Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0014668

Physical Location & Seq

Genomic Coordinates Forward (+)

7598155 .. 7600584

Gene Structure 2430 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g11260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGATCCAAACAATCCGAAATGGGGGGAAGAATTTCACATCTACTGTGCCCACAACATCTCACACATTATATTCACTGGCAAAGATGATCGATCTCATTGGGGCAACCCTAATTGGAAGAGCATATATACCAGTTGAGGAGATACTCAAGGGTTATGGGGCGAAAAGATGGTTTGAAATTTTGGATGAAGATCACAATCCCATCCATGGTAATTCTAGAATTCATGTCAAGTTACAATTTTCCAGTGTTGCAGCAGATTTTCACTGGTCACTTGGGATTAGAAACCCTGAGTATGAAGGTGTTCCTAGGACGTTTTTCAATCAAAGGCAGGGTTGTAGGGTTACTCTATACCAAGATTCGCACATTGCAGATGAATTTAATCCTCATATTCCTACGCCCCTAGGCGGATTATATGAGCCGCAAAGATGTTGGGAGGACGTCTTTGATGCAATCACTAATGCAAGGTGCTTTATTTACATAACTGGATGGTCTGTGTACACTAAAATAACCTTGTTAAGGGACCCAAGAAGGCGAAAAGATGACATTACACTAGGGCAGCTTCTTAAGAGGAAGGCTGATGAGGGCGTTTTGGTTCTTTTGCTTGTTTGGGATGATAGAACTTCTATTGAGGAGCTGAAGAAGGATGGTTTGATGACAACTCATGATCAAGAAACCGAAGAATATTTTCGAAACACAAAAGTGCATTGCTTCTTATGCCCTCGGAACCCTGATGTAGGGAAAAGCATTATTCAGGGTTTTCAGACTGCCACAATGTTTACTCACCATCAAAAAACGATTGTGGTGGACAGTGAGATATCAGGCAGAGGATCACAAAAGAGGAGGATTGTGAGCTTTGTCGGAGGTATTGATCTTTGTGATGGAAGATATGATACTCAAGAACATCCCTTGTTTGCAACCCTGGGTACAACCCACCAGAATGATTTCCATCAGCCCAACTTTGCAGGCTCTTCAATTAGGAAAGGTGGTCCAAGGGAGCCCTGGCATGACATTCATTGTAAACTGGAAGGGCCGGTTGCTTGGGATGTCTTATACAACTTTGAGCAGAGGTGGAAAAAACAGGTTGGAGAGAAGTTTTTAATTCCAATAGGCAAACTTGAAGAAATCACAGTTCACCCTTTACAAGATGTGTTTTCAAATGACGACGAATCATGGAACGTTCAACTATTCAGGTCCATTGACAATGGGGCTGCTTTTGGCTTTCCTGAAAAGCCTCTTGAAGCAACACAAATAGGACTTGTGAGTGGGAAGAATAACATCATCGACCGAAGCATTCAAGACGCGTATATCCATGCCATCCGGCGAGCCAAAAACTTCATTTACATTGAGAATCAGTATTTTCTTGGAAGTTCATTTGGATGGAGATCAAAAGACATTAGAGATGAGGATATCAATGCTTTACACCTTATACCGAAGGAGCTTTCGCTGAAGATTGTTAGCAAAATTGAAGTCGGAGAGAGGTTCAGCGTCTACATTGTTGTCCCAATGTGGCCAGAAGGTATGCCTGAGAGTGCTTCTGTTCAGGCTATATTGGATTGGCAAAGAAGGACAATGGAGATGATGTACACTGATATCTCAGAAGCCCTTCAGAAAAAGGGCTCAAATGCAAACCCTAAGGATTATCTCACATTCTTCTGCCTCGGCAACCGGGAGTTGGAGATGGATGGAGAATATAAACCTCCCGAGACTCCAGAGCCAGACACCGATTACAAAAGAGCTCAAAAGGCCCGGCGTTTCATGATTTACGTGCATTCAAAAATGATGATAGTTGATGATGAATACATAATCATTGGATCTGCCAACATAAACCAAAGGTCAATGGATGGGGCAAGGGACTCTGAGATTGCTATAGGAGCATTCCAACCTAAACATTTAGCTTCGACAATCCCAGCCAGGGGCCAGATCTATGCTTTCAGGCTAGCACTATGGTATGAGCACCTCAAAGTGGTTGACAACTCCTTCTTGCATCCAGAATCCTTGGAATGCATCCGAAGAGTGAACCAGATTGCCGAAAGGAACTGGGAATTTTACTCGAGCGACACGATTTATGACATTCCAGGTCACCTTCTCCACTACCCCATTGTGGTAAGCAATAATGGAGCTCTAACAACACTGCCTGGCTTCGAATATTTTCCCGATACCAAGGCTCGTGTTTTCGGCACCAAATCTGACTACCTTCCTCCAATCCTCACCACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004620 GO:0004630 GO:0006629 GO:0006643 GO:0006950 GO:0006970 GO:0007275 GO:0008081 GO:0008150 GO:0008152 GO:0008610 GO:0009056 GO:0009058 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010035 GO:0016042 GO:0016298 GO:0016787 GO:0016788 GO:0022622 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0042578 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0046466 GO:0048364 GO:0048731 GO:0048856 GO:0050896 GO:0071704 GO:0097305 GO:0099402 GO:1901575 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 ko01110 ko04014 ko04024 ko04071 ko04072 ko04144 ko04666 ko04724 ko04912 ko05231 map00564 map00565 map01100 map01110 map04014 map04024 map04071 map04072 map04144 map04666 map04724 map04912 map05231

