Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0016204

Physical Location & Seq

Genomic Coordinates Forward (+)

67002060 .. 67006983

Gene Structure 4924 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG519800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGCCCTCACAGAAACCCCGCCATTTTCTCTCTCTGGCCCTCCTCATCTTCTTCAAGCCAAACCTTAACCCTAACCCTAACTTTAACTTTCGTATTCTCTCTCTTCGATCCTTCTCCGACCAATCATGGCTGTCCGTACCCGGAAACCCCCTAATCAAGTGGCCCTCGCTCTCACCGCCTCCATCTCTCCCTTCCCCTTCCCCTAACCCTAATTTTGACCCCAAATTTTCACAAAATGACTTGTCCGCAATCGCTAACCTGCTCGCCGACCCACCCGGTCCATCGCTTCGGACCGCATTGGACCGGGCCGGAATTGACCCGAGTCCGAGTCTGCTACAGGCTGTGTTCGACCACTTTGATTCGTCTCCCAAATTGCTGCACACGCTGTTTGTTTGGGCTGAGAAGCAGCCCGGGTTTCGATGCTCTGCGACGCTCTTCACCTCCATGGTCAATGTGCTTGCCAAGGCTAGGGACTTTGAGTCTGCGTGGTCTATGATTCTTGATCGAATCGGCGGAGATAAGGAGCCTGGGTTGGTTTCTGTAGATGCATTTGTCATCATGATCAGACGGTATGCTCGTGCAGGTCAACCCCAATCAGCAATTCGAGCTTTTGAATTTGCAAGTACCTTAGAGTCATTTCTCAATTCTGAATCAGAAATGAGTTTGTTTGGAATCTTACTGGATTCCCTTTGTAAGGAGGGTCTTGTGAGGGTGGCCTCGGAATATTTTGATGGGAAAAGAAAGTTGCATCGAGATTGGATTCCATCGGTTCGGGTTTATAATATACTGTTGAATGGATGGTTTCGAGCGAGGAAGCTGAAGAAGGCAGAGCGGCTTTGGGTGGAGATGAAGAGAGACGGCGTGAAACCTAGTGTCGTGACATATGGTACACTTGTAGAAGGATACTGTCGGATGCGTCGTCCTGAAATCTCAATGGAGTTGGTGGGTGAGATGAGGAGGGAAGGAATTGAACCAAATGCGATTGTGTTTAATCCAATAATTGATGCTTTGGGGGAAGCCGGGAGGTTCAAGGAAGCGTGGGGGATGATGGAGCGGTTTTCAGTTCTGGAATCAGGCCCCAATATTTCGACGTACAATTCTCTGGTAAAGGGCTATTGCAAGGCCGGAAATCTTGTAGAAGCTAGTAGGATTATTAAGATGATGATAAGCAGGGGTATTGTACCAACTCCAACAACCTATAACTATTTCTTTAGGTTCTTTTCAAAGTCTGGGAAAATTGAGGAAGGAATGAACCTTTATACCAAAATGATTGAATCTGGGTATACCCCAGATCGTCTTACTTTCCATCTTCTGTTGAAGATGTTATGTGAAGAGGGAAGATTGGATTTGGCTGTTCAAGTTAGCAAGGAAATGAGAACTAGGGGATGTGATATGGATTTAGCCACGAGTACCATGTTGATTCATTTGCTCTGCAAGATGAATAAATTTAAAGAAGCTTTGTCAGAGTTTGAGGACATGATATGCAGGGGTTTAGTTCCGCAGTATCTAACTTTTCAGAACATGTATGATGAACTAAGGAAACAAGGAATGACTGAAATGGCACGAAAGCTGTGCGCCCTGATGTCTTCTGTTCCTCATTCAACAAAGTTGCCGAATACATATGTCAAAGATAGAGATGAATCTCATGCAAGGAGAAAATCTATAATTCAGAAGGCTGAAGCAATGTCTAATGTGTTGAAAACTTGTTCAGATCCAAGAGAACTTGTTAAGCACAGAAGTTCGCCGGAGACTGTTGAATCAAGAGCAAACCAGTTAATAGAGAATATTAAGACAAAAGCTAACATTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009787 GO:0009788 GO:0009791 GO:0009845 GO:0009966 GO:0009968 GO:0009987 GO:0010029 GO:0010646 GO:0010648 GO:0016070 GO:0016787 GO:0016788 GO:0023051 GO:0023057 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0065007 GO:0071704 GO:0090304 GO:0090305 GO:0090351 GO:0097159 GO:1900140 GO:1901360 GO:1901363 GO:1901419 GO:1901420 GO:1905957 GO:1905958 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

