Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0014668

Physical Location & Seq

Genomic Coordinates Forward (+)

10498147 .. 10501188

Gene Structure 3042 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00170010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2244 bp

ATGATAAACAATCCCCACAACCCCATATGGAAGGAAGAGTTCCACATCTACAGTGCTCATTTCATCTCACGCATTATCTTCACTGTCAAAGCGAATGATCCTATTGGTGCCACACTCATAGGAAGAGCTTATATACCTGTTGAAGATATCATAAAGGATTATGTGGTGGACAGATGGGTTGAGATACTAGATGAAGAACACAATCCCATCCATGGAAACTCTAGAATTCATGTCAAGTTGCAATTCTCAAGTGTTACAGAAGATGCTCATTGGTCTCAGGGACTCAGAAGTCCTGACTATGAGGGTGTTCCTTGGACCTTTTTCAATCAAAGACAGGGTTGCAGGGTTACCCTCTACCAAGATTCGCATGTCGCGGATAATTTTAATCCTGGGATTCCTATGGCCAATGGGGGATTCTACGAGCCACGAAGATGTTGGGAGGACATATTTGATGCAATCACTAATGCAAAACACTTGATCTACATAACTGGCTGGTCTGTCTCCACTGAAATAAACTTGCTGAGGGATCCACAAAGGCGAAAAGCAGGAGATGAGCTCACATTAGGACAGCTTCTCAAGAAAAAGGCTGATGAGGGTGTTCTAGTTCTCTTGCTTGTTTGGGATGACAGAACTTCTATTCCTCAATTTAAAAAGGATGGTCTGATGACAACACATGATCAAGAAACTGAGGAGTACTTTCGAAACACCAAAGTTCATTGCTTCCTTTGCCCGCGGAACCCTGATCTTGGTAGAAGCATTATTCAAGGTTTTGAGACTGCTACAATGTTCACACACCATCAAAAAACAGTTGTAGTTGACAGTGAGATAGTCGGTGGAGATCCCTCGCAAAAAAGGAGGATTCTGAGCTTTGTTGGAGGCATTGATCTTTGTGATGGAAGATATGACACTCAGAAACACCCCCTATTTTCAACTCTAGGCACAACTCACAATAAGGACTTCCATCAGCCAAACTTTCCAGGCTCTTCGATTAGAAAAGGCGGTCCAAGAGAGCCATGGCATGATATCCATTGCAAACTTGAAGGGCCTGTTGCTTGGGATGTCTTGTACAACTTTGAGCAGAGGTGGAAAAAGCAAGTTGGTGACAAGTTCTTATTTTCACTAAGCAAGCTTGAGGAAATCACAGTTCACCCTTTACAGAACATGCTATCAAATTCAAATGACAGTGAAGCATGGAATGTTCAGCTGTTTCGTTCCATCGACAATGGAGCTGCTTTGGGATTTCCTGAGAATCCACTTGAAGCAACGCAAAGGGGACTTGTGAGTGGGAAGAACAACATCATAGACAGAAGCATCCAGGATGCATATATCCACGCCATTCGCCGAGCAAAGAATTTCATTTACATAGAGAATCAGTACTTCCTTGGAAGCTCATTTGGGTGGAGATCAAAAGATATCAAGGATGAGGATATTAATGCTCTGCATCTTATCCCAAAGGAGCTGTCACTGAAGATTGTTAGTAAAATTGAAGCAGGGGAGAGGTTTGCTGTCTACATTGTTCTCCCAATGTGGCCAGAAGGTATACCCGAGAGTGGTTCTGTTCAGGCTATATTAGATTGGCAAAAAAGGACATTGGAGATGATGTACACTGATATCTCTGAGGCCCTTCAGAGAAAGGGTTTGAATGCAAACCCTAGAGACTATCTTACATTCTTCTGCCTTGGGAACCGGGAGACCGTGAAGGATGGAGAATATGTACCTCCAGAGACTCCAGAGCCAGACACTGATTACATCAGAGCTCAGAAGGCCCGGCGCTTCATGATTTATGTGCACTCAAAAATGATGATAGTTGATGATGAATACATTATCATTGGATCTGCCAACATAAACCAAAGGTCAATGGATGGGGCAAGGGACTCCGAAATTGCTATGGGAGCATTTCAGACTAATTATTTGGCTAATTCCACTGACCCAGTTACGGGAGAGATATATGCTTTCAGGGTGACTCTATGGTATGAGCACCTTAAAGTGCTTGACAGCTCTTTCTTGCATCCAGAATCAATGGAATGCATCCGGACAGTGAATCACCTTGCGGAAACAAACTGGGATCTTTTCTCAAGTGACACTTTTCCTGGTGACCTTCCCGGTCACCTTCTTCGATATCCTGTTGAGGTAAGCAAGACTGGAGCTCTAACAACACTGCCTGGGTTCGAACATTTCCCCGACACCAAGGCTCGAGTTTTTGGCAACAAGTCTGAGTACCTTCTTCCACTCCTTACCACCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004620 GO:0004630 GO:0006629 GO:0006643 GO:0006950 GO:0006970 GO:0007275 GO:0008081 GO:0008150 GO:0008152 GO:0008610 GO:0009056 GO:0009058 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010035 GO:0016042 GO:0016298 GO:0016787 GO:0016788 GO:0022622 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0042578 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0046466 GO:0048364 GO:0048731 GO:0048856 GO:0050896 GO:0071704 GO:0097305 GO:0099402 GO:1901575 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 ko01110 ko04014 ko04024 ko04071 ko04072 ko04144 ko04666 ko04724 ko04912 ko05231 map00564 map00565 map01100 map01110 map04014 map04024 map04071 map04072 map04144 map04666 map04724 map04912 map05231

