Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0016204

Physical Location & Seq

Genomic Coordinates Forward (+)

13152266 .. 13155806

Gene Structure 3541 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1137400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGCCATCTTACAATCCCCGCCAATTTTTCTCTCTCACCCTCTTCCTCTTCAAACCAAACCCTAACCTCCATCTTCTCTCTCGCTCGCCGCGATTCTTCTCCAACCAATCATGGCTCTCCGTACGCGGCAACCCCATCATCAAGTGGCCCTCACCACCCGACGTACCCTGCTCCCTCCCACACCTAAACACAAACCCTAACCCTAGCTCCGGCCCCAGTTTTTCACCGATGGACTTCTCCACCATCGCTAACTTGCTCACCGACCCAACCATTTCCCCCGGTTCATCGCTCCAGAGCGCATTGGACCGGACCGGAATCGAGCCGGGTCAGGGTCTGGTACAAGCTGTGTTCGATCACTTCGATTCGTCCCCCAAATTGCTGCACACTCTGTTTCTTTGGGCGGAGAAGCAGCCCGGGTTTCGATCCTCTGCGAAGCTCTTTGGGTCCGTGATCAATGTGCTGGCAAAGTCGAGGGAGTTCGACTCCGCCTGGTCTCTGATTCTCAATCGGATCGGAGGAGATGAGGAGCCTGGTTTGGTTTCGGCTGATACGTTTGTGATCATGATTAGACGGTATACCCGCGCAGGCATGCCTGAATCAGCAATTCGGACTTTTGAGTTTGCGAGTAATTTAGACTCATTTCTCAACTCCGAAGCAGAAATGAGTTTGTTTGAAGTATTGTTGGATTCCCTTTCTAAGGAAGGCCTCGTTAGGGTGGCTTCGGAATACTTCGATAGGAAAAGGAAGTTGCATCCGAATTGGATTCCATCAGTTCGCGTTTATAATATACTGCTGAATGGATGGTTCCGATCAAGGAAGCTGAAACAGGCAGAGCGGCTTTGGGTGGAAATGAGGAGGGAGAATGTGAAACCTAGTGTTGTAACGTATGGTACACTTGTGGAAGGATACTGCAGAATGCGTCGTGCTGAAATTGCAATTGAGTTGGTGAGCGAGATGAGGAGGGAAGGAGTTGAGCCCAATGCTATTGTGTATAATCCAATAATTGATGCGTTGGGGGAAGCTGGGAGGTTCAAGGAGGCACTGGGGATGATGGAGCGCTTTTTGGTCCTGGAATCAGGCCCCACCATTTCAACATACAATTCTCTGGTAAAGGGCTTTTGCAAGGCTGGAGACCTTGTAGGGGCTAGTAGGATCCTTAAGATGATGATAAGTCGGGGTACTGCCCCTACTCCAACAACCTATAACTATTTCTTTAGGTACTTTTCAAAGCATGGGAAAATTGAGGAGGGAATGAACCTTTATACCAAAATGATTGAATCTGGATATACCCCAGATCGGCTTACTTTCCAACTTTTGTTGAAGATGTTGTGCGAGGAGGAGAGATTGGATTTGGCAATTCAAGTTAGCAAGGAAATGAGATCTAGGGGATGGGATATGGATTTAGCTACAAGCACCATGTTGATTCATTTGCTTTGCAATATGCATAAACTCAAAGAGGCTTTTGAAGAATTTGAGGACATGATACGGAGGGGTTTAGTTCCTCAGTATATTACTTTCCAAAGAATGGATGATGTGTTGAGGAAACAAGGAATGAATCAAATGGCTTGGAAGCTGTGCAAAATGATGTCTTCTGTTCCCCATTCAACAAACTTGCCGGATACATATGTCAGAGATGAAGATGCATCTCGTGCAAGGAGAAAGTCTATAGTTCAGAAGGCCGAAGCAATGTCTGATTTGTTAAAAACTTGTTCAGATCCAAGAGAACTTGTCAAGTTTAGAAGATCGCCTGAAAATCTTGTATCAAGAGCGAACCAGTTGATAGAGGATATTAAGAGAAAAGCTAACATCCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009787 