FvH4_2g30330

phosphatidylinositol-3-phosphate binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0005768
Physical Location & Seq
Reverse (-)
23467352 .. 23488463
21112 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g30330.t2

Sequence Viewer

Length: 7572 bp
ATGGAGCTGGACAAAGAAACCGAAATCCTTTCCCGCCTGGCCGCGAACCACCTCTTCCTCGGCCAATTCGAGCCTCTCCGGGCGATCATCATCGCCCTCCGCGCCCGGAACCCCAACCTCGCCCTCGCCGTGCTCCAGACCATCGTCGCTCACTCCGGCCGCTTCGAGAATGTTCTCTGGTCGCCGTCGTGCCCTTCCCCAGCGATCCTCACTTACTTGTCCACCGTCGAGCTCTTGCAATTCGACAACGCCTCGTCGGCCTGGGGATTCGATCCCGAAACGCTGCGGCTGCGCGCCGAGTTTTTATTGCTGGTTCAGAGCTTGATCGATAGGGTTTCCGAGAGCCTCAGGAAGGGTTTCGATTTGGGGAGCATAGAGAAGGAGAAGGAGAAGGAGAAGAGCGATGGTTTCGAGGAGTTGATGGATGGTGCGGCGAGCAAGGAGCTGAGAGACGGCGGCGGTGAGTTGGAGCGGGGCGTTAGGGTTTTGGATAGAGTGTTGGAGTTGGGAGTGAATAGGTTGAAGCCGGAATCGCTAGCAGTAGTGAGTCAAGTGAGTGAGACTAGTGTGGAAATTGAGGAGGGGGAGTTGATGTGCTTGAGGAGCCTAGTGTGGGAGAATGCCGATGTTTTCGATGCGTTGTGTTGGAATGTACAGAGGCAAGTGAGGGGTTGGGAGGGAGATGATGCTTCGGGTATGGCCGTTACAGTGAGGAGGGATGATATGCCGAAAGAGGAGGATGTGAAGGTGCTTCGGATGATACAGAGGAGTGTTCAGCTAGCTCACTTGGATGCTATGAAAGAGTGCATCAAGGATGGTCAAGTGGATGGAGTGGTTTCGCGGATTCAGTTCCTTCACCTTGATTATGGAGTGGAGGAGACCGAGTATCGCATTGCTTTGCAAGATCTCTTCAAGATGGTGTCATCAGGAAAGGAGGGATATGGAGATTCCTGGCGAGACATGCGAGAAAAATTACTGCAGATTTATAGTGCAGCTCTTGCTTCAAGCTGTGGGCATCTTGTTAAAATGATACAAGTTCTTCAAGATGAGTTACTCTCAAAAGAGATTGAGATGTATAGATCTCTTGATAACAATCAGATTCCGCCACCTCTTGAACGTCTTCAAAGATATCTTGAAGAATTAAAACCTGGAACAGATGTAAATGATAAAACTTCTCCCTTCAGTAGTGTGGTTGCGTTTTGCATGAGAGACATGTACCATTATGCTCGTGTTTCTGGTCTACACCTGCTTGAATGTGTCATCAAAACAGCTTTGTCTGTGGTGAAGAGGGAGCAGCTTCAAGAAGCTAGCAATATTCTTTTATTGTTCCCTCGTCTTCAGCCGCTAGTAGCTGCCATGGGTTGGGATTTACTGTCTGGCAAAACTGCAGCACGAAGGAAATTAATGCAACTGCTGTGGAAAACAAAGTCGCAGGTTTTACGATTGGAAGAATCTTCCCTTTATAGTAACCAGTCAGATGAGATATCTTGTGTGGAATACCTTTGTGATTCTTTATGTTATCAACTCGATCTTGCCTCTTTCGTGGCCTGTGTCAATTCTGGCCAATCATGGAATTCCAAATTATCACTGACATTGTCGGCAGAAGACCAAATAGCATACAATGGTGAAGATGCCCAGTTAGACCCTTTCGTTGAAAACTTTGTACTGGAAAGGCTTTCCGCTCAAAGTCCTCTTCGGGTACTGTTTGATGTTGTCCCAGGCATAAAGTTTAAGGATGCTATTGAATTGATAAGCATGCAGCCAATTGCTTCTACTTTAGAAGCCTGGAAGAGGATGCAGGATATTGAACTTATGCACATGCGGTATGCTCTAGATTCAGCCGTTCTTGCACTTGGAATGATGGAAAAGAGTATGACCGCTGAAAGTCATCAAGTTGCGTTTTGCTATCTAAAAGACCTGCAGAACCATTTGGAGGCTGTAAATACTATCCCCCGCAAGATCATGATCGTGAATGTCATAATTTCACTCTTGCATATGGATGATCAGTCTCTCAATTTGAATCAATGTGCCTTACCAGAGAATTATTCTGAAGCACACTACACATGTACTTCAGAACAGATCAATCTAACTACATATGAAGGGGGAAATGAATTGGTTATATCTTTCACAGGGAAACTCCTTGAGATATTACATCACTGTCTTCCTTCAACAATAGCGGACCTTGATCATGCTCTTAGTGATGGTATGAATAGGGGTGGAAGACAAGCGGTGGAGTGGAGAGTGTCAATTGCTAAACACTTTATTGAAGAGTGGGAATGGCGGTTGTCAATTTTGCAGCGTCTTCTTCCATTATCTGAACGTCAGTGGAAATGGAAGGAAGCATTGACAGTATTACGAGCTGCACCATCTAAGCTACTTAACCTTTGCATGCAAAGGGCAAAGTATGACATTGGGGAAGAAGCAGTGCATCGATTCTCATTGTCTGCAGAAGATAGAGCTACACTTGAATTAGCTGAATGGGTTGATGGTGCTGTCAGAAGACAGTCGGTAGAAGATGTAGTCTCTCGTGCTGCTGATGATGGAACTTCTACCGTACATGATCTGGATTTTTCATCTTTACGATCTCAGTTAGGTCCTTTGGCTGCAATTCTTCTTTGTATTGATGTTGCTGCAACTTCGGCACGGTCTGCAAAGATGTCCCAGCAGCTTTTGGATCAGGCTCAAGTTATGCTGTCTGAGATATATCCAGGAGTTTCTCCAAAGATGGGCTCCACGTACTGGGATCAGATTCTTGAAGTGGGAGTTATTTCTGTTCTAAAAAGAATCCTTAAGCGTTTACATGAGTTCTTGGATCAGGATGATCCTCCAGCCCTTCAGGCCACTCTGTCTGGGGAGATGTTAATCTCCTCACCAAAGGATTCCCAACGATTGGGCCAACGGGAACGTGTTCTTGATATGCTACATCATATGATTGAAGATGCTCACAAAGGCAAGCGACAGTTTCTCAGTGGTAAGCTCCACAATCTTGCAAGAGCTGTGGCAGATGAGGAATCAGAGCTGAATTTTTCTAAAGGAGAAGGCCCTACTGTTGACCAAAAGGTTCTATCTGATTTTGACAAGGATGGAGTTCTTGGACTGGGGCTAAGAGTTGCCAAACAGATACCTTCAAGTTCCACAATTGGAGAAACTAGTGTGCAGCCTGTTGATTATGATGTAAAGGACAGTGGGAAGAGATTGTTTGGTCCATTAAGCACCAAACCCATGACATATCTTTCCCAATTTATTCTTCACATTGCAGCAATTGGTGACATAGTTGATGGCACAGATACAACTCATGATTTCAACTTTTTCTCCCTCGTGTATGAGTGGCCCAAGGATCTGTTAACCCGTCTTGTCTTTGACCGGGGCAGCACTGATGCAGCTGGTAAGGTAGCTGAGATTATGTGTGCAGATTTTGTGCATGAAGTAATTTCAGCATGTGTACCTCCAGTTTACCCCCCACGCTCTGGCCATGGATGGGCTTGTATTCCAGTCATACCCACCTTCCCTAAGAGTGGTTCGGAAAATAAAGTATTGTCCCCATCTTTCAAAGAAGCTAAGCCTAATTGTTACTCGCGTTCTTCAGCTTTGCCTGGAATCCCTCTCTACCCTTTGCAGTTAGATATTGTAAAACATTTAGTCAAACTATCACCAGTGAGGGCAGTCCTGGCATGTGTTTTTGGGAGTAGTATTTTGTACAATGGCAGTAATTCTTCTATCTCGGGCTCCTTGGATGATGGACTTCTACAGGCACCAGATGTTGACCGGTTGTTTTATGAGTTTGCTCTTGATCAATCTGAGAGGTTCCCAACTTTAAACCGATGGATACAAATGCAAACTAACCTGCATCGAGTTTCAGAGTTTGCTGTAACAGTTAAGCAAACTGACAATGGTGGTGAATCAAGAGCTGCTATCAAGAGGCTCCGTGAGCTTGACAGTGATACTGAGTCAGAAGTCGATGATGTTGTTAGTAATAGTATTCTGACAGCTTTACCAGATCTCGATAGTCAAGGTGGCACTGCTCTTGATTCATGGCGTGATTCATCTAAATCAGATGTTGCTGAGTTTGACACTTCAGTTTTCCTTTCTTTTGATTGGGAAAATGAAGAACCTTATGAGAAAGCAGTACAACGATTGATAGATGATGGAAAACTTATGGATGCTCTTGCACTTTCTGATCGCTTTCTGCGCAATGGAGCTTCAGATCAACTCCTTCAGCTACTCATTGAACATGAGGAAGAAAACCAGTTAGTCTCTGGACACTCTCAGGGTTATGGTGGCAACAGCATTTGGAGCACTAGTTGGCAGTATTGCCTGCGGTTGAAGGATAAAGAAGAGGCTGCCCGACTTGCTCTTAAGTGTATGCATAAATGGGAACTGAATGCTGCTTTAGACGTACTCACCATGTGCAGCTGCCATCTGCCTCAAAGTGATCCTATTAGGGAAGAGGTAATGTACAGGAGACAAGCTTTGCTGAGGTACAGCCACATTCTAAGTGCAGATGACCATTATAGCAGCTGGCAAGAGGTTGAGGCAGAATGTAAGGAAGATCCTGAGGGGTTAGCACTTAGATTAGCTGGAAAAGGAGCCGTTTCTGCTGCCTTAGAAGTGGCTGAAAGCACTGGGTTATCCATTGATTTGCGTAGAGAACTGCAGGGCCGGCAACTTGTGAAGCTTTTGACTGCAGATCCTCTCAGTGGGGGAGGTCCAGCAGAAGCTTCACGATTTCTTTCTTCACTGCGTGACTCAGATGATGCTCTACCAGTTGCCATGGGTGCGATGCAGCTTTTACCTGATTTGCGGTCGAAGCAGCTTCTTGTTCATTTCTTCCTGAAGCGAAGAGAAGGGAATCTTTCAGATGTTGAGGTTTCTCGGCTTAATTCATGGGCCTTGGGTCTTCGTGTTCTGGCTTCATTGCCATTGCCGTGGCAGCAAAGATGTTCTTCCTTGCATGAGCACCCTCATTTGATACTTGAGGTTCTTCTGATGAGGAAACAACTACACTCTGCAGCTTTGATTCTCAAAGAATTTCCTTTGTTGAGAGACAATAATGTGCTTATTGCCTATGCTACTAGAGCTATTGCAATCAGTATTAGCTCTCCCCCAAGAGAACATCGAGTATCTGTTTCTGGGACAAGATTGAAGCAGAAAACAAGAACAGGTGCACCTGTGAAGTCTTCCTTCACCAGCAGTCTCAGTAACTTGCAAAAAGAGGCTCGCAGAGCTTTCTCATGGGCTCCACGAAATAGTGGAGACAGGTCCACCCCGAAAGATGGTTACCGTAAAAGAAAGAGTTCTGGATTGACACCTTCTGAAAAAGTAGCTTGGGAGGCCATGGCTGGAATCCAGGAGGATCGTGCTTCAAGTTATTCTGTTGATGGGCAAGAACGGCTTCCTTCGATTTCAATTTCTGAAGAATGGATGCTATCTGGTGATCCATTGAAGGATGAAGCCGTTCGTGCATCTCACCGGTACGAGAGTGCTCCCGACATAACACTTTTCAAGGCACTGCTTTCTCTATGCTCAGATGATTCTGTGTCCGCAAAAACTGCATTGGATTTGTGCGTAAGTCAGATGAAGAATGTACTGAGTTCCCAACAATTGCCAGAGACTGCATCTGTGGAAACCATTGGTCGAGCATATCATGCCACAGAGACGTTTGTACAGGGATTACTTTATGCTAAATCGCTATTGAGAAAGCTTGTGGGCGGCAGCGATTTGTCGAGCAATTCTGAAAGAAGTAGAGATGCTGATGATGCATCTTCTGATGCTGGTAGCTCTAGTGTCGGTAGTCAGTCCACAGATGAGCTATCTGAAGTCATATTGCAGGCAGACATTTGGCTAGGACGTGCAGAGCTCCTTCAGAGTCTTCTGGGATCTGGAATTGCGGCTTCGCTAGATGATATTGCAGACAAAGAGTCATCTGCCTCTCTTCGTGATAGGCTGATTGTGGAAGAACGGTACAGCATGGCTGTATATACGTGTAAAAAGTGCAAGATTGATGTGGTTCCTGTTTGGAATGCTTGGGGACATGCTTTGATTCGGATGGAGCACTATGCACAAGCTCGCGTGAAGTTTAAGCAAGCTCTTCAATTGTACAAAGATGATCCTGTTCCTGTTATTCTTGAGATAATCAATACAATTGAAGGAGGTCCGCCAGTTGATGTTTCAGCTGTTCGTTCCATGTATGAACATTTGGCTAAAAGTGCACCTACAATCTTGGATGATTCTCTTTCTGCTGATTCATATCTTAATGTGTTATACATGCCATCCACATTTCCTCGTTCAGAGAGATCCAGGCGTTCTCTCGAATCTGCAAATAGCAGCTCCACATACTTGTCAGACTTTGAAGATGGACCACGCAGCAACTTAGACAGTGTTCGGTATGTTGAGTGTGTCAACTATTTACAAGAATATGCCAGGCAGCATTTACTCAATTTCATGTTCAGGCATGGCCACTATAATGATGCTTGCGTGTTGTTCTTTCCTCCAAATGCTGTTCCTCCACCTCCTCAGCCATCAGTAGTGGGGGTGGCATCCTCATCTTCATCCCCTCAAAGACCAGATCCTCTAGGAACTGATTATGGGACCATTGATGATTTGTGTGACTTGTGTGTTGGCTATGGCGCAATGCATGTTTTAGAAGAAGTGATTTCAACAAGAATGTCATCTACAACCCCACAAGATGTAGCAGTGATCCAGCATACAGATGCTGCCCTTGCTCGTATTTGTGTCTACTGTGAAACACATAGGCATTTCAATTACTTATACAAGTTTCAGGTTATTAAGAAGGACCATGTCGCTGCTGGACTCTGCTGCATTCAACTTTTTATGAACTCTTCTTTGCAAGAGGAAGCTATAAAACATTTGGAAAATTCCAAGATGCACTTTGATGAAGCGTTATCAGCACGGTACAGAGGTGGGGATTCTACTAAGCTTGTGACAAAGGGTGTTAGAGGAAAAGGAAAAAGTGCCTCTGAAAAGCTCACTGAGGAAGGACTTGTCAAGTTTTCTGCCCGGGTATCAATTCAGGTTGACGTCGTGAGATCCTATAATGATTCAGATGGACCGCATTGGAAACATTCACTTTTCGGAAACCCAAATGACTCCGAAACATTCAGGAGAAGGTGTAAAATTGCTGAATCTCTTGTCGAAAAGAACTTTGATTTGGCTTTCCAAGTGATTTATGAATTCACCCTTCCAGCTGTGGATATATATGCTGGTGTAGCTGCATCGCTTGCTGAAAGAAAAAAAGGTAGTCAGCTGACAGAATTTTTTAGAAACATTAAAGGGACCATTGATGATGATGATTGGGACCAGGTGTTGGGAGCTGCAATTAATGTATATGCTAACAAACACAAAGAACGCCCTGACCGTCTTATAGACATGTTGACCAGTAGCCACAGGAAAGTTCTGGCGTGTGTGGTTTGTGGGCGTCTGAAAAGTGCATTCCAAATTGCTTCTCGTAGCGGAAGTGTAGCTGATGTCCAATATGTAGCTCATCAGGCATTGCATGCGAATGCACTTCCTGTGCTTGATATGTGTAAACAATGGTTGGCTCAGTACATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

2524

Amino Acids

281.35

Weight (kDa)

5.44

Isoelectric Point (pI)