Pfam Domains

Protein Families

C2 PLD_C PLDc

Protein Analysis

747

Amino Acids

85.58

Weight (kDa)

5.76

Isoelectric Point (pI)

39.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PLDc	PF00614	594 - 619	3.1e-08	Phospholipase D Active site motif
PLDc_2	PF13091	594 - 625	3.6e-06	PLD-like domain
PLD_C	PF12357	665 - 737	1.1e-27	Phospholipase D C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014668)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g29120
malus_domestica	MD15G1125000.v1.1
prunus_persica	Prupe.1G480500_v2.0.a1 Prupe.1G480500_v2.0.a1
pyrus_communis	pycom15g11260
rosa_chinensis	RchiOBHm_Chr6g0298001
rosa_laevigata	RLG00000011544
rosa_multiflora	Rmu_sc0002800.1_g000023
rosa_roxburghii	Rroxscaffold_7G00170010 Rroxscaffold_7G00178840
rosa_rugosa	Rorug06G0277800 Rorug06G0277900
rosa_samantha	Rh6AG388200 Rh6BG396400 Rh6CG402400 Rh6DG388600
rosa_wichuraiana	Rw6G033880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	288
AccB1I	GGYRCC	1 cut(s)	107
AccI	GTMKAC	2 cut(s)	1509, 1540
AccII	CGCG	2 cut(s)	374, 733
AccIII	TCCGGA	1 cut(s)	2031
AciI	CCGC	5 cut(s)	374, 731, 733, 999, 2051
AclWI	GGATC	6 cut(s)	92, 521, 534, 833, 1840, 2073
AcoI	YGGCCR	2 cut(s)	402, 1529
AcsI	RAATTY	3 cut(s)	225, 1171, 1351
AcuI	CTGAAG	2 cut(s)	1487, 1610
AfaI	GTAC	6 cut(s)	695, 1067, 1376, 1604, 1716, 2219
AfiI	CCNNNNNNNGG	5 cut(s)	212, 746, 1550, 1936, 1937
AgsI	TTSAA	9 cut(s)	143, 325, 764, 930, 1040, 1176, 1259, 1487, 1642
AjnI	CCWGG	5 cut(s)	388, 976, 1314, 2089, 2161
AjuI	GAANNNNNNNTTGG	2 cut(s)	398, 430
AloI	GAACNNNNNNTCC	2 cut(s)	622, 654
Alw21I	GWGCWC	6 cut(s)	58, 558, 1759, 1791, 1980, 2149
Alw26I	GTCTC	6 cut(s)	279, 505, 767, 1650, 1685, 1718
Alw44I	GTGCAC	1 cut(s)	1787
AlwI	GGATC	6 cut(s)	92, 521, 534, 833, 1840, 2073
AlwNI	CAGNNNCTG	1 cut(s)	1742
Ama87I	CYCGRG	2 cut(s)	1544, 2193
Aor13HI	TCCGGA	1 cut(s)	2031
AoxI	GGCC	5 cut(s)	402, 1043, 1529, 1620, 1764
ApaLI	GTGCAC	1 cut(s)	1787
ApeKI	GCWGC	1 cut(s)	1229
ApoI	RAATTY	3 cut(s)	225, 1171, 1351
