Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0016204

Physical Location & Seq

Genomic Coordinates Reverse (-)

23294067 .. 23297639

Gene Structure 3573 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g30070.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGCTCTCACAGAAACCCCGCCATTTTCTCTCTCTGGCTCTCATCTTCTTCAAGCCAAACCCTAACCCTAACCCTAACCCTACCCTTCTTCTTCTACGATCCCTCTCCGAACAGTCATGGCTTTCCGTACCTGGCAACCCCCTTATCAAGTGGCCCTCGCTCTCGCCGCCGCCGTCACCGCCTCCCACTCTCCCTCCCCCAAACCCTAACCCTAATTTCGACCCCAAATTTTCAGAAAATGACTTCTCCACAATCACTAAGCTCCTCACCGACCCAAGCATCTTTCCCGGTGCTTCGCTTCGGAGCGCATTGGACCGGGTCGGAATCGACCCGAGTCCGAGTCTGGTACAGGCTGTGTTCGACCACTTCGATTCGTCTCCGAAATTGCTGCACACGCTGTTTGTTTGGGCTGAGGAGCAGCCGGGGTTTCGGTGCTCAGTGAAGCTCTTCACCTCAGTGATCAATGTGCTTGCCAAGGCTAGGGAGTTTGAGTCTGCGTGGTCTATGATTCTGGATCGAATCGGCGGAGATAAGGAGGCTGGGTTGGTCTCTGTTGATGCGTTCGTGATCATGATCAGACGGTATGCTCGTGCAGGTCAACCGCAATCAGCAATTCGAGCTTTTGAATTTGCGACTAACTTAGACTCATTTCTGAGTTCTGAATCAGAAATGAGTTTGTTTGAAATCTTACTGGATTCCCTTTGTAAGGAAGGTCTTGTGAGGGTGGCTACAGAGTATTTTGATGGGAAAAGGAAGTCGCATCGAGATTGGATTCCATCTGTTCGGGTTTATAATATACTGTTGAATGGGTGGTTTCGATCGAGGAAGCTGAAGAAGGCAGAGCGGCTTTGGGTGGAGATGAAGAGTGACGGTGTGAAACCTAGTGTTGTGACGTATGGTACACTTGTAGAAGGATATTGTCGGATGCGTCGTCCTGAAATTGCAATGGAGTTGGTGGGTGAGATGAGAAGGGAAGGAGTTGAGCCGAATGCAATTGTGTTCAATCCAATAATTGATGCTTTGGGGGAAGCTGGGAGGTTCAAGGAGGCATGGGGTATGATGGAGCGGTTTTCGGTTCTGGAATCAGGCCCCACTATTTCAACGTATAATTCTCTGGTAAAGGGCTACTGCAAGGCTGGAAATCTTGTAGAGGCTAGTAGGATTCTTAAGATGATGATAAGCAGGGGTATTGTACCAACTCCAGCAACCTATAACTATTTCTTTAGGTACTTTTCAAAGTCTGGGAAAATTGAGGAAGGAATGAACCTCTATACCAAAATGATTGAATCTGGGTATACCCCAGATCGTCTTACTTTCCATCTTTTGTTGAAGATGTTATGTGAAGAGGGAAGATTGGATTTGGCTGTTCAAGTTAGCAAGGAAATGAGAACTAGGGGATGCGATATGGATCTAGCTACGAGTACCATGTTGATTCATTTGCTCTGCAAGATGAATAAATTCAAAGAAGCTTTGTCAGAGTTTGAGGACATGATACGCAAGGGTTTAGTTCCGCAGTATCTAACTTTCCAGAACATGAATGATGAACTAAGGAAACAAGGGATGACTGAAATGGCACGAAAGCTGTGCGCCCTGATGTCTTCTGTTCCTCATTCTACAAAGTTGCCAAATACATATGTCAAAGATAGAGATGAATCTCATGAAAGGAGAAAATCTATAATTAAGAAGGCTGAAGCAATGTCTAAGGTGTTGAAAACTTGTTCAGATCCAAGAGAACTCGTCAAGCATAGAAGTTCGCCGGAGAGTGTTGAATCAAGAGCAAACCGGTTAATAGAGGATATCAAGACAAAAGCTAACATCAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009787 