RLG00000010315

phosphatidylinositol-3-phosphate binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0005768
Physical Location & Seq
Reverse (-)
589785 .. 610060
20276 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010315

Sequence Viewer

Length: 7572 bp
ATGGAGGACAAAGAAACCGAAATCCTTTCCCGCCTGGCCGCAAACCACCTCTTCCTCGGCCAATTCGAGCCCCTCCGAGCCATCCTCATCGCTCTCCGCGCCCGAAACCCCGCCCTCGCTCTCGCCGTCCTCCAGACCATAGTCGCCCACTCCGGTCACTTCGACAATGTTCTATGGTCCCCGTCCTGCCCTTCCCCGGCGATCCTCACTTACCTCTCCACCGTCGAGCTCTTGCAATTCGACGACGCCTCCTCCGCCTGGGGATTCGATCCCGAAACGCTGCGGTTGCGCGCCGAGTTTCTGCTGCTGGTTCAGAGCTTGATCGATAGGGTTTCGGAGAGCCTGCGGAGGAGTTTCGATTTGGAGAGCATAGAGAAGGAGAAGGAGAAGAGTGATGGTTTCGAAGAGCGGGCGGAGTTGATGGATGATACGATGAGCAAGGAGTTGAGAGACGGCGGTGGTGAATTGGAGAGCTGTGTTAGGGTTTTGGATAGAGTGTTGGAATTGGGGGTGAGTCGGTTGAAGCCGGAATCGTTAGCAGTAGGGAATGGTGATCAGGCTTTGGAAATTGAGGAAGGCGAGTTCATGTGCTTGAGGAGTCTAGTGTGGGAGTATGCTGATGTTTTCGATGCCTTGTGTTGGAATGTACAGAGGCAAGTGAGGGGTTGGGAGGGAGATGATGCTTCGGGATTGGCCATAACAGTGAGGAGGGATGATATGCCCAAAGAGGAGGATGTGAAGGTTCTTCGTTTGATACAGAGGAGTGTACAGTTAGCTCACTTGGATGCTATGAGAGAGTGCATCAAGGATGGTGAAATGGATGGAGTGGTTTCGCGGATTCGGTTTCTTCATCTTGATTATGGAGTGGAGGAGACTGAGTATCGCATTGCTTTGCAAGATCTCCTCAAGATGGTGTCATCAGGAAAGGAGGGATATGGAGATTCCTGGCGAGACATGCGAGAAAAATTACTGCAGATTTATAGTGCAGCTCTTGCTTCAAACTCTGAGCATCTTGTTCAAATGATACAAGTTCTTCAGGATGAGTTACTCTCAAAAGAGATTGAGATATATAGATCTCTTGATCACAATCAAATTCCGCCACCTCTTGACCGTCTTCAAAGATATCTTGAAGAATTAAAACCTGGCACAGATGTAAATGATAAAACTTCTCCCTTTAATAGTGTAGTTGCATTTTGCATGAGAGACATGTACCATTATGCTCGTGTTTCTGGTTTACACCTGCTTGAATGTGTCATGGAGACAGCTTTGTCCGTGGTGAAGAGGGAGCAGCTTCAAGAAGCTAGCAATATTCTTTTATTGTTCCCCCGTCTTCAGCCCCTAGTAGCCGCCATGGGTTGGGATTTACTGTCTGGCAAAACTGCAGCACGAAGGAAACTAATGCAACTGCTGTGGAAAACTAAGTCGCAGGTTTTACGGCTGGAAGAATCTTCCCTTTATAGTAACCAGTCAGATGAGATATCTTGCGTGGAATATCTTTGTGATTCTTTATGTTATCAACTCGATCTTGCCTCATTTGTGGCCTGTGTCAATTCTGGTCAATCATGGAATTCAAAATTATCACTTACATTGTCTGCAAAAGACCAAATAGCATACAATGGTGAAGATGCCCAGTTAGACCCTTTTGTTGAAAACTTCGTACTGGAAAGGCTTTCCGCTCAAAGTCCTCTTCGGGTACTGTTTGACGTTGTTCCAGGCATAAAATTTCAGGACGCTATTGAATTGATAAGCATGCAGCCAATTGCTTCAACTTTAGAAGCCTGGAAGAGGATGCAGGATATTGAACTTATGCACATGCGGTATGCTCTAGATTCAGCTGTTCTTGCACTTGGAGTGATGGAAAAGAGTATGACCGCTGAAAGTCATCAAGTTGCATTTTGCTATTTAAAAGACCTGCAGAACCATTTGGAGGCTGTAAATACTATCCCCCGCAAGATCATGATCGTGAATGTCATAATTTCGCTCTTGCATATGGATGATCAGTCTCTCAATTTGAATCATTGTGCTTCGCCAGTGGGTTATTCTGAAGCACACTACACATGTGCTTCAGAACAGATCAATCTGACTACGTGTGAAGGGGGAAATGAATTGGTTATATCTTTCACAGGAAAACTACTTGAGATATTACATCACTGTCTTCCTTCAACGATAGCGGACAGTGATCATGCTCTTAGTGATGGTAGAAGTAGGGGTGGAAGACAAGCAGTGGAGTGGAGAGTGTCAATTGCTAGACACTTTATTGAAGAGTGGGAATGGCGGTTGTCAATTTTGCAGCGTCTCCTGCCATTATCTGAACGTCAGTGGAAATGGAAGGAAGCATTGACAGTATTACGTGCTGCGCCATCTAAGCTACTTAACCTTTGCATGCAAAGGGCAAAGTATGACATTGGGGAAGAAGCAGTGCACCGATTCTCATTGTCTGCAGAAGATAGAGCTACACTTGAATTAGCTGAATGGGTAGATAGTGCTGTCAGAAGACAGTCGGTAGAAGATGTAGTTTCTCGTGCTGCTGATGATGGAACTTCTACAGTACATGATCTGGATTTTTCATCATTACGCTCTCAATTAGGTCCTTTGGCTGCGATTCTTCTTTGTATTGATGTTGCTGCTACTTCGGCACGGTCTGCAAAGATGTCCCAGCAGCTTTTGGATCAGGCTCAAGTTATGCTGTCTGAGATATATCCAGGAGTTTCTCCAAAGATGGGCTCCACGTACTGGGATCAGATTCTTGAAGTGGGAGTTATTTCTGTTCTAAAAAGAATCCTCAAGCGTTTACATGAGTTCTTGGATCAGGATGATCCTCCAGCCCTTCAGGCCACTCTCTCTGGGGAGATTTTCATCTCCTCACCAAAGGACTCCCACCGACTGGGACAACGGGAACGTGTTCTTGATATGCTACATCATATGATTGAAGATGCTCACAAAGGCAAGCGGCAGTTTCTCAGTGGTAAGCTCCATAATCTTGCAAGAGCTGTGGCTGATGAAGAATCAGAGCTCAATTTTTCTAAAGGAGAAGGCCCTTCTGTTGACCAAAAGTTTCTATCCGATTATGACAAGGACGGAGTTCTTGGACTGGGGCTAAGAGTTGCCAAACAGATACCTTCAAGTTCCACAATTGGAGAAACTAGTGTGCAGCCTGTTGTTTTTGATGTAAAGGACAGTGGGAAGAGATTGTTTGGTCCATTAAGTACCAAACCCATGACATATCTTTCACAATTTATTCTTCACATTGCTGCAATTGGTGACATAGTTGATGGCACAGATACAACTCATGATTTCAACTTTTTCTCCCTTGTGTATGAGTGGCCCAAGGATCTTTTAACCCGTCTTGTCTTTGACCGGGGCAGCACTGATGCAGCTGGTAAGGTAGCTGAGATTATGTGTGCAGATTTTGTGCATGAAGTAATTTCAGCATGTGTACCTCCTGTTTATCCCCCACGTTCTGGCCATGGATGGGCCTGTATTCCGGTCATTCCCACCTTCCCTAAGAGTGGTTCGGAAAATAAAGTATTGTCCCCATCTTTCAAAGAAGCTAAGCCTAATTGTTACTCGCGCTCTTCATCTTTGCCTGGAATCCCTCTATACCCTTTGCAGTTAGATATAGTAAAACATTTGGTCAAACTATCCCCAGTGAGGGCAGTCCTGGCATGTGTATTTGGGAGTAGCATTTTGTACAATGGCAGTAATTCTTCTATATCAAGCTCCTTGGATGATGGACTTCTACAGGCACCAGATGTTGACCGGTTGTTTTATGAGTTTGCTCTTGATCAATCTGAGAGGTTCCCAACTTTAAACCGATGGATACAAATGCAAACTAACCTGCATCGAGTTTCAGAGTTTGCTGTAACGGTTAAGCAAACTGACGATGGCGGTGAGACTAGAGGTGAAGCAAGAGCTGCTATCAAGAGGCTTCGTGAGCTTGACAGTGATACTGAGTCAGAAGTTGATGACGTTGTTGGTAATAGTGTTTCAACAGCTTTACCAGACCTCGATAGCCAAGGTGGTACTGCTCTTGATTCATGGCGTGATTCTTCTAAATCGGATGTTGCTGAGTTTGACACTTCAGTTTTCCTTTCTTTTGATTGGGAAAATGAAGAACCTTATGAGAAAGCTGTACAAAGATTGATAGATGATGGAAAACTCATGGATGCTCTTGCTCTTTCCGATCGCTTTCTTCGCAATGGAGCTTCAGATCAACTACTTCAGCTACTTATTGAACATGGGGAAGAGAACCAGTTAGTCTCTGGACACTCTCAGGGTTATGGTGGCAATAGCATTTGGAGCACTAGTTGGCAGTATTGCCTGCGGTTGAAGGATAAACAAGTGGCTGCCAGACTTGCTCTCAAGTGTATGCATAGATGGGAACTTGATGCTGCTTTAGACGTACTCACCATGTGCAGCTGCCACCTGCCTCAAAGTGACCCCATTAGGGAGGAGGTCATGTATAGGAGACAAGCTTTGCAGAGGTACAGCCACATTCTAAGTGCAGATGACCATTATAGCAGCTGGCAAGAGGTTGAGGCAGAGTGTAAGGAAGATCCTGAGGGGTTGGCACTTAGATTAGCTGGAAAAGGAGCTGTTTCTGCTGCCTTGGAAGTGGCTGAAAGCGCGGGGTTATCCATTGATTTGCGTAGAGAACTGCAGGGCCGGCAACTTGTGAAGCTTTTGACTGCAGATCCTCTCAATGGGGGAGGTCCAGCAGAAGCTTCACGATTTCTTTCTTCATTGCGCGACTCAGATGATGCTCTACCAGTTGCCATGGGTGCGATGCAGCTTTTACCTGATTTGCGGTCAAAGCAGCTTCTTGTTCATTTCTTCCTGAAGCGGAGAGAAGGGAATCTTTCAGATGTTGAGGTTTCTCGGCTTAATTCATGGGCCTTGGGGCTTCGTGTTCTGGCTGCCTTGCCATTGCCATGGCAGCAAAGATGTTCGTCCTTGCATGAGCACCCTCATTTGATACTTGAGGTTCTTCTGATGAGGAAACAACTACAATCTGCTGCTTTGATTCTCAAAGAATTTCCTTTGTTGAGAGACAATAATGCACTTATTGCCTATGCTACTAAAGCTATTGCAATCAGTATTAGCTCTCCCCCAAGAGAACATCGAGTATCTGTTTCGGGGACAAGATTAAAGCAGAAAACAAGAACAGGTGCACCTGTGAAGTCTTCTTTCACTAGCAGTCTCAGTAACTTGCAAAAAGAAGCTCGTAGAGCTTTCTCTTGGACTCCACGAAATAGTGGAGACAGGTCCACCCCGAAAGATGGTTACCGTAAGAGAAAGAGTTCTGGATTGACACCCTCTGAAAAAGTAGCTTGGGAGGCCATGGCTGGAATCCAGGAGGATCGTGCTTCAACATATTCTGTTGATGGGCAAGAACGGCTTCCTTCAATTTCAATGTCTGAAGAATGGATGCTAACTGGTGATCCATTGAAGGATGAAGCTGTTCGTGCATCTCACCGATACGAGAGTGCTCCTGACATAACGCTTTTCAAGGCACTGCTTTCTCTATGCTCAGATGATTCTGTGTCAGCAAAAACTGCATTGGATTTGTGTGTAACTCAGATGAAGAATGTACTGAGTTCCCAACAATTGCCAGAGAATGCATCTGTGGAAACCATTGGCCGAGCATATCATGCCACAGAGACGTTTGTACAGGGGCTACTTTATGCTAAATCACTGTTGAGAAAGCTTGTGGGCGGCAGTGATTTGTCGAGTAATTCAGAAAGAAGTAGGGATGCTGATGATGCATCTTCTGATGCTGGTAGCTCTAGTGTGGGTAGTCAGTCCACAGATGAGTTATCTGAAGTTCTGTTGCAGGCAGACACTTGGCTAGGACGTGCTGAGCTGCTTCAGAGCCTTCTGGGATCAGGAATTGCTGCTTCTCTAGATGATATTGCGGATAAAGAGTCATCTGCCTCTCTTCGTGATAGGCTGATTGTGGAAGAACGGTACAGCATGGCCGTATATACATGTAAAAAGTGCAAGATTGATGTGGTTCCTGTTTGGAATGCATGGGGACATGCTTTGATTCGGATGGAGCACTATGCACAAGCTCGCGTGAAGTTCAAGCAAGCTCTTCAACTGTACAAAGGTGATCCTGCTCCTGTTATTCTTGAGATAATCAATACAATTGAAGGAGGTCCGCCAGTTGATGTTTCAGCTGTTCGTTCCATGTATGAACATTTGGCTAAAAGTGCACCTACAATCTTGGATGATTCTCTTTCTGCAGATTCATATCTCAATGTGTTATACATGCCATCCACATTTCCTCGTTCAGAGAGATCCAGGCGTTCTCAGGAATCTGCAAATAACAGCTCCGCATATATGTCAGACTTTGAAGATGGACCACGCAGCAACTTAGACAGTGTTCGGTATGTTGAGTGTGTCAACTATTTACAAGAATATGCCAGGCAGCATCTGCTCAATTTCATGTTCAGGCATGGCCACTATAATGACGCTTGCATGTTGTTCTTTCCTCCAAATGCTGTTCCCCCTCCTCCTCAGCCATCAGTTGCAGGGGTGGCATCCTCATCTTCATCCCCTCAAAGACCAGATCCTCTAGGAACTGATTATGGGACCATTGATGATTTGTGTGATTTATGTGTTGGTTATGGCGCAATGCATGTTTTAGAAGAAGTGATCTCAGTGAGAATGTCATCTACGACCCCACAAGATGTGGCAGTGATCCAGCATACAGCTGCAGCCCTTGCTCGTATCTGTGTCTACTGTGAAACACATAGGCATTTCAATTATTTATACAAGTTTCAGGTTATTAAGAAGGACCATGTCGCTGCTGGACTGTGCTGCATCCAACTTTTTATGAACTCTTCTTTGCAAGAGGAAGCTATAAAACATTTGGAAAATTCCAAGATGCACTTTGATGAAGCACTATCAGCACGGTACAAAGGTGGGGATTCTACTAAGCTTGTGACGAAGGGTGTTAGAGGAAAAAGTGCCTCTGAAAAGCTCACTGAAGAAGGACTTGTCAAGTTTTCTGCCCGGGTATCAATTCAGGTTGAAGTTGTGAGATCCTATAATGATTCAGATGGACCCCATTGGAAACACTCACTTTTCGGAAACCCAAATGACTCCGAAACATTCAGGAGAAGGTGTAAAATTGCTGAATCTCTTGTGGAAAAGAACTTTGATTTGGCTTTCCAAGTGATTTATGAATTCACCCTTCCAGCTGTGGATATATATGCTGGTGTAGCTGCATCACTTGCTGAGAGAAAAAAAGGTAGTCAGCTGACAGAATTTTTTAGAAACATTAAAGGGACCATTGATGATGATGATTGGGACCAGGTCTTGGGAGCTGCAATTAATGTATATGCTAACAAACACAAAGAACGCCCTGACCGTCTTATAGATATGTTGACCAGTAGCCACAGGAAGGTTCTGGCTTGTGTGGTTTGTGGACGTCTAAAAAGTGCATTCCAAATTGCTTCTCGTAGTGGAAGTGTAGCTGATGTCCAATATGTAGCTCATCAGGCATTGCATGCGAATGCGCTTCCTGTACTCGATATGTGTAAACAATGGCTGGCTCAGTATATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