GO:0009788 GO:0009791 GO:0009845 GO:0009966 GO:0009968 GO:0009987 GO:0010029 GO:0010646 GO:0010648 GO:0016070 GO:0016787 GO:0016788 GO:0023051 GO:0023057 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0065007 GO:0071704 GO:0090304 GO:0090305 GO:0090351 GO:0097159 GO:1900140 GO:1901360 GO:1901363 GO:1901419 GO:1901420 GO:1905957 GO:1905958 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

605

Amino Acids

69.0

Weight (kDa)

9.21

Isoelectric Point (pI)

51.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	256 - 305	2.5e-14	PPR repeat family
PPR_long	PF17177	273 - 378	2.7e-06	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	280 - 340	1.2e-12	Pentatricopeptide repeat domain
PPR_1	PF12854	288 - 320	1.7e-09	PPR repeat
PPR_2	PF13041	291 - 338	9.5e-12	PPR repeat family
PPR	PF01535	294 - 324	4.9e-06	PPR repeat
PPR_2	PF13041	361 - 406	4.5e-09	PPR repeat family
PPR_1	PF12854	361 - 389	1.6e-07	PPR repeat
PPR	PF01535	364 - 393	1.3e-06	PPR repeat
PPR_2	PF13041	399 - 444	9.1e-10	PPR repeat family
PPR_2	PF13041	439 - 480	6.4e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016204)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11310
fragaria_vesca	FvH4_2g30070
malus_domestica	MD08G1137400.v1.1
prunus_persica	Prupe.1G467400_v2.0.a1
pyrus_communis	pycom08g11630
rosa_chinensis	RchiOBHm_Chr6g0312841
rosa_laevigata	RLG00000010293
rosa_multiflora	Rmu_sc0008049.1_g000008
rosa_roxburghii	Rroxscaffold_7G00156440
rosa_rugosa	Rorug06G0399900
rosa_samantha	Rh6AG517200 Rh6BG528600 Rh6CG533300 Rh6DG519800
rosa_wichuraiana	Rw6G044930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	783
AccB7I	CCANNNNNTGG	1 cut(s)	1525
AccBSI	CCGCTC	1 cut(s)	835
AccI	GTMKAC	1 cut(s)	575
AccII	CGCG	4 cut(s)	91, 126, 582, 777
AciI	CCGC	7 cut(s)	19, 89, 126, 401, 486, 580, 835
AclWI	GGATC	5 cut(s)	417, 518, 1147, 1160, 1709
AcsI	RAATTY	1 cut(s)	1469
AfaI	GTAC	6 cut(s)	123, 165, 339, 892, 1180, 1220
AfeI	AGCGCT	1 cut(s)	1058
AfiI	CCNNNNNNNGG	7 cut(s)	209, 329, 697, 712, 1141, 1296, 1525
AflII	CTTAAG	1 cut(s)	1157