GO:0009788 GO:0009791 GO:0009845 GO:0009966 GO:0009968 GO:0009987 GO:0010029 GO:0010646 GO:0010648 GO:0016070 GO:0016787 GO:0016788 GO:0023051 GO:0023057 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0065007 GO:0071704 GO:0090304 GO:0090305 GO:0090351 GO:0097159 GO:1900140 GO:1901360 GO:1901363 GO:1901419 GO:1901420 GO:1905957 GO:1905958 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

608

Amino Acids

68.85

Weight (kDa)

9.23

Isoelectric Point (pI)

45.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	259 - 308	7.4e-15	PPR repeat family
PPR_3	PF13812	259 - 302	1.5e-06	Pentatricopeptide repeat domain
PPR_long	PF17177	277 - 381	4.8e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	283 - 343	3.5e-13	Pentatricopeptide repeat domain
PPR_1	PF12854	290 - 323	9.4e-10	PPR repeat
PPR_2	PF13041	294 - 341	7.7e-11	PPR repeat family
PPR	PF01535	297 - 327	8.7e-07	PPR repeat
PPR_2	PF13041	364 - 408	1.8e-10	PPR repeat family
PPR_1	PF12854	364 - 392	7.5e-09	PPR repeat
PPR_3	PF13812	366 - 409	2.7e-06	Pentatricopeptide repeat domain
PPR	PF01535	367 - 397	1.4e-08	PPR repeat
PPR_2	PF13041	401 - 447	3.1e-09	PPR repeat family
PPR_2	PF13041	439 - 483	5.7e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0016204)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11310
fragaria_vesca	FvH4_2g30070
malus_domestica	MD08G1137400.v1.1
prunus_persica	Prupe.1G467400_v2.0.a1
pyrus_communis	pycom08g11630
rosa_chinensis	RchiOBHm_Chr6g0312841
rosa_laevigata	RLG00000010293
rosa_multiflora	Rmu_sc0008049.1_g000008
rosa_roxburghii	Rroxscaffold_7G00156440
rosa_rugosa	Rorug06G0399900
rosa_samantha	Rh6AG517200 Rh6BG528600 Rh6CG533300 Rh6DG519800
rosa_wichuraiana	Rw6G044930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	792
Acc36I	ACCTGC	1 cut(s)	584
AccBSI	CCGCTC	2 cut(s)	844, 1066
AccI	GTMKAC	1 cut(s)	1295
AciI	CCGC	9 cut(s)	19, 167, 170, 179, 525, 602, 844, 1066, 1511
AclWI	GGATC	4 cut(s)	93, 522, 1416, 1718
AcsI	RAATTY	3 cut(s)	227, 626, 1457
AcuI	CTGAAG	2 cut(s)	851, 1710
AfaI	GTAC	6 cut(s)	129, 348, 901, 1194, 1229, 1423
AfiI	CCNNNNNNNGG	2 cut(s)	480, 706
AflII	CTTAAG	1 cut(s)	1166