603

Amino Acids

68.41

Weight (kDa)

9.32

Isoelectric Point (pI)

47.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	255 - 304	3.5e-15	PPR repeat family
PPR_3	PF13812	255 - 299	2.4e-07	Pentatricopeptide repeat domain
PPR_3	PF13812	279 - 339	6.5e-13	Pentatricopeptide repeat domain
PPR_1	PF12854	286 - 319	4.7e-08	PPR repeat
PPR_2	PF13041	290 - 337	1.6e-09	PPR repeat family
PPR	PF01535	293 - 323	1e-05	PPR repeat
PPR_2	PF13041	360 - 407	4.7e-11	PPR repeat family
PPR_1	PF12854	360 - 388	1e-08	PPR repeat
PPR_3	PF13812	360 - 406	6e-07	Pentatricopeptide repeat domain
PPR	PF01535	363 - 393	2.9e-08	PPR repeat
PPR_2	PF13041	399 - 443	7.2e-08	PPR repeat family
PPR_2	PF13041	438 - 479	1.1e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016204)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11310
fragaria_vesca	FvH4_2g30070
malus_domestica	MD08G1137400.v1.1
prunus_persica	Prupe.1G467400_v2.0.a1
pyrus_communis	pycom08g11630
rosa_chinensis	RchiOBHm_Chr6g0312841
rosa_laevigata	RLG00000010293
rosa_multiflora	Rmu_sc0008049.1_g000008
rosa_roxburghii	Rroxscaffold_7G00156440
rosa_rugosa	Rorug06G0399900
rosa_samantha	Rh6AG517200 Rh6BG528600 Rh6CG533300 Rh6DG519800
rosa_wichuraiana	Rw6G044930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	780
Acc36I	ACCTGC	2 cut(s)	267, 572
AccBSI	CCGCTC	2 cut(s)	832, 1054
AccI	GTMKAC	1 cut(s)	1283
AciI	CCGC	8 cut(s)	19, 176, 246, 294, 513, 832, 1054, 1499
AclWI	GGATC	2 cut(s)	102, 1706
AcsI	RAATTY	3 cut(s)	224, 614, 1445
AcuI	CTGAAG	2 cut(s)	839, 1698
AfaI	GTAC	6 cut(s)	138, 625, 889, 1094, 1182, 1411
AfiI	CCNNNNNNNGG	2 cut(s)	468, 694
AflIII	ACRYGT	1 cut(s)	1521
AhdI	GACNNNNNGTC	1 cut(s)	478
AjnI	CCWGG	1 cut(s)	526
AjuI	GAANNNNNNNTTGG	2 cut(s)	585, 617
AluBI	AGCT	6 cut(s)	608, 817, 1142, 1457, 1570, 1799
AluI	AGCT	6 cut(s)	608, 817, 1142, 1457, 1570, 1799
Alw26I	GTCTC	3 cut(s)	369, 849, 1742
AlwI	GGATC	2 cut(s)	102, 1706
Ama87I	CYCGRG	2 cut(s)	319, 410
AoxI	GGCC	6 cut(s)	36, 161, 306, 714, 1075, 1122
ApeKI	GCWGC	2 cut(s)	376, 406
ApoI	RAATTY	3 cut(s)	224, 614, 1445
AspLEI	GCGC	1 cut(s)	1577
AspS9I	GGNCC	7 cut(s)	37, 162, 278, 291, 301, 306, 1076
AsuC2I	CCSGG	6 cut(s)	141, 276, 305, 411, 412, 1021
AsuHPI	GGTGA	3 cut(s)	165, 430, 959
AvaI	CYCGRG	2 cut(s)	319, 410
AvaII	GGWCC	3 cut(s)	278, 291, 301
BaeI	ACNNNNGTAYC	2 cut(s)	879, 912
BauI	CACGAG	2 cut(s)	576, 1405