AjnI	CCWGG	3 cut(s)	488, 529, 1068
AluBI	AGCT	8 cut(s)	207, 344, 436, 820, 1022, 1406, 1573, 1802
AluI	AGCT	8 cut(s)	207, 344, 436, 820, 1022, 1406, 1573, 1802
Alw26I	GTCTC	2 cut(s)	498, 1125
AlwI	GGATC	5 cut(s)	417, 518, 1147, 1160, 1709
AlwNI	CAGNNNCTG	1 cut(s)	334
Ama87I	CYCGRG	1 cut(s)	413
Aor51HI	AGCGCT	1 cut(s)	1058
AoxI	GGCC	5 cut(s)	146, 211, 703, 1078, 1677
ApeKI	GCWGC	2 cut(s)	379, 409
ApoI	RAATTY	1 cut(s)	1469
AspLEI	GCGC	3 cut(s)	299, 584, 1059
AspS9I	GGNCC	7 cut(s)	147, 212, 304, 309, 444, 1066, 1079
AsuC2I	CCSGG	4 cut(s)	279, 324, 414, 415
AsuHPI	GGTGA	5 cut(s)	28, 144, 216, 250, 958
AvaI	CYCGRG	1 cut(s)	413
AvaII	GGWCC	4 cut(s)	304, 309, 444, 1066
BaeI	ACNNNNGTAYC	6 cut(s)	540, 573, 882, 915, 1611, 1644
BamHI	GGATCC	1 cut(s)	1152
BanII	GRGCYC	1 cut(s)	978
BauI	CACGAG	1 cut(s)	1647
BbsI	GAAGAC	1 cut(s)	1581
BbvI	GCAGC	2 cut(s)	366, 421
BccI	CCATC	9 cut(s)	13, 78, 143, 223, 251, 775, 795, 1045, 1383
BciT130I	CCWGG	3 cut(s)	490, 531, 1070
BciVI	GTATCC	2 cut(s)	899, 1612
BclI	TGATCA	2 cut(s)	450, 558
BcnI	CCSGG	4 cut(s)	279, 324, 414, 415
BcoDI	GTCTC	2 cut(s)	498, 1125
BfaI	CTAG	4 cut(s)	204, 873, 1146, 1383
BfmI	CTRYAG	2 cut(s)	910, 1665
BfoI	RGCGCY	1 cut(s)	1060
BfrI	CTTAAG	1 cut(s)	1157
BfuI	GTATCC	2 cut(s)	899, 1612
BglII	AGATCT	1 cut(s)	1379
BisI	GCNGC	5 cut(s)	89, 127, 380, 410, 836
BlsI	GCNGC	5 cut(s)	90, 128, 381, 411, 837
Bme1390I	CCNGG	7 cut(s)	279, 324, 414, 415, 490, 531, 1070
Bme18I	GGWCC	4 cut(s)	304, 309, 444, 1066
BmeT110I	CYCGRG	1 cut(s)	413
BmgT120I	GGNCC	7 cut(s)	147, 212, 304, 309, 444, 1066, 1079
BmiI	GGNNCC	6 cut(s)	214, 445, 528, 806, 1081, 1154
BmrFI	CCNGG	7 cut(s)	279, 324, 414, 415, 490, 531, 1070
BmrI	ACTGGG	2 cut(s)	210, 1052
BmsI	GCATC	4 cut(s)	760, 997, 1630, 1652
BmuI	ACTGGG	2 cut(s)	210, 1052
BpiI	GAAGAC	1 cut(s)	1581
BplI	GAGNNNNNCTC	2 cut(s)	467, 499
BpmI	CTGGAG	2 cut(s)	275, 1149
BpuMI	CCSGG	4 cut(s)	279, 324, 414, 415
BsaI	GGTCTC	2 cut(s)	498, 1125
BsaJI	CCNNGG	2 cut(s)	277, 413
BsaWI	WCCGGW	2 cut(s)	306, 311
BsaXI	ACNNNNNCTCC	4 cut(s)	191, 221, 1122, 1152
Bsc4I	CCNNNNNNNGG	7 cut(s)	209, 329, 697, 712, 1141, 1296, 1525