2524

Amino Acids

281.37

Weight (kDa)

5.43

Isoelectric Point (pI)

52.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_ZFYVE26 PF25569 2401 - 2520 2.4e-32 ZFYVE26-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1248, 4434
AasI GACNNNNNNGTC 1 cut(s) 1267
AatII GACGTC 1 cut(s) 7438
Acc36I ACCTGC 5 cut(s) 1248, 1417, 1920, 3846, 4434
AccB1I GGYRCC 1 cut(s) 3745
AccB7I CCANNNNNTGG 5 cut(s) 1356, 2733, 2884, 3461, 7324
AccBSI CCGCTC 2 cut(s) 409, 1676
AccI GTMKAC 1 cut(s) 6741
AccII CGCG 7 cut(s) 99, 291, 835, 3571, 4628, 4749, 6075
AcoI YGGCCR 7 cut(s) 36, 58, 693, 3463, 5638, 5976, 6460
AcsI RAATTY 7 cut(s) 1092, 1567, 1721, 5033, 6880, 7190, 7271
AcyI GRCGYC 2 cut(s) 246, 7435
AdeI CACNNNGTG 1 cut(s) 4413
AflIII ACRYGT 5 cut(s) 1206, 2057, 2087, 2899, 5987
AgeI ACCGGT 1 cut(s) 3759
AhlI ACTAGT 2 cut(s) 3143, 4304
AjiI CACGTC 1 cut(s) 5855
AjuI GAANNNNNNNTTGG 2 cut(s) 7151, 7183
AloI GAACNNNNNNTCC 2 cut(s) 566, 598
Alw21I GWGCWC 9 cut(s) 231, 2424, 3015, 4304, 4965, 5173, 5491, 6060, 6217
Alw44I GTGCAC 3 cut(s) 2420, 5169, 6213
AlwNI CAGNNNCTG 1 cut(s) 6436
Ama87I CYCGRG 1 cut(s) 7017
ApaLI GTGCAC 3 cut(s) 2420, 5169, 6213
ApoI RAATTY 7 cut(s) 1092, 1567, 1721, 5033, 6880, 7190, 7271
AseI ATTAAT 1 cut(s) 7338
AsiGI ACCGGT 1 cut(s) 3759
Asp700I GAANNNNTTC 4 cut(s) 2901, 5299, 5397, 5460
AspLEI GCGC 9 cut(s) 101, 291, 293, 2359, 3573, 4628, 4749, 6635, 7525
AsuC2I CCSGG 4 cut(s) 197, 3359, 7018, 7019
AsuII TTCGAA 1 cut(s) 402
AsuNHI GCTAGC 1 cut(s) 1301
AvaI CYCGRG 1 cut(s) 7017
AxyI CCTNAGG 1 cut(s) 4560
BaeGI GKGCMC 3 cut(s) 2424, 5173, 6217
BaeI ACNNNNGTAYC 4 cut(s) 5470, 5503, 6910, 6943
BalI TGGCCA 3 cut(s) 695, 3465, 6462
BanI GGYRCC 1 cut(s) 3745
BanII GRGCYC 4 cut(s) 72, 231, 2726, 3015
BauI CACGAG 2 cut(s) 1221, 2520
BbsI GAAGAC 6 cut(s) 1106, 1322, 2147, 2221, 2500, 5175
Bbv12I GWGCWC 9 cut(s) 231, 2424, 3015, 4304, 4965, 5173, 5491, 6060, 6217
BbvCI CCTCAGC 1 cut(s) 6519
BceAI ACGGC 5 cut(s) 110, 469, 1451, 5411, 5963
BciVI GTATCC 1 cut(s) 3813
BclI TGATCA 5 cut(s) 553, 1081, 1996, 2179, 3784
BcnI CCSGG 4 cut(s) 197, 3359, 7018, 7019
BcuI ACTAGT 2 cut(s) 3143, 4304
BfuAI ACCTGC 5 cut(s) 1248, 1417, 1920, 3846, 4434
BfuI GTATCC 1 cut(s) 3813
BglI GCCNNNNNGGC 1 cut(s) 2831
BglII AGATCT 2 cut(s) 898, 1073
BlpI GCTNAGC 2 cut(s) 3552, 5859
BmeT110I CYCGRG 1 cut(s) 7017
BmgBI CACGTC 1 cut(s) 5855
BmiI GGNNCC 9 cut(s) 179, 2725, 3747, 3800, 6015, 6595, 7069, 7294, 7316
BmrI ACTGGG 5 cut(s) 1624, 2743, 2894, 3101, 3641
BmtI GCTAGC 1 cut(s) 1305
BmuI ACTGGG 5 cut(s) 1624, 2743, 2894, 3101, 3641
