FvH4_2g23980

mediator of RNA polymerase II transcription subunit

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
19588797 .. 19599275
10479 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g23980.t3

Sequence Viewer

Length: 3168 bp
ATGGCGGTGGTGCCCTTACAGCAGCAGCCGAGTCACCTATGGGACTCGGTCCTCCATCTCACCAAGTCAGCTCAGGACAAGAACAGCGATCCGCTCCTTTGGGCCCTCCAGCTCAGCTCCAGCCTCAACTCCGCCGCCGTGTCCTTGCCGTCCGTCGAGCTCGCGCATCTCCTCGTCTCCCATATCTGCTGGGCCAATCACGTGCCGATCACCTGGAAGTTCCTCGAGAAGGCTCTCACCGTTAAGATCGTCCCTCCCATGCTCGTCCTCGCTCTTCTCTCCACCAAGGTTGTTCCAAATCGACTTGTTCACCCTGCAGCATATAGGCTTTATATGGAACTTCTTAAGAGGCATACAGTTTTATTTGCTTCTCAATTGAATGGACCGAACTTTCAGAAGATTATGAGATCCATTGATGATGTTCTGCAACTTTCACAACAATATGGTTTTCCAGTGTGTGAACCTGGAGTTCTTCTTGTTGAGTTTGTCTTTTCAATCATATGGCAATTACTTGATGCATCATTAGATGATGAACGTTTGCTCGAACTTACTCCAGACAAGAGCTCAAGATGGCCTATTAGGTCACAAGATATGGAAATAGATGGTCCTGATAGTTTTAATGAAAAGAGAAGTGAGCAAAATGAAGGCATGAAAAAAGCAAATACTGCAATGGCTATCGAGATAATTGTCGAGTTTCTTCAGAACAAAGTAACTTCAAGGATTTTGTACTTGGCACGTCGGAATATGCCATCACATTGGGGAGGTTTCATTCAGCGACTGCAAGTGCTCGGGGCACACTCGTCAGTTTTGCGGACTTTGAAACATATAACTCCAGAGTCCCTTCTACAGCTGACATCTGATTCACGTCGGCTTTTGACTCGAGAAGGCAAAACAATTTCAAGGCAAGAATTTCATGCAGTATTATCTTTCGGATCGCTGATGTCCTCTGCTTGTCAATCACATGGAGCTACTTCGTCTGCCTTTTGGCTTCCTATTGACCTCTTTCTCGAAGATGCTATGGATGGGTCAGAAGCAACAGGAACTAGTGCCATTGAAACACTTGCTGGTTTGGTAAAGGCTCTGCAGGCAATTAATGGGACTACATGGCACAATGCATTTTTAGGGTTATGGATTGCAGCTCTGCGTCTTATTCAAAGGGAAAGGGATCCCAGGGAAGGACCTATTCCTCGCCTTGATACCTGCTTATGCATGCTACTGTCTATAACAACACTTGCCGTTACAAATATTATTGAAGAAGAGGAAGCTGAACTGCTAAAGGAAACTGAAAGTGACCCGTCTAACCAAGGGAAGGAAAAACAGGCTATGGGAAAGCGTCGCAGGGATTTAATTACCTGCTTACAGCAATTGGGTGATCAGGATGCCTTATTAACGGCACCTCAGTCTGTTTGTTCCGTGGCCAATCAAGCTGCTGCCAAGGCGATGATGTTAAGATCAGGCCTGTCAGTCACTAATGGTTACTATGAATCTATTAGTGTGAACGACATGCCAATAAATTGTACGGGAAATCTGCGGCATTTAATTGTTGAGGCTTGTATTGCTCGGAACCTACTAGACACATCAGCATATTTCTGGCCAGGTTATGTGCGCAGCAGCAACCAAGTACTGCGTAATGTGTCTGGCCAAGTGCCTGGTTGGTCTTCATTAATGAAAGGGTCTCCTCTAACCACTCCATCAATGGTTAATGCTTTGGTTACAACTCCAGCTTCTAGCTTAGCAGAGATCGAGAAAATGTATGAGATTGCAGTCAATGGTTCAGATGAAGAGAAGATATCTGCTGCTACCATTCTTTGTGGGGCTTCTCTAGTTCGTGGTTGGAATATACAGGAGCACACCTGTCTTTTCATTATAAGGCTGCTATCCCCTCCAGTTCCTGCAGATTACTCAGGGAGTGATAGCCATTTGATCAGCTATGCTTCATTCTTTAATGTTCTTCTGGTTGGGGTATCGTCTATAGATACTGTTCAAATATTCTCCTTACTTGGATTGGTTCCACTACTTGCATCTGCAGTAATGCCCATTTGTGAAGTTTTTGGATCGAGTGTTCCCAATCTCTCATGGGCTCCTACAACAGGGGAAGAGCTCTCATGTCATGCAGTTTTCTCCAGTGCTTTTACACTTCTATTGAGGTTATGGAGATTTGATCACCCACCTCTTGAACACATGATGGGGGACTTGCCGACTGTGGGTACCCAAGTTGGTCCAGAATACCTCTTGGTGCTTCGAAACACTCGATTATCATCCTTTGGTACTTCAGCAGTGGATCGAATTAAAAGTAGAAGAGTTTCCAAATTTATAACCTTTTCTTCAGATCCCATTACTATGGATTCCTTTCCAAAATTGAAACTCTGGTACCAGCAGCATCAAAAATGTATTTGTTCCACCCTCTCTGGGCTTGTATCTGGGACTCCTGTTCATCAGATTGTTGATGCCCTGCTGACCATGATGTTCAGAAAAATAAACAGAAGCAGTCACCCTGTGACTCCTGCAACTTCAGGGAGCAGTAATTCTTCTGCATCAGGAACTGATGAGTCCTCTATTAGAATCAAGGTGCCAGCATGGGACATCCTTGAAGCAACTCCATTTGTGCTTGATGCTGCTCTTACTGCTTGTGCCCATGGAAGACTTTCTCCCCGTGAGCTGGCTACAGGACTGAAAGATCTTGCTGATTATCTGCCAGCAACTTTGGCGACCATGGTCAGCTATTTTTCAGCTGAAGTAACACGGGGAATATGGAAGCCAGCGTTTATGAATGGAACTGATTGGCCAAGCCCTGCCGCAAATTTATCCATTGTTGAGCAGCAGATAAAGAAAATCCTAGCTGCCACTGGTGTTGATATGCCTAGCCTTGCAGTTGGTGGAAACGCTCCAGCTACGCTTCCTTTACCCTTTGCTGCTCTCATTAGTCTCACAATAACATATAAACTTGATAAAGCTTCTGAACGCGCCCTCACCCTGATCGGTCCTGCCTTGAATGCTCTGGCTGCTGGTTGCCCTTGGCCATGCATGCCTATCCTAGCCTCATTATGGGCCCAGAAGCAATGGTGGTGTGGGTGCCCTCCTTGGCCATGGCTTTGGTTCCCATTTCTCTGGTGGGATCACTCCAGTTGCCCCTGGAATTCTGTATTTGCGTGTGCATCGTTCTGTTAG

Protein Analysis

1056

Amino Acids

115.93

Weight (kDa)

6.4

Isoelectric Point (pI)

51.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011732)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1868, 2315
Acc16I TGCGCA 1 cut(s) 1607
Acc36I ACCTGC 2 cut(s) 1208, 1361
Acc65I GGTACC 2 cut(s) 2207, 2370
AccB1I GGYRCC 6 cut(s) 10, 1393, 2207, 2370, 2569, 3072
AccBSI CCGCTC 1 cut(s) 94
AccII CGCG 2 cut(s) 164, 2964
AciI CCGC 7 cut(s) 5, 92, 132, 135, 811, 1531, 2796
AclI AACGTT 1 cut(s) 535
AclWI GGATC 9 cut(s) 83, 402, 940, 1160, 1173, 2062, 2289, 2324, 3123
AcoI YGGCCR 6 cut(s) 1416, 1592, 1639, 2783, 3017, 3083
AcsI RAATTY 4 cut(s) 908, 2309, 2800, 3136
AcuI CTGAAG 5 cut(s) 683, 2256, 2310, 2496, 2754
AcvI CACGTG 1 cut(s) 202
AdeI CACNNNGTG 1 cut(s) 2497
AfaI GTAC 6 cut(s) 728, 1519, 1623, 2209, 2269, 2372