ArsI	GACNNNNNNTTYG	4 cut(s)	1445, 1477, 1894, 1926
AseI	ATTAAT	1 cut(s)	1431
AspLEI	GCGC	1 cut(s)	1773
AspS9I	GGNCC	5 cut(s)	315, 1001, 1043, 1621, 1765
AsuC2I	CCSGG	3 cut(s)	1688, 1768, 2103
AsuHPI	GGTGA	6 cut(s)	1112, 1139, 1972, 2036, 2099, 2105
AsuII	TTCGAA	2 cut(s)	700, 2169
AvaI	CYCGRG	2 cut(s)	1544, 2193
AvaII	GGWCC	2 cut(s)	315, 1001
BaeGI	GKGCMC	1 cut(s)	1791
BalI	TGGCCA	2 cut(s)	404, 1531
BamHI	GGATCC	1 cut(s)	526
BanI	GGYRCC	1 cut(s)	107
BanII	GRGCYC	3 cut(s)	558, 1759, 2149
Bbv12I	GWGCWC	6 cut(s)	58, 558, 1759, 1791, 1980, 2149
BbvCI	CCTCAGC	1 cut(s)	521
BbvI	GCAGC	1 cut(s)	1216
BccI	CCATC	9 cut(s)	168, 215, 650, 804, 887, 969, 1223, 1697, 1856
BciT130I	CCWGG	5 cut(s)	390, 978, 1316, 2091, 2163
BclI	TGATCA	1 cut(s)	676
BcnI	CCSGG	3 cut(s)	1688, 1768, 2103
BcoDI	GTCTC	6 cut(s)	279, 505, 767, 1650, 1685, 1718
BfaI	CTAG	6 cut(s)	188, 222, 602, 935, 1653, 2242
BfmI	CTRYAG	1 cut(s)	49
BfoI	RGCGCY	1 cut(s)	1774
BisI	GCNGC	1 cut(s)	1230
BlsI	GCNGC	1 cut(s)	1231
BmcAI	AGTACT	2 cut(s)	695, 1376
Bme1390I	CCNGG	8 cut(s)	390, 978, 1316, 1688, 1768, 2091, 2103, 2163
Bme18I	GGWCC	2 cut(s)	315, 1001
BmeT110I	CYCGRG	2 cut(s)	1544, 2193
BmgT120I	GGNCC	5 cut(s)	315, 1001, 1043, 1621, 1765
BmiI	GGNNCC	4 cut(s)	109, 528, 737, 1685
BmrFI	CCNGG	8 cut(s)	390, 978, 1316, 1688, 1768, 2091, 2103, 2163
BmrI	ACTGGG	2 cut(s)	1925, 2071
BmsI	GCATC	7 cut(s)	253, 442, 1309, 1320, 1450, 2017, 2037
BmuI	ACTGGG	2 cut(s)	1925, 2071
BplI	GAGNNNNNCTC	2 cut(s)	540, 572
BpmI	CTGGAG	3 cut(s)	1704, 1713, 2163
Bpu10I	CCTNAGC	1 cut(s)	521
Bpu14I	TTCGAA	2 cut(s)	700, 2169
BpuEI	CTTGAG	4 cut(s)	232, 560, 1151, 2059
BpuMI	CCSGG	3 cut(s)	1688, 1768, 2103
BsaI	GGTCTC	2 cut(s)	279, 1685
BsaJI	CCNNGG	9 cut(s)	211, 311, 389, 731, 1013, 1381, 1678, 2162, 2187
BsaWI	WCCGGW	1 cut(s)	2031
BsaXI	ACNNNNNCTCC	4 cut(s)	1586, 1616, 1698, 1728
Bsc4I	CCNNNNNNNGG	5 cut(s)	212, 746, 1550, 1936, 1937
Bse1I	ACTGG	4 cut(s)	493, 1931, 2066, 2146
Bse3DI	GCAATG	2 cut(s)	715, 1027
BseAI	TCCGGA	1 cut(s)	2031