Pfam Domains

Protein Families

C2 PLD_C PLDc

Protein Analysis

739

Amino Acids

84.73

Weight (kDa)

6.17

Isoelectric Point (pI)

40.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PLDc	PF00614	587 - 612	3.1e-08	Phospholipase D Active site motif
PLDc_2	PF13091	587 - 621	2.3e-06	PLD-like domain
PLD_C	PF12357	657 - 728	6.9e-29	Phospholipase D C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014668)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g29120
malus_domestica	MD15G1125000.v1.1
prunus_persica	Prupe.1G480500_v2.0.a1 Prupe.1G480500_v2.0.a1
pyrus_communis	pycom15g11260
rosa_chinensis	RchiOBHm_Chr6g0298001
rosa_laevigata	RLG00000011544
rosa_multiflora	Rmu_sc0002800.1_g000023
rosa_roxburghii	Rroxscaffold_7G00170010 Rroxscaffold_7G00178840
rosa_rugosa	Rorug06G0277800 Rorug06G0277900
rosa_samantha	Rh6AG388200 Rh6BG396400 Rh6CG402400 Rh6DG388600
rosa_wichuraiana	Rw6G033880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	441
AccB1I	GGYRCC	1 cut(s)	2177
AccI	GTMKAC	1 cut(s)	1488
AccII	CGCG	1 cut(s)	1301
AciI	CCGC	2 cut(s)	405, 419
AclI	AACGTT	1 cut(s)	1176
AclWI	GGATC	2 cut(s)	835, 1819
AcoI	YGGCCR	1 cut(s)	1508
AcsI	RAATTY	5 cut(s)	31, 177, 219, 374, 2042
AcuI	CTGAAG	3 cut(s)	656, 1466, 1589
AcyI	GRCGYC	1 cut(s)	438
AfaI	GTAC	3 cut(s)	497, 925, 1583
AflII	CTTAAG	1 cut(s)	563
AflIII	ACRYGT	1 cut(s)	1299
AjnI	CCWGG	5 cut(s)	918, 998, 1910, 2074, 2134
AleI	CACNNNNGTG	1 cut(s)	698
AluBI	AGCT	7 cut(s)	559, 634, 852, 1438, 1736, 1895, 2120
AluI	AGCT	7 cut(s)	559, 634, 852, 1438, 1736, 1895, 2120
Alw21I	GWGCWC	3 cut(s)	1738, 1956, 2122
Alw26I	GTCTC	1 cut(s)	1697
AlwI	GGATC	2 cut(s)	835, 1819
Ama87I	CYCGRG	2 cut(s)	1700, 2050
AoxI	GGCC	4 cut(s)	1028, 1508, 1743, 1915
ApeKI	GCWGC	3 cut(s)	251, 556, 1208
ApoI	RAATTY	5 cut(s)	31, 177, 219, 374, 2042
ArsI	GACNNNNNNTTYG	2 cut(s)	1452, 1484
Asp700I	GAANNNNTTC	6 cut(s)	32, 300, 684, 941, 1602, 2148
AspA2I	CCTAGG	2 cut(s)	305, 400
AspS9I	GGNCC	6 cut(s)	520, 986, 1028, 1191, 1744, 1915