AgeI	ACCGGT	1 cut(s)	1782
AjnI	CCWGG	1 cut(s)	130
AleI	CACNNNNGTG	1 cut(s)	455
AluBI	AGCT	9 cut(s)	262, 445, 620, 829, 1031, 1415, 1469, 1582, 1811
AluI	AGCT	9 cut(s)	262, 445, 620, 829, 1031, 1415, 1469, 1582, 1811
Alw21I	GWGCWC	1 cut(s)	437
Alw26I	GTCTC	2 cut(s)	381, 553
AlwI	GGATC	4 cut(s)	93, 522, 1416, 1718
Ama87I	CYCGRG	1 cut(s)	331
AoxI	GGCC	2 cut(s)	152, 1087
ApeKI	GCWGC	2 cut(s)	388, 418
ApoI	RAATTY	3 cut(s)	227, 626, 1457
AsiGI	ACCGGT	1 cut(s)	1782
Asp700I	GAANNNNTTC	2 cut(s)	446, 1457
AspLEI	GCGC	2 cut(s)	308, 1589
AspS9I	GGNCC	3 cut(s)	153, 313, 1088
AsuC2I	CCSGG	3 cut(s)	288, 317, 423
AsuHPI	GGTGA	4 cut(s)	168, 259, 442, 971
AvaI	CYCGRG	1 cut(s)	331
AvaII	GGWCC	1 cut(s)	313
BaeI	ACNNNNGTAYC	2 cut(s)	891, 924
BauI	CACGAG	1 cut(s)	588
BbsI	GAAGAC	1 cut(s)	1590
Bbv12I	GWGCWC	1 cut(s)	437
BbvCI	CCTCAGC	1 cut(s)	411
BbvI	GCAGC	2 cut(s)	375, 430
BccI	CCATC	4 cut(s)	737, 784, 1054, 1326
BceAI	ACGGC	1 cut(s)	157
BcgI	CGANNNNNNTGC	4 cut(s)	370, 404, 1566, 1600
BciT130I	CCWGG	1 cut(s)	132
BclI	TGATCA	3 cut(s)	459, 567, 573
BcnI	CCSGG	3 cut(s)	288, 317, 423
BcoDI	GTCTC	2 cut(s)	381, 553
BfaI	CTAG	5 cut(s)	480, 882, 1155, 1392, 1412
BfmI	CTRYAG	1 cut(s)	729
BfrI	CTTAAG	1 cut(s)	1166
BfuAI	ACCTGC	1 cut(s)	584
BisI	GCNGC	5 cut(s)	167, 170, 389, 419, 845
BlsI	GCNGC	5 cut(s)	168, 171, 390, 420, 846
Bme1390I	CCNGG	4 cut(s)	132, 288, 317, 423
Bme18I	GGWCC	1 cut(s)	313
BmeT110I	CYCGRG	1 cut(s)	331
BmgT120I	GGNCC	3 cut(s)	153, 313, 1088
BmiI	GGNNCC	1 cut(s)	1090
BmrFI	CCNGG	4 cut(s)	132, 288, 317, 423
BmsI	GCATC	6 cut(s)	288, 547, 769, 915, 1006, 1388
BoxI	GACNNNNGTC	1 cut(s)	333
BpiI	GAAGAC	1 cut(s)	1590
BpmI	CTGGAG	1 cut(s)	1185
Bpu10I	CCTNAGC	1 cut(s)	411
BpuMI	CCSGG	3 cut(s)	288, 317, 423
BsaBI	GATNNNNATC	2 cut(s)	572, 1407
BsaI	GGTCTC	1 cut(s)	553
BsaJI	CCNNGG	2 cut(s)	422, 474
BsaWI	WCCGGW	1 cut(s)	1782
BsaXI	ACNNNNNCTCC	6 cut(s)	178, 208, 476, 506, 527, 557
Bsc4I	CCNNNNNNNGG	2 cut(s)	480, 706
Bse118I	RCCGGY	1 cut(s)	1782
Bse1I	ACTGG	1 cut(s)	696
Bse3DI	GCAATG	2 cut(s)	951, 1701
Bse8I	GATNNNNATC	2 cut(s)	572, 1407
BseBI	CCWGG	1 cut(s)	132
BseDI	CCNNGG	2 cut(s)	422, 474
BseGI	GGATG	3 cut(s)	930, 1403, 1566