BseBI	CCWGG	5 cut(s)	390, 978, 1316, 2091, 2163
BseDI	CCNNGG	9 cut(s)	211, 311, 389, 731, 1013, 1381, 1678, 2162, 2187
BseLI	CCNNNNNNNGG	5 cut(s)	212, 746, 1550, 1936, 1937
BseMI	GCAATG	2 cut(s)	715, 1027
BseNI	ACTGG	4 cut(s)	493, 1931, 2066, 2146
BseRI	GAGGAG	1 cut(s)	704
BseSI	GKGCMC	1 cut(s)	1791
BseXI	GCAGC	1 cut(s)	1216
Bsh1236I	CGCG	2 cut(s)	374, 733
BshFI	GGCC	5 cut(s)	404, 1045, 1531, 1622, 1766
BshNI	GGYRCC	1 cut(s)	107
BsiHKAI	GWGCWC	6 cut(s)	58, 558, 1759, 1791, 1980, 2149
BsiHKCI	CYCGRG	2 cut(s)	1544, 2193
BsiSI	CCGG	4 cut(s)	1687, 1768, 2032, 2103
BslFI	GGGAC	3 cut(s)	294, 1287, 1886
BslI	CCNNNNNNNGG	5 cut(s)	212, 746, 1550, 1936, 1937
BsmAI	GTCTC	6 cut(s)	279, 505, 767, 1650, 1685, 1718
BsmFI	GGGAC	3 cut(s)	294, 1287, 1886
BsmI	GAATGC	2 cut(s)	1648, 2030
BsnI	GGCC	5 cut(s)	404, 1045, 1531, 1622, 1766
Bso31I	GGTCTC	2 cut(s)	279, 1685
BsoBI	CYCGRG	2 cut(s)	1544, 2193
Bsp119I	TTCGAA	2 cut(s)	700, 2169
Bsp1286I	GDGCHC	6 cut(s)	58, 558, 1759, 1791, 1980, 2149
Bsp13I	TCCGGA	1 cut(s)	2031
Bsp1407I	TGTACA	2 cut(s)	1065, 1602
Bsp19I	CCATGG	2 cut(s)	211, 1013
BspACI	CCGC	5 cut(s)	374, 731, 733, 999, 2051
BspANI	GGCC	5 cut(s)	404, 1045, 1531, 1622, 1766
BspEI	TCCGGA	1 cut(s)	2031
BspFNI	CGCG	2 cut(s)	374, 733
BspHI	TCATGA	1 cut(s)	1776
BspLI	GGNNCC	4 cut(s)	109, 528, 737, 1685
BspPI	GGATC	6 cut(s)	92, 521, 534, 833, 1840, 2073
BspQI	GCTCTTC	2 cut(s)	118, 988
BspT104I	TTCGAA	2 cut(s)	700, 2169
BspT107I	GGYRCC	1 cut(s)	107
BspTNI	GGTCTC	2 cut(s)	279, 1685
BsrDI	GCAATG	2 cut(s)	715, 1027
BsrGI	TGTACA	2 cut(s)	1065, 1602
BsrI	ACTGG	4 cut(s)	493, 1931, 2066, 2146
BssECI	CCNNGG	9 cut(s)	211, 311, 389, 731, 1013, 1381, 1678, 2162, 2187
BssNAI	GTATAC	1 cut(s)	1541
BssT1I	CCWWGG	6 cut(s)	211, 311, 1013, 1381, 1678, 2187
Bst1107I	GTATAC	1 cut(s)	1541
Bst2UI	CCWGG	5 cut(s)	390, 978, 1316, 2091, 2163
Bst4CI	ACNGT	8 cut(s)	53, 85, 808, 821, 1144, 1184, 1696, 2038
Bst6I	CTCTTC	3 cut(s)	30, 118, 988
BstAUI	TGTACA	2 cut(s)	1065, 1602
BstBI	TTCGAA	2 cut(s)	700, 2169