AsuC2I	CCSGG	2 cut(s)	1667, 1747
AsuHPI	GGTGA	4 cut(s)	773, 1124, 2072, 2200
AsuII	TTCGAA	2 cut(s)	688, 2142
AsuNHI	GCTAGC	1 cut(s)	1936
AvaI	CYCGRG	2 cut(s)	1700, 2050
AvaII	GGWCC	3 cut(s)	520, 986, 1191
AvrII	CCTAGG	2 cut(s)	305, 400
AxyI	CCTNAGG	1 cut(s)	1632
BaeGI	GKGCMC	1 cut(s)	51
BalI	TGGCCA	1 cut(s)	1510
BanI	GGYRCC	1 cut(s)	2177
BanII	GRGCYC	4 cut(s)	999, 1619, 1738, 2122
BarI	GAAGNNNNNNTAC	2 cut(s)	874, 906
BauI	CACGAG	1 cut(s)	2166
Bbv12I	GWGCWC	3 cut(s)	1738, 1956, 2122
BbvI	GCAGC	3 cut(s)	263, 568, 1195
BciT130I	CCWGG	5 cut(s)	920, 1000, 1912, 2076, 2136
BclI	TGATCA	1 cut(s)	664
BcnI	CCSGG	2 cut(s)	1667, 1747
BcoDI	GTCTC	1 cut(s)	1697
BfaI	CTAG	5 cut(s)	216, 306, 401, 551, 1937
BfmI	CTRYAG	1 cut(s)	1866
BfrI	CTTAAG	1 cut(s)	563
BglII	AGATCT	1 cut(s)	1920
BisI	GCNGC	4 cut(s)	252, 419, 557, 1209
BlnI	CCTAGG	2 cut(s)	305, 400
BlsI	GCNGC	4 cut(s)	253, 420, 558, 1210
Bme1390I	CCNGG	7 cut(s)	920, 1000, 1667, 1747, 1912, 2076, 2136
Bme18I	GGWCC	3 cut(s)	520, 986, 1191
BmeT110I	CYCGRG	2 cut(s)	1700, 2050
BmgT120I	GGNCC	6 cut(s)	520, 986, 1028, 1191, 1744, 1915
BmiI	GGNNCC	6 cut(s)	521, 522, 725, 996, 1916, 2179
BmrFI	CCNGG	7 cut(s)	920, 1000, 1667, 1747, 1912, 2076, 2136
BmrI	ACTGGG	1 cut(s)	2047
BmsI	GCATC	3 cut(s)	436, 1993, 2013
BmtI	GCTAGC	1 cut(s)	1940
BmuI	ACTGGG	1 cut(s)	2047
BpmI	CTGGAG	1 cut(s)	1692
Bpu14I	TTCGAA	2 cut(s)	688, 2142
BpuEI	CTTGAG	2 cut(s)	131, 879
BpuMI	CCSGG	2 cut(s)	1667, 1747
Bsa29I	ATCGAT	1 cut(s)	90
BsaAI	YACGTR	1 cut(s)	1765
BsaBI	GATNNNNATC	4 cut(s)	189, 195, 945, 1381
BsaHI	GRCGYC	1 cut(s)	438
BsaXI	ACNNNNNCTCC	2 cut(s)	1565, 1595
Bse118I	RCCGGY	1 cut(s)	1030
Bse1I	ACTGG	7 cut(s)	81, 131, 243, 269, 487, 1026, 2042
Bse21I	CCTNAGG	1 cut(s)	1632
Bse3DI	GCAATG	2 cut(s)	363, 703
Bse8I	GATNNNNATC	4 cut(s)	189, 195, 945, 1381
BseBI	CCWGG	5 cut(s)	920, 1000, 1912, 2076, 2136
BseCI	ATCGAT	1 cut(s)	90
BseJI	GATNNNNATC	4 cut(s)	189, 195, 945, 1381
BseMI	GCAATG	2 cut(s)	363, 703