BseJI	GATNNNNATC	2 cut(s)	572, 1407
BseLI	CCNNNNNNNGG	2 cut(s)	480, 706
BseMI	GCAATG	2 cut(s)	951, 1701
BseMII	CTCAG	4 cut(s)	402, 450, 468, 644
BseNI	ACTGG	1 cut(s)	696
BseRI	GAGGAG	2 cut(s)	254, 428
BseXI	GCAGC	2 cut(s)	375, 430
BseYI	CCCAGC	2 cut(s)	539, 1031
BsgI	GTGCAG	2 cut(s)	374, 612
Bsh1285I	CGRYCG	1 cut(s)	821
BshFI	GGCC	2 cut(s)	154, 1089
BshTI	ACCGGT	1 cut(s)	1782
BsiEI	CGRYCG	1 cut(s)	821
BsiHKAI	GWGCWC	1 cut(s)	437
BsiHKCI	CYCGRG	1 cut(s)	331
BsiSI	CCGG	5 cut(s)	288, 316, 422, 1757, 1783
BslI	CCNNNNNNNGG	2 cut(s)	480, 706
BsmAI	GTCTC	2 cut(s)	381, 553
BsmBI	CGTCTC	1 cut(s)	381
BsmI	GAATGC	1 cut(s)	994
BsnI	GGCC	2 cut(s)	154, 1089
Bso31I	GGTCTC	1 cut(s)	553
BsoBI	CYCGRG	1 cut(s)	331
Bsp1286I	GDGCHC	1 cut(s)	437
Bsp143I	GATC	9 cut(s)	98, 459, 514, 567, 573, 818, 1303, 1408, 1723
BspACI	CCGC	9 cut(s)	19, 167, 170, 179, 525, 602, 844, 1066, 1511
BspANI	GGCC	2 cut(s)	154, 1089
BspCNI	CTCAG	4 cut(s)	403, 449, 467, 645
BspHI	TCATGA	2 cut(s)	570, 1657
BspLI	GGNNCC	1 cut(s)	1090
BspMI	ACCTGC	1 cut(s)	584
BspPI	GGATC	4 cut(s)	93, 522, 1416, 1718
BspQI	GCTCTTC	1 cut(s)	452
BspTI	CTTAAG	1 cut(s)	1166
BspTNI	GGTCTC	1 cut(s)	553
BsrBI	CCGCTC	2 cut(s)	844, 1066
BsrDI	GCAATG	2 cut(s)	951, 1701
BsrFI	RCCGGY	1 cut(s)	1782
BsrI	ACTGG	1 cut(s)	696
BssAI	RCCGGY	1 cut(s)	1782
BssECI	CCNNGG	2 cut(s)	422, 474
BssMI	GATC	9 cut(s)	98, 459, 514, 567, 573, 818, 1303, 1408, 1723
BssNAI	GTATAC	1 cut(s)	1296
BssSI	CACGAG	1 cut(s)	588
BssT1I	CCWWGG	1 cut(s)	474
Bst1107I	GTATAC	1 cut(s)	1296
Bst2BI	CACGAG	1 cut(s)	588
Bst2UI	CCWGG	1 cut(s)	132
Bst4CI	ACNGT	4 cut(s)	114, 582, 801, 872
Bst6I	CTCTTC	3 cut(s)	452, 857, 1338
BstAFI	CTTAAG	1 cut(s)	1166
BstC8I	GCNNGC	1 cut(s)	471
BstDEI	CTNAG	8 cut(s)	258, 411, 436, 454, 640, 653, 1547, 1701
BstENI	CCTNNNNNAGG	1 cut(s)	704
BstF5I	GGATG	3 cut(s)	930, 1403, 1566
BstHHI	GCGC	2 cut(s)	308, 1589
BstKTI	GATC	9 cut(s)	101, 462, 517, 570, 576, 821, 1306, 1411, 1726
BstMAI	GTCTC	2 cut(s)	381, 553
BstMBI	GATC	9 cut(s)	98, 459, 514, 567, 573, 818, 1303, 1408, 1723
BstMCI	CGRYCG	1 cut(s)	821
BstMWI	GCNNNNNNNGC	4 cut(s)	166, 178, 394, 617
BstNI	CCWGG	1 cut(s)	132
BstPAI	GACNNNNGTC	1 cut(s)	333
BstSCI	CCNGG	4 cut(s)	130, 286, 315, 421
BstSFI	CTRYAG	1 cut(s)	729
BstV1I	GCAGC	2 cut(s)	375, 430
BstV2I	GAAGAC	1 cut(s)	1590
BstX2I	RGATCY	2 cut(s)	1408, 1723
BstYI	RGATCY	2 cut(s)	1408, 1723
BstZ17I	GTATAC	1 cut(s)	1296
BsuRI	GGCC	2 cut(s)	154, 1089
BtsCI	GGATG	3 cut(s)	930, 1403, 1566
BtsIMutI	CAGTG	2 cut(s)	444, 462
BveI	ACCTGC	1 cut(s)	584
Cac8I	GCNNGC	1 cut(s)	471
CciI	TCATGA	2 cut(s)	570, 1657
CfoI	GCGC	2 cut(s)	308, 1589
Cfr10I	RCCGGY	1 cut(s)	1782
Cfr13I	GGNCC	3 cut(s)	153, 313, 1088
CseI	GACGC	1 cut(s)	917
Csp6I	GTAC	6 cut(s)	128, 347, 900, 1193, 1228, 1422
CspAI	ACCGGT	1 cut(s)	1782
CviAII	CATG	7 cut(s)	117, 571, 1050, 1426, 1489, 1534, 1658
CviQI	GTAC	6 cut(s)	128, 347, 900, 1193, 1228, 1422
DdeI	CTNAG	8 cut(s)	258, 411, 436, 454, 640, 653, 1547, 1701
DpnI	GATC	9 cut(s)	100, 461, 516, 569, 575, 820, 1305, 1410, 1725
DpnII	GATC	9 cut(s)	98, 459, 514, 567, 573, 818, 1303, 1408, 1723
Eam1104I	CTCTTC	3 cut(s)	452, 857, 1338
EarI	CTCTTC	3 cut(s)	452, 857, 1338
EciI	GGCGGA	1 cut(s)	540
Eco130I	CCWWGG	1 cut(s)	474
Eco31I	GGTCTC	1 cut(s)	553
Eco32I	GATATC	1 cut(s)	1798
Eco47I	GGWCC	1 cut(s)	313
Eco57I	CTGAAG	2 cut(s)	851, 1710
Eco88I	CYCGRG	1 cut(s)	331
EcoNI	CCTNNNNNAGG	1 cut(s)	704
EcoO109I	RGGNCCY	1 cut(s)	1088
EcoRII	CCWGG	1 cut(s)	130
EcoRV	GATATC	1 cut(s)	1798
EcoT14I	CCWWGG	1 cut(s)	474
ErhI	CCWWGG	1 cut(s)	474
Esp3I	CGTCTC	1 cut(s)	381
FaeI	CATG	7 cut(s)	120, 574, 1053, 1429, 1492, 1537, 1661
FatI	CATG	7 cut(s)	116, 570, 1049, 1425, 1488, 1533, 1657
FauI	CCCGC	1 cut(s)	26
FauNDI	CATATG	1 cut(s)	1633
FbaI	TGATCA	3 cut(s)	459, 567, 573
FblI	GTMKAC	1 cut(s)	1295
Fnu4HI	GCNGC	5 cut(s)	167, 170, 389, 419, 845
FokI	GGATG	3 cut(s)	937, 1410, 1573
Fsp4HI	GCNGC	5 cut(s)	167, 170, 389, 419, 845
FspBI	CTAG	5 cut(s)	480, 882, 1155, 1392, 1412
GlaI	GCGC	2 cut(s)	307, 1588
GluI	GCNGC	5 cut(s)	167, 170, 389, 419, 845
GsaI	CCCAGC	2 cut(s)	543, 1035
GsuI	CTGGAG	1 cut(s)	1185
HaeIII	GGCC	2 cut(s)	154, 1089
HapII	CCGG	5 cut(s)	288, 316, 422, 1757, 1783
HgaI	GACGC	1 cut(s)	917
HhaI	GCGC	2 cut(s)	308, 1589
Hin1II	CATG	7 cut(s)	120, 574, 1053, 1429, 1492, 1537, 1661
Hin6I	GCGC	2 cut(s)	306, 1587
HinP1I	GCGC	2 cut(s)	306, 1587