Bse1I	ACTGG	4 cut(s)	216, 1047, 1774, 1810
Bse3DI	GCAATG	1 cut(s)	1692
BseBI	CCWGG	3 cut(s)	490, 531, 1070
BseDI	CCNNGG	2 cut(s)	277, 413
BseGI	GGATG	6 cut(s)	751, 806, 1053, 1394, 1534, 1806
BseLI	CCNNNNNNNGG	7 cut(s)	209, 329, 697, 712, 1141, 1296, 1525
BseMI	GCAATG	1 cut(s)	1692
BseMII	CTCAG	1 cut(s)	1517
BseNI	ACTGG	4 cut(s)	216, 1047, 1774, 1810
BseRI	GAGGAG	7 cut(s)	531, 539, 868, 973, 1259, 1349, 1352
BseXI	GCAGC	2 cut(s)	366, 421
BseYI	CCCAGC	1 cut(s)	1022
BsgI	GTGCAG	1 cut(s)	365
Bsh1236I	CGCG	4 cut(s)	91, 126, 582, 777
BshFI	GGCC	5 cut(s)	148, 213, 705, 1080, 1679
BsiHKCI	CYCGRG	1 cut(s)	413
BsiSI	CCGG	7 cut(s)	210, 279, 307, 312, 323, 414, 1616
BsiWI	CGTACG	1 cut(s)	121
BslFI	GGGAC	1 cut(s)	352
BslI	CCNNNNNNNGG	7 cut(s)	209, 329, 697, 712, 1141, 1296, 1525
BsmAI	GTCTC	2 cut(s)	498, 1125
BsmFI	GGGAC	1 cut(s)	352
BsmI	GAATGC	1 cut(s)	921
BsnI	GGCC	5 cut(s)	148, 213, 705, 1080, 1679
Bso31I	GGTCTC	2 cut(s)	498, 1125
BsoBI	CYCGRG	1 cut(s)	413
Bsp1286I	GDGCHC	1 cut(s)	978
BspACI	CCGC	7 cut(s)	19, 89, 126, 401, 486, 580, 835
BspANI	GGCC	5 cut(s)	148, 213, 705, 1080, 1679
BspCNI	CTCAG	1 cut(s)	1516
BspFNI	CGCG	4 cut(s)	91, 126, 582, 777
BspHI	TCATGA	1 cut(s)	561
BspLI	GGNNCC	6 cut(s)	214, 445, 528, 806, 1081, 1154
BspMAI	CTGCAG	1 cut(s)	914
BspPI	GGATC	5 cut(s)	417, 518, 1147, 1160, 1709
BspTI	CTTAAG	1 cut(s)	1157
BspTNI	GGTCTC	2 cut(s)	498, 1125
BsrBI	CCGCTC	1 cut(s)	835
BsrDI	GCAATG	1 cut(s)	1692
BsrI	ACTGG	4 cut(s)	216, 1047, 1774, 1810
BssECI	CCNNGG	2 cut(s)	277, 413
BssNAI	GTATAC	1 cut(s)	576
BssSI	CACGAG	1 cut(s)	1647
Bst1107I	GTATAC	1 cut(s)	576
Bst2BI	CACGAG	1 cut(s)	1647
Bst2UI	CCWGG	3 cut(s)	490, 531, 1070
Bst4CI	ACNGT	1 cut(s)	573
Bst6I	CTCTTC	2 cut(s)	47, 53
BstAFI	CTTAAG	1 cut(s)	1157
BstAPI	GCANNNNNTGC	1 cut(s)	1649
BstC8I	GCNNGC	4 cut(s)	86, 462, 586, 590
BstDEI	CTNAG	2 cut(s)	696, 1503
BstENI	CCTNNNNNAGG	1 cut(s)	695
BstF5I	GGATG	6 cut(s)	751, 806, 1053, 1394, 1534, 1806
BstFNI	CGCG	4 cut(s)	91, 126, 582, 777
BstH2I	RGCGCY	1 cut(s)	1060
BstHHI	GCGC	3 cut(s)	299, 584, 1059
BstMAI	GTCTC	2 cut(s)	498, 1125
BstMWI	GCNNNNNNNGC	2 cut(s)	932, 1649