BseMII	CTCAG	4 cut(s)	279, 1515, 1608, 1848
BseNI	ACTGG	7 cut(s)	81, 131, 243, 269, 487, 1026, 2042
BseRI	GAGGAG	3 cut(s)	152, 644, 853
BseSI	GKGCMC	1 cut(s)	51
BseXI	GCAGC	3 cut(s)	263, 568, 1195
BseYI	CCCAGC	1 cut(s)	1906
Bsh1236I	CGCG	1 cut(s)	1301
Bsh1285I	CGRYCG	1 cut(s)	1285
BshFI	GGCC	4 cut(s)	1030, 1510, 1745, 1917
BshNI	GGYRCC	1 cut(s)	2177
BshVI	ATCGAT	1 cut(s)	90
BsiEI	CGRYCG	1 cut(s)	1285
BsiHKAI	GWGCWC	3 cut(s)	1738, 1956, 2122
BsiHKCI	CYCGRG	2 cut(s)	1700, 2050
BsiSI	CCGG	4 cut(s)	1031, 1318, 1666, 1747
BslFI	GGGAC	3 cut(s)	533, 1484, 1865
BsmAI	GTCTC	1 cut(s)	1697
BsmFI	GGGAC	3 cut(s)	533, 1484, 1865
BsmI	GAATGC	4 cut(s)	1290, 1768, 1874, 2006
BsnI	GGCC	4 cut(s)	1030, 1510, 1745, 1917
BsoBI	CYCGRG	2 cut(s)	1700, 2050
Bsp119I	TTCGAA	2 cut(s)	688, 2142
Bsp1286I	GDGCHC	6 cut(s)	51, 999, 1619, 1738, 1956, 2122
Bsp1407I	TGTACA	2 cut(s)	495, 1581
Bsp19I	CCATGG	1 cut(s)	205
BspACI	CCGC	2 cut(s)	405, 419
BspANI	GGCC	4 cut(s)	1030, 1510, 1745, 1917
BspCNI	CTCAG	4 cut(s)	280, 1516, 1607, 1849
BspDI	ATCGAT	1 cut(s)	90
BspFNI	CGCG	1 cut(s)	1301
BspHI	TCATGA	2 cut(s)	661, 1755
BspLI	GGNNCC	6 cut(s)	521, 522, 725, 996, 1916, 2179
BspOI	GCTAGC	1 cut(s)	1940
BspPI	GGATC	2 cut(s)	835, 1819
BspQI	GCTCTTC	2 cut(s)	112, 973
BspT104I	TTCGAA	2 cut(s)	688, 2142
BspT107I	GGYRCC	1 cut(s)	2177
BspTI	CTTAAG	1 cut(s)	563
BsrDI	GCAATG	2 cut(s)	363, 703
BsrFI	RCCGGY	1 cut(s)	1030
BsrGI	TGTACA	2 cut(s)	495, 1581
BsrI	ACTGG	7 cut(s)	81, 131, 243, 269, 487, 1026, 2042
BssAI	RCCGGY	1 cut(s)	1030
BssNI	GRCGYC	1 cut(s)	438
BssSI	CACGAG	1 cut(s)	2166
BssT1I	CCWWGG	6 cut(s)	205, 305, 400, 989, 1995, 2160
Bst2BI	CACGAG	1 cut(s)	2166
Bst2UI	CCWGG	5 cut(s)	920, 1000, 1912, 2076, 2136
Bst4CI	ACNGT	3 cut(s)	46, 809, 1129
Bst6I	CTCTTC	3 cut(s)	112, 973, 2005
BstACI	GRCGYC	1 cut(s)	438
BstAFI	CTTAAG	1 cut(s)	563
BstAUI	TGTACA	2 cut(s)	495, 1581
BstBAI	YACGTR	1 cut(s)	1765
BstBI	TTCGAA	2 cut(s)	688, 2142
BstC8I	GCNNGC	3 cut(s)	964, 1323, 1938
