FvH4_2g29120

Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
22658789 .. 22662964
4176 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g29120.t1

Sequence Viewer

Length: 2445 bp
ATGCCACGTTTGCTTCATGGGACACTTTATGCAACAATTTATGAAATTGATAAGATAAACAGTGGATGTGGAATCGGCTTACTGTGGACGTCACCTAAAAAATTTGTAGATCAAGTCAAGAGGCTAGTGCTATGCGGACCTGAGATTTCTGGATCCAAAATCTATGCAACAGTTGATCTAGACAAGGCTCGGGTGGCGCGAACTCGAATGGTTAACAATCCCCGCAATCCAATATGGAAGGAAGATTTTCATATCTACAGTGCTCATAACATCTCACATATTATCTTCACTGTCAAAGCTAATGATCCTATTGGTGCAACCCTCATAGGAAGAGCTTATGTACCTGTTGAAGATATCATTAAGGGCTATGTGGTGGACAGATGGGTTGAGATACTAGACGAAGAACACAATCCCATCCATGGAAACTCTAGAATTCATGTCAAGTTGCAATTCTCAAGTGTTATAGAAGATGCTCATTGGTCTCAGGGCCTCAGAAGTCCCAACTATGAGGGTGTTCCTTGGACCTTTTTCAATCAAAGACAGGGTTGCAAGGTTACTCTCTACCAAGATTCACATGTGGAGGATGATTTTCATCCTGGGATTCTTATGGCCAATGGCAAAATCCACGAGCCACAAAGATGTTGGGAGGACATATTTGATGCAATCACTAATGCAAAGCACTTGATCTACATAACTGGCTGGTCTGTCTACACTGAAATAAACTTGGTGAGGGATCCACAAAGGCGAAAACCAGGAGATGAGCTCACACTAGGACAGCTTCTCAAGAAAAAGGCTGATGAGGGTGTTCTAGTTCTCTTGCTTGTTTGGGATGACAGAACTTCTATTCCTGAATATAAGAAGGATGGTCTGATGACAACACATGATCAAGAAACTGAGGAGTACTTTCGAAACACAAAAGTTCGTTGCTTCCTTTGCCCTCGGAACCCTGATATTGGAAGAAGCTTTATTCAAGGTTTTGAGACTTCTACAATGTTCACTCACCATCAAAAAACAGTTGTGGTTGACAGTGAGATGGTTGGTGGAGATCCCTCGCAAAAAAGGAGGATTCTGAGCTTCGTAGGAGGCATTGATCTTTGTGATGGAAGATATGACATTCAGAAACACCCCCTATTTTCAACTCTAGGCACAACTCACCAGAAGGACTTCCATCAGCCCAACTTTCCAGGCGCTTCAATCCGAAAAGGCGGTCCAAGAGAGCCATGGCATGACATCCATTGCAAACTTGAAGGACCTGTTGCTTGGGATGTCTTGTACAACTTTGAGCAGAGGTGGAAAAAGCAAGTTGGTGACAAGTTCTTAATTTCTCTAAGCAAGCTTGAGCAAATCACAGTCCACCCTTTACAAAACATGTATTCAAATGACAGCGAAGCATGGAATGTTCAGCTGTTTCGTTCCATCGACAATGGAGCTGCTTTAGGATTTCCTGAAAAACCACTTGAAGCAACACAAAGGGGACTTGTCAGTGGGAAGAATAACATCATAGATAGAAGCATCCAGGATGCATATATCCACGCCATTCGCAGAGCGAAGAATTTCATTTACATAGAGAATCAGTACTTCCTTGGAAGCTCATTTGGGTGGAGATCGAAAGACATCAACGATGCGGATATCAATGCTTTGCATCTTATCCCAAAAGAGCTGTCACTGAAGATTGTTAGTAAAATTGAAGCAGGGGAGAGGTTTGCTGTCTACATTGTTCTCCCAATGTGGCCAGAAGGTATACCTGAGAGTGGTTCGGTTCAGGCTATCTTAGATTGGCAAAAAAGGACATTGGAGATGATGTACACTGATATCTCTGAGGCCATTCAGAGAAAGGGTTTGAATGCAAACCCTAGAGACTATCTTACATTCTTCTGCCTTGGGAACATGGAGAGCTTGAACGATGGAGAATATGTACCTCCAGAGTCTCCAGAGCCAGACACTGATTACATCAGAGCTCAGAACGCCCGGCGCTTCATGATTTATGTGCACTCAAAAATGATGATAGTTGATGATGAATACATTATCATTGGATCTGCCAACATAAACCAAAGGTCAATGGATGGATCAAGGGACTCCGAAATTGCTATGGGAGCATTTCAGACTAATCATCTGGCTAATTCCACAGATTCAGCAAGGGGAGAGATATATGCTTTCAGGGTGTCACTATGGTATGAACACTTTAAAGAGCTACACGATTCATTCTTGCATCCAGAATCAACGGAATGCATTCGGATAGTGAATGAACTTGCTCAAAGAAACTGGGATCTTTTCTCAAGTGACACTCTTCATGGTGATCTTCCAGGTCACCTTCTTCGATATCCTTTTGAGGTAAGCAAGACTGGAGTTCTAACAACACTGCCAGGGTTTGAACATTTCCCAGACACCAAGGCTAAAGTACTTGGCACCAAATCTGAGTACCTTCTTCCAATCCTCACCACCTAG

Protein Analysis

815

Amino Acids

93.2

Weight (kDa)

6.09

Isoelectric Point (pI)

39.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 51 - 130 2e-09 C2 domain
PLDc PF00614 661 - 686 3.4e-08 Phospholipase D Active site motif
PLDc_2 PF13091 661 - 693 2.8e-06 PLD-like domain
PLD_C PF12357 733 - 804 1.3e-26 Phospholipase D C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014668)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 92
AccB1I GGYRCC 1 cut(s) 2405
AccI GTMKAC 3 cut(s) 708, 1710, 1741
AccII CGCG 1 cut(s) 199
AciI CCGC 4 cut(s) 135, 223, 1206, 1625
AclWI GGATC 9 cut(s) 147, 160, 299, 728, 741, 1040, 2041, 2074, 2274
AcoI YGGCCR 2 cut(s) 609, 1730
AcsI RAATTY 3 cut(s) 101, 432, 1552
AcuI CTGAAG 1 cut(s) 1688
AcyI GRCGYC 1 cut(s) 89
AfaI GTAC 8 cut(s) 342, 902, 1274, 1577, 1805, 1917, 2400, 2420
AfiI CCNNNNNNNGG 3 cut(s) 419, 953, 1751
AflIII ACRYGT 2 cut(s) 574, 1368
AjnI CCWGG 6 cut(s) 595, 751, 1183, 1515, 2302, 2362
AloI GAACNNNNNNTCC 2 cut(s) 829, 861
Alw21I GWGCWC 4 cut(s) 265, 765, 1960, 1992
Alw26I GTCTC 4 cut(s) 486, 974, 1851, 1932
Alw44I GTGCAC 1 cut(s) 1988
AlwI GGATC 9 cut(s) 147, 160, 299, 728, 741, 1040, 2041, 2074, 2274
AlwNI CAGNNNCTG 1 cut(s) 1943
Ama87I CYCGRG 1 cut(s) 189
AoxI GGCC 4 cut(s) 487, 609, 1730, 1821
ApaLI GTGCAC 1 cut(s) 1988
ApeKI GCWGC 1 cut(s) 1430
ApoI RAATTY 3 cut(s) 101, 432, 1552
ArsI GACNNNNNNTTYG 4 cut(s) 1192, 1224, 1646, 1678
Asp700I GAANNNNTTC 4 cut(s) 246, 1163, 1553, 2229
AspLEI GCGC 3 cut(s) 199, 1190, 1974
AspS9I GGNCC 5 cut(s) 137, 487, 522, 1208, 1250
AsuC2I CCSGG 1 cut(s) 1969
AsuHPI GGTGA 8 cut(s) 84, 739, 992, 1145, 1319, 2300, 2306, 2428
AsuII TTCGAA 1 cut(s) 907
AvaI CYCGRG 1 cut(s) 189
AvaII GGWCC 4 cut(s) 137, 522, 1208, 1250
