mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G48110 |
| fragaria_vesca | FvH4_2g23980 FvH4_2g23980 |
| malus_domestica | MD03G1269000.v1.1 MD11G1289800.v1.1 |
| prunus_persica | Prupe.8G245000_v2.0.a1 |
| pyrus_communis | pycom03g21480 pycom11g25720 |
| rosa_chinensis | RchiOBHm_Chr6g0291641 |
| rosa_laevigata | RLG00000012100 |
| rosa_multiflora | Rmu_co8449785.1_g000001 Rmu_sc0002226.1_g000015 |
| rosa_roxburghii | Rroxscaffold_7G00175900 |
| rosa_rugosa | Rorug06G0220600 |
| rosa_samantha | Rh6AG333200 Rh6BG340000 Rh6CG346300 Rh6DG333500 |
| rosa_wichuraiana | Rw6G029020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2054 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1303 |
| Acc36I | ACCTGC | 2 cut(s) | 1112, 1265 |
| Acc65I | GGTACC | 1 cut(s) | 2109 |
| AccB1I | GGYRCC | 4 cut(s) | 10, 2109, 2945, 3001 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3316 |
| AccBSI | CCGCTC | 2 cut(s) | 94, 1192 |
| AclI | AACGTT | 1 cut(s) | 424 |
| AcoI | YGGCCR | 7 cut(s) | 1320, 1335, 1496, 1543, 2522, 2756, 2956 |
| AcsI | RAATTY | 8 cut(s) | 797, 2048, 2539, 2571, 2731, 3009, 3428, 3456 |
| AcuI | CTGAAG | 5 cut(s) | 560, 2049, 2235, 2493, 3081 |
| AcvI | CACGTG | 2 cut(s) | 202, 213 |
| AcyI | GRCGYC | 1 cut(s) | 3002 |
| AdeI | CACNNNGTG | 1 cut(s) | 2236 |
| AfaI | GTAC | 6 cut(s) | 18, 617, 1423, 1967, 2111, 2157 |
| AfeI | AGCGCT | 2 cut(s) | 2623, 2804 |
| AflII | CTTAAG | 1 cut(s) | 2879 |
| AgeI | ACCGGT | 1 cut(s) | 2585 |
| AhlI | ACTAGT | 2 cut(s) | 932, 3667 |
| AjiI | CACGTC | 1 cut(s) | 626 |
| AjnI | CCWGG | 6 cut(s) | 352, 1498, 2158, 3004, 3362, 3615 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1930, 1962 |
| AleI | CACNNNNGTG | 2 cut(s) | 2856, 2996 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 642, 674, 1785, 1817 |
| Alw21I | GWGCWC | 5 cut(s) | 162, 455, 678, 1512, 3445 |
| Alw26I | GTCTC | 4 cut(s) | 181, 1584, 2669, 3394 |
| Alw44I | GTGCAC | 2 cut(s) | 1508, 3441 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 667, 2282, 3662 |
| Ama87I | CYCGRG | 2 cut(s) | 224, 677 |
| Aor51HI | AGCGCT | 2 cut(s) | 2623, 2804 |
| ApaI | GGGCCC | 1 cut(s) | 106 |
| ApaLI | GTGCAC | 2 cut(s) | 1508, 3441 |
| ApoI | RAATTY | 8 cut(s) | 797, 2048, 2539, 2571, 2731, 3009, 3428, 3456 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3576, 3608 |