AfiI CCNNNNNNNGG 8 cut(s) 229, 1175, 1309, 2090, 2204, 2409, 2659, 3045
AflII CTTAAG 1 cut(s) 344
AhlI ACTAGT 1 cut(s) 1043
AjiI CACGTC 2 cut(s) 737, 866
AjnI CCWGG 6 cut(s) 212, 463, 1169, 1594, 1648, 3131
AloI GAACNNNNNNTCC 2 cut(s) 2046, 2078
Alw21I GWGCWC 5 cut(s) 162, 566, 789, 1851, 2103
Alw26I GTCTC 3 cut(s) 181, 1680, 2930
AlwI GGATC 9 cut(s) 83, 402, 940, 1160, 1173, 2062, 2289, 2324, 3123
AlwNI CAGNNNCTG 3 cut(s) 778, 1892, 2543
Ama87I CYCGRG 3 cut(s) 224, 788, 879
ApaI GGGCCC 2 cut(s) 106, 3052
ApoI RAATTY 4 cut(s) 908, 2309, 2800, 3136
AseI ATTAAT 2 cut(s) 1092, 1664
Asp700I GAANNNNTTC 2 cut(s) 2302, 2644
Asp718I GGTACC 2 cut(s) 2207, 2370
AspLEI GCGC 3 cut(s) 166, 1608, 2966
AsuHPI GGTGA 9 cut(s) 26, 52, 202, 229, 302, 1382, 2156, 2483, 2962
AsuII TTCGAA 1 cut(s) 2242
AvaI CYCGRG 3 cut(s) 224, 788, 879
AvaII GGWCC 6 cut(s) 49, 383, 605, 1178, 2219, 2981
BaeGI GKGCMC 6 cut(s) 15, 106, 796, 2635, 3052, 3077
BaeI ACNNNNGTAYC 4 cut(s) 2199, 2232, 2354, 2387
BalI TGGCCA 6 cut(s) 1418, 1594, 1641, 2785, 3019, 3085
BamHI GGATCC 1 cut(s) 1165
BanI GGYRCC 6 cut(s) 10, 1393, 2207, 2370, 2569, 3072
BanII GRGCYC 6 cut(s) 106, 162, 566, 2083, 2103, 3052
BbrPI CACGTG 1 cut(s) 202
BbsI GAAGAC 2 cut(s) 1650, 2647
Bbv12I GWGCWC 5 cut(s) 162, 566, 789, 1851, 2103
BccI CCATC 7 cut(s) 63, 564, 596, 757, 1016, 1699, 2179
BceAI ACGGC 4 cut(s) 122, 133, 1220, 1407
BciT130I CCWGG 6 cut(s) 214, 465, 1171, 1596, 1650, 3133
BclI TGATCA 3 cut(s) 1372, 1923, 2161
BcoDI GTCTC 3 cut(s) 181, 1680, 2930
BcuI ACTAGT 1 cut(s) 1043
BfaI CTAG 7 cut(s) 1044, 1571, 1728, 1823, 2837, 2862, 3035
BfmI CTRYAG 7 cut(s) 315, 845, 1082, 1893, 1971, 2025, 2664
BfrI CTTAAG 1 cut(s) 344
BfuAI ACCTGC 2 cut(s) 1208, 1361
BglII AGATCT 1 cut(s) 2677
BlpI GCTNAGC 2 cut(s) 113, 1732
BmcAI AGTACT 1 cut(s) 1623
Bme1390I CCNGG 6 cut(s) 214, 465, 1171, 1596, 1650, 3133
Bme18I GGWCC 6 cut(s) 49, 383, 605, 1178, 2219, 2981
BmeT110I CYCGRG 3 cut(s) 224, 788, 879
BmgBI CACGTC 2 cut(s) 737, 866
BmrFI CCNGG 6 cut(s) 214, 465, 1171, 1596, 1650, 3133
BoxI GACNNNNGTC 1 cut(s) 2714
BpiI GAAGAC 2 cut(s) 1650, 2647
