Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0016204

Physical Location & Seq

Genomic Coordinates Forward (+)

68021683 .. 68023817

Gene Structure 2135 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G044930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1800 bp

ATGCCCTCACCACAGAAACCCCGCCATTTTCTCTCTCTGGCCCTCATCTTCTTCAAGCCAAACCCAAACCCTAACTTTCGTATTCTCTCTCTTCGATCCTTCTCCGACCAATCATGGCTGTCCGTACCCGGAAACCCCCTAATCAAGTGGCCGTCGCTCTCACCGCCTCCATCTCTCCCTTCCCCTTCCCCTAACCCTAATTTTGACCCCAAATTTTCACAAAATGACTTGTCCGCAATCACTAACCTGCTCGCCGACCCACCCGGTCCATCGCTTCGGACCGCATTGGACCGGGCCGGAATTGACCCGAGTCCGAGTCTGCTACAGGCTGTGTTCGACCACTTTGATTCGTCTCCCAAATTGCTGCACACGCTGTTTGTTTGGGCTGAGAAGCAGCCCGGGTTTCGATGCTCTGCGACGCTCTTCACCTCCATGATCAATGTGCTTGCCAAGGCTAGGGACTTTGAGTCTGCGTGGTCTATGATTCTTGATCGAATCGGCGGAGATAAGGAGCCTGGGTTGGTTTCTGTAGATGCATTTGTCATCATGATCAGACGGTATGCTCGTGCAGGTCAACCCCAATCAGCAATTCGAGCTTTTGAATTTGCAAGTACCTTAGAGTCATTTCTCAATTCTGAATCAGAAATGAGTTTGTTTGAAATCTTACTGGATTCCCTTTGTAAGGAGGGTCTTGTGAGGGTGGCCTCGGAATATTTTGATGGGAAAAGAAAGTTGCATCGACATTGGATTCCATCGGTTCGGGTTTATAATATACTGTTGAATGGATGGTTTCGAGCGAGGAAGCTGAAGAAGGCAGAGCGGCTTTGGGTTGAGATGAAGAGAGACGGCGTGAAACCTAGTGTCGTGACATATGGTACACTTGTAGAAGGATACTGTCGGATGCGTCGTCCTGAAATCTCAATGGAGTTGGTGGGTGAGATGAGGAGGGAAGGAATTGAACCAAATGCGATTGTGTTTAATCCAATAATTGATGCTTTGGGGGAAGCTGGGAGGTTCAAGGAAGCGTGGGGGATGATGGAGTGGTTTTCAGTTCTGGAATCAGGCCCCACTATTTCGACGTACAATTCTCTGGTAAAGGGCTATTGCAAGGCCGGAAATCTTGTAGAAGCTAGTAGGATTATTAAGATGATGATAAGTAGGGGTATTGTACCAACTCCAACAACCTATAACTATTTCTTTAGGTTCTTTTCAAAGTCTGGGAAAATTGAGGAAGGAATGAACCTTTATACCAAAATGATTGAATCTGGGCATACCCCAGATCGTCTTACTTTCCATCTTCTGTTGAAGATGTTATGTGAAGAGGGAAGATTGGATTTGGCTGTTCAAGTTAGCAAGGAAATGAGAACTAGGGGATGTGATATGGATTTAGCCACGAGTACCATGTTGATTCATTTGCTCTGCAAGATGAATAAATTTAAAGAAGCTTTGTCAGAGTTTGAGGACATGATACGCAGGGGTTTAGTTCCGCAGTATCTAACTTTTCAGAACATGTATGATGAACTAAGGAAACAAGGAATGACTGAAATGGCACGAAAGCTGTGCGCCCTGATGTCTTCTGTTCCTCATTCAACAAAGTTGCCGAATACATATGTCAAAGATAGAGATGAATCTCATGCAAGGAGAAAATCCATAATTCAGAAGGCTGAAGCAATGTCTAATGTGTTGAAAACTTGTTCAGATCCAAGAGAACTTGTTAAGCACAGAAGTTCGCCGGATACTGTTGAATCAAGAGCAAACCAGTTAATAGAGAATATTAAGACAAAAGCTAACATTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009787 GO:0009788 GO:0009791 GO:0009845 GO:0009966 GO:0009968 GO:0009987 GO:0010029 GO:0010646 GO:0010648 GO:0016070 GO:0016787 GO:0016788 GO:0023051 GO:0023057 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0065007 GO:0071704 GO:0090304 GO:0090305 GO:0090351 GO:0097159 GO:1900140 GO:1901360 GO:1901363 GO:1901419 GO:1901420 GO:1905957 GO:1905958 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