| AseI | ATTAAT | 2 cut(s) | 996, 1568 |
| AsiGI | ACCGGT | 1 cut(s) | 2585 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 2041, 2383, 3066 |
| Asp718I | GGTACC | 1 cut(s) | 2109 |
| AspLEI | GCGC | 4 cut(s) | 2624, 2805, 3004, 3421 |
| AsuHPI | GGTGA | 7 cut(s) | 52, 1286, 1895, 2004, 2222, 2701, 3375 |
| AsuII | TTCGAA | 1 cut(s) | 1981 |
| AvaI | CYCGRG | 2 cut(s) | 224, 677 |
| AvaII | GGWCC | 6 cut(s) | 49, 494, 1082, 1195, 1958, 2720 |
| BaeGI | GKGCMC | 9 cut(s) | 15, 106, 144, 685, 1512, 2374, 2707, 2950, 3445 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2093, 2126 |
| BalI | TGGCCA | 6 cut(s) | 1322, 1498, 1545, 2524, 2758, 2958 |
| BamHI | GGATCC | 2 cut(s) | 821, 1069 |
| BanI | GGYRCC | 4 cut(s) | 10, 2109, 2945, 3001 |
| BanII | GRGCYC | 4 cut(s) | 106, 162, 455, 2791 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 570, 602, 2859, 2891 |
| BauI | CACGAG | 1 cut(s) | 3198 |
| BbrPI | CACGTG | 2 cut(s) | 202, 213 |
| BbsI | GAAGAC | 7 cut(s) | 329, 825, 1554, 2386, 2836, 3152, 3575 |
| Bbv12I | GWGCWC | 5 cut(s) | 162, 455, 678, 1512, 3445 |
| BccI | CCATC | 9 cut(s) | 453, 485, 905, 1784, 1918, 2074, 2777, 3443, 3511 |
| BceAI | ACGGC | 5 cut(s) | 10, 122, 133, 622, 791 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3480, 3514 |
| BciT130I | CCWGG | 6 cut(s) | 354, 1500, 2160, 3006, 3364, 3617 |
| BciVI | GTATCC | 1 cut(s) | 1373 |
| BclI | TGATCA | 3 cut(s) | 1276, 1900, 3273 |
| BcoDI | GTCTC | 4 cut(s) | 181, 1584, 2669, 3394 |
| BcuI | ACTAGT | 2 cut(s) | 932, 3667 |
| BfmI | CTRYAG | 5 cut(s) | 734, 986, 2403, 2865, 3186 |
| BfoI | RGCGCY | 3 cut(s) | 2625, 2806, 3005 |
| BfrI | CTTAAG | 1 cut(s) | 2879 |
| BfuAI | ACCTGC | 2 cut(s) | 1112, 1265 |
| BfuI | GTATCC | 1 cut(s) | 1373 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 469 |
| BglII | AGATCT | 1 cut(s) | 2416 |
| BlpI | GCTNAGC | 4 cut(s) | 113, 1633, 2909, 3575 |
| Bme1390I | CCNGG | 6 cut(s) | 354, 1500, 2160, 3006, 3364, 3617 |
| Bme18I | GGWCC | 6 cut(s) | 49, 494, 1082, 1195, 1958, 2720 |
| BmeT110I | CYCGRG | 2 cut(s) | 224, 677 |
| BmgBI | CACGTC | 1 cut(s) | 626 |
| BmrFI | CCNGG | 6 cut(s) | 354, 1500, 2160, 3006, 3364, 3617 |
| BmrI | ACTGGG | 3 cut(s) | 1800, 3484, 3635 |
| BmuI | ACTGGG | 3 cut(s) | 1800, 3484, 3635 |