BbsI	GAAGAC	1 cut(s)	1578
BbvI	GCAGC	2 cut(s)	363, 418
BccI	CCATC	7 cut(s)	190, 289, 725, 772, 792, 1042, 1314
BceAI	ACGGC	1 cut(s)	874
BcgI	CGANNNNNNTGC	2 cut(s)	1554, 1588
BciT130I	CCWGG	1 cut(s)	528
BciVI	GTATCC	1 cut(s)	896
BclI	TGATCA	1 cut(s)	561
BcnI	CCSGG	6 cut(s)	141, 276, 305, 411, 412, 1021
BcoDI	GTCTC	3 cut(s)	369, 849, 1742
BfaI	CTAG	4 cut(s)	468, 870, 1143, 1380
BfmI	CTRYAG	2 cut(s)	335, 540
BfuAI	ACCTGC	2 cut(s)	267, 572
BfuI	GTATCC	1 cut(s)	896
BisI	GCNGC	3 cut(s)	377, 407, 833
BlsI	GCNGC	3 cut(s)	378, 408, 834
Bme1390I	CCNGG	7 cut(s)	141, 276, 305, 411, 412, 528, 1021
Bme18I	GGWCC	3 cut(s)	278, 291, 301
BmeRI	GACNNNNNGTC	1 cut(s)	478
BmeT110I	CYCGRG	2 cut(s)	319, 410
BmgT120I	GGNCC	7 cut(s)	37, 162, 278, 291, 301, 306, 1076
BmiI	GGNNCC	2 cut(s)	525, 1078
BmrFI	CCNGG	7 cut(s)	141, 276, 305, 411, 412, 528, 1021
BmsI	GCATC	5 cut(s)	410, 535, 757, 903, 994
BoxI	GACNNNNGTC	1 cut(s)	321
BpiI	GAAGAC	1 cut(s)	1578
BpuMI	CCSGG	6 cut(s)	141, 276, 305, 411, 412, 1021
BsaJI	CCNNGG	5 cut(s)	410, 444, 462, 527, 717
BsaXI	ACNNNNNCTCC	2 cut(s)	515, 545
Bsc4I	CCNNNNNNNGG	2 cut(s)	468, 694
Bse1I	ACTGG	2 cut(s)	684, 1771
Bse3DI	GCAATG	1 cut(s)	1689
BseBI	CCWGG	1 cut(s)	528
BseDI	CCNNGG	5 cut(s)	410, 444, 462, 527, 717
BseGI	GGATG	4 cut(s)	803, 918, 1050, 1391
BseLI	CCNNNNNNNGG	2 cut(s)	468, 694
BseMI	GCAATG	1 cut(s)	1689
BseMII	CTCAG	1 cut(s)	390
BseNI	ACTGG	2 cut(s)	684, 1771
BseRI	GAGGAG	2 cut(s)	32, 970
BseXI	GCAGC	2 cut(s)	363, 418
BsgI	GTGCAG	2 cut(s)	362, 600
BshFI	GGCC	6 cut(s)	38, 163, 308, 716, 1077, 1124
BsiHKCI	CYCGRG	2 cut(s)	319, 410
BsiSI	CCGG	8 cut(s)	141, 276, 304, 309, 411, 1020, 1125, 1745
BslFI	GGGAC	1 cut(s)	485
BslI	CCNNNNNNNGG	2 cut(s)	468, 694
BsmAI	GTCTC	3 cut(s)	369, 849, 1742
BsmBI	CGTCTC	2 cut(s)	369, 849
BsmFI	GGGAC	1 cut(s)	485
BsnI	GGCC	6 cut(s)	38, 163, 308, 716, 1077, 1124
BsoBI	CYCGRG	2 cut(s)	319, 410
Bsp143I	GATC	5 cut(s)	107, 502, 561, 1291, 1711
Bsp19I	CCATGG	1 cut(s)	444
BspACI	CCGC	8 cut(s)	19, 176, 246, 294, 513, 832, 1054, 1499
BspANI	GGCC	6 cut(s)	38, 163, 308, 716, 1077, 1124
BspCNI	CTCAG	1 cut(s)	391
BspHI	TCATGA	1 cut(s)	558
BspLI	GGNNCC	2 cut(s)	525, 1078
BspMI	ACCTGC	2 cut(s)	267, 572
BspPI	GGATC	2 cut(s)	102, 1706
BspQI	GCTCTTC	1 cut(s)	440
BsrBI	CCGCTC	2 cut(s)	832, 1054
BsrDI	GCAATG	1 cut(s)	1689
BsrI	ACTGG	2 cut(s)	684, 1771
BssECI	CCNNGG	5 cut(s)	410, 444, 462, 527, 717
