Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0002118

Physical Location & Seq

Genomic Coordinates Reverse (-)

54262445 .. 54270477

Gene Structure 8033 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0396500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2232 bp

ATGCTGCCGATGAGGAATGTCTTTGCCACTGTCAAGCTTCACCGCCATGCCACTCTCCTCTCCCAAACTCTATGCCATGAAATTTATGTGGAGACCATAATACAGAAATGCATACCTTTGGGATGCCACAAGTTTATTGAAATTGGATGGAAACAACACAAACACAATGGGTCTCCATATTACTGGCTACAACGACATTCTTTTTCCACGGGTTTCACCAGCGTGCACGGTGAGAGTCCGTCCGCCGAATATGCAAAGTTGAGGAAGGAGTCACTAGAAAGTGAATTTGGACATGCTCTTGGAGCTAATCGCTCCAGAAGTTTTTCTGCTGCCTACCGTTTTGGTCCATTTTTGGCTTTGTATAGAGCAGCAATTATTTCGTTTCATGTGTTGAAGCTAACAATCTGGCAATTTTTTGTTCAAGACATAAGGAAACGTGCCATCAAGTTTCGTGAAACTCTTATCCGCTTGGGACCTTTCTATATCAAGCTTGGTCAGGCTTTGAGCACTAGGCCAGATATACTACCAACTCAATACTGCCAAGAGCTTGTTAAGTTACAGGATCAAATACCCCCATTTCCAACCCCTGTAGCTATTAAATCTATTGAATCCCAGCTTGGAGTTCGTGTTTCAGACATTTTTGCTGATATTAGCCCACAGCCTGTTGCTGCAGCATCCCTAGGGCAGTTTGCAGCTCACCTGCACTCTGGGGAGCTGGTAGCTGTTAAAGTACAAAGGCCTGGCATGTCACTTTCATTGACCCTTGATGCCTTGTTATTCCATATGATTGGGGGCCAATTAAAGCGATTTGCCAAGGCCCGCAAAGATCTATTAGTGGCAGTGAATGAGATGGTGAGGCACATGTTTGATGAAATTGATTACATTCTAGAGGCAAAAAATGCTGAACGTTTTGCTTCTCTCTATGCTTCACATCCACGTGACGAGAAAAAGGATTATCCAAATGCTACAGCTGGGAAAACTCGTAGACATAAAGAGGCAAACTGTATAAAAGTGCCAAAAATATATTGGGACCTTACCCGTAGGGCAGTGCTGACAATGGAGTGGATTGATGGAATAAAGCTTACAGATGAAATTGGCCTAAAGACGGCCTTTCTGAACAGAAAAGAACTCATTGACCAGGGATTATACTGTTCTTTGAGACAACTGCTTGAGGTGGGATTCTTCCATGCTGACCCACATCCTGGTAATCTTGTTGCCACTGATAGTGGTGCTCTTGCATATTTTGATTTTGGAATGATGGGTGATATTCCGCGACATTATCGCGTGGGGCTTATTCAAATGCTTGTGCACTTTGTTAATCGTGACTCTCTGGGTTTGGCAAATGACTTTCTTTCTTTGGGATTTATTCCTGAAGGGGTTGATATACAACCAGTTGCAGATGCAATGAAAGCATCCTTTAGTGACAGGAACAGACAATCTCAAGATTTTCAGGGAATAATGGACCAACTATACAATATTATGTATGAATTCAACTTCTCTCTTCCTCCGGACTATGCCCTGGTGATAAGGGCTCTGGGATCACTAGAAGGCACGGCCAAAGTTCTGGATCCTGATTTCAAAGTTGTTGAGAGTGCATATCCTTTTGTGGTTGGAAGACTTTTGGCTGACCCAAATCCTGATATGAGAAGAATTTTAAGAGAACTTCTCATACGCAGTGATGGATCCATAAGGTGGAATAGGCTAGAACGCCTGATTGCAGCAATATCTGAACAGGCTTCTGAGTCTGTTAGAGAGTCCCTTAATTCGGAGGAGAGTAGTACTCCTAATCCTTTGAGAAGGAAATCATTTGACATGCATGCTGTTGTTGCCGCCACTGAAGATCTTTTACACTTCATTCTCTCTGCGAAGGGTCAAAGGGTACGTGTATTCCTTGTTCGGGATATAATTGGTGCAGCTGATGCTTTTTTTCAGGATGAAGTTGTTGGTAACATGTTCAATGACAATCCCGAAGCCAGAGACACACTTGACTCAGAGGGACATACCATGCTCGTGAGGGTGGTAAATGGGTTTCACTATTTCAGTCAAGCTGTAAAGTTGGCCCCAGAGGTGTGGACAGCAATGCTTATACGCGTGGCGTTTACACCAGAGGTTCATAGGTTTACTTTAGATATCTTTTCGTCGCTACTCATTCATTTTAGTGGCAAAATCCCAGAAACTACTTTCATTTCTCTATCTAGACTTATGCACAAGTTGGTAAAAAACCGCAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006970 GO:0008150 GO:0009266 GO:0009408 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010035 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0033554 GO:0034605 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