| BpiI | GAAGAC | 7 cut(s) | 329, 825, 1554, 2386, 2836, 3152, 3575 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3056, 3088 |
| Bpu10I | CCTNAGC | 1 cut(s) | 72 |
| Bpu1102I | GCTNAGC | 4 cut(s) | 113, 1633, 2909, 3575 |
| Bpu14I | TTCGAA | 1 cut(s) | 1981 |
| BpuEI | CTTGAG | 1 cut(s) | 422 |
| BsaAI | YACGTR | 2 cut(s) | 202, 213 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1996 |
| BsaHI | GRCGYC | 1 cut(s) | 3002 |
| BsaI | GGTCTC | 2 cut(s) | 1584, 3394 |
| BsaWI | WCCGGW | 1 cut(s) | 2585 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 437, 467, 642, 672 |
| Bse118I | RCCGGY | 1 cut(s) | 2585 |
| Bse1I | ACTGG | 9 cut(s) | 341, 958, 1227, 1367, 1806, 2403, 2996, 3479, 3630 |
| Bse3DI | GCAATG | 3 cut(s) | 564, 2938, 3198 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1996 |
| BseBI | CCWGG | 6 cut(s) | 354, 1500, 2160, 3006, 3364, 3617 |
| BseGI | GGATG | 5 cut(s) | 916, 1684, 1997, 2769, 3165 |
| BseJI | GATNNNNATC | 1 cut(s) | 1996 |
| BseMI | GCAATG | 3 cut(s) | 564, 2938, 3198 |
| BseMII | CTCAG | 8 cut(s) | 86, 127, 1179, 1316, 2804, 3390, 3545, 3566 |
| BseNI | ACTGG | 9 cut(s) | 341, 958, 1227, 1367, 1806, 2403, 2996, 3479, 3630 |
| BseRI | GAGGAG | 6 cut(s) | 86, 161, 266, 1175, 1572, 2905 |
| BseSI | GKGCMC | 9 cut(s) | 15, 106, 144, 685, 1512, 2374, 2707, 2950, 3445 |
| BseYI | CCCAGC | 1 cut(s) | 189 |
| BsgI | GTGCAG | 1 cut(s) | 3675 |
| BshNI | GGYRCC | 4 cut(s) | 10, 2109, 2945, 3001 |
| BshTI | ACCGGT | 1 cut(s) | 2585 |
| BsiHKAI | GWGCWC | 5 cut(s) | 162, 455, 678, 1512, 3445 |
| BsiHKCI | CYCGRG | 2 cut(s) | 224, 677 |
| BsiSI | CCGG | 1 cut(s) | 2586 |
| BsmAI | GTCTC | 4 cut(s) | 181, 1584, 2669, 3394 |
| BsmBI | CGTCTC | 1 cut(s) | 181 |
| BsmI | GAATGC | 1 cut(s) | 3683 |
| Bso31I | GGTCTC | 2 cut(s) | 1584, 3394 |
| BsoBI | CYCGRG | 2 cut(s) | 224, 677 |
| Bsp119I | TTCGAA | 1 cut(s) | 1981 |
| Bsp120I | GGGCCC | 1 cut(s) | 102 |
| Bsp1720I | GCTNAGC | 4 cut(s) | 113, 1633, 2909, 3575 |
| Bsp19I | CCATGG | 5 cut(s) | 2374, 2451, 2959, 3310, 3648 |
| BspCNI | CTCAG | 8 cut(s) | 85, 126, 1180, 1315, 2803, 3389, 3544, 3567 |
| BspHI | TCATGA | 2 cut(s) | 1279, 3054 |
| BspMAI | CTGCAG | 3 cut(s) | 738, 990, 3190 |
| BspMI | ACCTGC | 2 cut(s) | 1112, 1265 |
| BspT104I | TTCGAA | 1 cut(s) | 1981 |
| BspT107I | GGYRCC | 4 cut(s) | 10, 2109, 2945, 3001 |
| BspTI | CTTAAG | 1 cut(s) | 2879 |