49.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_ZFYVE26 PF25569 1605 - 1724 1.5e-32 ZFYVE26-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1254
AatII GACGTC 1 cut(s) 7041
Acc16I TGCGCA 1 cut(s) 4190
Acc36I ACCTGC 4 cut(s) 1254, 1423, 1926, 3852
AccB1I GGYRCC 1 cut(s) 3751
AccB7I CCANNNNNTGG 5 cut(s) 1362, 2739, 2890, 3467, 7324
AccBSI CCGCTC 2 cut(s) 472, 1682
AccI GTMKAC 2 cut(s) 1240, 6735
AccII CGCG 6 cut(s) 44, 102, 294, 841, 3577, 6069
AcoI YGGCCR 7 cut(s) 39, 61, 157, 699, 1561, 3469, 6454
AcsI RAATTY 6 cut(s) 1573, 3022, 5027, 6874, 7190, 7271
AcyI GRCGYC 2 cut(s) 7038, 7435
AdeI CACNNNGTG 2 cut(s) 4407, 4742
AflII CTTAAG 2 cut(s) 2789, 4355
AflIII ACRYGT 6 cut(s) 1212, 2063, 2905, 5981, 7386, 7566
AgeI ACCGGT 2 cut(s) 3765, 5469
AhdI GACNNNNNGTC 1 cut(s) 5917
AhlI ACTAGT 3 cut(s) 563, 3149, 4298
AjiI CACGTC 1 cut(s) 5849
AjuI GAANNNNNNNTTGG 4 cut(s) 3231, 3263, 7151, 7183
Alw21I GWGCWC 9 cut(s) 135, 234, 4298, 4959, 5167, 5485, 5859, 6054, 6211
Alw44I GTGCAC 2 cut(s) 5163, 6207
AlwNI CAGNNNCTG 2 cut(s) 5612, 6713
Ama87I CYCGRG 2 cut(s) 3721, 7017
ApaLI GTGCAC 2 cut(s) 5163, 6207
ApoI RAATTY 6 cut(s) 1573, 3022, 5027, 6874, 7190, 7271
AseI ATTAAT 2 cut(s) 1403, 7338
AsiGI ACCGGT 2 cut(s) 3765, 5469
Asp700I GAANNNNTTC 6 cut(s) 356, 1119, 2907, 5293, 5391, 5454
AspLEI GCGC 5 cut(s) 104, 294, 296, 4191, 6629
AsuC2I CCSGG 5 cut(s) 80, 106, 3365, 7018, 7019
AsuNHI GCTAGC 3 cut(s) 535, 778, 1307
AvaI CYCGRG 2 cut(s) 3721, 7017
AxyI CCTNAGG 2 cut(s) 347, 4554
BaeGI GKGCMC 3 cut(s) 194, 5167, 6211
BaeI ACNNNNGTAYC 4 cut(s) 5464, 5497, 6904, 6937
BalI TGGCCA 3 cut(s) 1563, 3471, 6456
BanI GGYRCC 1 cut(s) 3751
BanII GRGCYC 5 cut(s) 234, 2732, 3728, 5239, 5859
BauI CACGAG 3 cut(s) 1227, 2526, 3317
Bbv12I GWGCWC 9 cut(s) 135, 234, 4298, 4959, 5167, 5485, 5859, 6054, 6211
BbvCI CCTCAGC 2 cut(s) 4475, 6513
BceAI ACGGC 9 cut(s) 113, 169, 469, 686, 1826, 4574, 4909, 5405, 5438
BciVI GTATCC 1 cut(s) 3819
BclI TGATCA 3 cut(s) 2002, 2185, 3790
BcnI CCSGG 5 cut(s) 80, 106, 3365, 7018, 7019
BcuI ACTAGT 3 cut(s) 563, 3149, 4298
BfmI CTRYAG 8 cut(s) 977, 1386, 1919, 2445, 3746, 4652, 4683, 5007
BfrI CTTAAG 2 cut(s) 2789, 4355
BfuAI ACCTGC 4 cut(s) 1254, 1423, 1926, 3852
BfuI GTATCC 1 cut(s) 3819
BglI GCCNNNNNGGC 2 cut(s) 257, 2837
BglII AGATCT 3 cut(s) 904, 1079, 3997
BlpI GCTNAGC 1 cut(s) 3558
BmeRI GACNNNNNGTC 1 cut(s) 5917
BmeT110I CYCGRG 2 cut(s) 3721, 7017
BmgBI CACGTC 1 cut(s) 5849
BmrI ACTGGG 4 cut(s) 1630, 2749, 3107, 4632
BmtI GCTAGC 3 cut(s) 539, 782, 1311
BmuI ACTGGG 4 cut(s) 1630, 2749, 3107, 4632
BoxI GACNNNNGTC 1 cut(s) 143
BplI GAGNNNNNCTC 2 cut(s) 1040, 1072
BpmI CTGGAG 3 cut(s) 119, 2811, 3432