BaeGI GKGCMC 1 cut(s) 1992
BalI TGGCCA 2 cut(s) 611, 1732
BamHI GGATCC 2 cut(s) 152, 733
BanI GGYRCC 1 cut(s) 2405
BanII GRGCYC 2 cut(s) 765, 1960
BauI CACGAG 1 cut(s) 626
Bbv12I GWGCWC 4 cut(s) 265, 765, 1960, 1992
BbvI GCAGC 1 cut(s) 1417
BciT130I CCWGG 6 cut(s) 597, 753, 1185, 1517, 2304, 2364
BclI TGATCA 1 cut(s) 883
BcnI CCSGG 1 cut(s) 1969
BcoDI GTCTC 4 cut(s) 486, 974, 1851, 1932
BfaI CTAG 9 cut(s) 125, 179, 395, 429, 770, 809, 1142, 1854, 2443
BfmI CTRYAG 1 cut(s) 256
BfoI RGCGCY 2 cut(s) 1191, 1975
BisI GCNGC 1 cut(s) 1431
BlsI GCNGC 1 cut(s) 1432
BmcAI AGTACT 3 cut(s) 902, 1577, 2400
Bme1390I CCNGG 7 cut(s) 597, 753, 1185, 1517, 1969, 2304, 2364
Bme18I GGWCC 4 cut(s) 137, 522, 1208, 1250
BmeT110I CYCGRG 1 cut(s) 189
BmgT120I GGNCC 5 cut(s) 137, 487, 522, 1208, 1250
BmiI GGNNCC 4 cut(s) 154, 735, 944, 2407
BmrFI CCNGG 7 cut(s) 597, 753, 1185, 1517, 1969, 2304, 2364
BmrI ACTGGG 1 cut(s) 2272
BmsI GCATC 7 cut(s) 460, 649, 1510, 1521, 1612, 1651, 2218
BmuI ACTGGG 1 cut(s) 2272
BplI GAGNNNNNCTC 2 cut(s) 747, 779
BpmI CTGGAG 3 cut(s) 1905, 1914, 2364
Bpu14I TTCGAA 1 cut(s) 907
BpuEI CTTGAG 4 cut(s) 439, 767, 1358, 2260
BpuMI CCSGG 1 cut(s) 1969
BsaBI GATNNNNATC 1 cut(s) 591
BsaHI GRCGYC 1 cut(s) 89
BsaI GGTCTC 1 cut(s) 486
BsaJI CCNNGG 9 cut(s) 418, 518, 596, 938, 1220, 1582, 1879, 2363, 2388
BsaXI ACNNNNNCTCC 4 cut(s) 1787, 1817, 1899, 1929
Bsc4I CCNNNNNNNGG 3 cut(s) 419, 953, 1751
Bse1I ACTGG 3 cut(s) 700, 2267, 2347
Bse3DI GCAATG 1 cut(s) 1234
Bse8I GATNNNNATC 1 cut(s) 591
BseBI CCWGG 6 cut(s) 597, 753, 1185, 1517, 2304, 2364
BseDI CCNNGG 9 cut(s) 418, 518, 596, 938, 1220, 1582, 1879, 2363, 2388
BseJI GATNNNNATC 1 cut(s) 591
BseLI CCNNNNNNNGG 3 cut(s) 419, 953, 1751
BseMI GCAATG 1 cut(s) 1234
BseMII CTCAG 9 cut(s) 132, 497, 505, 885, 1061, 1737, 1809, 1973, 2406
BseNI ACTGG 3 cut(s) 700, 2267, 2347
BseRI GAGGAG 1 cut(s) 911
BseSI GKGCMC 1 cut(s) 1992
BseXI GCAGC 1 cut(s) 1417
Bsh1236I CGCG 1 cut(s) 199
BshFI GGCC 4 cut(s) 489, 611, 1732, 1823
BshNI GGYRCC 1 cut(s) 2405
BsiHKAI GWGCWC 4 cut(s) 265, 765, 1960, 1992
BsiHKCI CYCGRG 1 cut(s) 189
BsiSI CCGG 1 cut(s) 1969
BslFI GGGAC 4 cut(s) 34, 483, 1488, 2087