BstNI	CCWGG	3 cut(s)	490, 531, 1070
BstNSI	RCATGY	1 cut(s)	592
BstSCI	CCNGG	7 cut(s)	277, 322, 412, 413, 488, 529, 1068
BstSFI	CTRYAG	2 cut(s)	910, 1665
BstUI	CGCG	4 cut(s)	91, 126, 582, 777
BstV1I	GCAGC	2 cut(s)	366, 421
BstV2I	GAAGAC	1 cut(s)	1581
BstX2I	RGATCY	3 cut(s)	1152, 1379, 1714
BstYI	RGATCY	3 cut(s)	1152, 1379, 1714
BstZ17I	GTATAC	1 cut(s)	576
BsuI	GTATCC	2 cut(s)	899, 1612
BsuRI	GGCC	5 cut(s)	148, 213, 705, 1080, 1679
BtgZI	GCGATG	2 cut(s)	229, 270
BtsCI	GGATG	6 cut(s)	751, 806, 1053, 1394, 1534, 1806
BtsIMutI	CAGTG	1 cut(s)	1040
Cac8I	GCNNGC	4 cut(s)	86, 462, 586, 590
CaiI	CAGNNNCTG	1 cut(s)	334
CciI	TCATGA	1 cut(s)	561
CfoI	GCGC	3 cut(s)	299, 584, 1059
Cfr13I	GGNCC	7 cut(s)	147, 212, 304, 309, 444, 1066, 1079
Cfr9I	CCCGGG	1 cut(s)	413
CpoI	CGGWCCG	1 cut(s)	309
CseI	GACGC	1 cut(s)	908
Csp6I	GTAC	6 cut(s)	122, 164, 338, 891, 1179, 1219
CspI	CGGWCCG	1 cut(s)	309
CviAII	CATG	6 cut(s)	111, 562, 589, 1232, 1417, 1480
CviQI	GTAC	6 cut(s)	122, 164, 338, 891, 1179, 1219
DdeI	CTNAG	2 cut(s)	696, 1503
Eam1104I	CTCTTC	2 cut(s)	47, 53
EarI	CTCTTC	2 cut(s)	47, 53
EciI	GGCGGA	2 cut(s)	416, 475
Eco147I	AGGCCT	1 cut(s)	705
Eco24I	GRGCYC	1 cut(s)	978
Eco31I	GGTCTC	2 cut(s)	498, 1125
Eco47I	GGWCC	4 cut(s)	304, 309, 444, 1066
Eco47III	AGCGCT	1 cut(s)	1058
Eco88I	CYCGRG	1 cut(s)	413
EcoNI	CCTNNNNNAGG	1 cut(s)	695
EcoO109I	RGGNCCY	1 cut(s)	1079
EcoRII	CCWGG	3 cut(s)	488, 529, 1068
EcoT22I	ATGCAT	2 cut(s)	1446, 1645
EcoT38I	GRGCYC	1 cut(s)	978
FaeI	CATG	6 cut(s)	114, 565, 592, 1235, 1420, 1483
FaqI	GGGAC	1 cut(s)	352
FatI	CATG	6 cut(s)	110, 561, 588, 1231, 1416, 1479
FauI	CCCGC	2 cut(s)	26, 587
FauNDI	CATATG	1 cut(s)	1624
FbaI	TGATCA	2 cut(s)	450, 558
FblI	GTMKAC	1 cut(s)	575
Fnu4HI	GCNGC	5 cut(s)	89, 127, 380, 410, 836
FokI	GGATG	6 cut(s)	738, 813, 1060, 1401, 1541, 1793
FriOI	GRGCYC	1 cut(s)	978
Fsp4HI	GCNGC	5 cut(s)	89, 127, 380, 410, 836
FspBI	CTAG	4 cut(s)	204, 873, 1146, 1383
GlaI	GCGC	3 cut(s)	298, 583, 1058
GluI	GCNGC	5 cut(s)	89, 127, 380, 410, 836
GsaI	CCCAGC	1 cut(s)	1026
GsuI	CTGGAG	2 cut(s)	275, 1149
HaeII	RGCGCY	1 cut(s)	1060
