Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0011732

Physical Location & Seq

Genomic Coordinates Reverse (-)

21769079 .. 21771421

Gene Structure 2343 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g21480.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1962 bp

ATGCCTATTTGTGAAGTTTTTGGCTCAAGTGTTCCCAATTTCTCATGGACTCCAACAACAGGGGAAGAACTCTCATGCCATGCAGTGTTCTCAAATGCTTTTACACTTCTATTGAGGTTGTGGAGATTTGATCATCCACCTCTTGAACACATGATGGGCGACTACCCAACTGTGGGAATCCAAACTGGTCCAGAATACCTCTTGTTGCTGCGAAACTGTCGATTAGCATCCATGGGTAATTCAATCAGGGATCGAATAAAAAGCAGAAGAGTTTCAAAATTCATCACCTTCCCTTCAGGTACCATTACCATGGATTGCTTTCCAAGACTGAAACTCTGGTACCAGCAACATCAAAAATGTATTTGCTCTACCCTGTCTGGGCTTGTACCTGGGACTCCCGTTCATCAACTTGTTGATGCACTCCTGACCATGATGTTTAGAAAAATAAATAGTAGTCAGCCGTTGACTCCAGCAACGTCAGGTAATAGTAATTCATCTGCATCGGGAACTGATGAGTCCTGTATTAGACTCAAGGTACCAGCCTGGGATATCCTTGAAGCAACTCCATTTGTACTTGATGCTGCTCTTACTGCATGCGCCCATGGAAGACTATCTCCCCGTGAACTGGCTACAGGACTGAAAGATCTAGCTGATTATCTTCCAGCGACTTTGGGAACCATGGTAAGCTATTTTTCAGCTGAAGTAACACGGGGAATATGGAAGCCAGCTTGTATGAATGGAACTGATTGGCCAAGCCCTGCTGCAAATTTACTACTTGTTGAGCAGCAAATAAAGAAAATCCTAGCTGCCACTGGTGTTGATGTCCCTAGCCTCGCAGTTGGTGGGAGCTCCCCAGCCACACTTCCCTTACCATTGGCAGCCCTCATAAGTCTCACAATAACTTATAAACTTGATAGAGCCTCTGAACGTGCCCTCCATCTGATTGGACCGGCCATGAACTCCCTAGCTGCTGGTTGCCCATGGCCATGCATGCCGATCCTAGCCTCATTGTGGGCCCAGAAGGTAAAGCGCTGGAGTGACTTCCTGGTGTTTTCTGCTTCTCAAACTGTCTTCCACCACAACAGTGATGCTGTGGTCCAGCTTCTTAAGAGCTGCTTTACATCTACTCTCGGGTTAAGTTCCTCTCATGCTTACAGCAACAGCAGTGTGGGTGCCCTTCTTGGTCATGGCTTTGGTTCCCATTTGTCTGGTGGGATTTCTCCTGTTGCCCCTGGAATTCTTTACTTGCGTGTGCACCGGTCTGTCAGAGATGTAATGTTCCTGACAGAAGAGGTGCTCTCTCTTCTAATGTATTCTGTTAGAGATATTGCATATTGCGGGTTACCAAGAGAGAGGGTGGAGAAATTGAGGAAGACCAAGCATGGGACGAGGTATGGACAGGTTTCTCTTGCTGCCGCAATGGCACGCATCAAGATTGCAGCTACACTTGGGGCCACTTTAGTTTGGATATCTGGCGGATCGAGTTTAGTTCAATCCTTGATCAAAGAAACTTTACCTTCCTGGTTTATATCGACCCGTGGTTTGGATCAGGAAGGCAGAGAACCTGGAGGTATGGTTGCCATGTTGGGAGGTTATGCCCTTGCATACTTTGCAGTACTTTGTGGGACGTTTGCTTGGGGTGTGGATTCAGTATCACCAGCATCAAAGCGGCGACCAACGGTTCTCGGGCGGCATTTGGGATTTATTGCAGGCGCGCTGGACGGGAAAATATCACTGGGTTGTGATTGGGCTATGTGGCGGGCATATGTGTCAGGATTTATCAGCTTGATGGTGTCATGCACGCAGAAGTGGGTGCTAGAAGTTGATGTGGAAATATTGAAGATACTGAGCAAGGGACTTAGACGGTGGAATGAGGAAGAACTGGCTCTGGCCCTGCTGGGACTCGGTGGCGTTGAGGCCATGGGCGCAGCAGCTGAACTAGTCGTTGAATGTGAGGTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006725 