599

Amino Acids

68.07

Weight (kDa)

9.36

Isoelectric Point (pI)

48.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	251 - 300	3.5e-15	PPR repeat family
PPR_3	PF13812	251 - 294	5.2e-07	Pentatricopeptide repeat domain
PPR_3	PF13812	275 - 335	6.4e-13	Pentatricopeptide repeat domain
PPR_1	PF12854	282 - 315	4.7e-08	PPR repeat
PPR_2	PF13041	286 - 326	5.2e-08	PPR repeat family
PPR	PF01535	289 - 319	9.9e-06	PPR repeat
PPR_2	PF13041	356 - 403	1.8e-10	PPR repeat family
PPR_1	PF12854	356 - 384	4.5e-08	PPR repeat
PPR_3	PF13812	358 - 402	5.4e-06	Pentatricopeptide repeat domain
PPR	PF01535	359 - 389	2.9e-08	PPR repeat
PPR_2	PF13041	395 - 439	4.9e-08	PPR repeat family
PPR_2	PF13041	431 - 475	5.6e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016204)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11310
fragaria_vesca	FvH4_2g30070
malus_domestica	MD08G1137400.v1.1
prunus_persica	Prupe.1G467400_v2.0.a1
pyrus_communis	pycom08g11630
rosa_chinensis	RchiOBHm_Chr6g0312841
rosa_laevigata	RLG00000010293
rosa_multiflora	Rmu_sc0008049.1_g000008
rosa_roxburghii	Rroxscaffold_7G00156440
rosa_rugosa	Rorug06G0399900
rosa_samantha	Rh6AG517200 Rh6BG528600 Rh6CG533300 Rh6DG519800
rosa_wichuraiana	Rw6G044930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	768
Acc36I	ACCTGC	2 cut(s)	255, 560
AccBSI	CCGCTC	1 cut(s)	820
AciI	CCGC	7 cut(s)	22, 164, 234, 282, 501, 820, 1487
AclWI	GGATC	2 cut(s)	90, 1694
AcoI	YGGCCR	1 cut(s)	149
AcsI	RAATTY	3 cut(s)	212, 602, 1433
AcuI	CTGAAG	2 cut(s)	827, 1686
AfaI	GTAC	6 cut(s)	126, 613, 877, 1082, 1170, 1399
AfiI	CCNNNNNNNGG	2 cut(s)	456, 682
AflIII	ACRYGT	1 cut(s)	1509
AhdI	GACNNNNNGTC	1 cut(s)	466
AjnI	CCWGG	1 cut(s)	514
AjuI	GAANNNNNNNTTGG	2 cut(s)	573, 605
AluBI	AGCT	7 cut(s)	596, 805, 1007, 1130, 1445, 1558, 1787
AluI	AGCT	7 cut(s)	596, 805, 1007, 1130, 1445, 1558, 1787
Alw26I	GTCTC	2 cut(s)	357, 837
AlwI	GGATC	2 cut(s)	90, 1694
Ama87I	CYCGRG	2 cut(s)	307, 398
AoxI	GGCC	6 cut(s)	39, 149, 294, 702, 1063, 1110
ApeKI	GCWGC	2 cut(s)	364, 394
ApoI	RAATTY	3 cut(s)	212, 602, 1433
AspLEI	GCGC	1 cut(s)	1565
AspS9I	GGNCC	6 cut(s)	40, 266, 279, 289, 294, 1064
AsuC2I	CCSGG	5 cut(s)	129, 264, 293, 399, 400
AsuHPI	GGTGA	3 cut(s)	153, 418, 947
AvaI	CYCGRG	2 cut(s)	307, 398
AvaII	GGWCC	3 cut(s)	266, 279, 289
BaeI	ACNNNNGTAYC	2 cut(s)	867, 900
BauI	CACGAG	2 cut(s)	564, 1393
BbsI	GAAGAC	1 cut(s)	1566
BbvI	GCAGC	2 cut(s)	351, 406
BccI	CCATC	7 cut(s)	178, 277, 713, 760, 780, 1030, 1302
BceAI	ACGGC	2 cut(s)	136, 862
BcgI	CGANNNNNNTGC	2 cut(s)	1542, 1576
BciT130I	CCWGG	1 cut(s)	516
BciVI	GTATCC	2 cut(s)	884, 1729
BclI	TGATCA	2 cut(s)	435, 549
BcnI	CCSGG	5 cut(s)	129, 264, 293, 399, 400
BcoDI	GTCTC	2 cut(s)	357, 837
BfaI	CTAG	4 cut(s)	456, 858, 1131, 1368
BfmI	CTRYAG	2 cut(s)	323, 528
BfuAI	ACCTGC	2 cut(s)	255, 560
BfuI	GTATCC	2 cut(s)	884, 1729
BisI	GCNGC	3 cut(s)	365, 395, 821
BlsI	GCNGC	3 cut(s)	366, 396, 822
Bme1390I	CCNGG	6 cut(s)	129, 264, 293, 399, 400, 516
Bme18I	GGWCC	3 cut(s)	266, 279, 289
BmeRI	GACNNNNNGTC	1 cut(s)	466
BmeT110I	CYCGRG	2 cut(s)	307, 398
BmgT120I	GGNCC	6 cut(s)	40, 266, 279, 289, 294, 1064
BmiI	GGNNCC	2 cut(s)	513, 1066
BmrFI	CCNGG	6 cut(s)	129, 264, 293, 399, 400, 516
BmsI	GCATC	5 cut(s)	398, 523, 745, 891, 982
BoxI	GACNNNNGTC	1 cut(s)	309
BpiI	GAAGAC	1 cut(s)	1566
BpuMI	CCSGG	5 cut(s)	129, 264, 293, 399, 400
BsaJI	CCNNGG	4 cut(s)	398, 450, 515, 705
BsaXI	ACNNNNNCTCC	2 cut(s)	503, 533
Bsc4I	CCNNNNNNNGG	2 cut(s)	456, 682
Bse1I	ACTGG	2 cut(s)	672, 1759
Bse3DI	GCAATG	1 cut(s)	1677
BseBI	CCWGG	1 cut(s)	516
BseDI	CCNNGG	4 cut(s)	398, 450, 515, 705
BseGI	GGATG	4 cut(s)	791, 906, 1038, 1379
BseLI	CCNNNNNNNGG	2 cut(s)	456, 682
BseMI	GCAATG	1 cut(s)	1677
BseMII	CTCAG	1 cut(s)	378
BseNI	ACTGG	2 cut(s)	672, 1759
BseRI	GAGGAG	1 cut(s)	958
BseXI	GCAGC	2 cut(s)	351, 406
BseYI	CCCAGC	1 cut(s)	1007
BsgI	GTGCAG	2 cut(s)	350, 588
BshFI	GGCC	6 cut(s)	41, 151, 296, 704, 1065, 1112
BsiHKCI	CYCGRG	2 cut(s)	307, 398
BsiSI	CCGG	7 cut(s)	129, 264, 292, 297, 399, 1113, 1733
BslFI	GGGAC	1 cut(s)	473
BslI	CCNNNNNNNGG	2 cut(s)	456, 682
BsmAI	GTCTC	2 cut(s)	357, 837
BsmBI	CGTCTC	2 cut(s)	357, 837
BsmFI	GGGAC	1 cut(s)	473
BsnI	GGCC	6 cut(s)	41, 151, 296, 704, 1065, 1112
BsoBI	CYCGRG	2 cut(s)	307, 398
Bsp143I	GATC	6 cut(s)	95, 435, 490, 549, 1279, 1699
BspACI	CCGC	7 cut(s)	22, 164, 234, 282, 501, 820, 1487
BspANI	GGCC	6 cut(s)	41, 151, 296, 704, 1065, 1112
BspCNI	CTCAG	1 cut(s)	379
BspHI	TCATGA	1 cut(s)	546
BspLI	GGNNCC	2 cut(s)	513, 1066
BspMI	ACCTGC	2 cut(s)	255, 560
BspPI	GGATC	2 cut(s)	90, 1694
BspQI	GCTCTTC	1 cut(s)	428
BsrBI	CCGCTC	1 cut(s)	820
BsrDI	GCAATG	1 cut(s)	1677