Bpu10I CCTNAGC 2 cut(s) 4475, 6513
Bpu1102I GCTNAGC 1 cut(s) 3558
BpuEI CTTGAG 5 cut(s) 619, 2162, 2667, 4994, 6146
BpuMI CCSGG 5 cut(s) 80, 106, 3365, 7018, 7019
Bsa29I ATCGAT 2 cut(s) 327, 2431
BsaAI YACGTR 2 cut(s) 2736, 5982
BsaBI GATNNNNATC 5 cut(s) 89, 1092, 1964, 2861, 6246
BsaHI GRCGYC 2 cut(s) 7038, 7435
BsaI GGTCTC 1 cut(s) 872
BsaWI WCCGGW 2 cut(s) 3765, 5469
Bse118I RCCGGY 3 cut(s) 3765, 4659, 5469
Bse21I CCTNAGG 2 cut(s) 347, 4554
Bse3DI GCAATG 7 cut(s) 891, 3252, 4198, 4913, 4919, 6636, 7508
Bse8I GATNNNNATC 5 cut(s) 89, 1092, 1964, 2861, 6246
BseCI ATCGAT 2 cut(s) 327, 2431
BseJI GATNNNNATC 5 cut(s) 89, 1092, 1964, 2861, 6246
BseMI GCAATG 7 cut(s) 891, 3252, 4198, 4913, 4919, 6636, 7508
BsePI GCGCGC 1 cut(s) 292
BseRI GAGGAG 9 cut(s) 428, 593, 616, 727, 749, 781, 890, 2857, 6501
BseSI GKGCMC 3 cut(s) 194, 5167, 6211
BseX3I CGGCCG 1 cut(s) 157
BseYI CCCAGC 2 cut(s) 199, 2661
BsgI GTGCAG 7 cut(s) 1011, 2346, 3176, 3429, 4429, 4518, 5871
Bsh1236I CGCG 6 cut(s) 44, 102, 294, 841, 3577, 6069
Bsh1285I CGRYCG 2 cut(s) 160, 4805
BshNI GGYRCC 1 cut(s) 3751
BshTI ACCGGT 2 cut(s) 3765, 5469
BshVI ATCGAT 2 cut(s) 327, 2431
BsiEI CGRYCG 2 cut(s) 160, 4805
BsiHKAI GWGCWC 9 cut(s) 135, 234, 4298, 4959, 5167, 5485, 5859, 6054, 6211
BsiHKCI CYCGRG 2 cut(s) 3721, 7017
BsiSI CCGG 9 cut(s) 79, 106, 156, 527, 3364, 3766, 4660, 5470, 7018
BslFI GGGAC 8 cut(s) 1700, 2644, 3523, 5146, 6042, 6601, 7306, 7328
BsmBI CGTCTC 2 cut(s) 444, 5648
BsmFI GGGAC 8 cut(s) 1700, 2644, 3523, 5146, 6042, 6601, 7306, 7328
BsmI GAATGC 6 cut(s) 625, 4387, 6025, 6819, 7448, 7525
Bso31I GGTCTC 1 cut(s) 872
BsoBI CYCGRG 2 cut(s) 3721, 7017
Bsp1407I TGTACA 5 cut(s) 652, 3696, 4455, 5662, 6096
Bsp1720I GCTNAGC 1 cut(s) 3558
Bsp19I CCATGG 4 cut(s) 1356, 3472, 4770, 5334
BspDI ATCGAT 2 cut(s) 327, 2431
BspFNI CGCG 6 cut(s) 44, 102, 294, 841, 3577, 6069
BspHI TCATGA 2 cut(s) 1962, 3295
BspMAI CTGCAG 7 cut(s) 981, 1390, 1923, 2449, 4656, 4687, 5011
BspMI ACCTGC 4 cut(s) 1254, 1423, 1926, 3852
BspOI GCTAGC 3 cut(s) 539, 782, 1311
BspQI GCTCTTC 2 cut(s) 392, 6093
BspT107I GGYRCC 1 cut(s) 3751
BspTI CTTAAG 2 cut(s) 2789, 4355
BspTNI GGTCTC 1 cut(s) 872
BsrBI CCGCTC 2 cut(s) 472, 1682
BsrDI GCAATG 7 cut(s) 891, 3252, 4198, 4913, 4919, 6636, 7508
BsrFI RCCGGY 3 cut(s) 3765, 4659, 5469
BsrGI TGTACA 5 cut(s) 652, 3696, 4455, 5662, 6096
BssAI RCCGGY 3 cut(s) 3765, 4659, 5469
BssHII GCGCGC 1 cut(s) 292
BssNI GRCGYC 2 cut(s) 7038, 7435
BssSI CACGAG 3 cut(s) 1227, 2526, 3317
BssT1I CCWWGG 7 cut(s) 1356, 3333, 3472, 3729, 4770, 4890, 5334
Bst2BI CACGAG 3 cut(s) 1227, 2526, 3317
BstACI GRCGYC 2 cut(s) 7038, 7435
BstAFI CTTAAG 2 cut(s) 2789, 4355