Bpu10I CCTNAGC 1 cut(s) 72
Bpu1102I GCTNAGC 2 cut(s) 113, 1732
Bpu14I TTCGAA 1 cut(s) 2242
BpuEI CTTGAG 1 cut(s) 550
BsaAI YACGTR 1 cut(s) 202
BsaBI GATNNNNATC 1 cut(s) 2257
BsaI GGTCTC 1 cut(s) 1680
Bsc4I CCNNNNNNNGG 8 cut(s) 229, 1175, 1309, 2090, 2204, 2409, 2659, 3045
Bse1I ACTGG 5 cut(s) 452, 1886, 2124, 2851, 3123
Bse3DI GCAATG 2 cut(s) 675, 3065
Bse8I GATNNNNATC 1 cut(s) 2257
BseBI CCWGG 6 cut(s) 214, 465, 1171, 1596, 1650, 3133
BseGI GGATG 4 cut(s) 1027, 1384, 2258, 2583
BseJI GATNNNNATC 1 cut(s) 2257
BseLI CCNNNNNNNGG 8 cut(s) 229, 1175, 1309, 2090, 2204, 2409, 2659, 3045
BseMI GCAATG 2 cut(s) 675, 3065
BseMII CTCAG 4 cut(s) 86, 127, 1412, 1917
BseNI ACTGG 5 cut(s) 452, 1886, 2124, 2851, 3123
BseRI GAGGAG 2 cut(s) 161, 1668
BseSI GKGCMC 6 cut(s) 15, 106, 796, 2635, 3052, 3077
BseYI CCCAGC 1 cut(s) 189
Bsh1236I CGCG 2 cut(s) 164, 2964
BshNI GGYRCC 6 cut(s) 10, 1393, 2207, 2370, 2569, 3072
BsiHKAI GWGCWC 5 cut(s) 162, 566, 789, 1851, 2103
BsiHKCI CYCGRG 3 cut(s) 224, 788, 879
BslFI GGGAC 7 cut(s) 56, 236, 823, 1111, 2204, 2437, 2594
BslI CCNNNNNNNGG 8 cut(s) 229, 1175, 1309, 2090, 2204, 2409, 2659, 3045
BsmAI GTCTC 3 cut(s) 181, 1680, 2930
BsmBI CGTCTC 1 cut(s) 181
BsmFI GGGAC 7 cut(s) 56, 236, 823, 1111, 2204, 2437, 2594
BsmI GAATGC 1 cut(s) 2998
Bso31I GGTCTC 1 cut(s) 1680
BsoBI CYCGRG 3 cut(s) 224, 788, 879
Bsp119I TTCGAA 1 cut(s) 2242
Bsp120I GGGCCC 2 cut(s) 102, 3048
Bsp1720I GCTNAGC 2 cut(s) 113, 1732
Bsp19I CCATGG 3 cut(s) 2635, 2712, 3086
BspACI CCGC 7 cut(s) 5, 92, 132, 135, 811, 1531, 2796
BspCNI CTCAG 4 cut(s) 85, 126, 1411, 1916
BspFNI CGCG 2 cut(s) 164, 2964
BspMAI CTGCAG 4 cut(s) 319, 1086, 1897, 2029
BspMI ACCTGC 2 cut(s) 1208, 1361
BspPI GGATC 9 cut(s) 83, 402, 940, 1160, 1173, 2062, 2289, 2324, 3123
BspQI GCTCTTC 2 cut(s) 279, 2091
BspT104I TTCGAA 1 cut(s) 2242
BspT107I GGYRCC 6 cut(s) 10, 1393, 2207, 2370, 2569, 3072
BspTI CTTAAG 1 cut(s) 344
BspTNI GGTCTC 1 cut(s) 1680
BsrBI CCGCTC 1 cut(s) 94
BsrDI GCAATG 2 cut(s) 675, 3065
BsrI ACTGG 5 cut(s) 452, 1886, 2124, 2851, 3123
BssT1I CCWWGG 8 cut(s) 285, 1303, 1434, 2635, 2712, 3014, 3080, 3086