BsrI	ACTGG	2 cut(s)	672, 1759
BssECI	CCNNGG	4 cut(s)	398, 450, 515, 705
BssMI	GATC	6 cut(s)	95, 435, 490, 549, 1279, 1699
BssSI	CACGAG	2 cut(s)	564, 1393
BssT1I	CCWWGG	1 cut(s)	450
Bst2BI	CACGAG	2 cut(s)	564, 1393
Bst2UI	CCWGG	1 cut(s)	516
Bst4CI	ACNGT	4 cut(s)	558, 777, 896, 1741
Bst6I	CTCTTC	4 cut(s)	96, 428, 833, 1314
BstC8I	GCNNGC	2 cut(s)	252, 447
BstDEI	CTNAG	3 cut(s)	387, 616, 1523
BstENI	CCTNNNNNAGG	1 cut(s)	680
BstF5I	GGATG	4 cut(s)	791, 906, 1038, 1379
BstHHI	GCGC	1 cut(s)	1565
BstKTI	GATC	6 cut(s)	98, 438, 493, 552, 1282, 1702
BstMAI	GTCTC	2 cut(s)	357, 837
BstMBI	GATC	6 cut(s)	95, 435, 490, 549, 1279, 1699
BstMWI	GCNNNNNNNGC	3 cut(s)	163, 370, 593
BstNI	CCWGG	1 cut(s)	516
BstNSI	RCATGY	1 cut(s)	1513
BstPAI	GACNNNNGTC	1 cut(s)	309
BstSCI	CCNGG	6 cut(s)	127, 262, 291, 397, 398, 514
BstSFI	CTRYAG	2 cut(s)	323, 528
BstV1I	GCAGC	2 cut(s)	351, 406
BstV2I	GAAGAC	1 cut(s)	1566
BstX2I	RGATCY	1 cut(s)	1699
BstYI	RGATCY	1 cut(s)	1699
BsuI	GTATCC	2 cut(s)	884, 1729
BsuRI	GGCC	6 cut(s)	41, 151, 296, 704, 1065, 1112
BtgZI	GCGATG	1 cut(s)	255
BtsCI	GGATG	4 cut(s)	791, 906, 1038, 1379
BveI	ACCTGC	2 cut(s)	255, 560
Cac8I	GCNNGC	2 cut(s)	252, 447
CciI	TCATGA	1 cut(s)	546
CfoI	GCGC	1 cut(s)	1565
Cfr13I	GGNCC	6 cut(s)	40, 266, 279, 289, 294, 1064
Cfr9I	CCCGGG	1 cut(s)	398
CpoI	CGGWCCG	1 cut(s)	279
CseI	GACGC	2 cut(s)	427, 893
Csp6I	GTAC	6 cut(s)	125, 612, 876, 1081, 1169, 1398
CspI	CGGWCCG	1 cut(s)	279
CviAII	CATG	7 cut(s)	114, 433, 547, 1402, 1465, 1510, 1634
CviQI	GTAC	6 cut(s)	125, 612, 876, 1081, 1169, 1398
DdeI	CTNAG	3 cut(s)	387, 616, 1523
DpnI	GATC	6 cut(s)	97, 437, 492, 551, 1281, 1701
DpnII	GATC	6 cut(s)	95, 435, 490, 549, 1279, 1699
DraI	TTTAAA	1 cut(s)	1438
DriI	GACNNNNNGTC	1 cut(s)	466
EaeI	YGGCCR	1 cut(s)	149
Eam1104I	CTCTTC	4 cut(s)	96, 428, 833, 1314
Eam1105I	GACNNNNNGTC	1 cut(s)	466
EarI	CTCTTC	4 cut(s)	96, 428, 833, 1314
EciI	GGCGGA	1 cut(s)	516
Eco130I	CCWWGG	1 cut(s)	450
Eco47I	GGWCC	3 cut(s)	266, 279, 289
Eco57I	CTGAAG	2 cut(s)	827, 1686
Eco88I	CYCGRG	2 cut(s)	307, 398
EcoNI	CCTNNNNNAGG	1 cut(s)	680
EcoO109I	RGGNCCY	1 cut(s)	1064
EcoRII	CCWGG	1 cut(s)	514
EcoT14I	CCWWGG	1 cut(s)	450
EcoT22I	ATGCAT	1 cut(s)	538
ErhI	CCWWGG	1 cut(s)	450
Esp3I	CGTCTC	2 cut(s)	357, 837
FaeI	CATG	7 cut(s)	117, 436, 550, 1405, 1468, 1513, 1637
FaqI	GGGAC	1 cut(s)	473