| BspTNI | GGTCTC | 2 cut(s) | 1584, 3394 |
| BsrBI | CCGCTC | 2 cut(s) | 94, 1192 |
| BsrDI | GCAATG | 3 cut(s) | 564, 2938, 3198 |
| BsrFI | RCCGGY | 1 cut(s) | 2585 |
| BsrI | ACTGG | 9 cut(s) | 341, 958, 1227, 1367, 1806, 2403, 2996, 3479, 3630 |
| BssAI | RCCGGY | 1 cut(s) | 2585 |
| BssNI | GRCGYC | 1 cut(s) | 3002 |
| BssSI | CACGAG | 1 cut(s) | 3198 |
| Bst2BI | CACGAG | 1 cut(s) | 3198 |
| Bst2UI | CCWGG | 6 cut(s) | 354, 1500, 2160, 3006, 3364, 3617 |
| Bst4CI | ACNGT | 5 cut(s) | 241, 1122, 1176, 1942, 2842 |
| Bst6I | CTCTTC | 5 cut(s) | 1152, 1677, 2032, 3057, 3600 |
| BstACI | GRCGYC | 1 cut(s) | 3002 |
| BstAFI | CTTAAG | 1 cut(s) | 2879 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 554 |
| BstBAI | YACGTR | 2 cut(s) | 202, 213 |
| BstBI | TTCGAA | 1 cut(s) | 1981 |
| BstDSI | CCRYGG | 5 cut(s) | 2374, 2451, 2959, 3310, 3648 |
| BstEII | GGTNACC | 1 cut(s) | 3114 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 227, 1827 |
| BstF5I | GGATG | 5 cut(s) | 916, 1684, 1997, 2769, 3165 |
| BstH2I | RGCGCY | 3 cut(s) | 2625, 2806, 3005 |
| BstHHI | GCGC | 4 cut(s) | 2624, 2805, 3004, 3421 |
| BstMAI | GTCTC | 4 cut(s) | 181, 1584, 2669, 3394 |
| BstNI | CCWGG | 6 cut(s) | 354, 1500, 2160, 3006, 3364, 3617 |
| BstNSI | RCATGY | 4 cut(s) | 1117, 1411, 2326, 2767 |
| BstPI | GGTNACC | 1 cut(s) | 3114 |
| BstSCI | CCNGG | 6 cut(s) | 352, 1498, 2158, 3004, 3362, 3615 |
| BstSFI | CTRYAG | 5 cut(s) | 734, 986, 2403, 2865, 3186 |
| BstSLI | GKGCMC | 9 cut(s) | 15, 106, 144, 685, 1512, 2374, 2707, 2950, 3445 |
| BstV2I | GAAGAC | 7 cut(s) | 329, 825, 1554, 2386, 2836, 3152, 3575 |
| BstX2I | RGATCY | 5 cut(s) | 296, 821, 1069, 2068, 2416 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 332, 2080, 2966, 2981 |
| BstYI | RGATCY | 5 cut(s) | 296, 821, 1069, 2068, 2416 |
| BsuI | GTATCC | 1 cut(s) | 1373 |
| BtgI | CCRYGG | 5 cut(s) | 2374, 2451, 2959, 3310, 3648 |
| BtgZI | GCGATG | 1 cut(s) | 1358 |
| BtrI | CACGTC | 1 cut(s) | 626 |
| BtsCI | GGATG | 5 cut(s) | 916, 1684, 1997, 2769, 3165 |
| BtsIMutI | CAGTG | 3 cut(s) | 348, 1323, 3003 |
| BveI | ACCTGC | 2 cut(s) | 1112, 1265 |
| CaiI | CAGNNNCTG | 3 cut(s) | 667, 2282, 3662 |
| CciI | TCATGA | 2 cut(s) | 1279, 3054 |
| CfoI | GCGC | 4 cut(s) | 2624, 2805, 3004, 3421 |
| Cfr10I | RCCGGY | 1 cut(s) | 2585 |
| CseI | GACGC | 4 cut(s) | 1037, 1226, 1424, 3580 |