Bst2UI CCWGG 6 cut(s) 214, 465, 1171, 1596, 1650, 3133
Bst4CI ACNGT 5 cut(s) 241, 358, 1218, 1981, 2203
Bst6I CTCTTC 5 cut(s) 279, 1251, 1776, 2091, 2293
BstAFI CTTAAG 1 cut(s) 344
BstAPI GCANNNNNTGC 1 cut(s) 665
BstBAI YACGTR 1 cut(s) 202
BstBI TTCGAA 1 cut(s) 2242
BstC8I GCNNGC 8 cut(s) 162, 1086, 1211, 2574, 2661, 2697, 2760, 3026
BstDEI CTNAG 5 cut(s) 72, 113, 1398, 1732, 1903
BstDSI CCRYGG 4 cut(s) 1413, 2635, 2712, 3086
BstENI CCTNNNNNAGG 2 cut(s) 227, 2088
BstF5I GGATG 4 cut(s) 1027, 1384, 2258, 2583
BstFNI CGCG 2 cut(s) 164, 2964
BstHHI GCGC 3 cut(s) 166, 1608, 2966
BstMAI GTCTC 3 cut(s) 181, 1680, 2930
BstNI CCWGG 6 cut(s) 214, 465, 1171, 1596, 1650, 3133
BstNSI RCATGY 3 cut(s) 1213, 1507, 3028
BstPAI GACNNNNGTC 1 cut(s) 2714
BstSCI CCNGG 6 cut(s) 212, 463, 1169, 1594, 1648, 3131
BstSFI CTRYAG 7 cut(s) 315, 845, 1082, 1893, 1971, 2025, 2664
BstSLI GKGCMC 6 cut(s) 15, 106, 796, 2635, 3052, 3077
BstUI CGCG 2 cut(s) 164, 2964
BstV2I GAAGAC 2 cut(s) 1650, 2647
BstX2I RGATCY 4 cut(s) 407, 1165, 2329, 2677
BstXI CCANNNNNNTGG 5 cut(s) 756, 1649, 2341, 3093, 3108
BstYI RGATCY 4 cut(s) 407, 1165, 2329, 2677
BtgI CCRYGG 4 cut(s) 1413, 2635, 2712, 3086
BtgZI GCGATG 1 cut(s) 1454
BtrI CACGTC 2 cut(s) 737, 866
BtsCI GGATG 4 cut(s) 1027, 1384, 2258, 2583
BtsI GCAGTG 1 cut(s) 2283
BtsIMutI CAGTG 4 cut(s) 459, 2131, 2283, 2844
BveI ACCTGC 2 cut(s) 1208, 1361
Cac8I GCNNGC 8 cut(s) 162, 1086, 1211, 2574, 2661, 2697, 2760, 3026
CaiI CAGNNNCTG 3 cut(s) 778, 1892, 2543
CfoI GCGC 3 cut(s) 166, 1608, 2966
CseI GACGC 2 cut(s) 1133, 1322
Csp6I GTAC 6 cut(s) 727, 1518, 1622, 2208, 2268, 2371
CspCI CAANNNNNGTGG 4 cut(s) 271, 306, 2833, 2868
CviQI GTAC 6 cut(s) 727, 1518, 1622, 2208, 2268, 2371
DdeI CTNAG 5 cut(s) 72, 113, 1398, 1732, 1903
DraIII CACNNNGTG 1 cut(s) 2497
EaeI YGGCCR 6 cut(s) 1416, 1592, 1639, 2783, 3017, 3083
Eam1104I CTCTTC 5 cut(s) 279, 1251, 1776, 2091, 2293
EarI CTCTTC 5 cut(s) 279, 1251, 1776, 2091, 2293
EciI GGCGGA 1 cut(s) 121
Ecl136II GAGCTC 3 cut(s) 160, 564, 2101
Eco130I CCWWGG 8 cut(s) 285, 1303, 1434, 2635, 2712, 3014, 3080, 3086
Eco147I AGGCCT 1 cut(s) 1458
Eco24I GRGCYC 6 cut(s) 106, 162, 566, 2083, 2103, 3052
