Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0016204

Physical Location & Seq

Genomic Coordinates Forward (+)

69383258 .. 69386479

Gene Structure 3222 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ28145

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGCCCTCATCACAGAAACCCCGCCATTTTCTCTCTCTGGCCCTCATCTTCTTCTTCAAGCCAAACCCAAACCCTAACCCTAACTTTCGTATTCTCTCTCTTCGATCCTTCTCCGACCAATCATGGCTGTCCGTACCCGGAAACCCCCTAATCAAGTGGCCCTCGCTCTCACCGCCTCCATCTCTCCCTTCCCCTAACCCTAATTTTGACCCCAAATTTTCACAAAATGACTTGTCCGCAATCGCTAACCTGCTCGCCGACCCATCGCTTCGGACCGCATTGGACCGGGCCGGAATTGACCCGAGTCCGAGTCTGCTACAGGCTGTGTTCGACCACTTTGATTCGTCTCCCAAATTGCTGCACACGCTGTTTGTTTGGGCTGAGAAGCAGCCCGGGTTTCGATGCTCTGCGACGCTCTTCACCTCCATGATCAATGTGCTTGCCAAGGCTAGAGACTTTGAGTCTGCGTGGTCTATGATTCTTGATCGAATCGGTGGAGATAAGGAGCCTGGGTTGGTTTCTGTAGATGCATTTGTCATCATGATCAGACGGTATGCTCGTGCAGGTCAACCCCAATCAGCAATTCGAGCTTTTGAATTTGCATGTACCTTAGAGTCATTTCTCAATTCTGAATCAGAAATGAGTTTGTTTGAAATCTTACTGGATTCCCTTTGTAAGGAGGGTCTTGTGAGGGTGGCCTCGGAATATTTTGATGGGAAAAGAAAGTTGCATCGACATTGGATTCCATCGGTTCGGGTTTATAATATACTGTTGAATGGATGGTTTCGAGCGAGGAAGCTGAAGAAGGCAGAGCGGCTTTGGGTGGAGATGAAGAGAGACGGCGTGAAACCTAGTGTCGTGACATATGGTACACTTGTAGAAGGATACTGTCGGATGCGTCGTCCTGAAATCTCAATGGAGTTGGTGGGTGAGATGAGGAGGGAAGGAATTGAACCAAATGCGATTGTGTTTAATCCAATAATTGATGCTTTGGGGGAAGCTGGGAGGTTCAAGGAAGCGTGGGGGATGATGGAGTGGTTTTCAGTTCTGGAATCAGGCCCCACTATTTCGACGTACAATTCTCTGGTAAAGGGCTATTGCAAGGCCGGAAATCTTGTAGAAGCTAGTAGGATTATTAAGATGATGATAAGCAGGGGTATTGTACCAACTCCAACAACCTATAACTATTTCTTTAGGTTCTTTTCAAAGTCTGGGAAAATTGAGGAAGGAATGAACCTTTATACCAAAATGATTGAATCTGGGTATACCCCAGATCGTCTTACTTTCCATCTTCTGTTGAAGATGTTATGTGAAGAGGGAAGATTGGATTTGGCTGTTCAAGTTAGCAAGGAAATGAGAACTAGGGGATGTGATATGGATTTAGCCACGAGTACCATGTTGATTCATTTGCTCTGCAAGATGAATAAATTTAAAGAAGCTTTGTCAGAGTTTGAGGACATGATACGCAGGGGTTTAGTTCCGCAGTATCTAACTTTTCAGAACATGTATGATGAACTAAGGAAACAAGGAATGACTGAAATGGCACGAAAGCTGTGCGCCCTTATGTCTTCTGTTCCTCATTCAACAAAGTTGCCGAATACATATGTCAAAGATAGAGATGAATCTCATGCAAGGAGAAAATCCATAATTCAGAAGGCTGAAGCAATGTCTAATGTGTTGAAAACTTGTTCAGATCCAAGAGAACTTGTTAAGCACAGAAGTTCGCCGGAGACTGTTGAATCAAGAGCAAACCAGTTAATAGAGAATATTAAGACAAAAGCTAACATTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009787 GO:0009788 GO:0009791 GO:0009845 GO:0009966 GO:0009968 GO:0009987 GO:0010029 GO:0010646 GO:0010648 GO:0016070 GO:0016787 GO:0016788 GO:0023051 GO:0023057 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0065007 GO:0071704 GO:0090304 GO:0090305 GO:0090351 GO:0097159 GO:1900140 GO:1901360 GO:1901363 GO:1901419 GO:1901420 GO:1905957 GO:1905958 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