| Csp6I | GTAC | 6 cut(s) | 17, 616, 1422, 1966, 2110, 2156 |
| CspAI | ACCGGT | 1 cut(s) | 2585 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2572, 2607 |
| CviQI | GTAC | 6 cut(s) | 17, 616, 1422, 1966, 2110, 2156 |
| DinI | GGCGCC | 1 cut(s) | 3003 |
| DraIII | CACNNNGTG | 1 cut(s) | 2236 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1303 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1303 |
| EaeI | YGGCCR | 7 cut(s) | 1320, 1335, 1496, 1543, 2522, 2756, 2956 |
| Eam1104I | CTCTTC | 5 cut(s) | 1152, 1677, 2032, 3057, 3600 |
| EarI | CTCTTC | 5 cut(s) | 1152, 1677, 2032, 3057, 3600 |
| EciI | GGCGGA | 1 cut(s) | 121 |
| Ecl136II | GAGCTC | 2 cut(s) | 160, 453 |
| Eco147I | AGGCCT | 3 cut(s) | 537, 1286, 1362 |
| Eco24I | GRGCYC | 4 cut(s) | 106, 162, 455, 2791 |
| Eco31I | GGTCTC | 2 cut(s) | 1584, 3394 |
| Eco32I | GATATC | 1 cut(s) | 3243 |
| Eco47I | GGWCC | 6 cut(s) | 49, 494, 1082, 1195, 1958, 2720 |
| Eco47III | AGCGCT | 2 cut(s) | 2623, 2804 |
| Eco53kI | GAGCTC | 2 cut(s) | 160, 453 |
| Eco57I | CTGAAG | 5 cut(s) | 560, 2049, 2235, 2493, 3081 |
| Eco72I | CACGTG | 2 cut(s) | 202, 213 |
| Eco88I | CYCGRG | 2 cut(s) | 224, 677 |
| Eco91I | GGTNACC | 1 cut(s) | 3114 |
| EcoICRI | GAGCTC | 2 cut(s) | 160, 453 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 227, 1827 |
| EcoO109I | RGGNCCY | 3 cut(s) | 103, 1082, 1195 |
| EcoO65I | GGTNACC | 1 cut(s) | 3114 |
| EcoRI | GAATTC | 2 cut(s) | 2731, 3009 |
| EcoRII | CCWGG | 6 cut(s) | 352, 1498, 2158, 3004, 3362, 3615 |
| EcoRV | GATATC | 1 cut(s) | 3243 |
| EcoT22I | ATGCAT | 3 cut(s) | 1021, 1115, 2765 |
| EcoT38I | GRGCYC | 4 cut(s) | 106, 162, 455, 2791 |
| EgeI | GGCGCC | 1 cut(s) | 3003 |
| EheI | GGCGCC | 1 cut(s) | 3003 |
| Esp3I | CGTCTC | 1 cut(s) | 181 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2873, 2905 |
| FauI | CCCGC | 4 cut(s) | 99, 919, 952, 1185 |
| FauNDI | CATATG | 2 cut(s) | 389, 3493 |
| FbaI | TGATCA | 3 cut(s) | 1276, 1900, 3273 |
| FokI | GGATG | 5 cut(s) | 923, 1691, 1984, 2756, 3172 |
| FriOI | GRGCYC | 4 cut(s) | 106, 162, 455, 2791 |
| GlaI | GCGC | 4 cut(s) | 2623, 2804, 3003, 3420 |
| GsaI | CCCAGC | 1 cut(s) | 193 |
| HaeII | RGCGCY | 3 cut(s) | 2625, 2806, 3005 |
| HapII | CCGG | 1 cut(s) | 2586 |
| HgaI | GACGC | 4 cut(s) | 1037, 1226, 1424, 3580 |