BstDEI	CTNAG	6 cut(s)	288, 1524, 1594, 1632, 1857, 2214
BstDSI	CCRYGG	1 cut(s)	205
BstEII	GGTNACC	1 cut(s)	2078
BstENI	CCTNNNNNAGG	2 cut(s)	514, 732
BstFNI	CGCG	1 cut(s)	1301
BstMAI	GTCTC	1 cut(s)	1697
BstMCI	CGRYCG	1 cut(s)	1285
BstMWI	GCNNNNNNNGC	3 cut(s)	714, 1742, 1871
BstNI	CCWGG	5 cut(s)	920, 1000, 1912, 2076, 2136
BstPI	GGTNACC	1 cut(s)	2078
BstSCI	CCNGG	7 cut(s)	918, 998, 1665, 1745, 1910, 2074, 2134
BstSFI	CTRYAG	1 cut(s)	1866
BstSLI	GKGCMC	1 cut(s)	51
BstUI	CGCG	1 cut(s)	1301
BstV1I	GCAGC	3 cut(s)	263, 568, 1195
BstX2I	RGATCY	2 cut(s)	1811, 1920
BstYI	RGATCY	2 cut(s)	1811, 1920
Bsu15I	ATCGAT	1 cut(s)	90
Bsu36I	CCTNAGG	1 cut(s)	1632
BsuRI	GGCC	4 cut(s)	1030, 1510, 1745, 1917
BsuTUI	ATCGAT	1 cut(s)	90
BtgI	CCRYGG	1 cut(s)	205
BtsI	GCAGTG	1 cut(s)	2129
BtsIMutI	CAGTG	6 cut(s)	74, 250, 262, 814, 1584, 2129
Cac8I	GCNNGC	3 cut(s)	964, 1323, 1938
CciI	TCATGA	2 cut(s)	661, 1755
Cfr10I	RCCGGY	1 cut(s)	1030
Cfr13I	GGNCC	6 cut(s)	520, 986, 1028, 1191, 1744, 1915
ClaI	ATCGAT	1 cut(s)	90
CseI	GACGC	2 cut(s)	1307, 1474
Csp6I	GTAC	3 cut(s)	496, 924, 1582
CviAII	CATG	7 cut(s)	206, 224, 662, 1004, 1170, 1310, 1756
CviQI	GTAC	3 cut(s)	496, 924, 1582
DdeI	CTNAG	6 cut(s)	288, 1524, 1594, 1632, 1857, 2214
EaeI	YGGCCR	1 cut(s)	1508
Eam1104I	CTCTTC	3 cut(s)	112, 973, 2005
EarI	CTCTTC	3 cut(s)	112, 973, 2005
EciI	GGCGGA	1 cut(s)	420
Ecl136II	GAGCTC	2 cut(s)	1736, 2120
Eco130I	CCWWGG	6 cut(s)	205, 305, 400, 989, 1995, 2160
Eco24I	GRGCYC	4 cut(s)	999, 1619, 1738, 2122
Eco32I	GATATC	3 cut(s)	816, 1408, 1591
Eco47I	GGWCC	3 cut(s)	520, 986, 1191
Eco53kI	GAGCTC	2 cut(s)	1736, 2120
Eco57I	CTGAAG	3 cut(s)	656, 1466, 1589
Eco81I	CCTNAGG	1 cut(s)	1632
Eco88I	CYCGRG	2 cut(s)	1700, 2050
Eco91I	GGTNACC	1 cut(s)	2078
EcoICRI	GAGCTC	2 cut(s)	1736, 2120
EcoNI	CCTNNNNNAGG	2 cut(s)	514, 732
EcoO109I	RGGNCCY	1 cut(s)	520
EcoO65I	GGTNACC	1 cut(s)	2078
EcoRI	GAATTC	1 cut(s)	219
EcoRII	CCWGG	5 cut(s)	918, 998, 1910, 2074, 2134
EcoRV	GATATC	3 cut(s)	816, 1408, 1591