597

Amino Acids

68.01

Weight (kDa)

9.32

Isoelectric Point (pI)

48.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	249 - 298	3.4e-15	PPR repeat family
PPR_3	PF13812	249 - 292	5.2e-07	Pentatricopeptide repeat domain
PPR_3	PF13812	273 - 333	6.4e-13	Pentatricopeptide repeat domain
PPR_1	PF12854	280 - 313	4.7e-08	PPR repeat
PPR_2	PF13041	284 - 324	5.2e-08	PPR repeat family
PPR	PF01535	287 - 317	9.8e-06	PPR repeat
PPR_2	PF13041	354 - 401	1.8e-10	PPR repeat family
PPR_1	PF12854	354 - 382	4.4e-08	PPR repeat
PPR_3	PF13812	356 - 400	5.3e-06	Pentatricopeptide repeat domain
PPR	PF01535	357 - 387	2.9e-08	PPR repeat
PPR_2	PF13041	393 - 437	7.1e-08	PPR repeat family
PPR_2	PF13041	429 - 473	5.6e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0016204)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G11310
fragaria_vesca	FvH4_2g30070
malus_domestica	MD08G1137400.v1.1
prunus_persica	Prupe.1G467400_v2.0.a1
pyrus_communis	pycom08g11630
rosa_chinensis	RchiOBHm_Chr6g0312841
rosa_laevigata	RLG00000010293
rosa_multiflora	Rmu_sc0008049.1_g000008
rosa_roxburghii	Rroxscaffold_7G00156440
rosa_rugosa	Rorug06G0399900
rosa_samantha	Rh6AG517200 Rh6BG528600 Rh6CG533300 Rh6DG519800
rosa_wichuraiana	Rw6G044930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	762
Acc36I	ACCTGC	2 cut(s)	258, 554
AccBSI	CCGCTC	1 cut(s)	814
AccI	GTMKAC	1 cut(s)	1265
AciI	CCGC	6 cut(s)	22, 173, 237, 276, 814, 1481
AclWI	GGATC	2 cut(s)	99, 1688
AcsI	RAATTY	3 cut(s)	215, 596, 1427
AcuI	CTGAAG	2 cut(s)	821, 1680
AfaI	GTAC	6 cut(s)	135, 607, 871, 1076, 1164, 1393
AfiI	CCNNNNNNNGG	1 cut(s)	676
AflIII	ACRYGT	1 cut(s)	1503
AhdI	GACNNNNNGTC	1 cut(s)	460
AjnI	CCWGG	1 cut(s)	508
AjuI	GAANNNNNNNTTGG	2 cut(s)	567, 599
AluBI	AGCT	7 cut(s)	590, 799, 1001, 1124, 1439, 1552, 1781
AluI	AGCT	7 cut(s)	590, 799, 1001, 1124, 1439, 1552, 1781
Alw26I	GTCTC	4 cut(s)	351, 447, 831, 1724
AlwI	GGATC	2 cut(s)	99, 1688
Ama87I	CYCGRG	2 cut(s)	301, 392
AoxI	GGCC	6 cut(s)	39, 158, 288, 696, 1057, 1104
ApeKI	GCWGC	2 cut(s)	358, 388
ApoI	RAATTY	3 cut(s)	215, 596, 1427
AspLEI	GCGC	1 cut(s)	1559
AspS9I	GGNCC	6 cut(s)	40, 159, 273, 283, 288, 1058
AsuC2I	CCSGG	4 cut(s)	138, 287, 393, 394
AsuHPI	GGTGA	3 cut(s)	162, 412, 941
AvaI	CYCGRG	2 cut(s)	301, 392
AvaII	GGWCC	2 cut(s)	273, 283
BaeI	ACNNNNGTAYC	2 cut(s)	861, 894