| HhaI | GCGC | 4 cut(s) | 2624, 2805, 3004, 3421 |
| Hin1I | GRCGYC | 1 cut(s) | 3002 |
| Hin6I | GCGC | 4 cut(s) | 2622, 2803, 3002, 3419 |
| HinP1I | GCGC | 4 cut(s) | 2622, 2803, 3002, 3419 |
| HindIII | AAGCTT | 1 cut(s) | 2691 |
| HpaII | CCGG | 1 cut(s) | 2586 |
| HphI | GGTGA | 7 cut(s) | 52, 1286, 1895, 2004, 2222, 2701, 3375 |
| Hpy166II | GTNNAC | 7 cut(s) | 350, 974, 1510, 2396, 2926, 3373, 3443 |
| Hpy8I | GTNNAC | 7 cut(s) | 350, 974, 1510, 2396, 2926, 3373, 3443 |
| Hpy99I | CGWCG | 4 cut(s) | 31, 158, 630, 1242 |
| HpyCH4III | ACNGT | 5 cut(s) | 241, 1122, 1176, 1942, 2842 |
| HpyCH4IV | ACGT | 6 cut(s) | 201, 212, 424, 625, 2701, 2922 |
| HpySE526I | ACGT | 6 cut(s) | 201, 212, 424, 625, 2701, 2922 |
| Hsp92I | GRCGYC | 1 cut(s) | 3002 |
| HspAI | GCGC | 4 cut(s) | 2622, 2803, 3002, 3419 |
| KasI | GGCGCC | 1 cut(s) | 3001 |
| KflI | GGGWCCC | 1 cut(s) | 1195 |
| KpnI | GGTACC | 1 cut(s) | 2113 |
| Ksp22I | TGATCA | 3 cut(s) | 1276, 1900, 3273 |
| LmnI | GCTCC | 7 cut(s) | 99, 122, 458, 854, 2619, 2629, 2918 |
| MaeII | ACGT | 6 cut(s) | 201, 212, 424, 625, 2701, 2922 |
| MbiI | CCGCTC | 2 cut(s) | 94, 1192 |
| MflI | RGATCY | 5 cut(s) | 296, 821, 1069, 2068, 2416 |
| MlsI | TGGCCA | 6 cut(s) | 1322, 1498, 1545, 2524, 2758, 2958 |
| MluNI | TGGCCA | 6 cut(s) | 1322, 1498, 1545, 2524, 2758, 2958 |
| Mly113I | GGCGCC | 1 cut(s) | 3002 |
| MlyI | GAGTC | 8 cut(s) | 38, 40, 734, 1813, 2158, 2233, 2297, 3368 |
| MmeI | TCCRAC | 3 cut(s) | 79, 608, 1715 |
| Mox20I | TGGCCA | 6 cut(s) | 1322, 1498, 1545, 2524, 2758, 2958 |
| Mph1103I | ATGCAT | 3 cut(s) | 1021, 1115, 2765 |
| MroXI | GAANNNNTTC | 3 cut(s) | 2041, 2383, 3066 |
| MscI | TGGCCA | 6 cut(s) | 1322, 1498, 1545, 2524, 2758, 2958 |
| MseI | TTAA | 8 cut(s) | 507, 996, 1250, 1292, 1568, 1602, 2028, 2880 |
| MslI | CAYNNNNRTG | 3 cut(s) | 2078, 2856, 2996 |
| Msp20I | TGGCCA | 6 cut(s) | 1322, 1498, 1545, 2524, 2758, 2958 |
| MspA1I | CMGCKG | 5 cut(s) | 667, 739, 1763, 2471, 3659 |
| MspCI | CTTAAG | 1 cut(s) | 2879 |
| MspI | CCGG | 1 cut(s) | 2586 |
| MspR9I | CCNGG | 6 cut(s) | 354, 1500, 2160, 3006, 3364, 3617 |
| Mva1269I | GAATGC | 1 cut(s) | 3683 |
| MvaI | CCWGG | 6 cut(s) | 354, 1500, 2160, 3006, 3364, 3617 |
| NarI | GGCGCC | 1 cut(s) | 3002 |
| NcoI | CCATGG | 5 cut(s) | 2374, 2451, 2959, 3310, 3648 |
| NdeI | CATATG | 2 cut(s) | 389, 3493 |