BslI CCNNNNNNNGG 3 cut(s) 419, 953, 1751
BsmAI GTCTC 4 cut(s) 486, 974, 1851, 1932
BsmFI GGGAC 4 cut(s) 34, 483, 1488, 2087
BsmI GAATGC 3 cut(s) 1849, 2229, 2231
BsnI GGCC 4 cut(s) 489, 611, 1732, 1823
Bso31I GGTCTC 1 cut(s) 486
BsoBI CYCGRG 1 cut(s) 189
Bsp119I TTCGAA 1 cut(s) 907
Bsp1286I GDGCHC 4 cut(s) 265, 765, 1960, 1992
Bsp1407I TGTACA 2 cut(s) 1272, 1803
Bsp19I CCATGG 2 cut(s) 418, 1220
BspACI CCGC 4 cut(s) 135, 223, 1206, 1625
BspANI GGCC 4 cut(s) 489, 611, 1732, 1823
BspCNI CTCAG 9 cut(s) 133, 496, 504, 886, 1062, 1738, 1810, 1972, 2407
BspFNI CGCG 1 cut(s) 199
BspHI TCATGA 1 cut(s) 1977
BspLI GGNNCC 4 cut(s) 154, 735, 944, 2407
BspPI GGATC 9 cut(s) 147, 160, 299, 728, 741, 1040, 2041, 2074, 2274
BspQI GCTCTTC 1 cut(s) 325
BspT104I TTCGAA 1 cut(s) 907
BspT107I GGYRCC 1 cut(s) 2405
BspTNI GGTCTC 1 cut(s) 486
BsrDI GCAATG 1 cut(s) 1234
BsrGI TGTACA 2 cut(s) 1272, 1803
BsrI ACTGG 3 cut(s) 700, 2267, 2347
BssECI CCNNGG 9 cut(s) 418, 518, 596, 938, 1220, 1582, 1879, 2363, 2388
BssNAI GTATAC 1 cut(s) 1742
BssNI GRCGYC 1 cut(s) 89
BssSI CACGAG 1 cut(s) 626
BssT1I CCWWGG 6 cut(s) 418, 518, 1220, 1582, 1879, 2388
Bst1107I GTATAC 1 cut(s) 1742
Bst2BI CACGAG 1 cut(s) 626
Bst2UI CCWGG 6 cut(s) 597, 753, 1185, 1517, 2304, 2364
Bst4CI ACNGT 8 cut(s) 62, 84, 172, 260, 292, 1015, 1028, 1351
Bst6I CTCTTC 2 cut(s) 325, 2292
BstACI GRCGYC 1 cut(s) 89
BstAUI TGTACA 2 cut(s) 1272, 1803
BstBI TTCGAA 1 cut(s) 907
BstC8I GCNNGC 1 cut(s) 1334
BstDSI CCRYGG 2 cut(s) 418, 1220
BstEII GGTNACC 1 cut(s) 2306
BstFNI CGCG 1 cut(s) 199
BstH2I RGCGCY 2 cut(s) 1191, 1975
BstHHI GCGC 3 cut(s) 199, 1190, 1974
BstMAI GTCTC 4 cut(s) 486, 974, 1851, 1932
BstMWI GCNNNNNNNGC 5 cut(s) 10, 194, 933, 1964, 2093
BstNI CCWGG 6 cut(s) 597, 753, 1185, 1517, 2304, 2364
BstNSI RCATGY 2 cut(s) 578, 1372
BstPI GGTNACC 1 cut(s) 2306
BstSCI CCNGG 7 cut(s) 595, 751, 1183, 1515, 1967, 2302, 2362
BstSFI CTRYAG 1 cut(s) 256
BstSLI GKGCMC 1 cut(s) 1992
BstUI CGCG 1 cut(s) 199
BstV1I GCAGC 1 cut(s) 1417
BstX2I RGATCY 5 cut(s) 152, 733, 1045, 2033, 2266
BstYI RGATCY 5 cut(s) 152, 733, 1045, 2033, 2266
BstZ17I GTATAC 1 cut(s) 1742
BsuRI GGCC 4 cut(s) 489, 611, 1732, 1823
BtgI CCRYGG 2 cut(s) 418, 1220