GO:0008150 GO:0008152 GO:0009698 GO:0009987 GO:0016020 GO:0016592 GO:0019222 GO:0019748 GO:0031323 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043455 GO:0044237 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0050789 GO:0050794 GO:0065007 GO:0070013 GO:0071704 GO:1901360 GO:2000762

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

654

Amino Acids

70.65

Weight (kDa)

8.74

Isoelectric Point (pI)

42.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011732)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G48110
fragaria_vesca	FvH4_2g23980 FvH4_2g23980
malus_domestica	MD03G1269000.v1.1 MD11G1289800.v1.1
prunus_persica	Prupe.8G245000_v2.0.a1
pyrus_communis	pycom03g21480 pycom11g25720
rosa_chinensis	RchiOBHm_Chr6g0291641
rosa_laevigata	RLG00000012100
rosa_multiflora	Rmu_co8449785.1_g000001 Rmu_sc0002226.1_g000015
rosa_roxburghii	Rroxscaffold_7G00175900
rosa_rugosa	Rorug06G0220600
rosa_samantha	Rh6AG333200 Rh6BG340000 Rh6CG346300 Rh6DG333500
rosa_wichuraiana	Rw6G029020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	906
Acc65I	GGTACC	3 cut(s)	299, 339, 535
AccB1I	GGYRCC	4 cut(s)	299, 339, 535, 1172
AccII	CGCG	1 cut(s)	1715
AciI	CCGC	6 cut(s)	1338, 1416, 1476, 1669, 1690, 1759
AclWI	GGATC	4 cut(s)	258, 991, 1486, 1554
AcoI	YGGCCR	3 cut(s)	749, 951, 983
AcsI	RAATTY	3 cut(s)	278, 766, 1236
AcuI	CTGAAG	2 cut(s)	279, 720
AfaI	GTAC	6 cut(s)	301, 341, 387, 537, 573, 1617
AfeI	AGCGCT	1 cut(s)	1031
AfiI	CCNNNNNNNGG	8 cut(s)	59, 172, 173, 378, 625, 1011, 1383, 1543
AflII	CTTAAG	1 cut(s)	1106
AgeI	ACCGGT	1 cut(s)	1257
AgsI	TTSAA	7 cut(s)	146, 243, 276, 557, 1493, 1840, 1949
AhlI	ACTAGT	1 cut(s)	1939
AjnI	CCWGG	6 cut(s)	388, 542, 1044, 1231, 1520, 1564
AleI	CACNNNNGTG	1 cut(s)	1083
AloI	GAACNNNNNNTCC	2 cut(s)	918, 950
Alw21I	GWGCWC	3 cut(s)	851, 1257, 1299