BstAPI GCANNNNNTGC 6 cut(s) 998, 2648, 5549, 5645, 7238, 7514
BstAUI TGTACA 5 cut(s) 652, 3696, 4455, 5662, 6096
BstBAI YACGTR 2 cut(s) 2736, 5982
BstDSI CCRYGG 5 cut(s) 1356, 3472, 4770, 4925, 5334
BstEII GGTNACC 1 cut(s) 5276
BstENI CCTNNNNNAGG 2 cut(s) 350, 1789
BstFNI CGCG 6 cut(s) 44, 102, 294, 841, 3577, 6069
BstHHI GCGC 5 cut(s) 104, 294, 296, 4191, 6629
BstMCI CGRYCG 2 cut(s) 160, 4805
BstPAI GACNNNNGTC 1 cut(s) 143
BstPI GGTNACC 1 cut(s) 5276
BstSFI CTRYAG 8 cut(s) 977, 1386, 1919, 2445, 3746, 4652, 4683, 5007
BstSLI GKGCMC 3 cut(s) 194, 5167, 6211
BstUI CGCG 6 cut(s) 44, 102, 294, 841, 3577, 6069
BstXI CCANNNNNNTGG 1 cut(s) 4926
BstZI CGGCCG 1 cut(s) 157
Bsu15I ATCGAT 2 cut(s) 327, 2431
Bsu36I CCTNAGG 2 cut(s) 347, 4554
BsuI GTATCC 1 cut(s) 3819
BsuTUI ATCGAT 2 cut(s) 327, 2431
BtgI CCRYGG 5 cut(s) 1356, 3472, 4770, 4925, 5334
BtgZI GCGATG 4 cut(s) 76, 417, 4793, 7218
BtrI CACGTC 1 cut(s) 5849
BtsI GCAGTG 5 cut(s) 2430, 4017, 4736, 5507, 6699
BveI ACCTGC 4 cut(s) 1254, 1423, 1926, 3852
CaiI CAGNNNCTG 2 cut(s) 5612, 6713
CciI TCATGA 2 cut(s) 1962, 3295
CfoI GCGC 5 cut(s) 104, 294, 296, 4191, 6629
Cfr10I RCCGGY 3 cut(s) 3765, 4659, 5469
Cfr9I CCCGGG 1 cut(s) 7017
ClaI ATCGAT 2 cut(s) 327, 2431
CseI GACGC 2 cut(s) 2288, 7424
CsiI ACCWGGT 1 cut(s) 7317
CspAI ACCGGT 2 cut(s) 3765, 5469
CspCI CAANNNNNGTGG 4 cut(s) 1397, 1432, 2979, 3014
DraI TTTAAA 1 cut(s) 3816
DraIII CACNNNGTG 2 cut(s) 4407, 4742
DriI GACNNNNNGTC 1 cut(s) 5917
EaeI YGGCCR 7 cut(s) 39, 61, 157, 699, 1561, 3469, 6454
EagI CGGCCG 1 cut(s) 157
Eam1105I GACNNNNNGTC 1 cut(s) 5917
EciI GGCGGA 2 cut(s) 1092, 6144
Ecl136II GAGCTC 2 cut(s) 232, 5857
EclXI CGGCCG 1 cut(s) 157
Eco130I CCWWGG 7 cut(s) 1356, 3333, 3472, 3729, 4770, 4890, 5334
Eco24I GRGCYC 5 cut(s) 234, 2732, 3728, 5239, 5859
Eco31I GGTCTC 1 cut(s) 872
Eco32I GATATC 2 cut(s) 1130, 1485
Eco52I CGGCCG 1 cut(s) 157
Eco53kI GAGCTC 2 cut(s) 232, 5857
Eco81I CCTNAGG 2 cut(s) 347, 4554
Eco88I CYCGRG 2 cut(s) 3721, 7017
Eco91I GGTNACC 1 cut(s) 5276
EcoICRI GAGCTC 2 cut(s) 232, 5857
EcoNI CCTNNNNNAGG 2 cut(s) 350, 1789
EcoO109I RGGNCCY 2 cut(s) 2594, 3041
EcoO65I GGTNACC 1 cut(s) 5276
EcoRI GAATTC 2 cut(s) 1573, 7190
EcoRV GATATC 2 cut(s) 1130, 1485
EcoT14I CCWWGG 7 cut(s) 1356, 3333, 3472, 3729, 4770, 4890, 5334
EcoT22I ATGCAT 3 cut(s) 4368, 5761, 6636
EcoT38I GRGCYC 5 cut(s) 234, 2732, 3728, 5239, 5859
ErhI CCWWGG 7 cut(s) 1356, 3333, 3472, 3729, 4770, 4890, 5334
Esp3I CGTCTC 2 cut(s) 444, 5648
FaqI GGGAC 8 cut(s) 1700, 2644, 3523, 5146, 6042, 6601, 7306, 7328
FauI CCCGC 3 cut(s) 41, 465, 1961
FauNDI CATATG 3 cut(s) 1995, 2095, 2928
FbaI TGATCA 3 cut(s) 2002, 2185, 3790
FblI GTMKAC 2 cut(s) 1240, 6735