BtsI GCAGTG 1 cut(s) 2357
Cac8I GCNNGC 1 cut(s) 1334
CaiI CAGNNNCTG 1 cut(s) 1943
CciI TCATGA 1 cut(s) 1977
CfoI GCGC 3 cut(s) 199, 1190, 1974
Cfr13I GGNCC 5 cut(s) 137, 487, 522, 1208, 1250
Csp6I GTAC 8 cut(s) 341, 901, 1273, 1576, 1804, 1916, 2399, 2419
CviQI GTAC 8 cut(s) 341, 901, 1273, 1576, 1804, 1916, 2399, 2419
DraI TTTAAA 1 cut(s) 2185
EaeI YGGCCR 2 cut(s) 609, 1730
Eam1104I CTCTTC 2 cut(s) 325, 2292
EarI CTCTTC 2 cut(s) 325, 2292
Ecl136II GAGCTC 2 cut(s) 763, 1958
Eco130I CCWWGG 6 cut(s) 418, 518, 1220, 1582, 1879, 2388
Eco24I GRGCYC 2 cut(s) 765, 1960
Eco31I GGTCTC 1 cut(s) 486
Eco32I GATATC 4 cut(s) 355, 1630, 1813, 2321
Eco47I GGWCC 4 cut(s) 137, 522, 1208, 1250
Eco53kI GAGCTC 2 cut(s) 763, 1958
Eco57I CTGAAG 1 cut(s) 1688
Eco88I CYCGRG 1 cut(s) 189
Eco91I GGTNACC 1 cut(s) 2306
EcoICRI GAGCTC 2 cut(s) 763, 1958
EcoO109I RGGNCCY 2 cut(s) 487, 1250
EcoO65I GGTNACC 1 cut(s) 2306
EcoRI GAATTC 1 cut(s) 432
EcoRII CCWGG 6 cut(s) 595, 751, 1183, 1515, 2302, 2362
EcoRV GATATC 4 cut(s) 355, 1630, 1813, 2321
EcoT14I CCWWGG 6 cut(s) 418, 518, 1220, 1582, 1879, 2388
EcoT22I ATGCAT 2 cut(s) 1525, 2231
EcoT38I GRGCYC 2 cut(s) 765, 1960
ErhI CCWWGG 6 cut(s) 418, 518, 1220, 1582, 1879, 2388
FaqI GGGAC 4 cut(s) 34, 483, 1488, 2087
FauI CCCGC 1 cut(s) 230
FbaI TGATCA 1 cut(s) 883
FblI GTMKAC 3 cut(s) 708, 1710, 1741
Fnu4HI GCNGC 1 cut(s) 1431
FriOI GRGCYC 2 cut(s) 765, 1960
Fsp4HI GCNGC 1 cut(s) 1431
FspBI CTAG 9 cut(s) 125, 179, 395, 429, 770, 809, 1142, 1854, 2443
GlaI GCGC 3 cut(s) 198, 1189, 1973
GluI GCNGC 1 cut(s) 1431
GsuI CTGGAG 3 cut(s) 1905, 1914, 2364
HaeII RGCGCY 2 cut(s) 1191, 1975
HaeIII GGCC 4 cut(s) 489, 611, 1732, 1823
HapII CCGG 1 cut(s) 1969
HhaI GCGC 3 cut(s) 199, 1190, 1974
Hin1I GRCGYC 1 cut(s) 89
Hin6I GCGC 3 cut(s) 197, 1188, 1972
HinP1I GCGC 3 cut(s) 197, 1188, 1972
HincII GTYRAC 2 cut(s) 214, 1024
HindII GTYRAC 2 cut(s) 214, 1024
HindIII AAGCTT 2 cut(s) 961, 1334
HpaI GTTAAC 1 cut(s) 214
HpaII CCGG 1 cut(s) 1969
HphI GGTGA 8 cut(s) 84, 739, 992, 1145, 1319, 2300, 2306, 2428
HpyAV CCTTC 7 cut(s) 232, 853, 1153, 1241, 1730, 2321, 2432
HpyCH4III ACNGT 8 cut(s) 62, 84, 172, 260, 292, 1015, 1028, 1351
HpyCH4IV ACGT 2 cut(s) 7, 89