HaeIII	GGCC	5 cut(s)	148, 213, 705, 1080, 1679
HapII	CCGG	7 cut(s)	210, 279, 307, 312, 323, 414, 1616
HgaI	GACGC	1 cut(s)	908
HhaI	GCGC	3 cut(s)	299, 584, 1059
Hin1II	CATG	6 cut(s)	114, 565, 592, 1235, 1420, 1483
Hin6I	GCGC	3 cut(s)	297, 582, 1057
HinP1I	GCGC	3 cut(s)	297, 582, 1057
HpaII	CCGG	7 cut(s)	210, 279, 307, 312, 323, 414, 1616
HphI	GGTGA	5 cut(s)	28, 144, 216, 250, 958
Hpy166II	GTNNAC	2 cut(s)	576, 893
Hpy188III	TCNNGA	4 cut(s)	292, 562, 1281, 1764
Hpy8I	GTNNAC	2 cut(s)	576, 893
Hpy99I	CGWCG	2 cut(s)	164, 924
HpyAV	CCTTC	4 cut(s)	695, 896, 959, 1669
HpyCH4III	ACNGT	1 cut(s)	573
HpyCH4IV	ACGT	3 cut(s)	162, 551, 884
HpyF10VI	GCNNNNNNNGC	2 cut(s)	932, 1649
HpyF3I	CTNAG	2 cut(s)	696, 1503
HpySE526I	ACGT	3 cut(s)	162, 551, 884
Hsp92II	CATG	6 cut(s)	114, 565, 592, 1235, 1420, 1483
HspAI	GCGC	3 cut(s)	297, 582, 1057
Ksp22I	TGATCA	2 cut(s)	450, 558
LmnI	GCTCC	5 cut(s)	176, 212, 294, 526, 1054
Lsp1109I	GCAGC	2 cut(s)	366, 421
LweI	GCATC	4 cut(s)	760, 997, 1630, 1652
MaeI	CTAG	4 cut(s)	204, 873, 1146, 1383
MaeII	ACGT	3 cut(s)	162, 551, 884
MaeIII	GTNAC	1 cut(s)	880
MbiI	CCGCTC	1 cut(s)	835
MboII	GAAGA	9 cut(s)	34, 40, 65, 88, 1333, 1478, 1581, 1649, 1752
MfeI	CAATTG	1 cut(s)	936
MflI	RGATCY	3 cut(s)	1152, 1379, 1714
MhlI	GDGCHC	1 cut(s)	978
MlyI	GAGTC	2 cut(s)	476, 629
MmeI	TCCRAC	4 cut(s)	126, 663, 1217, 1333
Mph1103I	ATGCAT	2 cut(s)	1446, 1645
MseI	TTAA	3 cut(s)	1158, 1700, 1791
MspCI	CTTAAG	1 cut(s)	1157
MspI	CCGG	7 cut(s)	210, 279, 307, 312, 323, 414, 1616
MspR9I	CCNGG	7 cut(s)	279, 324, 414, 415, 490, 531, 1070
MunI	CAATTG	1 cut(s)	936
Mva1269I	GAATGC	1 cut(s)	921
MvaI	CCWGG	3 cut(s)	490, 531, 1070
MvnI	CGCG	4 cut(s)	91, 126, 582, 777
MwoI	GCNNNNNNNGC	2 cut(s)	932, 1649
NciI	CCSGG	4 cut(s)	279, 324, 414, 415
NdeI	CATATG	1 cut(s)	1624
NlaIII	CATG	6 cut(s)	114, 565, 592, 1235, 1420, 1483
NlaIV	GGNNCC	6 cut(s)	214, 445, 528, 806, 1081, 1154
NsiI	ATGCAT	2 cut(s)	1446, 1645
NspI	RCATGY	1 cut(s)	592
PaeI	GCATGC	1 cut(s)	592
PagI	TCATGA	1 cut(s)	561
PceI	AGGCCT	1 cut(s)	705
PcsI	WCGNNNNNNNCGW	3 cut(s)	88, 357, 548
PctI	GAATGC	1 cut(s)	921
Pfl23II	CGTACG	1 cut(s)	121