FriOI GRGCYC 5 cut(s) 234, 2732, 3728, 5239, 5859
FspI TGCGCA 1 cut(s) 4190
GlaI GCGC 5 cut(s) 103, 293, 295, 4190, 6628
GsaI CCCAGC 2 cut(s) 203, 2665
GsuI CTGGAG 3 cut(s) 119, 2811, 3432
HapII CCGG 9 cut(s) 79, 106, 156, 527, 3364, 3766, 4660, 5470, 7018
HgaI GACGC 2 cut(s) 2288, 7424
HhaI GCGC 5 cut(s) 104, 294, 296, 4191, 6629
Hin1I GRCGYC 2 cut(s) 7038, 7435
Hin6I GCGC 5 cut(s) 102, 292, 294, 4189, 6627
HinP1I GCGC 5 cut(s) 102, 292, 294, 4189, 6627
HincII GTYRAC 6 cut(s) 3052, 3345, 3763, 6400, 7036, 7392
HindII GTYRAC 6 cut(s) 3052, 3345, 3763, 6400, 7036, 7392
HindIII AAGCTT 5 cut(s) 4467, 4673, 4716, 5699, 6935
HpaI GTTAAC 1 cut(s) 3345
HpaII CCGG 9 cut(s) 79, 106, 156, 527, 3364, 3766, 4660, 5470, 7018
Hpy99I CGWCG 5 cut(s) 149, 190, 230, 259, 7043
HpyCH4IV ACGT 9 cut(s) 1117, 2320, 2735, 2905, 4395, 5657, 5848, 5981, 7038
HpySE526I ACGT 9 cut(s) 1117, 2320, 2735, 2905, 4395, 5657, 5848, 5981, 7038
Hsp92I GRCGYC 2 cut(s) 7038, 7435
HspAI GCGC 5 cut(s) 102, 292, 294, 4189, 6627
KroI GCCGGC 1 cut(s) 4659
KroNI GCCGGC 1 cut(s) 4661
Ksp22I TGATCA 3 cut(s) 2002, 2185, 3790
KspAI GTTAAC 1 cut(s) 3345
LguI GCTCTTC 2 cut(s) 392, 6093
MabI ACCWGGT 1 cut(s) 7317
MaeII ACGT 9 cut(s) 1117, 2320, 2735, 2905, 4395, 5657, 5848, 5981, 7038
MbiI CCGCTC 2 cut(s) 472, 1682
MfeI CAATTG 7 cut(s) 1764, 2247, 3138, 3261, 5600, 6092, 6141
MlsI TGGCCA 3 cut(s) 1563, 3471, 6456
MluNI TGGCCA 3 cut(s) 1563, 3471, 6456
MlyI GAGTC 7 cut(s) 556, 3956, 4739, 5875, 5927, 6804, 7100
MmeI TCCRAC 3 cut(s) 447, 480, 626
Mox20I TGGCCA 3 cut(s) 1563, 3471, 6456
Mph1103I ATGCAT 3 cut(s) 4368, 5761, 6636
MroNI GCCGGC 1 cut(s) 4659
MroXI GAANNNNTTC 6 cut(s) 356, 1119, 2907, 5293, 5391, 5454
MscI TGGCCA 3 cut(s) 1563, 3471, 6456
MslI CAYNNNNRTG 8 cut(s) 789, 1967, 1998, 4924, 6462, 6708, 6891, 7518
Msp20I TGGCCA 3 cut(s) 1563, 3471, 6456
MspA1I CMGCKG 7 cut(s) 1880, 3383, 4413, 4518, 6173, 7205, 7264
MspCI CTTAAG 2 cut(s) 2789, 4355
MspI CCGG 9 cut(s) 79, 106, 156, 527, 3364, 3766, 4660, 5470, 7018
MunI CAATTG 7 cut(s) 1764, 2247, 3138, 3261, 5600, 6092, 6141
Mva1269I GAATGC 6 cut(s) 625, 4387, 6025, 6819, 7448, 7525
MvnI CGCG 6 cut(s) 44, 102, 294, 841, 3577, 6069
NaeI GCCGGC 1 cut(s) 4661
NciI CCSGG 5 cut(s) 80, 106, 3365, 7018, 7019
NcoI CCATGG 4 cut(s) 1356, 3472, 4770, 5334
NdeI CATATG 3 cut(s) 1995, 2095, 2928
NgoMIV GCCGGC 1 cut(s) 4659
NheI GCTAGC 3 cut(s) 535, 778, 1307
NmeAIII GCCGAG 3 cut(s) 39, 322, 4852
NmuCI GTSAC 4 cut(s) 3266, 4742, 6605, 6940
NsbI TGCGCA 1 cut(s) 4190
NsiI ATGCAT 3 cut(s) 4368, 5761, 6636
PaeI GCATGC 3 cut(s) 1759, 2392, 7517
PagI TCATGA 2 cut(s) 1962, 3295
PaqCI CACCTGC 1 cut(s) 1254
PauI GCGCGC 1 cut(s) 292