HincII	GTYRAC	1 cut(s)	599
HindII	GTYRAC	1 cut(s)	599
HindIII	AAGCTT	1 cut(s)	1467
HpaII	CCGG	5 cut(s)	288, 316, 422, 1757, 1783
HphI	GGTGA	4 cut(s)	168, 259, 442, 971
Hpy166II	GTNNAC	3 cut(s)	599, 902, 1296
Hpy8I	GTNNAC	3 cut(s)	599, 902, 1296
Hpy99I	CGWCG	1 cut(s)	933
HpyAV	CCTTC	8 cut(s)	95, 704, 829, 905, 963, 968, 1250, 1678
HpyCH4III	ACNGT	4 cut(s)	114, 582, 801, 872
HpyCH4IV	ACGT	2 cut(s)	893, 1103
HpyCH4V	TGCA	6 cut(s)	391, 593, 944, 992, 1131, 1446
HpyF10VI	GCNNNNNNNGC	4 cut(s)	166, 178, 394, 617
HpyF3I	CTNAG	8 cut(s)	258, 411, 436, 454, 640, 653, 1547, 1701
HpySE526I	ACGT	2 cut(s)	893, 1103
Hsp92II	CATG	7 cut(s)	120, 574, 1053, 1429, 1492, 1537, 1661
HspAI	GCGC	2 cut(s)	306, 1587
Ksp22I	TGATCA	3 cut(s)	459, 567, 573
Kzo9I	GATC	9 cut(s)	98, 459, 514, 567, 573, 818, 1303, 1408, 1723
LguI	GCTCTTC	1 cut(s)	452
LmnI	GCTCC	4 cut(s)	267, 303, 415, 1063
Lsp1109I	GCAGC	2 cut(s)	375, 430
LweI	GCATC	6 cut(s)	288, 547, 769, 915, 1006, 1388
MaeI	CTAG	5 cut(s)	480, 882, 1155, 1392, 1412
MaeII	ACGT	2 cut(s)	893, 1103
MaeIII	GTNAC	3 cut(s)	174, 866, 889
MalI	GATC	9 cut(s)	100, 461, 516, 569, 575, 820, 1305, 1410, 1725
MbiI	CCGCTC	2 cut(s)	844, 1066
MboI	GATC	9 cut(s)	98, 459, 514, 567, 573, 818, 1303, 1408, 1723
MfeI	CAATTG	1 cut(s)	993
MflI	RGATCY	2 cut(s)	1408, 1723
MhlI	GDGCHC	1 cut(s)	437
MlyI	GAGTC	4 cut(s)	343, 349, 500, 638
MmeI	TCCRAC	2 cut(s)	301, 902
MroXI	GAANNNNTTC	2 cut(s)	446, 1457
MseI	TTAA	3 cut(s)	1167, 1680, 1787
MslI	CAYNNNNRTG	1 cut(s)	455
MspCI	CTTAAG	1 cut(s)	1166
MspI	CCGG	5 cut(s)	288, 316, 422, 1757, 1783
MspR9I	CCNGG	4 cut(s)	132, 288, 317, 423
MunI	CAATTG	1 cut(s)	993
Mva1269I	GAATGC	1 cut(s)	994
MvaI	CCWGG	1 cut(s)	132
MwoI	GCNNNNNNNGC	4 cut(s)	166, 178, 394, 617
NciI	CCSGG	3 cut(s)	288, 317, 423
NdeI	CATATG	1 cut(s)	1633
NdeII	GATC	9 cut(s)	98, 459, 514, 567, 573, 818, 1303, 1408, 1723
NlaIII	CATG	7 cut(s)	120, 574, 1053, 1429, 1492, 1537, 1661
NlaIV	GGNNCC	1 cut(s)	1090
NmuCI	GTSAC	3 cut(s)	174, 866, 889
OliI	CACNNNNGTG	1 cut(s)	455
PagI	TCATGA	2 cut(s)	570, 1657
PciSI	GCTCTTC	1 cut(s)	452
PcsI	WCGNNNNNNNCGW	4 cut(s)	170, 366, 586, 928
PctI	GAATGC	1 cut(s)	994