BauI	CACGAG	2 cut(s)	558, 1387
BbsI	GAAGAC	1 cut(s)	1560
BbvI	GCAGC	2 cut(s)	345, 400
BccI	CCATC	7 cut(s)	187, 271, 707, 754, 774, 1024, 1296
BceAI	ACGGC	1 cut(s)	856
BcgI	CGANNNNNNTGC	2 cut(s)	1536, 1570
BciT130I	CCWGG	1 cut(s)	510
BciVI	GTATCC	1 cut(s)	878
BclI	TGATCA	2 cut(s)	429, 543
BcnI	CCSGG	4 cut(s)	138, 287, 393, 394
BcoDI	GTCTC	4 cut(s)	351, 447, 831, 1724
BfaI	CTAG	4 cut(s)	450, 852, 1125, 1362
BfmI	CTRYAG	2 cut(s)	317, 522
BfuAI	ACCTGC	2 cut(s)	258, 554
BfuI	GTATCC	1 cut(s)	878
BisI	GCNGC	3 cut(s)	359, 389, 815
BlsI	GCNGC	3 cut(s)	360, 390, 816
Bme1390I	CCNGG	5 cut(s)	138, 287, 393, 394, 510
Bme18I	GGWCC	2 cut(s)	273, 283
BmeRI	GACNNNNNGTC	1 cut(s)	460
BmeT110I	CYCGRG	2 cut(s)	301, 392
BmgT120I	GGNCC	6 cut(s)	40, 159, 273, 283, 288, 1058
BmiI	GGNNCC	2 cut(s)	507, 1060
BmrFI	CCNGG	5 cut(s)	138, 287, 393, 394, 510
BmsI	GCATC	5 cut(s)	392, 517, 739, 885, 976
BoxI	GACNNNNGTC	1 cut(s)	303
BpiI	GAAGAC	1 cut(s)	1560
BpuMI	CCSGG	4 cut(s)	138, 287, 393, 394
BsaJI	CCNNGG	4 cut(s)	392, 444, 509, 699
BsaXI	ACNNNNNCTCC	2 cut(s)	497, 527
Bsc4I	CCNNNNNNNGG	1 cut(s)	676
Bse1I	ACTGG	2 cut(s)	666, 1753
Bse3DI	GCAATG	1 cut(s)	1671
BseBI	CCWGG	1 cut(s)	510
BseDI	CCNNGG	4 cut(s)	392, 444, 509, 699
BseGI	GGATG	4 cut(s)	785, 900, 1032, 1373
BseLI	CCNNNNNNNGG	1 cut(s)	676
BseMI	GCAATG	1 cut(s)	1671
BseMII	CTCAG	1 cut(s)	372
BseNI	ACTGG	2 cut(s)	666, 1753
BseRI	GAGGAG	1 cut(s)	952
BseXI	GCAGC	2 cut(s)	345, 400
BseYI	CCCAGC	1 cut(s)	1001
BsgI	GTGCAG	2 cut(s)	344, 582
BshFI	GGCC	6 cut(s)	41, 160, 290, 698, 1059, 1106
BsiHKCI	CYCGRG	2 cut(s)	301, 392
BsiSI	CCGG	6 cut(s)	138, 286, 291, 393, 1107, 1727
BslI	CCNNNNNNNGG	1 cut(s)	676
BsmAI	GTCTC	4 cut(s)	351, 447, 831, 1724
BsmBI	CGTCTC	2 cut(s)	351, 831
BsnI	GGCC	6 cut(s)	41, 160, 290, 698, 1059, 1106
BsoBI	CYCGRG	2 cut(s)	301, 392
Bsp143I	GATC	6 cut(s)	104, 429, 484, 543, 1273, 1693
BspACI	CCGC	6 cut(s)	22, 173, 237, 276, 814, 1481
BspANI	GGCC	6 cut(s)	41, 160, 290, 698, 1059, 1106
BspCNI	CTCAG	1 cut(s)	373
BspHI	TCATGA	1 cut(s)	540
BspLI	GGNNCC	2 cut(s)	507, 1060
BspMI	ACCTGC	2 cut(s)	258, 554
BspPI	GGATC	2 cut(s)	99, 1688
BspQI	GCTCTTC	1 cut(s)	422
BsrBI	CCGCTC	1 cut(s)	814
BsrDI	GCAATG	1 cut(s)	1671
BsrI	ACTGG	2 cut(s)	666, 1753
BssECI	CCNNGG	4 cut(s)	392, 444, 509, 699
BssMI	GATC	6 cut(s)	104, 429, 484, 543, 1273, 1693