FatI	CATG	7 cut(s)	113, 432, 546, 1401, 1464, 1509, 1633
FauI	CCCGC	1 cut(s)	29
FauNDI	CATATG	2 cut(s)	871, 1609
FbaI	TGATCA	2 cut(s)	435, 549
Fnu4HI	GCNGC	3 cut(s)	365, 395, 821
FokI	GGATG	4 cut(s)	798, 913, 1045, 1386
Fsp4HI	GCNGC	3 cut(s)	365, 395, 821
FspBI	CTAG	4 cut(s)	456, 858, 1131, 1368
GlaI	GCGC	1 cut(s)	1564
GluI	GCNGC	3 cut(s)	365, 395, 821
GsaI	CCCAGC	1 cut(s)	1011
HaeIII	GGCC	6 cut(s)	41, 151, 296, 704, 1065, 1112
HapII	CCGG	7 cut(s)	129, 264, 292, 297, 399, 1113, 1733
HgaI	GACGC	2 cut(s)	427, 893
HhaI	GCGC	1 cut(s)	1565
Hin1II	CATG	7 cut(s)	117, 436, 550, 1405, 1468, 1513, 1637
Hin6I	GCGC	1 cut(s)	1563
HinP1I	GCGC	1 cut(s)	1563
HincII	GTYRAC	1 cut(s)	575
HindII	GTYRAC	1 cut(s)	575
HindIII	AAGCTT	1 cut(s)	1443
HpaII	CCGG	7 cut(s)	129, 264, 292, 297, 399, 1113, 1733
HphI	GGTGA	3 cut(s)	153, 418, 947
Hpy166II	GTNNAC	2 cut(s)	575, 878
Hpy188III	TCNNGA	6 cut(s)	488, 547, 865, 911, 1055, 1749
Hpy8I	GTNNAC	2 cut(s)	575, 878
Hpy99I	CGWCG	4 cut(s)	157, 421, 909, 1081
HpyAV	CCTTC	8 cut(s)	109, 189, 195, 805, 881, 944, 1226, 1654
HpyCH4III	ACNGT	4 cut(s)	558, 777, 896, 1741
HpyCH4IV	ACGT	1 cut(s)	1079
HpyCH4V	TGCA	8 cut(s)	367, 536, 569, 608, 736, 1107, 1422, 1637
HpyF10VI	GCNNNNNNNGC	3 cut(s)	163, 370, 593
HpyF3I	CTNAG	3 cut(s)	387, 616, 1523
HpySE526I	ACGT	1 cut(s)	1079
Hsp92II	CATG	7 cut(s)	117, 436, 550, 1405, 1468, 1513, 1637
HspAI	GCGC	1 cut(s)	1563
Ksp22I	TGATCA	2 cut(s)	435, 549
Kzo9I	GATC	6 cut(s)	95, 435, 490, 549, 1279, 1699
LguI	GCTCTTC	1 cut(s)	428
LmnI	GCTCC	1 cut(s)	511
Lsp1109I	GCAGC	2 cut(s)	351, 406
LweI	GCATC	5 cut(s)	398, 523, 745, 891, 982
MaeI	CTAG	4 cut(s)	456, 858, 1131, 1368
MaeII	ACGT	1 cut(s)	1079
MaeIII	GTNAC	1 cut(s)	865
MalI	GATC	6 cut(s)	97, 437, 492, 551, 1281, 1701
MbiI	CCGCTC	1 cut(s)	820
MboI	GATC	6 cut(s)	95, 435, 490, 549, 1279, 1699
MflI	RGATCY	1 cut(s)	1699
MlyI	GAGTC	4 cut(s)	319, 325, 476, 629
MmeI	TCCRAC	3 cut(s)	129, 878, 1202
Mph1103I	ATGCAT	1 cut(s)	538
MseI	TTAA	7 cut(s)	978, 1143, 1437, 1716, 1763, 1776, 1794
MslI	CAYNNNNRTG	1 cut(s)	431
MspI	CCGG	7 cut(s)	129, 264, 292, 297, 399, 1113, 1733
MspR9I	CCNGG	6 cut(s)	129, 264, 293, 399, 400, 516
MvaI	CCWGG	1 cut(s)	516
MwoI	GCNNNNNNNGC	3 cut(s)	163, 370, 593
NciI	CCSGG	5 cut(s)	129, 264, 293, 399, 400
NdeI	CATATG	2 cut(s)	871, 1609