Alw26I	GTCTC	1 cut(s)	896
Alw44I	GTGCAC	1 cut(s)	1253
AlwI	GGATC	4 cut(s)	258, 991, 1486, 1554
AlwNI	CAGNNNCTG	1 cut(s)	1934
Ama87I	CYCGRG	2 cut(s)	1130, 1685
Aor51HI	AGCGCT	1 cut(s)	1031
AoxI	GGCC	7 cut(s)	749, 951, 983, 1014, 1452, 1890, 1917
ApaI	GGGCCC	1 cut(s)	1018
ApaLI	GTGCAC	1 cut(s)	1253
ApoI	RAATTY	3 cut(s)	278, 766, 1236
ArsI	GACNNNNNNTTYG	2 cut(s)	1525, 1557
AsiGI	ACCGGT	1 cut(s)	1257
Asp700I	GAANNNNTTC	1 cut(s)	271
Asp718I	GGTACC	3 cut(s)	299, 339, 535
AspLEI	GCGC	5 cut(s)	599, 1032, 1715, 1717, 1928
AspS9I	GGNCC	7 cut(s)	188, 947, 1014, 1015, 1096, 1452, 1891
AsuHPI	GGTGA	2 cut(s)	277, 1647
AvaI	CYCGRG	2 cut(s)	1130, 1685
AvaII	GGWCC	3 cut(s)	188, 947, 1096
BaeGI	GKGCMC	4 cut(s)	934, 1018, 1177, 1257
BaeI	ACNNNNGTAYC	2 cut(s)	323, 356
BalI	TGGCCA	2 cut(s)	751, 985
BanI	GGYRCC	4 cut(s)	299, 339, 535, 1172
BanII	GRGCYC	2 cut(s)	851, 1018
BbsI	GAAGAC	3 cut(s)	613, 1063, 1379
Bbv12I	GWGCWC	3 cut(s)	851, 1257, 1299
BccI	CCATC	3 cut(s)	148, 945, 1783
BceAI	ACGGC	1 cut(s)	445
BciT130I	CCWGG	6 cut(s)	390, 544, 1046, 1233, 1522, 1566
BclI	TGATCA	2 cut(s)	130, 1500
BcoDI	GTCTC	1 cut(s)	896
BcuI	ACTAGT	1 cut(s)	1939
BfaI	CTAG	7 cut(s)	647, 803, 828, 965, 1001, 1817, 1940
BfmI	CTRYAG	1 cut(s)	630
BfoI	RGCGCY	1 cut(s)	1033
BfrI	CTTAAG	1 cut(s)	1106
BglI	GCCNNNNNGGC	1 cut(s)	1421
BglII	AGATCT	1 cut(s)	643
BmcAI	AGTACT	1 cut(s)	1617
Bme1390I	CCNGG	6 cut(s)	390, 544, 1046, 1233, 1522, 1566
Bme18I	GGWCC	3 cut(s)	188, 947, 1096
BmeT110I	CYCGRG	2 cut(s)	1130, 1685
BmgT120I	GGNCC	7 cut(s)	188, 947, 1014, 1015, 1096, 1452, 1891
BmiI	GGNNCC	8 cut(s)	301, 341, 537, 676, 1016, 1174, 1198, 1453
BmrFI	CCNGG	6 cut(s)	390, 544, 1046, 1233, 1522, 1566
BmrI	ACTGGG	1 cut(s)	1745
BmsI	GCATC	7 cut(s)	236, 406, 509, 568, 1078, 1437, 1670
BmuI	ACTGGG	1 cut(s)	1745
BpiI	GAAGAC	3 cut(s)	613, 1063, 1379
BplI	GAGNNNNNCTC	2 cut(s)	1283, 1315
BpmI	CTGGAG	3 cut(s)	453, 1054, 1587
BpuEI	CTTGAG	2 cut(s)	10, 515
BsaBI	GATNNNNATC	1 cut(s)	226
BsaWI	WCCGGW	1 cut(s)	1257
BsaXI	ACNNNNNCTCC	4 cut(s)	918, 948, 1560, 1590
Bsc4I	CCNNNNNNNGG	8 cut(s)	59, 172, 173, 378, 625, 1011, 1383, 1543