PflMI	CCANNNNNTGG	1 cut(s)	1525
PfoI	TCCNGGA	1 cut(s)	1068
PkrI	GCNGC	5 cut(s)	90, 128, 381, 411, 837
PleI	GAGTC	2 cut(s)	476, 629
PpsI	GAGTC	2 cut(s)	476, 629
PsiI	TTATAA	1 cut(s)	783
Psp6I	CCWGG	3 cut(s)	488, 529, 1068
PspFI	CCCAGC	1 cut(s)	1022
PspGI	CCWGG	3 cut(s)	488, 529, 1068
PspLI	CGTACG	1 cut(s)	121
PspN4I	GGNNCC	6 cut(s)	214, 445, 528, 806, 1081, 1154
PspPI	GGNCC	7 cut(s)	147, 212, 304, 309, 444, 1066, 1079
PstI	CTGCAG	1 cut(s)	914
PstNI	CAGNNNCTG	1 cut(s)	334
PsuI	RGATCY	3 cut(s)	1152, 1379, 1714
RsaI	GTAC	6 cut(s)	123, 165, 339, 892, 1180, 1220
RsaNI	GTAC	6 cut(s)	122, 164, 338, 891, 1179, 1219
Rsr2I	CGGWCCG	1 cut(s)	309
RsrII	CGGWCCG	1 cut(s)	309
SaqAI	TTAA	3 cut(s)	1158, 1700, 1791
SatI	GCNGC	5 cut(s)	89, 127, 380, 410, 836
Sau96I	GGNCC	7 cut(s)	147, 212, 304, 309, 444, 1066, 1079
SchI	GAGTC	2 cut(s)	476, 629
ScrFI	CCNGG	7 cut(s)	279, 324, 414, 415, 490, 531, 1070
SduI	GDGCHC	1 cut(s)	978
SfaNI	GCATC	4 cut(s)	760, 997, 1630, 1652
SfcI	CTRYAG	2 cut(s)	910, 1665
SinI	GGWCC	4 cut(s)	304, 309, 444, 1066
SmaI	CCCGGG	1 cut(s)	415
SmlI	CTYRAG	1 cut(s)	1157
SmoI	CTYRAG	1 cut(s)	1157
SphI	GCATGC	1 cut(s)	592
SseBI	AGGCCT	1 cut(s)	705
SsiI	CCGC	7 cut(s)	19, 89, 126, 401, 486, 580, 835
SspMI	CTAG	4 cut(s)	204, 873, 1146, 1383
StuI	AGGCCT	1 cut(s)	705
StyD4I	CCNGG	7 cut(s)	277, 322, 412, 413, 488, 529, 1068
TaaI	ACNGT	1 cut(s)	573
TaiI	ACGT	3 cut(s)	165, 554, 887
TaqI	TCGA	7 cut(s)	318, 351, 360, 421, 470, 480, 732
TauI	GCSGC	3 cut(s)	91, 129, 838
Tru1I	TTAA	3 cut(s)	1158, 1700, 1791
Tru9I	TTAA	3 cut(s)	1158, 1700, 1791
TscAI	CASTG	1 cut(s)	1047
TseI	GCWGC	2 cut(s)	379, 409
TspDTI	ATGAA	5 cut(s)	273, 1268, 1415, 1568, 1650
TspGWI	ACGGA	3 cut(s)	109, 436, 1501
TspMI	CCCGGG	1 cut(s)	413
TspRI	CASTG	1 cut(s)	1047
Van91I	CCANNNNNTGG	1 cut(s)	1525
Vha464I	CTTAAG	1 cut(s)	1157
VpaK11BI	GGWCC	4 cut(s)	304, 309, 444, 1066
XagI	CCTNNNNNAGG	1 cut(s)	695
XapI	RAATTY	1 cut(s)	1469
XceI	RCATGY	1 cut(s)	592
XmaI	CCCGGG	1 cut(s)	413
XmiI	GTMKAC	1 cut(s)	575
XspI	CTAG	4 cut(s)	204, 873, 1146, 1383
Zsp2I	ATGCAT	2 cut(s)	1446, 1645

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.