BstC8I	GCNNGC	2 cut(s)	731, 1127
BstDSI	CCRYGG	3 cut(s)	211, 731, 1013
BstEII	GGTNACC	3 cut(s)	346, 2093, 2105
BstFNI	CGCG	2 cut(s)	374, 733
BstH2I	RGCGCY	1 cut(s)	1774
BstHHI	GCGC	1 cut(s)	1773
BstMAI	GTCTC	6 cut(s)	279, 505, 767, 1650, 1685, 1718
BstMWI	GCNNNNNNNGC	3 cut(s)	726, 1763, 1892
BstNI	CCWGG	5 cut(s)	390, 978, 1316, 2091, 2163
BstNSI	RCATGY	2 cut(s)	371, 1165
BstPI	GGTNACC	3 cut(s)	346, 2093, 2105
BstSCI	CCNGG	8 cut(s)	388, 976, 1314, 1686, 1766, 2089, 2101, 2161
BstSFI	CTRYAG	1 cut(s)	49
BstSLI	GKGCMC	1 cut(s)	1791
BstUI	CGCG	2 cut(s)	374, 733
BstV1I	GCAGC	1 cut(s)	1216
BstX2I	RGATCY	4 cut(s)	526, 838, 1832, 2065
BstYI	RGATCY	4 cut(s)	526, 838, 1832, 2065
BstZ17I	GTATAC	1 cut(s)	1541
BsuRI	GGCC	5 cut(s)	404, 1045, 1531, 1622, 1766
BtgI	CCRYGG	3 cut(s)	211, 731, 1013
BtsI	GCAGTG	1 cut(s)	2156
Cac8I	GCNNGC	2 cut(s)	731, 1127
CaiI	CAGNNNCTG	1 cut(s)	1742
CciI	TCATGA	1 cut(s)	1776
CfoI	GCGC	1 cut(s)	1773
Cfr13I	GGNCC	5 cut(s)	315, 1001, 1043, 1621, 1765
Cfr42I	CCGCGG	1 cut(s)	734
Csp6I	GTAC	6 cut(s)	694, 1066, 1375, 1603, 1715, 2218
CviAII	CATG	9 cut(s)	212, 230, 368, 674, 1014, 1019, 1162, 1191, 1777
CviQI	GTAC	6 cut(s)	694, 1066, 1375, 1603, 1715, 2218
DraI	TTTAAA	1 cut(s)	649
DrdI	GACNNNNNNGTC	1 cut(s)	288
DseDI	GACNNNNNNGTC	1 cut(s)	288
EaeI	YGGCCR	2 cut(s)	402, 1529
Eam1104I	CTCTTC	3 cut(s)	30, 118, 988
EarI	CTCTTC	3 cut(s)	30, 118, 988
Ecl136II	GAGCTC	3 cut(s)	556, 1757, 2147
Eco130I	CCWWGG	6 cut(s)	211, 311, 1013, 1381, 1678, 2187
Eco24I	GRGCYC	3 cut(s)	558, 1759, 2149
Eco31I	GGTCTC	2 cut(s)	279, 1685
Eco32I	GATATC	5 cut(s)	148, 1024, 1414, 1612, 2120
Eco47I	GGWCC	2 cut(s)	315, 1001
Eco53kI	GAGCTC	3 cut(s)	556, 1757, 2147
Eco57I	CTGAAG	2 cut(s)	1487, 1610
Eco88I	CYCGRG	2 cut(s)	1544, 2193
Eco91I	GGTNACC	3 cut(s)	346, 2093, 2105
EcoICRI	GAGCTC	3 cut(s)	556, 1757, 2147
EcoO109I	RGGNCCY	2 cut(s)	1043, 1621
EcoO65I	GGTNACC	3 cut(s)	346, 2093, 2105
EcoRI	GAATTC	1 cut(s)	225
EcoRII	CCWGG	5 cut(s)	388, 976, 1314, 2089, 2161
EcoRV	GATATC	5 cut(s)	148, 1024, 1414, 1612, 2120