BoxI GACNNNNGTC 1 cut(s) 140
BpiI GAAGAC 6 cut(s) 1106, 1322, 2147, 2221, 2500, 5175
BplI GAGNNNNNCTC 4 cut(s) 69, 101, 1034, 1066
BpmI CTGGAG 2 cut(s) 116, 2805
Bpu10I CCTNAGC 1 cut(s) 6519
Bpu1102I GCTNAGC 2 cut(s) 3552, 5859
Bpu14I TTCGAA 1 cut(s) 402
BpuEI CTTGAG 8 cut(s) 613, 890, 2156, 2661, 2768, 4346, 5000, 6152
BpuMI CCSGG 4 cut(s) 197, 3359, 7018, 7019
Bsa29I ATCGAT 1 cut(s) 324
BsaAI YACGTR 3 cut(s) 2088, 2351, 2730
BsaBI GATNNNNATC 4 cut(s) 1086, 1958, 2855, 6252
BsaHI GRCGYC 2 cut(s) 246, 7435
BsaWI WCCGGW 3 cut(s) 152, 3484, 3759
Bse118I RCCGGY 2 cut(s) 3759, 4665
Bse21I CCTNAGG 1 cut(s) 4560
Bse3DI GCAATG 7 cut(s) 885, 3246, 4204, 4742, 4925, 6642, 7508
Bse8I GATNNNNATC 4 cut(s) 1086, 1958, 2855, 6252
BseCI ATCGAT 1 cut(s) 324
BseJI GATNNNNATC 4 cut(s) 1086, 1958, 2855, 6252
BseMI GCAATG 7 cut(s) 885, 3246, 4204, 4742, 4925, 6642, 7508
BsePI GCGCGC 1 cut(s) 289
BseSI GKGCMC 3 cut(s) 2424, 5173, 6217
BseYI CCCAGC 1 cut(s) 2655
BsgI GTGCAG 5 cut(s) 1005, 3170, 3423, 4435, 4524
Bsh1236I CGCG 7 cut(s) 99, 291, 835, 3571, 4628, 4749, 6075
Bsh1285I CGRYCG 1 cut(s) 4186
BshNI GGYRCC 1 cut(s) 3745
BshTI ACCGGT 1 cut(s) 3759
BshVI ATCGAT 1 cut(s) 324
BsiEI CGRYCG 1 cut(s) 4186
BsiHKAI GWGCWC 9 cut(s) 231, 2424, 3015, 4304, 4965, 5173, 5491, 6060, 6217
BsiHKCI CYCGRG 1 cut(s) 7017
BsiSI CCGG 8 cut(s) 153, 197, 527, 3358, 3485, 3760, 4666, 7018
BslFI GGGAC 9 cut(s) 163, 2638, 2901, 3517, 5152, 6048, 6607, 7306, 7328
BsmBI CGTCTC 3 cut(s) 444, 2300, 5654
BsmFI GGGAC 9 cut(s) 163, 2638, 2901, 3517, 5152, 6048, 6607, 7306, 7328
BsmI GAATGC 4 cut(s) 5623, 6031, 7448, 7525
BsoBI CYCGRG 1 cut(s) 7017
Bsp119I TTCGAA 1 cut(s) 402
Bsp1407I TGTACA 6 cut(s) 646, 766, 3690, 4132, 5668, 6102
Bsp1720I GCTNAGC 2 cut(s) 3552, 5859
Bsp19I CCATGG 5 cut(s) 1350, 3466, 4776, 4931, 5340
BspDI ATCGAT 1 cut(s) 324
BspFNI CGCG 7 cut(s) 99, 291, 835, 3571, 4628, 4749, 6075
BspHI TCATGA 2 cut(s) 1956, 3289
BspLI GGNNCC 9 cut(s) 179, 2725, 3747, 3800, 6015, 6595, 7069, 7294, 7316
BspMAI CTGCAG 8 cut(s) 975, 1384, 1917, 2443, 4662, 4693, 6247, 6721
BspMI ACCTGC 5 cut(s) 1248, 1417, 1920, 3846, 4434
BspOI GCTAGC 1 cut(s) 1305
BspQI GCTCTTC 3 cut(s) 399, 3580, 6099
BspT104I TTCGAA 1 cut(s) 402
BspT107I GGYRCC 1 cut(s) 3745
BsrBI CCGCTC 2 cut(s) 409, 1676
BsrDI GCAATG 7 cut(s) 885, 3246, 4204, 4742, 4925, 6642, 7508
BsrFI RCCGGY 2 cut(s) 3759, 4665
BsrGI TGTACA 6 cut(s) 646, 766, 3690, 4132, 5668, 6102
BssAI RCCGGY 2 cut(s) 3759, 4665
BssHII GCGCGC 1 cut(s) 289
BssNI GRCGYC 2 cut(s) 246, 7435
BssSI CACGAG 2 cut(s) 1221, 2520
Bst2BI CACGAG 2 cut(s) 1221, 2520