HpyF10VI GCNNNNNNNGC 5 cut(s) 10, 194, 933, 1964, 2093
HpySE526I ACGT 2 cut(s) 7, 89
Hsp92I GRCGYC 1 cut(s) 89
HspAI GCGC 3 cut(s) 197, 1188, 1972
Ksp22I TGATCA 1 cut(s) 883
KspAI GTTAAC 1 cut(s) 214
LguI GCTCTTC 1 cut(s) 325
LmnI GCTCC 2 cut(s) 1427, 2093
Lsp1109I GCAGC 1 cut(s) 1417
LweI GCATC 7 cut(s) 460, 649, 1510, 1521, 1612, 1651, 2218
MaeI CTAG 9 cut(s) 125, 179, 395, 429, 770, 809, 1142, 1854, 2443
MaeII ACGT 2 cut(s) 7, 89
MaeIII GTNAC 7 cut(s) 90, 553, 1307, 1662, 2163, 2279, 2306
MflI RGATCY 5 cut(s) 152, 733, 1045, 2033, 2266
MhlI GDGCHC 4 cut(s) 265, 765, 1960, 1992
MlsI TGGCCA 2 cut(s) 611, 1732
MluNI TGGCCA 2 cut(s) 611, 1732
MlyI GAGTC 2 cut(s) 1934, 2069
Mox20I TGGCCA 2 cut(s) 611, 1732
Mph1103I ATGCAT 2 cut(s) 1525, 2231
MroXI GAANNNNTTC 4 cut(s) 246, 1163, 1553, 2229
MscI TGGCCA 2 cut(s) 611, 1732
MseI TTAA 4 cut(s) 213, 360, 1319, 2184
MslI CAYNNNNRTG 2 cut(s) 637, 1597
Msp20I TGGCCA 2 cut(s) 611, 1732
MspA1I CMGCKG 1 cut(s) 1405
MspI CCGG 1 cut(s) 1969
MspR9I CCNGG 7 cut(s) 597, 753, 1185, 1517, 1969, 2304, 2364
Mva1269I GAATGC 3 cut(s) 1849, 2229, 2231
MvaI CCWGG 6 cut(s) 597, 753, 1185, 1517, 2304, 2364
MvnI CGCG 1 cut(s) 199
MwoI GCNNNNNNNGC 5 cut(s) 10, 194, 933, 1964, 2093
NciI CCSGG 1 cut(s) 1969
NcoI CCATGG 2 cut(s) 418, 1220
NlaIV GGNNCC 4 cut(s) 154, 735, 944, 2407
NmuCI GTSAC 6 cut(s) 90, 1307, 1662, 2163, 2279, 2306
NsiI ATGCAT 2 cut(s) 1525, 2231
NspI RCATGY 2 cut(s) 578, 1372
NspV TTCGAA 1 cut(s) 907
PagI TCATGA 1 cut(s) 1977
PciI ACATGT 2 cut(s) 574, 1368
PciSI GCTCTTC 1 cut(s) 325
PcsI WCGNNNNNNNCGW 1 cut(s) 196
PctI GAATGC 3 cut(s) 1849, 2229, 2231
PdmI GAANNNNTTC 4 cut(s) 246, 1163, 1553, 2229
PfeI GAWTC 8 cut(s) 72, 569, 601, 1066, 1570, 2129, 2198, 2216
PfoI TCCNGGA 1 cut(s) 1515
PkrI GCNGC 1 cut(s) 1432
PleI GAGTC 2 cut(s) 1933, 2069
PpsI GAGTC 2 cut(s) 1933, 2069
PpuMI RGGWCCY 1 cut(s) 1250
PscI ACATGT 2 cut(s) 574, 1368
Psp124BI GAGCTC 2 cut(s) 765, 1960
Psp5II RGGWCCY 1 cut(s) 1250
Psp6I CCWGG 6 cut(s) 595, 751, 1183, 1515, 2302, 2362
PspEI GGTNACC 1 cut(s) 2306
PspGI CCWGG 6 cut(s) 595, 751, 1183, 1515, 2302, 2362
PspN4I GGNNCC 4 cut(s) 154, 735, 944, 2407
PspPI GGNCC 5 cut(s) 137, 487, 522, 1208, 1250