BssNAI	GTATAC	1 cut(s)	1266
BssSI	CACGAG	2 cut(s)	558, 1387
BssT1I	CCWWGG	1 cut(s)	444
Bst1107I	GTATAC	1 cut(s)	1266
Bst2BI	CACGAG	2 cut(s)	558, 1387
Bst2UI	CCWGG	1 cut(s)	510
Bst4CI	ACNGT	4 cut(s)	552, 771, 890, 1735
Bst6I	CTCTTC	4 cut(s)	105, 422, 827, 1308
BstC8I	GCNNGC	2 cut(s)	255, 441
BstDEI	CTNAG	3 cut(s)	381, 610, 1517
BstENI	CCTNNNNNAGG	1 cut(s)	674
BstF5I	GGATG	4 cut(s)	785, 900, 1032, 1373
BstHHI	GCGC	1 cut(s)	1559
BstKTI	GATC	6 cut(s)	107, 432, 487, 546, 1276, 1696
BstMAI	GTCTC	4 cut(s)	351, 447, 831, 1724
BstMBI	GATC	6 cut(s)	104, 429, 484, 543, 1273, 1693
BstMWI	GCNNNNNNNGC	3 cut(s)	172, 364, 587
BstNI	CCWGG	1 cut(s)	510
BstNSI	RCATGY	2 cut(s)	606, 1507
BstPAI	GACNNNNGTC	1 cut(s)	303
BstSCI	CCNGG	5 cut(s)	136, 285, 391, 392, 508
BstSFI	CTRYAG	2 cut(s)	317, 522
BstV1I	GCAGC	2 cut(s)	345, 400
BstV2I	GAAGAC	1 cut(s)	1560
BstX2I	RGATCY	1 cut(s)	1693
BstYI	RGATCY	1 cut(s)	1693
BstZ17I	GTATAC	1 cut(s)	1266
BsuI	GTATCC	1 cut(s)	878
BsuRI	GGCC	6 cut(s)	41, 160, 290, 698, 1059, 1106
BtgZI	GCGATG	1 cut(s)	249
BtsCI	GGATG	4 cut(s)	785, 900, 1032, 1373
BveI	ACCTGC	2 cut(s)	258, 554
Cac8I	GCNNGC	2 cut(s)	255, 441
CciI	TCATGA	1 cut(s)	540
CfoI	GCGC	1 cut(s)	1559
Cfr13I	GGNCC	6 cut(s)	40, 159, 273, 283, 288, 1058
Cfr9I	CCCGGG	1 cut(s)	392
CpoI	CGGWCCG	1 cut(s)	273
CseI	GACGC	2 cut(s)	421, 887
Csp6I	GTAC	6 cut(s)	134, 606, 870, 1075, 1163, 1392
CspI	CGGWCCG	1 cut(s)	273
CviAII	CATG	8 cut(s)	123, 427, 541, 603, 1396, 1459, 1504, 1628
CviQI	GTAC	6 cut(s)	134, 606, 870, 1075, 1163, 1392
DdeI	CTNAG	3 cut(s)	381, 610, 1517
DpnI	GATC	6 cut(s)	106, 431, 486, 545, 1275, 1695
DpnII	GATC	6 cut(s)	104, 429, 484, 543, 1273, 1693
DraI	TTTAAA	1 cut(s)	1432
DriI	GACNNNNNGTC	1 cut(s)	460
Eam1104I	CTCTTC	4 cut(s)	105, 422, 827, 1308
Eam1105I	GACNNNNNGTC	1 cut(s)	460
EarI	CTCTTC	4 cut(s)	105, 422, 827, 1308
Eco130I	CCWWGG	1 cut(s)	444
Eco47I	GGWCC	2 cut(s)	273, 283
Eco57I	CTGAAG	2 cut(s)	821, 1680
Eco88I	CYCGRG	2 cut(s)	301, 392
EcoNI	CCTNNNNNAGG	1 cut(s)	674
EcoO109I	RGGNCCY	1 cut(s)	1058
EcoRII	CCWGG	1 cut(s)	508
EcoT14I	CCWWGG	1 cut(s)	444
EcoT22I	ATGCAT	1 cut(s)	532
ErhI	CCWWGG	1 cut(s)	444
Esp3I	CGTCTC	2 cut(s)	351, 831
FaeI	CATG	8 cut(s)	126, 430, 544, 606, 1399, 1462, 1507, 1631
FatI	CATG	8 cut(s)	122, 426, 540, 602, 1395, 1458, 1503, 1627
