FvH4_2g24210

Cell wall vacuolar inhibitor of fructosidase 1-like

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
19759430 .. 19759750
321 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g24210.t1

Sequence Viewer

Length: 321 bp
ATGATCGATGTAGTCGGGCTCAGAGCAACCGATGCTCATAACAAAGTTAAGGAGCTTCTTCATCAGAGAGCACGAGAAGATCGACCTTTAATGATCTGTAGTGCACACTACGCATATATTATATCAACTATTGTTCCGAATGCCAAGAGGGATGCTTATACGAACCCTCAGGCAGCAGGGAAATGGATGCGTCTCATTCCCGACACGGTTGAGAAAGGTTGTGAGGATGCATCCAGAGGGTCGTCTCCTCTTACTGACTTTAATCTAGGTGTCGAAAAGGTTGCTGCTATTGCTGAAGCAATAATAGGGCAATTGGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

107

Amino Acids

11.57

Weight (kDa)

6.82

Isoelectric Point (pI)

30.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 315
AluBI AGCT 1 cut(s) 55
AluI AGCT 1 cut(s) 55
Alw21I GWGCWC 2 cut(s) 73, 106
Alw26I GTCTC 2 cut(s) 197, 249
Alw44I GTGCAC 1 cut(s) 102
ApaLI GTGCAC 1 cut(s) 102
ApeKI GCWGC 2 cut(s) 173, 284
AxyI CCTNAGG 1 cut(s) 168
BaeGI GKGCMC 1 cut(s) 106
BanII GRGCYC 1 cut(s) 21
BauI CACGAG 1 cut(s) 72
Bbv12I GWGCWC 2 cut(s) 73, 106
BbvI GCAGC 2 cut(s) 185, 271
BcgI CGANNNNNNTGC 2 cut(s) 263, 297
BcoDI GTCTC 2 cut(s) 197, 249
BfaI CTAG 1 cut(s) 266
BfmI CTRYAG 1 cut(s) 97
BisI GCNGC 2 cut(s) 174, 285
BlsI GCNGC 2 cut(s) 175, 286
BmsI GCATC 5 cut(s) 22, 142, 177, 217, 239
Bsa29I ATCGAT 1 cut(s) 6
Bse21I CCTNAGG 1 cut(s) 168
BseCI ATCGAT 1 cut(s) 6
BseGI GGATG 4 cut(s) 157, 192, 230, 232
BseMII CTCAG 2 cut(s) 34, 182
BseRI GAGGAG 1 cut(s) 237
BseSI GKGCMC 1 cut(s) 106
BseXI GCAGC 2 cut(s) 185, 271
BshVI ATCGAT 1 cut(s) 6
BsiHKAI GWGCWC 2 cut(s) 73, 106
BsmAI GTCTC 2 cut(s) 197, 249
BsmBI CGTCTC 2 cut(s) 197, 249
BsmI GAATGC 1 cut(s) 145
Bsp1286I GDGCHC 3 cut(s) 21, 73, 106
Bsp143I GATC 3 cut(s) 3, 79, 93
BspCNI CTCAG 2 cut(s) 33, 181
BspDI ATCGAT 1 cut(s) 6
BssMI GATC 3 cut(s) 3, 79, 93
BssSI CACGAG 1 cut(s) 72
Bst2BI CACGAG 1 cut(s) 72
Bst4CI ACNGT 1 cut(s) 208
BstAPI GCANNNNNTGC 1 cut(s) 32
BstDEI CTNAG 2 cut(s) 20, 168
BstF5I GGATG 4 cut(s) 157, 192, 230, 232
BstKTI GATC 3 cut(s) 6, 82, 96
BstMAI GTCTC 2 cut(s) 197, 249
BstMBI GATC 3 cut(s) 3, 79, 93
BstMWI GCNNNNNNNGC 3 cut(s) 32, 110, 290
BstSFI CTRYAG 1 cut(s) 97
BstSLI GKGCMC 1 cut(s) 106
BstV1I GCAGC 2 cut(s) 185, 271
Bsu15I ATCGAT 1 cut(s) 6