NdeII	GATC	6 cut(s)	95, 435, 490, 549, 1279, 1699
NlaIII	CATG	7 cut(s)	117, 436, 550, 1405, 1468, 1513, 1637
NlaIV	GGNNCC	2 cut(s)	513, 1066
NmuCI	GTSAC	1 cut(s)	865
NsiI	ATGCAT	1 cut(s)	538
NspI	RCATGY	1 cut(s)	1513
PagI	TCATGA	1 cut(s)	546
PciI	ACATGT	1 cut(s)	1509
PciSI	GCTCTTC	1 cut(s)	428
PcsI	WCGNNNNNNNCGW	2 cut(s)	562, 904
PkrI	GCNGC	3 cut(s)	366, 396, 822
PleI	GAGTC	4 cut(s)	318, 324, 475, 628
PpsI	GAGTC	4 cut(s)	318, 324, 475, 628
PscI	ACATGT	1 cut(s)	1509
PshAI	GACNNNNGTC	1 cut(s)	309
PsiI	TTATAA	1 cut(s)	768
Psp6I	CCWGG	1 cut(s)	514
PspFI	CCCAGC	1 cut(s)	1007
PspGI	CCWGG	1 cut(s)	514
PspN4I	GGNNCC	2 cut(s)	513, 1066
PspPI	GGNCC	6 cut(s)	40, 266, 279, 289, 294, 1064
PsuI	RGATCY	1 cut(s)	1699
RsaI	GTAC	6 cut(s)	126, 613, 877, 1082, 1170, 1399
RsaNI	GTAC	6 cut(s)	125, 612, 876, 1081, 1169, 1398
RseI	CAYNNNNRTG	1 cut(s)	431
Rsr2I	CGGWCCG	1 cut(s)	279
RsrII	CGGWCCG	1 cut(s)	279
SapI	GCTCTTC	1 cut(s)	428
SaqAI	TTAA	7 cut(s)	978, 1143, 1437, 1716, 1763, 1776, 1794
SatI	GCNGC	3 cut(s)	365, 395, 821
Sau3AI	GATC	6 cut(s)	95, 435, 490, 549, 1279, 1699
Sau96I	GGNCC	6 cut(s)	40, 266, 279, 289, 294, 1064
SchI	GAGTC	4 cut(s)	319, 325, 476, 629
ScrFI	CCNGG	6 cut(s)	129, 264, 293, 399, 400, 516
SfaNI	GCATC	5 cut(s)	398, 523, 745, 891, 982
SfcI	CTRYAG	2 cut(s)	323, 528
SinI	GGWCC	3 cut(s)	266, 279, 289
SmaI	CCCGGG	1 cut(s)	400
SmiMI	CAYNNNNRTG	1 cut(s)	431
SsiI	CCGC	7 cut(s)	22, 164, 234, 282, 501, 820, 1487
SspI	AATATT	2 cut(s)	713, 1774
SspMI	CTAG	4 cut(s)	456, 858, 1131, 1368
StyD4I	CCNGG	6 cut(s)	127, 262, 291, 397, 398, 514
StyI	CCWWGG	1 cut(s)	450
TaaI	ACNGT	4 cut(s)	558, 777, 896, 1741
TaiI	ACGT	1 cut(s)	1082
TaqI	TCGA	8 cut(s)	94, 336, 406, 493, 592, 739, 793, 1076
TauI	GCSGC	1 cut(s)	823
Tru1I	TTAA	7 cut(s)	978, 1143, 1437, 1716, 1763, 1776, 1794
Tru9I	TTAA	7 cut(s)	978, 1143, 1437, 1716, 1763, 1776, 1794
TseFI	GTSAC	1 cut(s)	865
TseI	GCWGC	2 cut(s)	364, 394
Tsp45I	GTSAC	1 cut(s)	865
TspDTI	ATGAA	6 cut(s)	851, 1253, 1400, 1442, 1533, 1641
TspGWI	ACGGA	1 cut(s)	112
TspMI	CCCGGG	1 cut(s)	398
VpaK11BI	GGWCC	3 cut(s)	266, 279, 289
XagI	CCTNNNNNAGG	1 cut(s)	680
XapI	RAATTY	3 cut(s)	212, 602, 1433
XceI	RCATGY	1 cut(s)	1513
XmaI	CCCGGG	1 cut(s)	398
XspI	CTAG	4 cut(s)	456, 858, 1131, 1368
Zsp2I	ATGCAT	1 cut(s)	538

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.