EcoT14I	CCWWGG	6 cut(s)	211, 311, 1013, 1381, 1678, 2187
EcoT22I	ATGCAT	2 cut(s)	1324, 2030
EcoT38I	GRGCYC	3 cut(s)	558, 1759, 2149
ErhI	CCWWGG	6 cut(s)	211, 311, 1013, 1381, 1678, 2187
FaeI	CATG	9 cut(s)	215, 233, 371, 677, 1017, 1022, 1165, 1194, 1780
FalI	AAGNNNNNCTT	2 cut(s)	2068, 2100
FaqI	GGGAC	3 cut(s)	294, 1287, 1886
FatI	CATG	9 cut(s)	211, 229, 367, 673, 1013, 1018, 1161, 1190, 1776
FauI	CCCGC	1 cut(s)	738
FauNDI	CATATG	1 cut(s)	26
FbaI	TGATCA	1 cut(s)	676
FblI	GTMKAC	2 cut(s)	1509, 1540
Fnu4HI	GCNGC	1 cut(s)	1230
FriOI	GRGCYC	3 cut(s)	558, 1759, 2149
Fsp4HI	GCNGC	1 cut(s)	1230
FspBI	CTAG	6 cut(s)	188, 222, 602, 935, 1653, 2242
GlaI	GCGC	1 cut(s)	1772
GluI	GCNGC	1 cut(s)	1230
GsuI	CTGGAG	3 cut(s)	1704, 1713, 2163
HaeII	RGCGCY	1 cut(s)	1774
HaeIII	GGCC	5 cut(s)	404, 1045, 1531, 1622, 1766
HapII	CCGG	4 cut(s)	1687, 1768, 2032, 2103
HhaI	GCGC	1 cut(s)	1773
Hin1II	CATG	9 cut(s)	215, 233, 371, 677, 1017, 1022, 1165, 1194, 1780
Hin6I	GCGC	1 cut(s)	1771
HinP1I	GCGC	1 cut(s)	1771
HincII	GTYRAC	1 cut(s)	817
HindII	GTYRAC	1 cut(s)	817
HindIII	AAGCTT	1 cut(s)	1127
HpaII	CCGG	4 cut(s)	1687, 1768, 2032, 2103
HphI	GGTGA	6 cut(s)	1112, 1139, 1972, 2036, 2099, 2105
Hpy166II	GTNNAC	8 cut(s)	169, 789, 817, 1147, 1510, 1541, 1605, 1789
Hpy8I	GTNNAC	8 cut(s)	169, 789, 817, 1147, 1510, 1541, 1605, 1789
HpyAV	CCTTC	9 cut(s)	25, 1034, 1529, 1634, 1693, 1756, 2108, 2120, 2231
HpyCH4III	ACNGT	8 cut(s)	53, 85, 808, 821, 1144, 1184, 1696, 2038
HpyF10VI	GCNNNNNNNGC	3 cut(s)	726, 1763, 1892
Hsp92II	CATG	9 cut(s)	215, 233, 371, 677, 1017, 1022, 1165, 1194, 1780
HspAI	GCGC	1 cut(s)	1771
Kpn2I	TCCGGA	1 cut(s)	2031
Ksp22I	TGATCA	1 cut(s)	676
KspI	CCGCGG	1 cut(s)	734
LguI	GCTCTTC	2 cut(s)	118, 988
LmnI	GCTCC	4 cut(s)	1226, 1456, 1892, 2144
Lsp1109I	GCAGC	1 cut(s)	1216
LweI	GCATC	7 cut(s)	253, 442, 1309, 1320, 1450, 2017, 2037
MaeI	CTAG	6 cut(s)	188, 222, 602, 935, 1653, 2242
MaeIII	GTNAC	9 cut(s)	253, 346, 1100, 1461, 1933, 1960, 2078, 2093, 2105
MflI	RGATCY	4 cut(s)	526, 838, 1832, 2065