EcoT14I	CCWWGG	6 cut(s)	205, 305, 400, 989, 1995, 2160
EcoT22I	ATGCAT	1 cut(s)	2006
EcoT38I	GRGCYC	4 cut(s)	999, 1619, 1738, 2122
ErhI	CCWWGG	6 cut(s)	205, 305, 400, 989, 1995, 2160
FaeI	CATG	7 cut(s)	209, 227, 665, 1007, 1173, 1313, 1759
FaqI	GGGAC	3 cut(s)	533, 1484, 1865
FatI	CATG	7 cut(s)	205, 223, 661, 1003, 1169, 1309, 1755
FbaI	TGATCA	1 cut(s)	664
FblI	GTMKAC	1 cut(s)	1488
Fnu4HI	GCNGC	4 cut(s)	252, 419, 557, 1209
FriOI	GRGCYC	4 cut(s)	999, 1619, 1738, 2122
Fsp4HI	GCNGC	4 cut(s)	252, 419, 557, 1209
FspBI	CTAG	5 cut(s)	216, 306, 401, 551, 1937
GluI	GCNGC	4 cut(s)	252, 419, 557, 1209
GsaI	CCCAGC	1 cut(s)	1910
GsuI	CTGGAG	1 cut(s)	1692
HaeIII	GGCC	4 cut(s)	1030, 1510, 1745, 1917
HapII	CCGG	4 cut(s)	1031, 1318, 1666, 1747
HgaI	GACGC	2 cut(s)	1307, 1474
Hin1I	GRCGYC	1 cut(s)	438
Hin1II	CATG	7 cut(s)	209, 227, 665, 1007, 1173, 1313, 1759
HincII	GTYRAC	1 cut(s)	1969
HindII	GTYRAC	1 cut(s)	1969
HinfI	GANTC	6 cut(s)	356, 1166, 1348, 1705, 1853, 1991
HpaII	CCGG	4 cut(s)	1031, 1318, 1666, 1747
HphI	GGTGA	4 cut(s)	773, 1124, 2072, 2200
Hpy99I	CGWCG	1 cut(s)	1166
HpyCH4III	ACNGT	3 cut(s)	46, 809, 1129
HpyCH4IV	ACGT	4 cut(s)	311, 438, 1176, 1764
HpyF10VI	GCNNNNNNNGC	3 cut(s)	714, 1742, 1871
HpyF3I	CTNAG	6 cut(s)	288, 1524, 1594, 1632, 1857, 2214
HpySE526I	ACGT	4 cut(s)	311, 438, 1176, 1764
Hsp92I	GRCGYC	1 cut(s)	438
Hsp92II	CATG	7 cut(s)	209, 227, 665, 1007, 1173, 1313, 1759
KflI	GGGWCCC	1 cut(s)	520
Ksp22I	TGATCA	1 cut(s)	664
LguI	GCTCTTC	2 cut(s)	112, 973
LmnI	GCTCC	5 cut(s)	631, 994, 1435, 1871, 2117
Lsp1109I	GCAGC	3 cut(s)	263, 568, 1195
LweI	GCATC	3 cut(s)	436, 1993, 2013
MaeI	CTAG	5 cut(s)	216, 306, 401, 551, 1937
MaeII	ACGT	4 cut(s)	311, 438, 1176, 1764
MaeIII	GTNAC	4 cut(s)	231, 267, 340, 2078
MflI	RGATCY	2 cut(s)	1811, 1920
MhlI	GDGCHC	6 cut(s)	51, 999, 1619, 1738, 1956, 2122
MlsI	TGGCCA	1 cut(s)	1510
MluI	ACGCGT	1 cut(s)	1299
MluNI	TGGCCA	1 cut(s)	1510
MlyI	GAGTC	2 cut(s)	1699, 1847