Bse118I	RCCGGY	2 cut(s)	949, 1257
Bse1I	ACTGG	5 cut(s)	190, 630, 817, 1740, 1887
Bse3DI	GCAATG	1 cut(s)	1425
Bse8I	GATNNNNATC	1 cut(s)	226
BseBI	CCWGG	6 cut(s)	390, 544, 1046, 1233, 1522, 1566
BseGI	GGATG	2 cut(s)	133, 227
BseJI	GATNNNNATC	1 cut(s)	226
BseLI	CCNNNNNNNGG	8 cut(s)	59, 172, 173, 378, 625, 1011, 1383, 1543
BseMI	GCAATG	1 cut(s)	1425
BseMII	CTCAG	1 cut(s)	1838
BseNI	ACTGG	5 cut(s)	190, 630, 817, 1740, 1887
BsePI	GCGCGC	1 cut(s)	1713
BseSI	GKGCMC	4 cut(s)	934, 1018, 1177, 1257
BseYI	CCCAGC	2 cut(s)	853, 1897
Bsh1236I	CGCG	1 cut(s)	1715
BshFI	GGCC	7 cut(s)	751, 953, 985, 1016, 1454, 1892, 1919
BshNI	GGYRCC	4 cut(s)	299, 339, 535, 1172
BshTI	ACCGGT	1 cut(s)	1257
BsiHKAI	GWGCWC	3 cut(s)	851, 1257, 1299
BsiHKCI	CYCGRG	2 cut(s)	1130, 1685
BsiSI	CCGG	2 cut(s)	950, 1258
BslFI	GGGAC	6 cut(s)	406, 809, 1399, 1639, 1869, 1914
BslI	CCNNNNNNNGG	8 cut(s)	59, 172, 173, 378, 625, 1011, 1383, 1543
BsmAI	GTCTC	1 cut(s)	896
BsmFI	GGGAC	6 cut(s)	406, 809, 1399, 1639, 1869, 1914
BsnI	GGCC	7 cut(s)	751, 953, 985, 1016, 1454, 1892, 1919
BsoBI	CYCGRG	2 cut(s)	1130, 1685
Bsp120I	GGGCCC	1 cut(s)	1014
Bsp1286I	GDGCHC	6 cut(s)	851, 934, 1018, 1177, 1257, 1299
Bsp143I	GATC	7 cut(s)	130, 250, 643, 996, 1478, 1500, 1546
Bsp19I	CCATGG	6 cut(s)	231, 309, 601, 678, 980, 1920
BspACI	CCGC	6 cut(s)	1338, 1416, 1476, 1669, 1690, 1759
BspANI	GGCC	7 cut(s)	751, 953, 985, 1016, 1454, 1892, 1919
BspCNI	CTCAG	1 cut(s)	1839
BspFNI	CGCG	1 cut(s)	1715
BspLI	GGNNCC	8 cut(s)	301, 341, 537, 676, 1016, 1174, 1198, 1453
BspPI	GGATC	4 cut(s)	258, 991, 1486, 1554
BspT107I	GGYRCC	4 cut(s)	299, 339, 535, 1172
BspTI	CTTAAG	1 cut(s)	1106
BsrDI	GCAATG	1 cut(s)	1425
BsrFI	RCCGGY	2 cut(s)	949, 1257
BsrI	ACTGG	5 cut(s)	190, 630, 817, 1740, 1887
BssAI	RCCGGY	2 cut(s)	949, 1257
BssHII	GCGCGC	1 cut(s)	1713
BssMI	GATC	7 cut(s)	130, 250, 643, 996, 1478, 1500, 1546
BssT1I	CCWWGG	6 cut(s)	231, 309, 601, 678, 980, 1920
Bst2UI	CCWGG	6 cut(s)	390, 544, 1046, 1233, 1522, 1566
Bst4CI	ACNGT	6 cut(s)	172, 218, 1069, 1085, 1681, 1866
Bst6I	CTCTTC	3 cut(s)	262, 1284, 1308