BssMI	GATC	5 cut(s)	107, 502, 561, 1291, 1711
BssNAI	GTATAC	1 cut(s)	1284
BssSI	CACGAG	2 cut(s)	576, 1405
BssT1I	CCWWGG	2 cut(s)	444, 462
Bst1107I	GTATAC	1 cut(s)	1284
Bst2BI	CACGAG	2 cut(s)	576, 1405
Bst2UI	CCWGG	1 cut(s)	528
Bst4CI	ACNGT	4 cut(s)	570, 789, 908, 1753
Bst6I	CTCTTC	4 cut(s)	108, 440, 845, 1326
BstC8I	GCNNGC	2 cut(s)	264, 459
BstDEI	CTNAG	3 cut(s)	399, 628, 1535
BstDSI	CCRYGG	1 cut(s)	444
BstENI	CCTNNNNNAGG	1 cut(s)	692
BstF5I	GGATG	4 cut(s)	803, 918, 1050, 1391
BstHHI	GCGC	1 cut(s)	1577
BstKTI	GATC	5 cut(s)	110, 505, 564, 1294, 1714
BstMAI	GTCTC	3 cut(s)	369, 849, 1742
BstMBI	GATC	5 cut(s)	107, 502, 561, 1291, 1711
BstMWI	GCNNNNNNNGC	3 cut(s)	175, 382, 605
BstNI	CCWGG	1 cut(s)	528
BstNSI	RCATGY	1 cut(s)	1525
BstPAI	GACNNNNGTC	1 cut(s)	321
BstSCI	CCNGG	7 cut(s)	139, 274, 303, 409, 410, 526, 1019
BstSFI	CTRYAG	2 cut(s)	335, 540
BstV1I	GCAGC	2 cut(s)	363, 418
BstV2I	GAAGAC	1 cut(s)	1578
BstX2I	RGATCY	1 cut(s)	1711
BstYI	RGATCY	1 cut(s)	1711
BstZ17I	GTATAC	1 cut(s)	1284
BsuI	GTATCC	1 cut(s)	896
BsuRI	GGCC	6 cut(s)	38, 163, 308, 716, 1077, 1124
BtgI	CCRYGG	1 cut(s)	444
BtgZI	GCGATG	1 cut(s)	267
BtsCI	GGATG	4 cut(s)	803, 918, 1050, 1391
BveI	ACCTGC	2 cut(s)	267, 572
Cac8I	GCNNGC	2 cut(s)	264, 459
CciI	TCATGA	1 cut(s)	558
CfoI	GCGC	1 cut(s)	1577
Cfr13I	GGNCC	7 cut(s)	37, 162, 278, 291, 301, 306, 1076
Cfr9I	CCCGGG	1 cut(s)	410
CpoI	CGGWCCG	1 cut(s)	291
CseI	GACGC	2 cut(s)	439, 905
Csp6I	GTAC	6 cut(s)	137, 624, 888, 1093, 1181, 1410
CspI	CGGWCCG	1 cut(s)	291
CviAII	CATG	7 cut(s)	126, 445, 559, 1414, 1477, 1522, 1646
CviQI	GTAC	6 cut(s)	137, 624, 888, 1093, 1181, 1410
DdeI	CTNAG	3 cut(s)	399, 628, 1535
DpnI	GATC	5 cut(s)	109, 504, 563, 1293, 1713
DpnII	GATC	5 cut(s)	107, 502, 561, 1291, 1711
DraI	TTTAAA	1 cut(s)	1450
DriI	GACNNNNNGTC	1 cut(s)	478
Eam1104I	CTCTTC	4 cut(s)	108, 440, 845, 1326
Eam1105I	GACNNNNNGTC	1 cut(s)	478
EarI	CTCTTC	4 cut(s)	108, 440, 845, 1326
EciI	GGCGGA	1 cut(s)	528
Eco130I	CCWWGG	2 cut(s)	444, 462
Eco47I	GGWCC	3 cut(s)	278, 291, 301
Eco57I	CTGAAG	2 cut(s)	839, 1698
Eco88I	CYCGRG	2 cut(s)	319, 410
EcoNI	CCTNNNNNAGG	1 cut(s)	692
EcoO109I	RGGNCCY	1 cut(s)	1076
EcoRII	CCWGG	1 cut(s)	526
EcoT14I	CCWWGG	2 cut(s)	444, 462
EcoT22I	ATGCAT	1 cut(s)	550
ErhI	CCWWGG	2 cut(s)	444, 462
Esp3I	CGTCTC	2 cut(s)	369, 849
FaeI	CATG	7 cut(s)	129, 448, 562, 1417, 1480, 1525, 1649
FaqI	GGGAC	1 cut(s)	485