MmeI	TCCRAC	5 cut(s)	838, 1063, 1450, 1653, 1903
Mox20I	TGGCCA	1 cut(s)	1510
Mph1103I	ATGCAT	1 cut(s)	2006
MroXI	GAANNNNTTC	6 cut(s)	32, 300, 684, 941, 1602, 2148
MscI	TGGCCA	1 cut(s)	1510
MseI	TTAA	4 cut(s)	378, 515, 564, 1097
MslI	CAYNNNNRTG	3 cut(s)	698, 936, 1375
Msp20I	TGGCCA	1 cut(s)	1510
MspCI	CTTAAG	1 cut(s)	563
MspI	CCGG	4 cut(s)	1031, 1318, 1666, 1747
MspR9I	CCNGG	7 cut(s)	920, 1000, 1667, 1747, 1912, 2076, 2136
Mva1269I	GAATGC	4 cut(s)	1290, 1768, 1874, 2006
MvaI	CCWGG	5 cut(s)	920, 1000, 1912, 2076, 2136
MvnI	CGCG	1 cut(s)	1301
MwoI	GCNNNNNNNGC	3 cut(s)	714, 1742, 1871
NciI	CCSGG	2 cut(s)	1667, 1747
NcoI	CCATGG	1 cut(s)	205
NheI	GCTAGC	1 cut(s)	1936
NlaIII	CATG	7 cut(s)	209, 227, 665, 1007, 1173, 1313, 1759
NlaIV	GGNNCC	6 cut(s)	521, 522, 725, 996, 1916, 2179
NmeAIII	GCCGAG	1 cut(s)	1638
NmuCI	GTSAC	2 cut(s)	267, 2078
NsiI	ATGCAT	1 cut(s)	2006
NspV	TTCGAA	2 cut(s)	688, 2142
OliI	CACNNNNGTG	1 cut(s)	698
PaeR7I	CTCGAG	1 cut(s)	2050
PagI	TCATGA	2 cut(s)	661, 1755
PasI	CCCWGGG	1 cut(s)	919
PciSI	GCTCTTC	2 cut(s)	112, 973
PcsI	WCGNNNNNNNCGW	1 cut(s)	2057
PctI	GAATGC	4 cut(s)	1290, 1768, 1874, 2006
PdmI	GAANNNNTTC	6 cut(s)	32, 300, 684, 941, 1602, 2148
PfeI	GAWTC	4 cut(s)	356, 1166, 1348, 1991
PkrI	GCNGC	4 cut(s)	253, 420, 558, 1210
PleI	GAGTC	2 cut(s)	1699, 1847
PpsI	GAGTC	2 cut(s)	1699, 1847
Ppu21I	YACGTR	1 cut(s)	1765
PpuMI	RGGWCCY	1 cut(s)	520
Psp124BI	GAGCTC	2 cut(s)	1738, 2122
Psp1406I	AACGTT	1 cut(s)	1176
Psp5II	RGGWCCY	1 cut(s)	520
Psp6I	CCWGG	5 cut(s)	918, 998, 1910, 2074, 2134
PspEI	GGTNACC	1 cut(s)	2078
PspFI	CCCAGC	1 cut(s)	1906
PspGI	CCWGG	5 cut(s)	918, 998, 1910, 2074, 2134
PspN4I	GGNNCC	6 cut(s)	521, 522, 725, 996, 1916, 2179
PspPI	GGNCC	6 cut(s)	520, 986, 1028, 1191, 1744, 1915
PspPPI	RGGWCCY	1 cut(s)	520
PspXI	VCTCGAGB	1 cut(s)	2050
PsuI	RGATCY	2 cut(s)	1811, 1920
RsaI	GTAC	3 cut(s)	497, 925, 1583
RsaNI	GTAC	3 cut(s)	496, 924, 1582
RseI	CAYNNNNRTG	3 cut(s)	698, 936, 1375
SacI	GAGCTC	2 cut(s)	1738, 2122