BstAFI	CTTAAG	1 cut(s)	1106
BstAPI	GCANNNNNTGC	1 cut(s)	1610
BstC8I	GCNNGC	8 cut(s)	595, 726, 992, 1426, 1711, 1715, 1761, 1802
BstDEI	CTNAG	2 cut(s)	1847, 1859
BstDSI	CCRYGG	7 cut(s)	231, 309, 601, 678, 980, 1537, 1920
BstEII	GGTNACC	1 cut(s)	1341
BstF5I	GGATG	2 cut(s)	133, 227
BstFNI	CGCG	1 cut(s)	1715
BstH2I	RGCGCY	1 cut(s)	1033
BstHHI	GCGC	5 cut(s)	599, 1032, 1715, 1717, 1928
BstKTI	GATC	7 cut(s)	133, 253, 646, 999, 1481, 1503, 1549
BstMAI	GTCTC	1 cut(s)	896
BstMBI	GATC	7 cut(s)	130, 250, 643, 996, 1478, 1500, 1546
BstMWI	GCNNNNNNNGC	5 cut(s)	590, 991, 1421, 1610, 1925
BstNI	CCWGG	6 cut(s)	390, 544, 1046, 1233, 1522, 1566
BstNSI	RCATGY	2 cut(s)	597, 994
BstPI	GGTNACC	1 cut(s)	1341
BstSCI	CCNGG	6 cut(s)	388, 542, 1044, 1231, 1520, 1564
BstSFI	CTRYAG	1 cut(s)	630
BstSLI	GKGCMC	4 cut(s)	934, 1018, 1177, 1257
BstUI	CGCG	1 cut(s)	1715
BstV2I	GAAGAC	3 cut(s)	613, 1063, 1379
BstX2I	RGATCY	1 cut(s)	643
BstXI	CCANNNNNNTGG	3 cut(s)	310, 944, 1208
BstYI	RGATCY	1 cut(s)	643
BsuRI	GGCC	7 cut(s)	751, 953, 985, 1016, 1454, 1892, 1919
BtgI	CCRYGG	7 cut(s)	231, 309, 601, 678, 980, 1537, 1920
BtsCI	GGATG	2 cut(s)	133, 227
BtsI	GCAGTG	2 cut(s)	90, 1171
BtsIMutI	CAGTG	5 cut(s)	90, 810, 1090, 1171, 1733
Cac8I	GCNNGC	8 cut(s)	595, 726, 992, 1426, 1711, 1715, 1761, 1802
CaiI	CAGNNNCTG	1 cut(s)	1934
CfoI	GCGC	5 cut(s)	599, 1032, 1715, 1717, 1928
Cfr10I	RCCGGY	2 cut(s)	949, 1257
Cfr13I	GGNCC	7 cut(s)	188, 947, 1014, 1015, 1096, 1452, 1891
Csp6I	GTAC	6 cut(s)	300, 340, 386, 536, 572, 1616
CspAI	ACCGGT	1 cut(s)	1257
CspCI	CAANNNNNGTGG	2 cut(s)	799, 834
CviQI	GTAC	6 cut(s)	300, 340, 386, 536, 572, 1616
DdeI	CTNAG	2 cut(s)	1847, 1859
DpnI	GATC	7 cut(s)	132, 252, 645, 998, 1480, 1502, 1548
DpnII	GATC	7 cut(s)	130, 250, 643, 996, 1478, 1500, 1546
EaeI	YGGCCR	3 cut(s)	749, 951, 983
Eam1104I	CTCTTC	3 cut(s)	262, 1284, 1308
EarI	CTCTTC	3 cut(s)	262, 1284, 1308
EciI	GGCGGA	1 cut(s)	1491
Ecl136II	GAGCTC	1 cut(s)	849
Eco130I	CCWWGG	6 cut(s)	231, 309, 601, 678, 980, 1920
Eco24I	GRGCYC	2 cut(s)	851, 1018
Eco32I	GATATC	2 cut(s)	550, 1470
Eco47I	GGWCC	3 cut(s)	188, 947, 1096