PspPPI RGGWCCY 1 cut(s) 1250
PstNI CAGNNNCTG 1 cut(s) 1943
PsuI RGATCY 5 cut(s) 152, 733, 1045, 2033, 2266
PvuII CAGCTG 1 cut(s) 1405
RsaI GTAC 8 cut(s) 342, 902, 1274, 1577, 1805, 1917, 2400, 2420
RsaNI GTAC 8 cut(s) 341, 901, 1273, 1576, 1804, 1916, 2399, 2419
RseI CAYNNNNRTG 2 cut(s) 637, 1597
SacI GAGCTC 2 cut(s) 765, 1960
SapI GCTCTTC 1 cut(s) 325
SaqAI TTAA 4 cut(s) 213, 360, 1319, 2184
SatI GCNGC 1 cut(s) 1431
Sau96I GGNCC 5 cut(s) 137, 487, 522, 1208, 1250
ScaI AGTACT 3 cut(s) 902, 1577, 2400
SchI GAGTC 2 cut(s) 1934, 2069
ScrFI CCNGG 7 cut(s) 597, 753, 1185, 1517, 1969, 2304, 2364
SduI GDGCHC 4 cut(s) 265, 765, 1960, 1992
SfaNI GCATC 7 cut(s) 460, 649, 1510, 1521, 1612, 1651, 2218
SfcI CTRYAG 1 cut(s) 256
SfuI TTCGAA 1 cut(s) 907
SinI GGWCC 4 cut(s) 137, 522, 1208, 1250
SmiMI CAYNNNNRTG 2 cut(s) 637, 1597
SmlI CTYRAG 4 cut(s) 454, 782, 1337, 2275
SmoI CTYRAG 4 cut(s) 454, 782, 1337, 2275
SsiI CCGC 4 cut(s) 135, 223, 1206, 1625
SspMI CTAG 9 cut(s) 125, 179, 395, 429, 770, 809, 1142, 1854, 2443
SstI GAGCTC 2 cut(s) 765, 1960
StyD4I CCNGG 7 cut(s) 595, 751, 1183, 1515, 1967, 2302, 2362
StyI CCWWGG 6 cut(s) 418, 518, 1220, 1582, 1879, 2388
TaaI ACNGT 8 cut(s) 62, 84, 172, 260, 292, 1015, 1028, 1351
TaiI ACGT 2 cut(s) 10, 92
TaqI TCGA 5 cut(s) 205, 907, 1419, 1607, 2317
TatI WGTACW 5 cut(s) 900, 1272, 1575, 1803, 2398
TfiI GAWTC 8 cut(s) 72, 569, 601, 1066, 1570, 2129, 2198, 2216
Tru1I TTAA 4 cut(s) 213, 360, 1319, 2184
Tru9I TTAA 4 cut(s) 213, 360, 1319, 2184
TseFI GTSAC 6 cut(s) 90, 1307, 1662, 2163, 2279, 2306
TseI GCWGC 1 cut(s) 1430
Tsp45I GTSAC 6 cut(s) 90, 1307, 1662, 2163, 2279, 2306
TspGWI ACGGA 1 cut(s) 2237
VneI GTGCAC 1 cut(s) 1988
VpaK11BI GGWCC 4 cut(s) 137, 522, 1208, 1250
XapI RAATTY 3 cut(s) 101, 432, 1552
XbaI TCTAGA 2 cut(s) 178, 428
XceI RCATGY 2 cut(s) 578, 1372
XcmI CCANNNNNNNNNTGG 2 cut(s) 639, 1218
XmiI GTMKAC 3 cut(s) 708, 1710, 1741
XmnI GAANNNNTTC 4 cut(s) 246, 1163, 1553, 2229
XspI CTAG 9 cut(s) 125, 179, 395, 429, 770, 809, 1142, 1854, 2443
ZraI GACGTC 1 cut(s) 90
ZrmI AGTACT 3 cut(s) 902, 1577, 2400
Zsp2I ATGCAT 2 cut(s) 1525, 2231
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.