MhlI	GDGCHC	6 cut(s)	58, 558, 1759, 1791, 1980, 2149
MlsI	TGGCCA	2 cut(s)	404, 1531
MluNI	TGGCCA	2 cut(s)	404, 1531
MlyI	GAGTC	4 cut(s)	276, 1720, 1868, 1957
MmeI	TCCRAC	1 cut(s)	853
Mox20I	TGGCCA	2 cut(s)	404, 1531
Mph1103I	ATGCAT	2 cut(s)	1324, 2030
MroI	TCCGGA	1 cut(s)	2031
MscI	TGGCCA	2 cut(s)	404, 1531
MseI	TTAA	4 cut(s)	384, 648, 1431, 1983
MslI	CAYNNNNRTG	2 cut(s)	430, 1396
Msp20I	TGGCCA	2 cut(s)	404, 1531
MspA1I	CMGCKG	2 cut(s)	733, 1204
MspI	CCGG	4 cut(s)	1687, 1768, 2032, 2103
MspR9I	CCNGG	8 cut(s)	390, 978, 1316, 1688, 1768, 2091, 2103, 2163
Mva1269I	GAATGC	2 cut(s)	1648, 2030
MvaI	CCWGG	5 cut(s)	390, 978, 1316, 2091, 2163
MvnI	CGCG	2 cut(s)	374, 733
MwoI	GCNNNNNNNGC	3 cut(s)	726, 1763, 1892
NciI	CCSGG	3 cut(s)	1688, 1768, 2103
NcoI	CCATGG	2 cut(s)	211, 1013
NdeI	CATATG	1 cut(s)	26
NlaIII	CATG	9 cut(s)	215, 233, 371, 677, 1017, 1022, 1165, 1194, 1780
NlaIV	GGNNCC	4 cut(s)	109, 528, 737, 1685
NmeAIII	GCCGAG	1 cut(s)	1367
NmuCI	GTSAC	6 cut(s)	1100, 1461, 1960, 2078, 2093, 2105
NsiI	ATGCAT	2 cut(s)	1324, 2030
NspI	RCATGY	2 cut(s)	371, 1165
NspV	TTCGAA	2 cut(s)	700, 2169
PaeR7I	CTCGAG	1 cut(s)	2193
PagI	TCATGA	1 cut(s)	1776
PciSI	GCTCTTC	2 cut(s)	118, 988
PctI	GAATGC	2 cut(s)	1648, 2030
PfeI	GAWTC	8 cut(s)	362, 394, 414, 859, 1249, 1369, 2015, 2041
PfoI	TCCNGGA	1 cut(s)	1314
PkrI	GCNGC	1 cut(s)	1231
PleI	GAGTC	4 cut(s)	276, 1720, 1868, 1957
PpsI	GAGTC	4 cut(s)	276, 1720, 1868, 1957
PshBI	ATTAAT	1 cut(s)	1431
Psp124BI	GAGCTC	3 cut(s)	558, 1759, 2149
Psp6I	CCWGG	5 cut(s)	388, 976, 1314, 2089, 2161
PspEI	GGTNACC	3 cut(s)	346, 2093, 2105
PspGI	CCWGG	5 cut(s)	388, 976, 1314, 2089, 2161
PspN4I	GGNNCC	4 cut(s)	109, 528, 737, 1685
PspPI	GGNCC	5 cut(s)	315, 1001, 1043, 1621, 1765
PspXI	VCTCGAGB	1 cut(s)	2193
PstNI	CAGNNNCTG	1 cut(s)	1742
PsuI	RGATCY	4 cut(s)	526, 838, 1832, 2065
PvuII	CAGCTG	1 cut(s)	1204
RsaI	GTAC	6 cut(s)	695, 1067, 1376, 1604, 1716, 2219
RsaNI	GTAC	6 cut(s)	694, 1066, 1375, 1603, 1715, 2218
RseI	CAYNNNNRTG	2 cut(s)	430, 1396