Eco47III	AGCGCT	1 cut(s)	1031
Eco53kI	GAGCTC	1 cut(s)	849
Eco57I	CTGAAG	2 cut(s)	279, 720
Eco88I	CYCGRG	2 cut(s)	1130, 1685
Eco91I	GGTNACC	1 cut(s)	1341
EcoICRI	GAGCTC	1 cut(s)	849
EcoO65I	GGTNACC	1 cut(s)	1341
EcoRI	GAATTC	1 cut(s)	1236
EcoRII	CCWGG	6 cut(s)	388, 542, 1044, 1231, 1520, 1564
EcoRV	GATATC	2 cut(s)	550, 1470
EcoT14I	CCWWGG	6 cut(s)	231, 309, 601, 678, 980, 1920
EcoT22I	ATGCAT	1 cut(s)	992
EcoT38I	GRGCYC	2 cut(s)	851, 1018
ErhI	CCWWGG	6 cut(s)	231, 309, 601, 678, 980, 1920
FalI	AAGNNNNNCTT	2 cut(s)	1100, 1132
FaqI	GGGAC	6 cut(s)	406, 809, 1399, 1639, 1869, 1914
FauI	CCCGC	2 cut(s)	1331, 1752
FauNDI	CATATG	1 cut(s)	1765
FbaI	TGATCA	2 cut(s)	130, 1500
FokI	GGATG	2 cut(s)	120, 214
FriOI	GRGCYC	2 cut(s)	851, 1018
FspBI	CTAG	7 cut(s)	647, 803, 828, 965, 1001, 1817, 1940
GlaI	GCGC	5 cut(s)	598, 1031, 1714, 1716, 1927
GsaI	CCCAGC	2 cut(s)	857, 1901
GsuI	CTGGAG	3 cut(s)	453, 1054, 1587
HaeII	RGCGCY	1 cut(s)	1033
HaeIII	GGCC	7 cut(s)	751, 953, 985, 1016, 1454, 1892, 1919
HapII	CCGG	2 cut(s)	950, 1258
HhaI	GCGC	5 cut(s)	599, 1032, 1715, 1717, 1928
Hin6I	GCGC	5 cut(s)	597, 1030, 1713, 1715, 1926
HinP1I	GCGC	5 cut(s)	597, 1030, 1713, 1715, 1926
HincII	GTYRAC	1 cut(s)	465
HindII	GTYRAC	1 cut(s)	465
HinfI	GANTC	8 cut(s)	49, 177, 394, 466, 515, 528, 1646, 1902
HpaII	CCGG	2 cut(s)	950, 1258
HphI	GGTGA	2 cut(s)	277, 1647
Hpy166II	GTNNAC	3 cut(s)	465, 623, 1255
Hpy188I	TCNGA	4 cut(s)	925, 942, 1268, 1961
Hpy188III	TCNNGA	8 cut(s)	143, 191, 424, 504, 1282, 1432, 1550, 1773
Hpy8I	GTNNAC	3 cut(s)	465, 623, 1255
HpyAV	CCTTC	6 cut(s)	298, 303, 1015, 1187, 1527, 1547
HpyCH4III	ACNGT	6 cut(s)	172, 218, 1069, 1085, 1681, 1866
HpyCH4IV	ACGT	3 cut(s)	476, 928, 1628
HpyF10VI	GCNNNNNNNGC	5 cut(s)	590, 991, 1421, 1610, 1925
HpyF3I	CTNAG	2 cut(s)	1847, 1859
HpySE526I	ACGT	3 cut(s)	476, 928, 1628
HspAI	GCGC	5 cut(s)	597, 1030, 1713, 1715, 1926
KpnI	GGTACC	3 cut(s)	303, 343, 539
Ksp22I	TGATCA	2 cut(s)	130, 1500
Kzo9I	GATC	7 cut(s)	130, 250, 643, 996, 1478, 1500, 1546
LmnI	GCTCC	2 cut(s)	846, 854
LweI	GCATC	7 cut(s)	236, 406, 509, 568, 1078, 1437, 1670