FatI	CATG	7 cut(s)	125, 444, 558, 1413, 1476, 1521, 1645
FauI	CCCGC	1 cut(s)	26
FauNDI	CATATG	2 cut(s)	883, 1621
FbaI	TGATCA	1 cut(s)	561
FblI	GTMKAC	1 cut(s)	1283
Fnu4HI	GCNGC	3 cut(s)	377, 407, 833
FokI	GGATG	4 cut(s)	810, 925, 1057, 1398
Fsp4HI	GCNGC	3 cut(s)	377, 407, 833
FspBI	CTAG	4 cut(s)	468, 870, 1143, 1380
GlaI	GCGC	1 cut(s)	1576
GluI	GCNGC	3 cut(s)	377, 407, 833
HaeIII	GGCC	6 cut(s)	38, 163, 308, 716, 1077, 1124
HapII	CCGG	8 cut(s)	141, 276, 304, 309, 411, 1020, 1125, 1745
HgaI	GACGC	2 cut(s)	439, 905
HhaI	GCGC	1 cut(s)	1577
Hin1II	CATG	7 cut(s)	129, 448, 562, 1417, 1480, 1525, 1649
Hin6I	GCGC	1 cut(s)	1575
HinP1I	GCGC	1 cut(s)	1575
HincII	GTYRAC	1 cut(s)	587
HindII	GTYRAC	1 cut(s)	587
HindIII	AAGCTT	1 cut(s)	1455
HpaII	CCGG	8 cut(s)	141, 276, 304, 309, 411, 1020, 1125, 1745
HphI	GGTGA	3 cut(s)	165, 430, 959
Hpy166II	GTNNAC	3 cut(s)	587, 890, 1284
Hpy188III	TCNNGA	7 cut(s)	500, 559, 752, 877, 923, 1067, 1761
Hpy8I	GTNNAC	3 cut(s)	587, 890, 1284
Hpy99I	CGWCG	3 cut(s)	433, 921, 1093
HpyAV	CCTTC	8 cut(s)	121, 201, 207, 817, 893, 956, 1238, 1666
HpyCH4III	ACNGT	4 cut(s)	570, 789, 908, 1753
HpyCH4IV	ACGT	1 cut(s)	1091
HpyCH4V	TGCA	9 cut(s)	379, 548, 581, 620, 748, 1119, 1434, 1485, 1649
HpyF10VI	GCNNNNNNNGC	3 cut(s)	175, 382, 605
HpyF3I	CTNAG	3 cut(s)	399, 628, 1535
HpySE526I	ACGT	1 cut(s)	1091
Hsp92II	CATG	7 cut(s)	129, 448, 562, 1417, 1480, 1525, 1649
HspAI	GCGC	1 cut(s)	1575
Ksp22I	TGATCA	1 cut(s)	561
Kzo9I	GATC	5 cut(s)	107, 502, 561, 1291, 1711
LguI	GCTCTTC	1 cut(s)	440
LmnI	GCTCC	2 cut(s)	523, 1051
Lsp1109I	GCAGC	2 cut(s)	363, 418
LweI	GCATC	5 cut(s)	410, 535, 757, 903, 994
MaeI	CTAG	4 cut(s)	468, 870, 1143, 1380
MaeII	ACGT	1 cut(s)	1091
MaeIII	GTNAC	1 cut(s)	877
MalI	GATC	5 cut(s)	109, 504, 563, 1293, 1713
MbiI	CCGCTC	2 cut(s)	832, 1054
MboI	GATC	5 cut(s)	107, 502, 561, 1291, 1711
MflI	RGATCY	1 cut(s)	1711
MlyI	GAGTC	4 cut(s)	331, 337, 488, 641
MmeI	TCCRAC	3 cut(s)	141, 890, 1214
Mph1103I	ATGCAT	1 cut(s)	550
MseI	TTAA	9 cut(s)	66, 84, 990, 1155, 1449, 1728, 1775, 1788, 1806
MslI	CAYNNNNRTG	1 cut(s)	443
MspI	CCGG	8 cut(s)	141, 276, 304, 309, 411, 1020, 1125, 1745
MspR9I	CCNGG	7 cut(s)	141, 276, 305, 411, 412, 528, 1021
MvaI	CCWGG	1 cut(s)	528
MwoI	GCNNNNNNNGC	3 cut(s)	175, 382, 605
NciI	CCSGG	6 cut(s)	141, 276, 305, 411, 412, 1021
NcoI	CCATGG	1 cut(s)	444
NdeI	CATATG	2 cut(s)	883, 1621