FauI	CCCGC	1 cut(s)	29
FauNDI	CATATG	2 cut(s)	865, 1603
FbaI	TGATCA	2 cut(s)	429, 543
FblI	GTMKAC	1 cut(s)	1265
Fnu4HI	GCNGC	3 cut(s)	359, 389, 815
FokI	GGATG	4 cut(s)	792, 907, 1039, 1380
Fsp4HI	GCNGC	3 cut(s)	359, 389, 815
FspBI	CTAG	4 cut(s)	450, 852, 1125, 1362
GlaI	GCGC	1 cut(s)	1558
GluI	GCNGC	3 cut(s)	359, 389, 815
GsaI	CCCAGC	1 cut(s)	1005
HaeIII	GGCC	6 cut(s)	41, 160, 290, 698, 1059, 1106
HapII	CCGG	6 cut(s)	138, 286, 291, 393, 1107, 1727
HgaI	GACGC	2 cut(s)	421, 887
HhaI	GCGC	1 cut(s)	1559
Hin1II	CATG	8 cut(s)	126, 430, 544, 606, 1399, 1462, 1507, 1631
Hin6I	GCGC	1 cut(s)	1557
HinP1I	GCGC	1 cut(s)	1557
HincII	GTYRAC	1 cut(s)	569
HindII	GTYRAC	1 cut(s)	569
HindIII	AAGCTT	1 cut(s)	1437
HpaII	CCGG	6 cut(s)	138, 286, 291, 393, 1107, 1727
HphI	GGTGA	3 cut(s)	162, 412, 941
Hpy166II	GTNNAC	3 cut(s)	569, 872, 1266
Hpy188III	TCNNGA	6 cut(s)	482, 541, 859, 905, 1049, 1743
Hpy8I	GTNNAC	3 cut(s)	569, 872, 1266
Hpy99I	CGWCG	3 cut(s)	415, 903, 1075
HpyAV	CCTTC	7 cut(s)	118, 198, 799, 875, 938, 1220, 1648
HpyCH4III	ACNGT	4 cut(s)	552, 771, 890, 1735
HpyCH4IV	ACGT	1 cut(s)	1073
HpyCH4V	TGCA	8 cut(s)	361, 530, 563, 602, 730, 1101, 1416, 1631
HpyF10VI	GCNNNNNNNGC	3 cut(s)	172, 364, 587
HpyF3I	CTNAG	3 cut(s)	381, 610, 1517
HpySE526I	ACGT	1 cut(s)	1073
Hsp92II	CATG	8 cut(s)	126, 430, 544, 606, 1399, 1462, 1507, 1631
HspAI	GCGC	1 cut(s)	1557
Ksp22I	TGATCA	2 cut(s)	429, 543
Kzo9I	GATC	6 cut(s)	104, 429, 484, 543, 1273, 1693
LguI	GCTCTTC	1 cut(s)	422
LmnI	GCTCC	1 cut(s)	505
Lsp1109I	GCAGC	2 cut(s)	345, 400
LweI	GCATC	5 cut(s)	392, 517, 739, 885, 976
MaeI	CTAG	4 cut(s)	450, 852, 1125, 1362
MaeII	ACGT	1 cut(s)	1073
MaeIII	GTNAC	1 cut(s)	859
MalI	GATC	6 cut(s)	106, 431, 486, 545, 1275, 1695
MbiI	CCGCTC	1 cut(s)	814
MboI	GATC	6 cut(s)	104, 429, 484, 543, 1273, 1693
MflI	RGATCY	1 cut(s)	1693
MlyI	GAGTC	4 cut(s)	313, 319, 470, 623
MmeI	TCCRAC	3 cut(s)	138, 872, 1196
Mph1103I	ATGCAT	1 cut(s)	532
MseI	TTAA	7 cut(s)	972, 1137, 1431, 1710, 1757, 1770, 1788
MslI	CAYNNNNRTG	1 cut(s)	425
MspI	CCGG	6 cut(s)	138, 286, 291, 393, 1107, 1727
MspR9I	CCNGG	5 cut(s)	138, 287, 393, 394, 510
MvaI	CCWGG	1 cut(s)	510
MwoI	GCNNNNNNNGC	3 cut(s)	172, 364, 587
NciI	CCSGG	4 cut(s)	138, 287, 393, 394
NdeI	CATATG	2 cut(s)	865, 1603
NdeII	GATC	6 cut(s)	104, 429, 484, 543, 1273, 1693