Eco31I GGTCTC 1 cut(s) 1680
Eco32I GATATC 1 cut(s) 1791
Eco47I GGWCC 6 cut(s) 49, 383, 605, 1178, 2219, 2981
Eco53kI GAGCTC 3 cut(s) 160, 564, 2101
Eco57I CTGAAG 5 cut(s) 683, 2256, 2310, 2496, 2754
Eco72I CACGTG 1 cut(s) 202
Eco88I CYCGRG 3 cut(s) 224, 788, 879
EcoICRI GAGCTC 3 cut(s) 160, 564, 2101
EcoNI CCTNNNNNAGG 2 cut(s) 227, 2088
EcoO109I RGGNCCY 2 cut(s) 103, 1178
EcoRI GAATTC 1 cut(s) 3136
EcoRII CCWGG 6 cut(s) 212, 463, 1169, 1594, 1648, 3131
EcoRV GATATC 1 cut(s) 1791
EcoT14I CCWWGG 8 cut(s) 285, 1303, 1434, 2635, 2712, 3014, 3080, 3086
EcoT22I ATGCAT 4 cut(s) 520, 1117, 1211, 3026
EcoT38I GRGCYC 6 cut(s) 106, 162, 566, 2083, 2103, 3052
ErhI CCWWGG 8 cut(s) 285, 1303, 1434, 2635, 2712, 3014, 3080, 3086
Esp3I CGTCTC 1 cut(s) 181
FaqI GGGAC 7 cut(s) 56, 236, 823, 1111, 2204, 2437, 2594
FauNDI CATATG 1 cut(s) 500
FbaI TGATCA 3 cut(s) 1372, 1923, 2161
FokI GGATG 4 cut(s) 1034, 1391, 2245, 2570
FriOI GRGCYC 6 cut(s) 106, 162, 566, 2083, 2103, 3052
FspBI CTAG 7 cut(s) 1044, 1571, 1728, 1823, 2837, 2862, 3035
FspI TGCGCA 1 cut(s) 1607
GlaI GCGC 3 cut(s) 165, 1607, 2965
GsaI CCCAGC 1 cut(s) 193
HgaI GACGC 2 cut(s) 1133, 1322
HhaI GCGC 3 cut(s) 166, 1608, 2966
Hin6I GCGC 3 cut(s) 164, 1606, 2964
HinP1I GCGC 3 cut(s) 164, 1606, 2964
HindIII AAGCTT 1 cut(s) 2952
HphI GGTGA 9 cut(s) 26, 52, 202, 229, 302, 1382, 2156, 2483, 2962
Hpy166II GTNNAC 3 cut(s) 310, 461, 1498
Hpy8I GTNNAC 3 cut(s) 310, 461, 1498
Hpy99I CGWCG 4 cut(s) 158, 741, 870, 1338
HpyAV CCTTC 6 cut(s) 223, 638, 851, 878, 1169, 1303
HpyCH4III ACNGT 5 cut(s) 241, 358, 1218, 1981, 2203
HpyCH4IV ACGT 4 cut(s) 201, 535, 736, 865
HpyF3I CTNAG 5 cut(s) 72, 113, 1398, 1732, 1903
HpySE526I ACGT 4 cut(s) 201, 535, 736, 865
HspAI GCGC 3 cut(s) 164, 1606, 2964
KpnI GGTACC 2 cut(s) 2211, 2374
Ksp22I TGATCA 3 cut(s) 1372, 1923, 2161
LguI GCTCTTC 2 cut(s) 279, 2091
LmnI GCTCC 7 cut(s) 99, 122, 965, 1846, 2086, 2517, 2890
MaeI CTAG 7 cut(s) 1044, 1571, 1728, 1823, 2837, 2862, 3035
MaeII ACGT 4 cut(s) 201, 535, 736, 865
MbiI CCGCTC 1 cut(s) 94
MfeI CAATTG 2 cut(s) 374, 1364
MflI RGATCY 4 cut(s) 407, 1165, 2329, 2677