SapI	GCTCTTC	2 cut(s)	112, 973
SaqAI	TTAA	4 cut(s)	378, 515, 564, 1097
SatI	GCNGC	4 cut(s)	252, 419, 557, 1209
Sau96I	GGNCC	6 cut(s)	520, 986, 1028, 1191, 1744, 1915
SchI	GAGTC	2 cut(s)	1699, 1847
ScrFI	CCNGG	7 cut(s)	920, 1000, 1667, 1747, 1912, 2076, 2136
SduI	GDGCHC	6 cut(s)	51, 999, 1619, 1738, 1956, 2122
SfaNI	GCATC	3 cut(s)	436, 1993, 2013
SfcI	CTRYAG	1 cut(s)	1866
Sfr274I	CTCGAG	1 cut(s)	2050
SfuI	TTCGAA	2 cut(s)	688, 2142
SinI	GGWCC	3 cut(s)	520, 986, 1191
SlaI	CTCGAG	1 cut(s)	2050
SmiMI	CAYNNNNRTG	3 cut(s)	698, 936, 1375
SmlI	CTYRAG	4 cut(s)	146, 563, 894, 2050
SmoI	CTYRAG	4 cut(s)	146, 563, 894, 2050
SsiI	CCGC	2 cut(s)	405, 419
SspI	AATATT	2 cut(s)	683, 2147
SspMI	CTAG	5 cut(s)	216, 306, 401, 551, 1937
SstI	GAGCTC	2 cut(s)	1738, 2122
StyD4I	CCNGG	7 cut(s)	918, 998, 1665, 1745, 1910, 2074, 2134
StyI	CCWWGG	6 cut(s)	205, 305, 400, 989, 1995, 2160
TaaI	ACNGT	3 cut(s)	46, 809, 1129
TaiI	ACGT	4 cut(s)	314, 441, 1179, 1767
TaqI	TCGA	6 cut(s)	90, 688, 1281, 1898, 2051, 2142
TaqII	GACCGA	1 cut(s)	1299
TatI	WGTACW	2 cut(s)	495, 1581
TauI	GCSGC	1 cut(s)	421
TfiI	GAWTC	4 cut(s)	356, 1166, 1348, 1991
Tru1I	TTAA	4 cut(s)	378, 515, 564, 1097
Tru9I	TTAA	4 cut(s)	378, 515, 564, 1097
TscAI	CASTG	6 cut(s)	81, 250, 269, 814, 1591, 2136
TseFI	GTSAC	2 cut(s)	267, 2078
TseI	GCWGC	3 cut(s)	251, 556, 1208
Tsp45I	GTSAC	2 cut(s)	267, 2078
TspDTI	ATGAA	9 cut(s)	201, 212, 309, 387, 1001, 1324, 1359, 1744, 1809
TspRI	CASTG	6 cut(s)	81, 250, 269, 814, 1591, 2136
Vha464I	CTTAAG	1 cut(s)	563
VpaK11BI	GGWCC	3 cut(s)	520, 986, 1191
XagI	CCTNNNNNAGG	2 cut(s)	514, 732
XapI	RAATTY	5 cut(s)	31, 177, 219, 374, 2042
XbaI	TCTAGA	1 cut(s)	215
XcmI	CCANNNNNNNNNTGG	1 cut(s)	996
XhoI	CTCGAG	1 cut(s)	2050
XmaJI	CCTAGG	2 cut(s)	305, 400
XmiI	GTMKAC	1 cut(s)	1488
XmnI	GAANNNNTTC	6 cut(s)	32, 300, 684, 941, 1602, 2148
XspI	CTAG	5 cut(s)	216, 306, 401, 551, 1937
ZraI	GACGTC	1 cut(s)	439
Zsp2I	ATGCAT	1 cut(s)	2006

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.