MaeI	CTAG	7 cut(s)	647, 803, 828, 965, 1001, 1817, 1940
MaeII	ACGT	3 cut(s)	476, 928, 1628
MaeIII	GTNAC	3 cut(s)	703, 1037, 1341
MalI	GATC	7 cut(s)	132, 252, 645, 998, 1480, 1502, 1548
MboI	GATC	7 cut(s)	130, 250, 643, 996, 1478, 1500, 1546
MflI	RGATCY	1 cut(s)	643
MhlI	GDGCHC	6 cut(s)	851, 934, 1018, 1177, 1257, 1299
MlsI	TGGCCA	2 cut(s)	751, 985
MluCI	AATT	7 cut(s)	37, 238, 278, 490, 766, 1236, 1364
MluNI	TGGCCA	2 cut(s)	751, 985
MlyI	GAGTC	6 cut(s)	43, 388, 460, 522, 524, 1896
MmeI	TCCRAC	1 cut(s)	77
Mox20I	TGGCCA	2 cut(s)	751, 985
Mph1103I	ATGCAT	1 cut(s)	992
MroXI	GAANNNNTTC	1 cut(s)	271
MscI	TGGCCA	2 cut(s)	751, 985
MseI	TTAA	2 cut(s)	1107, 1136
MslI	CAYNNNNRTG	3 cut(s)	308, 985, 1083
Msp20I	TGGCCA	2 cut(s)	751, 985
MspA1I	CMGCKG	2 cut(s)	698, 1934
MspCI	CTTAAG	1 cut(s)	1106
MspI	CCGG	2 cut(s)	950, 1258
MspR9I	CCNGG	6 cut(s)	390, 544, 1046, 1233, 1522, 1566
MvaI	CCWGG	6 cut(s)	390, 544, 1046, 1233, 1522, 1566
MvnI	CGCG	1 cut(s)	1715
MwoI	GCNNNNNNNGC	5 cut(s)	590, 991, 1421, 1610, 1925
NcoI	CCATGG	6 cut(s)	231, 309, 601, 678, 980, 1920
NdeI	CATATG	1 cut(s)	1765
NdeII	GATC	7 cut(s)	130, 250, 643, 996, 1478, 1500, 1546
NlaIV	GGNNCC	8 cut(s)	301, 341, 537, 676, 1016, 1174, 1198, 1453
NmuCI	GTSAC	1 cut(s)	1037
NsiI	ATGCAT	1 cut(s)	992
NspI	RCATGY	2 cut(s)	597, 994
OliI	CACNNNNGTG	1 cut(s)	1083
PaeI	GCATGC	2 cut(s)	597, 994
PauI	GCGCGC	1 cut(s)	1713
PdmI	GAANNNNTTC	1 cut(s)	271
PfeI	GAWTC	2 cut(s)	177, 1646
PinAI	ACCGGT	1 cut(s)	1257
PleI	GAGTC	6 cut(s)	43, 388, 460, 522, 523, 1896
PpsI	GAGTC	6 cut(s)	43, 388, 460, 522, 523, 1896
PsiI	TTATAA	1 cut(s)	906
Psp124BI	GAGCTC	1 cut(s)	851
Psp6I	CCWGG	6 cut(s)	388, 542, 1044, 1231, 1520, 1564
PspEI	GGTNACC	1 cut(s)	1341
PspFI	CCCAGC	2 cut(s)	853, 1897
PspGI	CCWGG	6 cut(s)	388, 542, 1044, 1231, 1520, 1564
PspN4I	GGNNCC	8 cut(s)	301, 341, 537, 676, 1016, 1174, 1198, 1453
PspOMI	GGGCCC	1 cut(s)	1014
PspPI	GGNCC	7 cut(s)	188, 947, 1014, 1015, 1096, 1452, 1891
PstNI	CAGNNNCTG	1 cut(s)	1934
PsuI	RGATCY	1 cut(s)	643
PteI	GCGCGC	1 cut(s)	1713
PvuII	CAGCTG	2 cut(s)	698, 1934