NdeII	GATC	5 cut(s)	107, 502, 561, 1291, 1711
NlaIII	CATG	7 cut(s)	129, 448, 562, 1417, 1480, 1525, 1649
NlaIV	GGNNCC	2 cut(s)	525, 1078
NmuCI	GTSAC	1 cut(s)	877
NsiI	ATGCAT	1 cut(s)	550
NspI	RCATGY	1 cut(s)	1525
PagI	TCATGA	1 cut(s)	558
PciI	ACATGT	1 cut(s)	1521
PciSI	GCTCTTC	1 cut(s)	440
PcsI	WCGNNNNNNNCGW	2 cut(s)	574, 916
PkrI	GCNGC	3 cut(s)	378, 408, 834
PleI	GAGTC	4 cut(s)	330, 336, 487, 640
PpsI	GAGTC	4 cut(s)	330, 336, 487, 640
PscI	ACATGT	1 cut(s)	1521
PshAI	GACNNNNGTC	1 cut(s)	321
PsiI	TTATAA	1 cut(s)	780
Psp6I	CCWGG	1 cut(s)	526
PspGI	CCWGG	1 cut(s)	526
PspN4I	GGNNCC	2 cut(s)	525, 1078
PspPI	GGNCC	7 cut(s)	37, 162, 278, 291, 301, 306, 1076
PsuI	RGATCY	1 cut(s)	1711
RsaI	GTAC	6 cut(s)	138, 625, 889, 1094, 1182, 1411
RsaNI	GTAC	6 cut(s)	137, 624, 888, 1093, 1181, 1410
RseI	CAYNNNNRTG	1 cut(s)	443
Rsr2I	CGGWCCG	1 cut(s)	291
RsrII	CGGWCCG	1 cut(s)	291
SapI	GCTCTTC	1 cut(s)	440
SaqAI	TTAA	9 cut(s)	66, 84, 990, 1155, 1449, 1728, 1775, 1788, 1806
SatI	GCNGC	3 cut(s)	377, 407, 833
Sau3AI	GATC	5 cut(s)	107, 502, 561, 1291, 1711
Sau96I	GGNCC	7 cut(s)	37, 162, 278, 291, 301, 306, 1076
SchI	GAGTC	4 cut(s)	331, 337, 488, 641
ScrFI	CCNGG	7 cut(s)	141, 276, 305, 411, 412, 528, 1021
SfaNI	GCATC	5 cut(s)	410, 535, 757, 903, 994
SfcI	CTRYAG	2 cut(s)	335, 540
SinI	GGWCC	3 cut(s)	278, 291, 301
SmaI	CCCGGG	1 cut(s)	412
SmiMI	CAYNNNNRTG	1 cut(s)	443
SsiI	CCGC	8 cut(s)	19, 176, 246, 294, 513, 832, 1054, 1499
SspI	AATATT	3 cut(s)	725, 1084, 1786
SspMI	CTAG	4 cut(s)	468, 870, 1143, 1380
StyD4I	CCNGG	7 cut(s)	139, 274, 303, 409, 410, 526, 1019
StyI	CCWWGG	2 cut(s)	444, 462
TaaI	ACNGT	4 cut(s)	570, 789, 908, 1753
TaiI	ACGT	1 cut(s)	1094
TaqI	TCGA	8 cut(s)	106, 348, 418, 505, 604, 751, 805, 1088
TauI	GCSGC	1 cut(s)	835
Tru1I	TTAA	9 cut(s)	66, 84, 990, 1155, 1449, 1728, 1775, 1788, 1806
Tru9I	TTAA	9 cut(s)	66, 84, 990, 1155, 1449, 1728, 1775, 1788, 1806
TseFI	GTSAC	1 cut(s)	877
TseI	GCWGC	2 cut(s)	376, 406
Tsp45I	GTSAC	1 cut(s)	877
TspDTI	ATGAA	6 cut(s)	863, 1265, 1412, 1454, 1545, 1653
TspGWI	ACGGA	1 cut(s)	124
TspMI	CCCGGG	1 cut(s)	410
VpaK11BI	GGWCC	3 cut(s)	278, 291, 301
XagI	CCTNNNNNAGG	1 cut(s)	692
XapI	RAATTY	3 cut(s)	224, 614, 1445
XceI	RCATGY	1 cut(s)	1525
XmaI	CCCGGG	1 cut(s)	410
XmiI	GTMKAC	1 cut(s)	1283
XspI	CTAG	4 cut(s)	468, 870, 1143, 1380
Zsp2I	ATGCAT	1 cut(s)	550

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.