PdmI	GAANNNNTTC	2 cut(s)	446, 1457
PflFI	GACNNNGTC	1 cut(s)	317
PinAI	ACCGGT	1 cut(s)	1782
PkrI	GCNGC	5 cut(s)	168, 171, 390, 420, 846
Ple19I	CGATCG	1 cut(s)	821
PleI	GAGTC	4 cut(s)	342, 348, 499, 638
PpsI	GAGTC	4 cut(s)	342, 348, 499, 638
PshAI	GACNNNNGTC	1 cut(s)	333
PsiI	TTATAA	1 cut(s)	792
Psp6I	CCWGG	1 cut(s)	130
PspFI	CCCAGC	2 cut(s)	539, 1031
PspGI	CCWGG	1 cut(s)	130
PspN4I	GGNNCC	1 cut(s)	1090
PspPI	GGNCC	3 cut(s)	153, 313, 1088
PsuI	RGATCY	2 cut(s)	1408, 1723
PsyI	GACNNNGTC	1 cut(s)	317
PvuI	CGATCG	1 cut(s)	821
RsaI	GTAC	6 cut(s)	129, 348, 901, 1194, 1229, 1423
RsaNI	GTAC	6 cut(s)	128, 347, 900, 1193, 1228, 1422
RseI	CAYNNNNRTG	1 cut(s)	455
SapI	GCTCTTC	1 cut(s)	452
SaqAI	TTAA	3 cut(s)	1167, 1680, 1787
SatI	GCNGC	5 cut(s)	167, 170, 389, 419, 845
Sau3AI	GATC	9 cut(s)	98, 459, 514, 567, 573, 818, 1303, 1408, 1723
Sau96I	GGNCC	3 cut(s)	153, 313, 1088
SchI	GAGTC	4 cut(s)	343, 349, 500, 638
ScrFI	CCNGG	4 cut(s)	132, 288, 317, 423
SduI	GDGCHC	1 cut(s)	437
SfaNI	GCATC	6 cut(s)	288, 547, 769, 915, 1006, 1388
SfcI	CTRYAG	1 cut(s)	729
SinI	GGWCC	1 cut(s)	313
SmiMI	CAYNNNNRTG	1 cut(s)	455
SmlI	CTYRAG	1 cut(s)	1166
SmoI	CTYRAG	1 cut(s)	1166
SsiI	CCGC	9 cut(s)	19, 167, 170, 179, 525, 602, 844, 1066, 1511
SspMI	CTAG	5 cut(s)	480, 882, 1155, 1392, 1412
StyD4I	CCNGG	4 cut(s)	130, 286, 315, 421
StyI	CCWWGG	1 cut(s)	474
TaaI	ACNGT	4 cut(s)	114, 582, 801, 872
TaiI	ACGT	2 cut(s)	896, 1106
TaqI	TCGA	9 cut(s)	219, 327, 360, 369, 517, 616, 763, 817, 821
TauI	GCSGC	3 cut(s)	169, 172, 847
Tru1I	TTAA	3 cut(s)	1167, 1680, 1787
Tru9I	TTAA	3 cut(s)	1167, 1680, 1787
TscAI	CASTG	2 cut(s)	444, 462
TseFI	GTSAC	3 cut(s)	174, 866, 889
TseI	GCWGC	2 cut(s)	388, 418
Tsp45I	GTSAC	3 cut(s)	174, 866, 889
TspDTI	ATGAA	8 cut(s)	875, 1277, 1424, 1466, 1550, 1557, 1665, 1674
TspGWI	ACGGA	1 cut(s)	115
TspRI	CASTG	2 cut(s)	444, 462
Tth111I	GACNNNGTC	1 cut(s)	317
Vha464I	CTTAAG	1 cut(s)	1166
VpaK11BI	GGWCC	1 cut(s)	313
XagI	CCTNNNNNAGG	1 cut(s)	704
XapI	RAATTY	3 cut(s)	227, 626, 1457
XmiI	GTMKAC	1 cut(s)	1295
XmnI	GAANNNNTTC	2 cut(s)	446, 1457
XspI	CTAG	5 cut(s)	480, 882, 1155, 1392, 1412

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.