BstACI GRCGYC 2 cut(s) 246, 7435
BstAUI TGTACA 6 cut(s) 646, 766, 3690, 4132, 5668, 6102
BstBAI YACGTR 3 cut(s) 2088, 2351, 2730
BstBI TTCGAA 1 cut(s) 402
BstDSI CCRYGG 6 cut(s) 1272, 1350, 3466, 4776, 4931, 5340
BstEII GGTNACC 1 cut(s) 5282
BstENI CCTNNNNNAGG 1 cut(s) 1783
BstFNI CGCG 7 cut(s) 99, 291, 835, 3571, 4628, 4749, 6075
BstHHI GCGC 9 cut(s) 101, 291, 293, 2359, 3573, 4628, 4749, 6635, 7525
BstMCI CGRYCG 1 cut(s) 4186
BstPAI GACNNNNGTC 1 cut(s) 140
BstPI GGTNACC 1 cut(s) 5282
BstSLI GKGCMC 3 cut(s) 2424, 5173, 6217
BstUI CGCG 7 cut(s) 99, 291, 835, 3571, 4628, 4749, 6075
BstV2I GAAGAC 6 cut(s) 1106, 1322, 2147, 2221, 2500, 5175
BstX2I RGATCY 8 cut(s) 898, 1073, 3331, 4555, 4693, 6299, 6571, 7046
BstXI CCANNNNNNTGG 1 cut(s) 4932
BstYI RGATCY 8 cut(s) 898, 1073, 3331, 4555, 4693, 6299, 6571, 7046
Bsu15I ATCGAT 1 cut(s) 324
Bsu36I CCTNAGG 1 cut(s) 4560
BsuI GTATCC 1 cut(s) 3813
BsuTUI ATCGAT 1 cut(s) 324
BtgI CCRYGG 6 cut(s) 1272, 1350, 3466, 4776, 4931, 5340
BtgZI GCGATG 2 cut(s) 73, 4799
BtrI CACGTC 1 cut(s) 5855
BtsI GCAGTG 5 cut(s) 2229, 2424, 5513, 5725, 6705
BveI ACCTGC 5 cut(s) 1248, 1417, 1920, 3846, 4434
CaiI CAGNNNCTG 1 cut(s) 6436
CciI TCATGA 2 cut(s) 1956, 3289
CfoI GCGC 9 cut(s) 101, 291, 293, 2359, 3573, 4628, 4749, 6635, 7525
Cfr10I RCCGGY 2 cut(s) 3759, 4665
Cfr9I CCCGGG 1 cut(s) 7017
ClaI ATCGAT 1 cut(s) 324
CseI GACGC 4 cut(s) 254, 1739, 2282, 6482
CsiI ACCWGGT 1 cut(s) 7317
CspAI ACCGGT 1 cut(s) 3759
CspCI CAANNNNNGTGG 4 cut(s) 1391, 1426, 2973, 3008
DraI TTTAAA 2 cut(s) 1905, 3810
DraIII CACNNNGTG 1 cut(s) 4413
DrdI GACNNNNNNGTC 1 cut(s) 1267
DseDI GACNNNNNNGTC 1 cut(s) 1267
EaeI YGGCCR 7 cut(s) 36, 58, 693, 3463, 5638, 5976, 6460
EciI GGCGGA 4 cut(s) 244, 428, 1086, 6150
Ecl136II GAGCTC 2 cut(s) 229, 3013
Eco24I GRGCYC 4 cut(s) 72, 231, 2726, 3015
Eco32I GATATC 2 cut(s) 1124, 1479
Eco53kI GAGCTC 2 cut(s) 229, 3013
Eco81I CCTNAGG 1 cut(s) 4560
Eco88I CYCGRG 1 cut(s) 7017
Eco91I GGTNACC 1 cut(s) 5282
EcoICRI GAGCTC 2 cut(s) 229, 3013
EcoNI CCTNNNNNAGG 1 cut(s) 1783
EcoO109I RGGNCCY 2 cut(s) 2588, 3035
EcoO65I GGTNACC 1 cut(s) 5282
EcoRI GAATTC 2 cut(s) 1567, 7190
EcoRV GATATC 2 cut(s) 1124, 1479
EcoT22I ATGCAT 5 cut(s) 4374, 5623, 5767, 6031, 6642
EcoT38I GRGCYC 4 cut(s) 72, 231, 2726, 3015
Esp3I CGTCTC 3 cut(s) 444, 2300, 5654
FalI AAGNNNNNCTT 8 cut(s) 4842, 4874, 5382, 5414, 6878, 6910, 6984, 7016
FaqI GGGAC 9 cut(s) 163, 2638, 2901, 3517, 5152, 6048, 6607, 7306, 7328
FauI CCCGC 5 cut(s) 38, 118, 402, 1955, 4621
FauNDI CATATG 2 cut(s) 1989, 2922
FbaI TGATCA 5 cut(s) 553, 1081, 1996, 2179, 3784
FblI GTMKAC 1 cut(s) 6741