| NmuCI | GTSAC | 5 cut(s) | 639, 2228, 2236, 2810, 3470 |
| NsiI | ATGCAT | 3 cut(s) | 1021, 1115, 2765 |
| NspI | RCATGY | 4 cut(s) | 1117, 1411, 2326, 2767 |
| NspV | TTCGAA | 1 cut(s) | 1981 |
| OliI | CACNNNNGTG | 2 cut(s) | 2856, 2996 |
| PaeI | GCATGC | 2 cut(s) | 1117, 2767 |
| PaeR7I | CTCGAG | 1 cut(s) | 224 |
| PagI | TCATGA | 2 cut(s) | 1279, 3054 |
| PceI | AGGCCT | 3 cut(s) | 537, 1286, 1362 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1987 |
| PctI | GAATGC | 1 cut(s) | 3683 |
| PdmI | GAANNNNTTC | 3 cut(s) | 2041, 2383, 3066 |
| PfeI | GAWTC | 6 cut(s) | 749, 766, 1388, 2084, 3067, 3335 |
| PflFI | GACNNNGTC | 1 cut(s) | 47 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3316 |
| PinAI | ACCGGT | 1 cut(s) | 2585 |
| PleI | GAGTC | 8 cut(s) | 38, 39, 733, 1813, 2158, 2233, 2296, 3368 |
| PluTI | GGCGCC | 1 cut(s) | 3005 |
| PmaCI | CACGTG | 2 cut(s) | 202, 213 |
| PmlI | CACGTG | 2 cut(s) | 202, 213 |
| PpsI | GAGTC | 8 cut(s) | 38, 39, 733, 1813, 2158, 2233, 2296, 3368 |
| Ppu21I | YACGTR | 2 cut(s) | 202, 213 |
| PpuMI | RGGWCCY | 2 cut(s) | 1082, 1195 |
| PshBI | ATTAAT | 2 cut(s) | 996, 1568 |
| PsiI | TTATAA | 1 cut(s) | 2054 |
| Psp124BI | GAGCTC | 2 cut(s) | 162, 455 |
| Psp1406I | AACGTT | 1 cut(s) | 424 |
| Psp5II | RGGWCCY | 2 cut(s) | 1082, 1195 |
| Psp6I | CCWGG | 6 cut(s) | 352, 1498, 2158, 3004, 3362, 3615 |
| PspCI | CACGTG | 2 cut(s) | 202, 213 |
| PspEI | GGTNACC | 1 cut(s) | 3114 |
| PspFI | CCCAGC | 1 cut(s) | 189 |
| PspGI | CCWGG | 6 cut(s) | 352, 1498, 2158, 3004, 3362, 3615 |
| PspOMI | GGGCCC | 1 cut(s) | 102 |
| PspPPI | RGGWCCY | 2 cut(s) | 1082, 1195 |
| PstI | CTGCAG | 3 cut(s) | 738, 990, 3190 |
| PstNI | CAGNNNCTG | 3 cut(s) | 667, 2282, 3662 |
| PsuI | RGATCY | 5 cut(s) | 296, 821, 1069, 2068, 2416 |
| PsyI | GACNNNGTC | 1 cut(s) | 47 |
| PvuII | CAGCTG | 4 cut(s) | 667, 739, 2471, 3659 |
| RsaI | GTAC | 6 cut(s) | 18, 617, 1423, 1967, 2111, 2157 |
| RsaNI | GTAC | 6 cut(s) | 17, 616, 1422, 1966, 2110, 2156 |
| RseI | CAYNNNNRTG | 3 cut(s) | 2078, 2856, 2996 |
| SacI | GAGCTC | 2 cut(s) | 162, 455 |
| SaqAI | TTAA | 8 cut(s) | 507, 996, 1250, 1292, 1568, 1602, 2028, 2880 |
| SchI | GAGTC | 8 cut(s) | 38, 40, 734, 1813, 2158, 2233, 2297, 3368 |
| ScrFI | CCNGG | 6 cut(s) | 354, 1500, 2160, 3006, 3364, 3617 |