Bsu36I CCTNAGG 1 cut(s) 168
BsuTUI ATCGAT 1 cut(s) 6
BtsCI GGATG 4 cut(s) 157, 192, 230, 232
ClaI ATCGAT 1 cut(s) 6
CseI GACGC 1 cut(s) 179
CviJI RGCY 2 cut(s) 19, 55
CviKI_1 RGCY 2 cut(s) 19, 55
DdeI CTNAG 2 cut(s) 20, 168
DpnI GATC 3 cut(s) 5, 81, 95
DpnII GATC 3 cut(s) 3, 79, 93
Eco24I GRGCYC 1 cut(s) 21
Eco57I CTGAAG 1 cut(s) 315
Eco81I CCTNAGG 1 cut(s) 168
EcoT22I ATGCAT 1 cut(s) 232
EcoT38I GRGCYC 1 cut(s) 21
Esp3I CGTCTC 2 cut(s) 197, 249
FaiI YATR 5 cut(s) 39, 115, 117, 122, 159
Fnu4HI GCNGC 2 cut(s) 174, 285
FokI GGATG 4 cut(s) 164, 199, 217, 239
FriOI GRGCYC 1 cut(s) 21
Fsp4HI GCNGC 2 cut(s) 174, 285
FspBI CTAG 1 cut(s) 266
GluI GCNGC 2 cut(s) 174, 285
HgaI GACGC 1 cut(s) 179
Hpy166II GTNNAC 1 cut(s) 104
Hpy188I TCNGA 3 cut(s) 23, 66, 138
Hpy188III TCNNGA 2 cut(s) 200, 234
Hpy8I GTNNAC 1 cut(s) 104
HpyCH4III ACNGT 1 cut(s) 208
HpyCH4V TGCA 2 cut(s) 104, 230
HpyF10VI GCNNNNNNNGC 3 cut(s) 32, 110, 290
HpyF3I CTNAG 2 cut(s) 20, 168
Kzo9I GATC 3 cut(s) 3, 79, 93
LmnI GCTCC 1 cut(s) 52
LpnPI CCDG 3 cut(s) 155, 162, 247
Lsp1109I GCAGC 2 cut(s) 185, 271
LweI GCATC 5 cut(s) 22, 142, 177, 217, 239
MaeI CTAG 1 cut(s) 266
MalI GATC 3 cut(s) 5, 81, 95
MboI GATC 3 cut(s) 3, 79, 93
MboII GAAGA 2 cut(s) 50, 89
MfeI CAATTG 1 cut(s) 311
MhlI GDGCHC 3 cut(s) 21, 73, 106
MluCI AATT 1 cut(s) 311
MnlI CCTC 5 cut(s) 141, 177, 217, 230, 258
Mph1103I ATGCAT 1 cut(s) 232
MseI TTAA 4 cut(s) 48, 89, 261, 319
MunI CAATTG 1 cut(s) 311
Mva1269I GAATGC 1 cut(s) 145
MwoI GCNNNNNNNGC 3 cut(s) 32, 110, 290
NdeII GATC 3 cut(s) 3, 79, 93
NsiI ATGCAT 1 cut(s) 232
PcsI WCGNNNNNNNCGW 1 cut(s) 79
PctI GAATGC 1 cut(s) 145
PkrI GCNGC 2 cut(s) 175, 286
SaqAI TTAA 4 cut(s) 48, 89, 261, 319
SatI GCNGC 2 cut(s) 174, 285
Sau3AI GATC 3 cut(s) 3, 79, 93
SduI GDGCHC 3 cut(s) 21, 73, 106
SetI ASST 5 cut(s) 57, 88, 220, 271, 282
SfaNI GCATC 5 cut(s) 22, 142, 177, 217, 239
SfcI CTRYAG 1 cut(s) 97
Sse9I AATT 1 cut(s) 311
SspMI CTAG 1 cut(s) 266
TaaI ACNGT 1 cut(s) 208
TaqI TCGA 3 cut(s) 6, 82, 273
TasI AATT 1 cut(s) 311
Tru1I TTAA 4 cut(s) 48, 89, 261, 319
Tru9I TTAA 4 cut(s) 48, 89, 261, 319
TseI GCWGC 2 cut(s) 173, 284
TspDTI ATGAA 1 cut(s) 50
VneI GTGCAC 1 cut(s) 102
XspI CTAG 1 cut(s) 266
Zsp2I ATGCAT 1 cut(s) 232
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.