MlsI TGGCCA 6 cut(s) 1418, 1594, 1641, 2785, 3019, 3085
MluNI TGGCCA 6 cut(s) 1418, 1594, 1641, 2785, 3019, 3085
MlyI GAGTC 7 cut(s) 38, 40, 845, 871, 2419, 2494, 2558
MmeI TCCRAC 2 cut(s) 719, 1814
Mox20I TGGCCA 6 cut(s) 1418, 1594, 1641, 2785, 3019, 3085
Mph1103I ATGCAT 4 cut(s) 520, 1117, 1211, 3026
MroXI GAANNNNTTC 2 cut(s) 2302, 2644
MscI TGGCCA 6 cut(s) 1418, 1594, 1641, 2785, 3019, 3085
MslI CAYNNNNRTG 1 cut(s) 2339
Msp20I TGGCCA 6 cut(s) 1418, 1594, 1641, 2785, 3019, 3085
MspA1I CMGCKG 2 cut(s) 850, 2732
MspCI CTTAAG 1 cut(s) 344
MspR9I CCNGG 6 cut(s) 214, 465, 1171, 1596, 1650, 3133
MunI CAATTG 2 cut(s) 374, 1364
Mva1269I GAATGC 1 cut(s) 2998
MvaI CCWGG 6 cut(s) 214, 465, 1171, 1596, 1650, 3133
MvnI CGCG 2 cut(s) 164, 2964
NcoI CCATGG 3 cut(s) 2635, 2712, 3086
NdeI CATATG 1 cut(s) 500
NmeAIII GCCGAG 1 cut(s) 54
NmuCI GTSAC 6 cut(s) 32, 582, 1289, 1465, 2489, 2497
NsbI TGCGCA 1 cut(s) 1607
NsiI ATGCAT 4 cut(s) 520, 1117, 1211, 3026
NspI RCATGY 3 cut(s) 1213, 1507, 3028
NspV TTCGAA 1 cut(s) 2242
PaeI GCATGC 2 cut(s) 1213, 3028
PaeR7I CTCGAG 2 cut(s) 224, 879
PasI CCCWGGG 1 cut(s) 1170
PceI AGGCCT 1 cut(s) 1458
PciSI GCTCTTC 2 cut(s) 279, 2091
PcsI WCGNNNNNNNCGW 1 cut(s) 2248
PctI GAATGC 1 cut(s) 2998
PdmI GAANNNNTTC 2 cut(s) 2302, 2644
PfeI GAWTC 4 cut(s) 860, 1484, 2345, 2562
PflFI GACNNNGTC 1 cut(s) 47
PleI GAGTC 7 cut(s) 38, 39, 844, 871, 2419, 2494, 2557
PmaCI CACGTG 1 cut(s) 202
PmlI CACGTG 1 cut(s) 202
PpsI GAGTC 7 cut(s) 38, 39, 844, 871, 2419, 2494, 2557
Ppu21I YACGTR 1 cut(s) 202
PpuMI RGGWCCY 1 cut(s) 1178
PshAI GACNNNNGTC 1 cut(s) 2714
PshBI ATTAAT 2 cut(s) 1092, 1664
PsiI TTATAA 2 cut(s) 1868, 2315
Psp124BI GAGCTC 3 cut(s) 162, 566, 2103
Psp1406I AACGTT 1 cut(s) 535
Psp5II RGGWCCY 1 cut(s) 1178
Psp6I CCWGG 6 cut(s) 212, 463, 1169, 1594, 1648, 3131
PspCI CACGTG 1 cut(s) 202
PspFI CCCAGC 1 cut(s) 189
PspGI CCWGG 6 cut(s) 212, 463, 1169, 1594, 1648, 3131
PspOMI GGGCCC 2 cut(s) 102, 3048
PspPPI RGGWCCY 1 cut(s) 1178
PstI CTGCAG 4 cut(s) 319, 1086, 1897, 2029
PstNI CAGNNNCTG 3 cut(s) 778, 1892, 2543
PsuI RGATCY 4 cut(s) 407, 1165, 2329, 2677
PsyI GACNNNGTC 1 cut(s) 47