| SfcI | CTRYAG | 5 cut(s) | 734, 986, 2403, 2865, 3186 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 469 |
| SfoI | GGCGCC | 1 cut(s) | 3003 |
| Sfr274I | CTCGAG | 1 cut(s) | 224 |
| SfuI | TTCGAA | 1 cut(s) | 1981 |
| SgrAI | CRCCGGYG | 1 cut(s) | 2585 |
| SinI | GGWCC | 6 cut(s) | 49, 494, 1082, 1195, 1958, 2720 |
| SlaI | CTCGAG | 1 cut(s) | 224 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 2078, 2856, 2996 |
| SmlI | CTYRAG | 3 cut(s) | 224, 401, 2879 |
| SmoI | CTYRAG | 3 cut(s) | 224, 401, 2879 |
| SpeI | ACTAGT | 2 cut(s) | 932, 3667 |
| SphI | GCATGC | 2 cut(s) | 1117, 2767 |
| SseBI | AGGCCT | 3 cut(s) | 537, 1286, 1362 |
| SspDI | GGCGCC | 1 cut(s) | 3001 |
| SspI | AATATT | 1 cut(s) | 1150 |
| SstI | GAGCTC | 2 cut(s) | 162, 455 |
| StuI | AGGCCT | 3 cut(s) | 537, 1286, 1362 |
| StyD4I | CCNGG | 6 cut(s) | 352, 1498, 2158, 3004, 3362, 3615 |
| TaaI | ACNGT | 5 cut(s) | 241, 1122, 1176, 1942, 2842 |
| TaiI | ACGT | 6 cut(s) | 204, 215, 427, 628, 2704, 2925 |
| TaqI | TCGA | 9 cut(s) | 29, 156, 225, 432, 1644, 1796, 1981, 1990, 2023 |
| TaqII | GACCGA | 3 cut(s) | 37, 2708, 3021 |
| TatI | WGTACW | 1 cut(s) | 615 |
| TauI | GCSGC | 4 cut(s) | 137, 1337, 1766, 2537 |
| TfiI | GAWTC | 6 cut(s) | 749, 766, 1388, 2084, 3067, 3335 |
| Tru1I | TTAA | 8 cut(s) | 507, 996, 1250, 1292, 1568, 1602, 2028, 2880 |
| Tru9I | TTAA | 8 cut(s) | 507, 996, 1250, 1292, 1568, 1602, 2028, 2880 |
| TscAI | CASTG | 3 cut(s) | 348, 1323, 3003 |
| TseFI | GTSAC | 5 cut(s) | 639, 2228, 2236, 2810, 3470 |
| Tsp45I | GTSAC | 5 cut(s) | 639, 2228, 2236, 2810, 3470 |
| TspGWI | ACGGA | 2 cut(s) | 142, 3412 |
| TspRI | CASTG | 3 cut(s) | 348, 1323, 3003 |
| Tth111I | GACNNNGTC | 1 cut(s) | 47 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3316 |
| Vha464I | CTTAAG | 1 cut(s) | 2879 |
| VneI | GTGCAC | 2 cut(s) | 1508, 3441 |
| VpaK11BI | GGWCC | 6 cut(s) | 49, 494, 1082, 1195, 1958, 2720 |
| VspI | ATTAAT | 2 cut(s) | 996, 1568 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 227, 1827 |
| XapI | RAATTY | 8 cut(s) | 797, 2048, 2539, 2571, 2731, 3009, 3428, 3456 |
| XceI | RCATGY | 4 cut(s) | 1117, 1411, 2326, 2767 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2981, 3127 |
| XhoI | CTCGAG | 1 cut(s) | 224 |
| XmnI | GAANNNNTTC | 3 cut(s) | 2041, 2383, 3066 |
| Zsp2I | ATGCAT | 3 cut(s) | 1021, 1115, 2765 |