PciI ACATGT 4 cut(s) 1212, 2063, 7386, 7566
PciSI GCTCTTC 2 cut(s) 392, 6093
PcsI WCGNNNNNNNCGW 3 cut(s) 66, 126, 7372
PctI GAATGC 6 cut(s) 625, 4387, 6025, 6819, 7448, 7525
PdiI GCCGGC 1 cut(s) 4661
PdmI GAANNNNTTC 6 cut(s) 356, 1119, 2907, 5293, 5391, 5454
PflFI GACNNNGTC 2 cut(s) 1594, 6797
PflMI CCANNNNNTGG 5 cut(s) 1362, 2739, 2890, 3467, 7324
PfoI TCCNGGA 2 cut(s) 2707, 5346
PinAI ACCGGT 2 cut(s) 3765, 5469
PleI GAGTC 7 cut(s) 555, 3955, 4739, 5874, 5926, 6804, 7100
PpsI GAGTC 7 cut(s) 555, 3955, 4739, 5874, 5926, 6804, 7100
Ppu21I YACGTR 2 cut(s) 2736, 5982
PpuMI RGGWCCY 1 cut(s) 2594
PscI ACATGT 4 cut(s) 1212, 2063, 7386, 7566
PshAI GACNNNNGTC 1 cut(s) 143
PshBI ATTAAT 2 cut(s) 1403, 7338
Psp124BI GAGCTC 2 cut(s) 234, 5859
Psp5II RGGWCCY 1 cut(s) 2594
PspEI GGTNACC 1 cut(s) 5276
PspFI CCCAGC 2 cut(s) 199, 2661
PspPPI RGGWCCY 1 cut(s) 2594
PstI CTGCAG 7 cut(s) 981, 1390, 1923, 2449, 4656, 4687, 5011
PstNI CAGNNNCTG 2 cut(s) 5612, 6713
PsyI GACNNNGTC 2 cut(s) 1594, 6797
PteI GCGCGC 1 cut(s) 292
PvuII CAGCTG 6 cut(s) 3383, 4413, 4518, 6173, 7205, 7264
RseI CAYNNNNRTG 8 cut(s) 789, 1967, 1998, 4924, 6462, 6708, 6891, 7518
SacI GAGCTC 2 cut(s) 234, 5859
SapI GCTCTTC 2 cut(s) 392, 6093
SchI GAGTC 7 cut(s) 556, 3956, 4739, 5875, 5927, 6804, 7100
SexAI ACCWGGT 1 cut(s) 7317
SfcI CTRYAG 8 cut(s) 977, 1386, 1919, 2445, 3746, 4652, 4683, 5007
SmaI CCCGGG 1 cut(s) 7019
SmiMI CAYNNNNRTG 8 cut(s) 789, 1967, 1998, 4924, 6462, 6708, 6891, 7518
SmlI CTYRAG 7 cut(s) 598, 2141, 2682, 2789, 4355, 4973, 6125
SmoI CTYRAG 7 cut(s) 598, 2141, 2682, 2789, 4355, 4973, 6125
SpeI ACTAGT 3 cut(s) 563, 3149, 4298
SphI GCATGC 3 cut(s) 1759, 2392, 7517
SspI AATATT 1 cut(s) 1315
SstI GAGCTC 2 cut(s) 234, 5859
StyI CCWWGG 7 cut(s) 1356, 3333, 3472, 3729, 4770, 4890, 5334
TaiI ACGT 9 cut(s) 1120, 2323, 2738, 2908, 4398, 5660, 5851, 5984, 7041
TaqII GACCGA 1 cut(s) 896
TauI GCSGC 8 cut(s) 44, 162, 289, 434, 459, 1345, 5712, 5891
TseFI GTSAC 4 cut(s) 3266, 4742, 6605, 6940
Tsp45I GTSAC 4 cut(s) 3266, 4742, 6605, 6940
TspGWI ACGGA 1 cut(s) 3914
TspMI CCCGGG 1 cut(s) 7017
Tth111I GACNNNGTC 2 cut(s) 1594, 6797
Van91I CCANNNNNTGG 5 cut(s) 1362, 2739, 2890, 3467, 7324
Vha464I CTTAAG 2 cut(s) 2789, 4355
VneI GTGCAC 2 cut(s) 5163, 6207
VspI ATTAAT 2 cut(s) 1403, 7338
XagI CCTNNNNNAGG 2 cut(s) 350, 1789
XapI RAATTY 6 cut(s) 1573, 3022, 5027, 6874, 7190, 7271
XbaI TCTAGA 1 cut(s) 1831
XcmI CCANNNNNNNNNTGG 2 cut(s) 4253, 6803
XmaI CCCGGG 1 cut(s) 7017
XmiI GTMKAC 2 cut(s) 1240, 6735
XmnI GAANNNNTTC 6 cut(s) 356, 1119, 2907, 5293, 5391, 5454
ZraI GACGTC 1 cut(s) 7039
Zsp2I ATGCAT 3 cut(s) 4368, 5761, 6636
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.