FriOI GRGCYC 4 cut(s) 72, 231, 2726, 3015
GlaI GCGC 9 cut(s) 100, 290, 292, 2358, 3572, 4627, 4748, 6634, 7524
GsaI CCCAGC 1 cut(s) 2659
GsuI CTGGAG 2 cut(s) 116, 2805
HapII CCGG 8 cut(s) 153, 197, 527, 3358, 3485, 3760, 4666, 7018
HgaI GACGC 4 cut(s) 254, 1739, 2282, 6482
HhaI GCGC 9 cut(s) 101, 291, 293, 2359, 3573, 4628, 4749, 6635, 7525
Hin1I GRCGYC 2 cut(s) 246, 7435
Hin6I GCGC 9 cut(s) 99, 289, 291, 2357, 3571, 4626, 4747, 6633, 7523
HinP1I GCGC 9 cut(s) 99, 289, 291, 2357, 3571, 4626, 4747, 6633, 7523
HincII GTYRAC 4 cut(s) 3046, 3757, 6406, 7392
HindII GTYRAC 4 cut(s) 3046, 3757, 6406, 7392
HindIII AAGCTT 5 cut(s) 4473, 4679, 4722, 5705, 6941
HpaII CCGG 8 cut(s) 153, 197, 527, 3358, 3485, 3760, 4666, 7018
Hpy99I CGWCG 3 cut(s) 227, 245, 248
Hsp92I GRCGYC 2 cut(s) 246, 7435
HspAI GCGC 9 cut(s) 99, 289, 291, 2357, 3571, 4626, 4747, 6633, 7523
KroI GCCGGC 1 cut(s) 4665
KroNI GCCGGC 1 cut(s) 4667
Ksp22I TGATCA 5 cut(s) 553, 1081, 1996, 2179, 3784
LguI GCTCTTC 3 cut(s) 399, 3580, 6099
MabI ACCWGGT 1 cut(s) 7317
MbiI CCGCTC 2 cut(s) 409, 1676
MfeI CAATTG 6 cut(s) 1758, 2241, 3132, 3255, 5606, 6147
MflI RGATCY 8 cut(s) 898, 1073, 3331, 4555, 4693, 6299, 6571, 7046
MlsI TGGCCA 3 cut(s) 695, 3465, 6462
MluNI TGGCCA 3 cut(s) 695, 3465, 6462
MlyI GAGTC 8 cut(s) 523, 607, 2867, 3962, 4745, 5236, 5933, 7100
MmeI TCCRAC 3 cut(s) 480, 620, 6853
Mox20I TGGCCA 3 cut(s) 695, 3465, 6462
Mph1103I ATGCAT 5 cut(s) 4374, 5623, 5767, 6031, 6642
MroNI GCCGGC 1 cut(s) 4665
MroXI GAANNNNTTC 4 cut(s) 2901, 5299, 5397, 5460
MscI TGGCCA 3 cut(s) 695, 3465, 6462
MslI CAYNNNNRTG 8 cut(s) 701, 783, 1961, 1992, 4930, 6468, 6897, 7518
Msp20I TGGCCA 3 cut(s) 695, 3465, 6462
MspA1I CMGCKG 9 cut(s) 1835, 1874, 3377, 4419, 4524, 6179, 6716, 7205, 7264
MspI CCGG 8 cut(s) 153, 197, 527, 3358, 3485, 3760, 4666, 7018
MunI CAATTG 6 cut(s) 1758, 2241, 3132, 3255, 5606, 6147
Mva1269I GAATGC 4 cut(s) 5623, 6031, 7448, 7525
MvnI CGCG 7 cut(s) 99, 291, 835, 3571, 4628, 4749, 6075
NaeI GCCGGC 1 cut(s) 4667
NciI CCSGG 4 cut(s) 197, 3359, 7018, 7019
NcoI CCATGG 5 cut(s) 1350, 3466, 4776, 4931, 5340
NdeI CATATG 2 cut(s) 1989, 2922
NgoMIV GCCGGC 1 cut(s) 4665
NheI GCTAGC 1 cut(s) 1301
NlaIV GGNNCC 9 cut(s) 179, 2725, 3747, 3800, 6015, 6595, 7069, 7294, 7316
NmeAIII GCCGAG 4 cut(s) 36, 319, 4858, 5666
NmuCI GTSAC 4 cut(s) 155, 3260, 4436, 6946
NsiI ATGCAT 5 cut(s) 4374, 5623, 5767, 6031, 6642
NspV TTCGAA 1 cut(s) 402
PaeI GCATGC 3 cut(s) 1753, 2386, 7517
PagI TCATGA 2 cut(s) 1956, 3289
PaqCI CACCTGC 2 cut(s) 1248, 4434
PauI GCGCGC 1 cut(s) 289
PciI ACATGT 3 cut(s) 1206, 2057, 5987
PciSI GCTCTTC 3 cut(s) 399, 3580, 6099