SacI	GAGCTC	3 cut(s)	558, 1759, 2149
SacII	CCGCGG	1 cut(s)	734
SapI	GCTCTTC	2 cut(s)	118, 988
SaqAI	TTAA	4 cut(s)	384, 648, 1431, 1983
SatI	GCNGC	1 cut(s)	1230
Sau96I	GGNCC	5 cut(s)	315, 1001, 1043, 1621, 1765
ScaI	AGTACT	2 cut(s)	695, 1376
SchI	GAGTC	4 cut(s)	276, 1720, 1868, 1957
ScrFI	CCNGG	8 cut(s)	390, 978, 1316, 1688, 1768, 2091, 2103, 2163
SduI	GDGCHC	6 cut(s)	58, 558, 1759, 1791, 1980, 2149
SfaNI	GCATC	7 cut(s)	253, 442, 1309, 1320, 1450, 2017, 2037
SfcI	CTRYAG	1 cut(s)	49
Sfr274I	CTCGAG	1 cut(s)	2193
Sfr303I	CCGCGG	1 cut(s)	734
SfuI	TTCGAA	2 cut(s)	700, 2169
SgrBI	CCGCGG	1 cut(s)	734
SinI	GGWCC	2 cut(s)	315, 1001
SlaI	CTCGAG	1 cut(s)	2193
SmiMI	CAYNNNNRTG	2 cut(s)	430, 1396
SmlI	CTYRAG	5 cut(s)	247, 575, 1130, 2074, 2193
SmoI	CTYRAG	5 cut(s)	247, 575, 1130, 2074, 2193
SsiI	CCGC	5 cut(s)	374, 731, 733, 999, 2051
SspMI	CTAG	6 cut(s)	188, 222, 602, 935, 1653, 2242
SstI	GAGCTC	3 cut(s)	558, 1759, 2149
StyD4I	CCNGG	8 cut(s)	388, 976, 1314, 1686, 1766, 2089, 2101, 2161
StyI	CCWWGG	6 cut(s)	211, 311, 1013, 1381, 1678, 2187
TaaI	ACNGT	8 cut(s)	53, 85, 808, 821, 1144, 1184, 1696, 2038
TaqI	TCGA	6 cut(s)	700, 986, 1218, 2116, 2169, 2194
TatI	WGTACW	4 cut(s)	693, 1065, 1374, 1602
TfiI	GAWTC	8 cut(s)	362, 394, 414, 859, 1249, 1369, 2015, 2041
Tru1I	TTAA	4 cut(s)	384, 648, 1431, 1983
Tru9I	TTAA	4 cut(s)	384, 648, 1431, 1983
TseFI	GTSAC	6 cut(s)	1100, 1461, 1960, 2078, 2093, 2105
TseI	GCWGC	1 cut(s)	1229
Tsp45I	GTSAC	6 cut(s)	1100, 1461, 1960, 2078, 2093, 2105
TspDTI	ATGAA	7 cut(s)	52, 207, 218, 704, 1345, 1765, 1830
VneI	GTGCAC	1 cut(s)	1787
VpaK11BI	GGWCC	2 cut(s)	315, 1001
VspI	ATTAAT	1 cut(s)	1431
XapI	RAATTY	3 cut(s)	225, 1171, 1351
XbaI	TCTAGA	1 cut(s)	221
XceI	RCATGY	2 cut(s)	371, 1165
XcmI	CCANNNNNNNNNTGG	2 cut(s)	432, 1011
XhoI	CTCGAG	1 cut(s)	2193
XmiI	GTMKAC	2 cut(s)	1509, 1540
XspI	CTAG	6 cut(s)	188, 222, 602, 935, 1653, 2242
ZrmI	AGTACT	2 cut(s)	695, 1376
Zsp2I	ATGCAT	2 cut(s)	1324, 2030

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.