GCAGTG 2 cut(s) 1015, 1028
BtsIMutI CAGTG 3 cut(s) 853, 1015, 1028
Cac8I GCNNGC 4 cut(s) 95, 254, 722, 919
CfoI GCGC 3 cut(s) 317, 375, 384
Cfr13I GGNCC 4 cut(s) 511, 791, 801, 1069
Csp6I GTAC 2 cut(s) 970, 982
CviAII CATG 2 cut(s) 838, 862
CviQI GTAC 2 cut(s) 970, 982
DdeI CTNAG 2 cut(s) 20, 867
DinI GGCGCC 1 cut(s) 316
DpnI GATC 5 cut(s) 44, 530, 589, 681, 824
DpnII GATC 5 cut(s) 42, 528, 587, 679, 822
EaeI YGGCCR 2 cut(s) 519, 774
Eam1104I CTCTTC 4 cut(s) 426, 629, 960, 1049
EarI CTCTTC 4 cut(s) 426, 629, 960, 1049
EciI GGCGGA 4 cut(s) 121, 248, 607, 707
Ecl136II GAGCTC 1 cut(s) 24
Eco130I CCWWGG 1 cut(s) 837
Eco24I GRGCYC 1 cut(s) 26
Eco47I GGWCC 3 cut(s) 511, 801, 1069
Eco47III AGCGCT 1 cut(s) 374
Eco53kI GAGCTC 1 cut(s) 24
Eco81I CCTNAGG 1 cut(s) 867
Eco88I CYCGRG 1 cut(s) 797
EcoICRI GAGCTC 1 cut(s) 24
EcoO109I RGGNCCY 1 cut(s) 801
EcoRII CCWGG 3 cut(s) 173, 551, 724
EcoT14I CCWWGG 1 cut(s) 837
EcoT38I GRGCYC 1 cut(s) 26
EgeI GGCGCC 1 cut(s) 316
EheI GGCGCC 1 cut(s) 316
ErhI CCWWGG 1 cut(s) 837
Esp3I CGTCTC 1 cut(s) 1055
FaeI CATG 2 cut(s) 841, 865
FaiI YATR 7 cut(s) 839, 863, 950, 952, 975, 1084, 1135
FaqI GGGAC 2 cut(s) 773, 1055
FatI CATG 2 cut(s) 837, 861
FauI CCCGC 2 cut(s) 416, 729
FblI GTMKAC 1 cut(s) 501
Fnu4HI GCNGC 3 cut(s) 557, 754, 1078
FokI GGATG 4 cut(s) 47, 179, 601, 911
FriOI GRGCYC 1 cut(s) 26
Fsp4HI GCNGC 3 cut(s) 557, 754, 1078
GlaI GCGC 3 cut(s) 316, 374, 383
GluI GCNGC 3 cut(s) 557, 754, 1078
GsuI CTGGAG 3 cut(s) 343, 747, 1051
HaeII RGCGCY 3 cut(s) 318, 376, 385
HaeIII GGCC 4 cut(s) 521, 776, 793, 833
HapII CCGG 5 cut(s) 441, 591, 757, 777, 986
HhaI GCGC 3 cut(s) 317, 375, 384
Hin1I GRCGYC 1 cut(s) 315
Hin1II CATG 2 cut(s) 841, 865
Hin6I GCGC 3 cut(s) 315, 373, 382
HinP1I GCGC 3 cut(s) 315, 373, 382
HincII GTYRAC 2 cut(s) 502, 1089
HindII GTYRAC 2 cut(s) 502, 1089
HinfI GANTC 9 cut(s) 363, 437, 483, 542, 548, 712, 780, 1094, 1126
HpaII CCGG 5 cut(s) 441, 591, 757, 777, 986
HphI GGTGA 3 cut(s) 4, 328, 343
Hpy166II GTNNAC 3 cut(s) 502, 1089, 1114
Hpy188I TCNGA 5 cut(s) 28, 77, 482, 547, 587
Hpy188III TCNNGA 7 cut(s) 64, 360, 526, 709, 745, 869, 1142
Hpy8I GTNNAC 3 cut(s) 502, 1089, 1114
Hpy99I CGWCG 5 cut(s) 32, 323, 470, 473, 527
HpyAV CCTTC 4 cut(s) 136, 235, 241, 286
HpyCH4III ACNGT 1 cut(s) 88
HpyCH4IV ACGT 4 cut(s) 30, 642, 954, 1064
HpyCH4V TGCA 5 cut(s) 93, 786, 857, 1077, 1109
HpyF10VI GCNNNNNNNGC 6 cut(s) 258, 312, 321, 379, 381, 1005
HpyF3I CTNAG 2 cut(s) 20, 867
HpySE526I ACGT 4 cut(s) 30, 642, 954, 1064
Hsp92I GRCGYC 1 cut(s) 315
Hsp92II CATG 2 cut(s) 841, 865
HspAI GCGC 3 cut(s) 315, 373, 382
KasI GGCGCC 1 cut(s) 314
Kzo9I GATC 5 cut(s) 42, 528, 587, 679, 822
LmnI GCTCC 6 cut(s) 29, 37, 261, 389, 564, 699
Lsp1109I GCAGC 3 cut(s) 568, 740, 1089
LweI GCATC 3 cut(s) 201, 420, 660
MaeII ACGT 4 cut(s) 30, 642, 954, 1064
MaeIII GTNAC 1 cut(s) 31