PcsI WCGNNNNNNNCGW 3 cut(s) 63, 123, 7372
PctI GAATGC 4 cut(s) 5623, 6031, 7448, 7525
PdiI GCCGGC 1 cut(s) 4667
PdmI GAANNNNTTC 4 cut(s) 2901, 5299, 5397, 5460
PflFI GACNNNGTC 2 cut(s) 6803, 7319
PflMI CCANNNNNTGG 5 cut(s) 1356, 2733, 2884, 3461, 7324
PfoI TCCNGGA 2 cut(s) 2701, 5352
PinAI ACCGGT 1 cut(s) 3759
Ple19I CGATCG 1 cut(s) 4186
PleI GAGTC 8 cut(s) 522, 606, 2867, 3961, 4745, 5236, 5932, 7100
PpsI GAGTC 8 cut(s) 522, 606, 2867, 3961, 4745, 5236, 5932, 7100
Ppu21I YACGTR 3 cut(s) 2088, 2351, 2730
PpuMI RGGWCCY 1 cut(s) 2588
PscI ACATGT 3 cut(s) 1206, 2057, 5987
PshAI GACNNNNGTC 1 cut(s) 140
PshBI ATTAAT 1 cut(s) 7338
Psp124BI GAGCTC 2 cut(s) 231, 3015
Psp5II RGGWCCY 1 cut(s) 2588
PspEI GGTNACC 1 cut(s) 5282
PspFI CCCAGC 1 cut(s) 2655
PspN4I GGNNCC 9 cut(s) 179, 2725, 3747, 3800, 6015, 6595, 7069, 7294, 7316
PspPPI RGGWCCY 1 cut(s) 2588
PstI CTGCAG 8 cut(s) 975, 1384, 1917, 2443, 4662, 4693, 6247, 6721
PstNI CAGNNNCTG 1 cut(s) 6436
PsuI RGATCY 8 cut(s) 898, 1073, 3331, 4555, 4693, 6299, 6571, 7046
PsyI GACNNNGTC 2 cut(s) 6803, 7319
PteI GCGCGC 1 cut(s) 289
PvuI CGATCG 1 cut(s) 4186
PvuII CAGCTG 8 cut(s) 1835, 3377, 4419, 4524, 6179, 6716, 7205, 7264
RseI CAYNNNNRTG 8 cut(s) 701, 783, 1961, 1992, 4930, 6468, 6897, 7518
SacI GAGCTC 2 cut(s) 231, 3015
SapI GCTCTTC 3 cut(s) 399, 3580, 6099
SchI GAGTC 8 cut(s) 523, 607, 2867, 3962, 4745, 5236, 5933, 7100
SexAI ACCWGGT 1 cut(s) 7317
SfuI TTCGAA 1 cut(s) 402
SmaI CCCGGG 1 cut(s) 7019
SmiMI CAYNNNNRTG 8 cut(s) 701, 783, 1961, 1992, 4930, 6468, 6897, 7518
SmlI CTYRAG 8 cut(s) 592, 905, 2135, 2676, 2783, 4361, 4979, 6131
SmoI CTYRAG 8 cut(s) 592, 905, 2135, 2676, 2783, 4361, 4979, 6131
SpeI ACTAGT 2 cut(s) 3143, 4304
SphI GCATGC 3 cut(s) 1753, 2386, 7517
SspI AATATT 1 cut(s) 1309
SstI GAGCTC 2 cut(s) 231, 3015
TatI WGTACW 9 cut(s) 646, 766, 2548, 3690, 4132, 5590, 5668, 6102, 7531
TauI GCSGC 4 cut(s) 41, 1349, 2953, 5718
TseFI GTSAC 4 cut(s) 155, 3260, 4436, 6946
Tsp45I GTSAC 4 cut(s) 155, 3260, 4436, 6946
TspGWI ACGGA 2 cut(s) 1261, 3093
TspMI CCCGGG 1 cut(s) 7017
Tth111I GACNNNGTC 2 cut(s) 6803, 7319
Van91I CCANNNNNTGG 5 cut(s) 1356, 2733, 2884, 3461, 7324
VneI GTGCAC 3 cut(s) 2420, 5169, 6213
VspI ATTAAT 1 cut(s) 7338
XagI CCTNNNNNAGG 1 cut(s) 1783
XapI RAATTY 7 cut(s) 1092, 1567, 1721, 5033, 6880, 7190, 7271
XbaI TCTAGA 2 cut(s) 1825, 5902
XcmI CCANNNNNNNNNTGG 2 cut(s) 4259, 6809
XmaI CCCGGG 1 cut(s) 7017
XmiI GTMKAC 1 cut(s) 6741
XmnI GAANNNNTTC 4 cut(s) 2901, 5299, 5397, 5460
ZraI GACGTC 1 cut(s) 7436
Zsp2I ATGCAT 5 cut(s) 4374, 5623, 5767, 6031, 6642
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.