RsaI	GTAC	6 cut(s)	301, 341, 387, 537, 573, 1617
RsaNI	GTAC	6 cut(s)	300, 340, 386, 536, 572, 1616
RseI	CAYNNNNRTG	3 cut(s)	308, 985, 1083
SacI	GAGCTC	1 cut(s)	851
SaqAI	TTAA	2 cut(s)	1107, 1136
Sau3AI	GATC	7 cut(s)	130, 250, 643, 996, 1478, 1500, 1546
Sau96I	GGNCC	7 cut(s)	188, 947, 1014, 1015, 1096, 1452, 1891
ScaI	AGTACT	1 cut(s)	1617
SchI	GAGTC	6 cut(s)	43, 388, 460, 522, 524, 1896
ScrFI	CCNGG	6 cut(s)	390, 544, 1046, 1233, 1522, 1566
SduI	GDGCHC	6 cut(s)	851, 934, 1018, 1177, 1257, 1299
SfaNI	GCATC	7 cut(s)	236, 406, 509, 568, 1078, 1437, 1670
SfcI	CTRYAG	1 cut(s)	630
SinI	GGWCC	3 cut(s)	188, 947, 1096
SmiMI	CAYNNNNRTG	3 cut(s)	308, 985, 1083
SmlI	CTYRAG	3 cut(s)	25, 530, 1106
SmoI	CTYRAG	3 cut(s)	25, 530, 1106
SpeI	ACTAGT	1 cut(s)	1939
SphI	GCATGC	2 cut(s)	597, 994
Sse9I	AATT	7 cut(s)	37, 238, 278, 490, 766, 1236, 1364
SsiI	CCGC	6 cut(s)	1338, 1416, 1476, 1669, 1690, 1759
SspI	AATATT	1 cut(s)	1836
SspMI	CTAG	7 cut(s)	647, 803, 828, 965, 1001, 1817, 1940
SstI	GAGCTC	1 cut(s)	851
StyD4I	CCNGG	6 cut(s)	388, 542, 1044, 1231, 1520, 1564
StyI	CCWWGG	6 cut(s)	231, 309, 601, 678, 980, 1920
TaaI	ACNGT	6 cut(s)	172, 218, 1069, 1085, 1681, 1866
TaiI	ACGT	3 cut(s)	479, 931, 1631
TaqI	TCGA	4 cut(s)	220, 253, 1481, 1532
TasI	AATT	7 cut(s)	37, 238, 278, 490, 766, 1236, 1364
TatI	WGTACW	2 cut(s)	571, 1615
TauI	GCSGC	3 cut(s)	1418, 1672, 1693
TfiI	GAWTC	2 cut(s)	177, 1646
Tru1I	TTAA	2 cut(s)	1107, 1136
Tru9I	TTAA	2 cut(s)	1107, 1136
TscAI	CASTG	5 cut(s)	90, 817, 1090, 1171, 1740
TseFI	GTSAC	1 cut(s)	1037
Tsp45I	GTSAC	1 cut(s)	1037
TspDTI	ATGAA	5 cut(s)	271, 392, 483, 749, 971
TspRI	CASTG	5 cut(s)	90, 817, 1090, 1171, 1740
Vha464I	CTTAAG	1 cut(s)	1106
VneI	GTGCAC	1 cut(s)	1253
VpaK11BI	GGWCC	3 cut(s)	188, 947, 1096
XapI	RAATTY	3 cut(s)	278, 766, 1236
XceI	RCATGY	2 cut(s)	597, 994
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1208
XmnI	GAANNNNTTC	1 cut(s)	271
XspI	CTAG	7 cut(s)	647, 803, 828, 965, 1001, 1817, 1940
ZrmI	AGTACT	1 cut(s)	1617
Zsp2I	ATGCAT	1 cut(s)	992

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.