MalI GATC 5 cut(s) 44, 530, 589, 681, 824
MboI GATC 5 cut(s) 42, 528, 587, 679, 822
MboII GAAGA 8 cut(s) 172, 319, 413, 616, 637, 727, 977, 1066
MflI RGATCY 2 cut(s) 528, 587
MhlI GDGCHC 1 cut(s) 26
MluCI AATT 1 cut(s) 595
Mly113I GGCGCC 1 cut(s) 315
MlyI GAGTC 3 cut(s) 431, 536, 706
MmeI TCCRAC 3 cut(s) 51, 270, 475
MseI TTAA 2 cut(s) 810, 960
MslI CAYNNNNRTG 1 cut(s) 690
MspA1I CMGCKG 1 cut(s) 252
MspI CCGG 5 cut(s) 441, 591, 757, 777, 986
MspR9I CCNGG 5 cut(s) 175, 553, 726, 758, 986
MvaI CCWGG 3 cut(s) 175, 553, 726
MwoI GCNNNNNNNGC 6 cut(s) 258, 312, 321, 379, 381, 1005
NarI GGCGCC 1 cut(s) 315
NciI CCSGG 2 cut(s) 758, 986
NcoI CCATGG 1 cut(s) 837
NdeII GATC 5 cut(s) 42, 528, 587, 679, 822
NlaIII CATG 2 cut(s) 841, 865
NlaIV GGNNCC 5 cut(s) 257, 316, 701, 802, 1071
NmeAIII GCCGAG 2 cut(s) 291, 405
NmuCI GTSAC 1 cut(s) 31
PcsI WCGNNNNNNNCGW 2 cut(s) 432, 1070
PfeI GAWTC 6 cut(s) 363, 483, 548, 780, 1094, 1126
PflMI CCANNNNNTGG 2 cut(s) 252, 696
PkrI GCNGC 3 cut(s) 558, 755, 1079
PleI GAGTC 3 cut(s) 431, 536, 706
PluTI GGCGCC 1 cut(s) 318
PpsI GAGTC 3 cut(s) 431, 536, 706
Ppu21I YACGTR 1 cut(s) 955
PpuMI RGGWCCY 1 cut(s) 801
PshAI GACNNNNGTC 2 cut(s) 71, 1067
Psp124BI GAGCTC 1 cut(s) 26
Psp5II RGGWCCY 1 cut(s) 801
Psp6I CCWGG 3 cut(s) 173, 551, 724
PspGI CCWGG 3 cut(s) 173, 551, 724
PspN4I GGNNCC 5 cut(s) 257, 316, 701, 802, 1071
PspPI GGNCC 4 cut(s) 511, 791, 801, 1069
PspPPI RGGWCCY 1 cut(s) 801
PsuI RGATCY 2 cut(s) 528, 587
RsaI GTAC 2 cut(s) 971, 983
RsaNI GTAC 2 cut(s) 970, 982
RseI CAYNNNNRTG 1 cut(s) 690
SacI GAGCTC 1 cut(s) 26
SalI GTCGAC 1 cut(s) 500
SaqAI TTAA 2 cut(s) 810, 960
SatI GCNGC 3 cut(s) 557, 754, 1078
Sau3AI GATC 5 cut(s) 42, 528, 587, 679, 822
Sau96I GGNCC 4 cut(s) 511, 791, 801, 1069
SchI GAGTC 3 cut(s) 431, 536, 706
ScrFI CCNGG 5 cut(s) 175, 553, 726, 758, 986
SduI GDGCHC 1 cut(s) 26
SfaNI GCATC 3 cut(s) 201, 420, 660
SfcI CTRYAG 1 cut(s) 532
SfoI GGCGCC 1 cut(s) 316
SinI GGWCC 3 cut(s) 511, 801, 1069
SmiMI CAYNNNNRTG 1 cut(s) 690
SmlI CTYRAG 1 cut(s) 368
SmoI CTYRAG 1 cut(s) 368
Sse9I AATT 1 cut(s) 595
SspDI GGCGCC 1 cut(s) 314
SstI GAGCTC 1 cut(s) 26
StyD4I CCNGG 5 cut(s) 173, 551, 724, 756, 984
StyI CCWWGG 1 cut(s) 837
TaaI ACNGT 1 cut(s) 88
TaiI ACGT 4 cut(s) 33, 645, 957, 1067
TaqI TCGA 6 cut(s) 234, 435, 501, 507, 525, 825
TasI AATT 1 cut(s) 595
TfiI GAWTC 6 cut(s) 363, 483, 548, 780, 1094, 1126
Tru1I TTAA 2 cut(s) 810, 960
Tru9I TTAA 2 cut(s) 810, 960
TscAI CASTG 3 cut(s) 853, 1015, 1028
TseFI GTSAC 1 cut(s) 31
TseI GCWGC 3 cut(s) 556, 753, 1077
Tsp45I GTSAC 1 cut(s) 31
TspDTI ATGAA 6 cut(s) 451, 475, 655, 660, 978, 1145
TspGWI ACGGA 4 cut(s) 20, 50, 551, 1035
TspRI CASTG 3 cut(s) 853, 1015, 1028
Van91I CCANNNNNTGG 2 cut(s) 252, 696
VpaK11BI GGWCC 3 cut(s) 511, 801, 1069
XmiI GTMKAC 1 cut(s) 501
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.