PvuII CAGCTG 2 cut(s) 850, 2732
RsaI GTAC 6 cut(s) 728, 1519, 1623, 2209, 2269, 2372
RsaNI GTAC 6 cut(s) 727, 1518, 1622, 2208, 2268, 2371
RseI CAYNNNNRTG 1 cut(s) 2339
SacI GAGCTC 3 cut(s) 162, 566, 2103
SapI GCTCTTC 2 cut(s) 279, 2091
ScaI AGTACT 1 cut(s) 1623
SchI GAGTC 7 cut(s) 38, 40, 845, 871, 2419, 2494, 2558
ScrFI CCNGG 6 cut(s) 214, 465, 1171, 1596, 1650, 3133
SfcI CTRYAG 7 cut(s) 315, 845, 1082, 1893, 1971, 2025, 2664
Sfr274I CTCGAG 2 cut(s) 224, 879
SfuI TTCGAA 1 cut(s) 2242
SinI GGWCC 6 cut(s) 49, 383, 605, 1178, 2219, 2981
SlaI CTCGAG 2 cut(s) 224, 879
SmiMI CAYNNNNRTG 1 cut(s) 2339
SmlI CTYRAG 4 cut(s) 224, 344, 565, 879
SmoI CTYRAG 4 cut(s) 224, 344, 565, 879
SpeI ACTAGT 1 cut(s) 1043
SphI GCATGC 2 cut(s) 1213, 3028
SseBI AGGCCT 1 cut(s) 1458
SsiI CCGC 7 cut(s) 5, 92, 132, 135, 811, 1531, 2796
SspI AATATT 2 cut(s) 1246, 1989
SspMI CTAG 7 cut(s) 1044, 1571, 1728, 1823, 2837, 2862, 3035
SstI GAGCTC 3 cut(s) 162, 566, 2103
StuI AGGCCT 1 cut(s) 1458
StyD4I CCNGG 6 cut(s) 212, 463, 1169, 1594, 1648, 3131
StyI CCWWGG 8 cut(s) 285, 1303, 1434, 2635, 2712, 3014, 3080, 3086
TaaI ACNGT 5 cut(s) 241, 358, 1218, 1981, 2203
TaiI ACGT 4 cut(s) 204, 538, 739, 868
TaqII GACCGA 3 cut(s) 37, 400, 2969
TatI WGTACW 2 cut(s) 726, 1621
TauI GCSGC 3 cut(s) 137, 1534, 2798
TfiI GAWTC 4 cut(s) 860, 1484, 2345, 2562
TscAI CASTG 4 cut(s) 459, 2131, 2283, 2851
TseFI GTSAC 6 cut(s) 32, 582, 1289, 1465, 2489, 2497
Tsp45I GTSAC 6 cut(s) 32, 582, 1289, 1465, 2489, 2497
TspGWI ACGGA 2 cut(s) 142, 1402
TspRI CASTG 4 cut(s) 459, 2131, 2283, 2851
Tth111I GACNNNGTC 1 cut(s) 47
Vha464I CTTAAG 1 cut(s) 344
VpaK11BI GGWCC 6 cut(s) 49, 383, 605, 1178, 2219, 2981
VspI ATTAAT 2 cut(s) 1092, 1664
XagI CCTNNNNNAGG 2 cut(s) 227, 2088
XapI RAATTY 4 cut(s) 908, 2309, 2800, 3136
XceI RCATGY 3 cut(s) 1213, 1507, 3028
XcmI CCANNNNNNNNNTGG 2 cut(s) 1693, 3108
XhoI CTCGAG 2 cut(s) 224, 879
XmnI GAANNNNTTC 2 cut(s) 2302, 2644
XspI CTAG 7 cut(s) 1044, 1571, 1728, 1823, 2837, 2862, 3035
ZrmI AGTACT 1 cut(s) 1623
Zsp2I ATGCAT 4 cut(s) 520, 1117, 1211, 3026
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.