NlaIII	CATG	8 cut(s)	126, 430, 544, 606, 1399, 1462, 1507, 1631
NlaIV	GGNNCC	2 cut(s)	507, 1060
NmuCI	GTSAC	1 cut(s)	859
NsiI	ATGCAT	1 cut(s)	532
NspI	RCATGY	2 cut(s)	606, 1507
PagI	TCATGA	1 cut(s)	540
PciI	ACATGT	1 cut(s)	1503
PciSI	GCTCTTC	1 cut(s)	422
PcsI	WCGNNNNNNNCGW	2 cut(s)	556, 898
PkrI	GCNGC	3 cut(s)	360, 390, 816
PleI	GAGTC	4 cut(s)	312, 318, 469, 622
PpsI	GAGTC	4 cut(s)	312, 318, 469, 622
PscI	ACATGT	1 cut(s)	1503
PshAI	GACNNNNGTC	1 cut(s)	303
PsiI	TTATAA	1 cut(s)	762
Psp6I	CCWGG	1 cut(s)	508
PspFI	CCCAGC	1 cut(s)	1001
PspGI	CCWGG	1 cut(s)	508
PspN4I	GGNNCC	2 cut(s)	507, 1060
PspPI	GGNCC	6 cut(s)	40, 159, 273, 283, 288, 1058
PsuI	RGATCY	1 cut(s)	1693
RsaI	GTAC	6 cut(s)	135, 607, 871, 1076, 1164, 1393
RsaNI	GTAC	6 cut(s)	134, 606, 870, 1075, 1163, 1392
RseI	CAYNNNNRTG	1 cut(s)	425
Rsr2I	CGGWCCG	1 cut(s)	273
RsrII	CGGWCCG	1 cut(s)	273
SapI	GCTCTTC	1 cut(s)	422
SaqAI	TTAA	7 cut(s)	972, 1137, 1431, 1710, 1757, 1770, 1788
SatI	GCNGC	3 cut(s)	359, 389, 815
Sau3AI	GATC	6 cut(s)	104, 429, 484, 543, 1273, 1693
Sau96I	GGNCC	6 cut(s)	40, 159, 273, 283, 288, 1058
SchI	GAGTC	4 cut(s)	313, 319, 470, 623
ScrFI	CCNGG	5 cut(s)	138, 287, 393, 394, 510
SfaNI	GCATC	5 cut(s)	392, 517, 739, 885, 976
SfcI	CTRYAG	2 cut(s)	317, 522
SinI	GGWCC	2 cut(s)	273, 283
SmaI	CCCGGG	1 cut(s)	394
SmiMI	CAYNNNNRTG	1 cut(s)	425
SsiI	CCGC	6 cut(s)	22, 173, 237, 276, 814, 1481
SspI	AATATT	2 cut(s)	707, 1768
SspMI	CTAG	4 cut(s)	450, 852, 1125, 1362
StyD4I	CCNGG	5 cut(s)	136, 285, 391, 392, 508
StyI	CCWWGG	1 cut(s)	444
TaaI	ACNGT	4 cut(s)	552, 771, 890, 1735
TaiI	ACGT	1 cut(s)	1076
TaqI	TCGA	8 cut(s)	103, 330, 400, 487, 586, 733, 787, 1070
TauI	GCSGC	1 cut(s)	817
Tru1I	TTAA	7 cut(s)	972, 1137, 1431, 1710, 1757, 1770, 1788
Tru9I	TTAA	7 cut(s)	972, 1137, 1431, 1710, 1757, 1770, 1788
TseFI	GTSAC	1 cut(s)	859
TseI	GCWGC	2 cut(s)	358, 388
Tsp45I	GTSAC	1 cut(s)	859
TspDTI	ATGAA	6 cut(s)	845, 1247, 1394, 1436, 1527, 1635
TspGWI	ACGGA	1 cut(s)	121
TspMI	CCCGGG	1 cut(s)	392
VpaK11BI	GGWCC	2 cut(s)	273, 283
XagI	CCTNNNNNAGG	1 cut(s)	674
XapI	RAATTY	3 cut(s)	215, 596, 1427
XceI	RCATGY	2 cut(s)	606, 1507
XmaI	CCCGGG	1 cut(s)	392
XmiI	GTMKAC	1 cut(s)	1265
XspI	CTAG	4 cut(s)	450, 852, 1125, 1362
Zsp2I	ATGCAT	1 cut(s)	532

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.