743

Amino Acids

84.25

Weight (kDa)

8.83

Isoelectric Point (pI)

41.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC1	PF03109	185 - 447	5.2e-66	ABC1 atypical kinase-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0002118)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G25580
fragaria_vesca	FvH4_2g30480 FvH4_2g30480 FvH4_2g30480
malus_domestica	MD08G1131900.v1.1
prunus_persica	Prupe.1G464000_v2.0.a1
pyrus_communis	pycom08g11050 pycom10g20470
rosa_chinensis	RchiOBHm_Chr2g0098451 RchiOBHm_Chr3g0485791 RchiOBHm_Chr6g0279171 RchiOBHm_Chr6g0312561
rosa_laevigata	RLG00000010046 RLG00000010316 RLG00000022980 RLG00000034454
rosa_multiflora	Rmu_sc0003094.1_g000011 Rmu_sc0008363.1_g000006
rosa_roxburghii	Rroxscaffold_1G00034380 Rroxscaffold_2G00107370 Rroxscaffold_3G00241050 Rroxscaffold_3G00241960 Rroxscaffold_6G00414860 Rroxscaffold_7G00156690 Rroxscaffold_7G00189060
rosa_rugosa	Rorug01G0191100 Rorug04G0105900 Rorug06G0123300 Rorug06G0197300 Rorug06G0215800 Rorug06G0396500
rosa_samantha	Rh1BG106100 Rh1DG070000 Rh2CG403200 Rh3CG093200 Rh4BG061300 Rh5CG484500 Rh6AG514100 Rh6CG530800 Rh6DG516400 Rh7DG190800
rosa_wichuraiana	Rw1G001170 Rw2G026220 Rw6G044670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	708
Acc36I	ACCTGC	1 cut(s)	708
AccB7I	CCANNNNNTGG	2 cut(s)	1202, 1692
AccI	GTMKAC	1 cut(s)	985
AccII	CGCG	3 cut(s)	1273, 1284, 2091
AccIII	TCCGGA	1 cut(s)	1507
AciI	CCGC	7 cut(s)	43, 243, 466, 820, 1271, 1830, 2224
AclI	AACGTT	1 cut(s)	907
AclWI	GGATC	6 cut(s)	570, 1546, 1562, 1575, 1677, 1690
AcoI	YGGCCR	1 cut(s)	1554
AcsI	RAATTY	4 cut(s)	81, 284, 1487, 1650
AcuI	CTGAAG	2 cut(s)	1392, 1857
AcvI	CACGTG	1 cut(s)	938
AfaI	GTAC	3 cut(s)	732, 1780, 1881
AfiI	CCNNNNNNNGG	5 cut(s)	1105, 1202, 1692, 1765, 1897
AflIII	ACRYGT	4 cut(s)	861, 1882, 1950, 2089
AgsI	TTSAA	8 cut(s)	140, 394, 422, 608, 1298, 1492, 1579, 1957
AjnI	CCWGG	4 cut(s)	739, 1137, 1201, 1518
AjuI	GAANNNNNNNTTGG	4 cut(s)	270, 302, 600, 632
AleI	CACNNNNGTG	1 cut(s)	221
Alw21I	GWGCWC	4 cut(s)	228, 509, 1234, 1311
Alw26I	GTCTC	4 cut(s)	86, 177, 1153, 1971
Alw44I	GTGCAC	2 cut(s)	224, 1307
AlwI	GGATC	6 cut(s)	570, 1546, 1562, 1575, 1677, 1690
Aor13HI	TCCGGA	1 cut(s)	1507
AoxI	GGCC	8 cut(s)	512, 737, 793, 816, 1096, 1107, 1554, 2058
ApaLI	GTGCAC	2 cut(s)	224, 1307
ApeKI	GCWGC	9 cut(s)	4, 329, 368, 668, 671, 692, 1718, 1913, 2226
ApoI	RAATTY	4 cut(s)	81, 284, 1487, 1650
Asp700I	GAANNNNTTC	1 cut(s)	322
AspA2I	CCTAGG	1 cut(s)	679
AspS9I	GGNCC	7 cut(s)	344, 473, 793, 817, 1030, 1462, 2059
AsuHPI	GGTGA	7 cut(s)	32, 208, 242, 689, 865, 1274, 1534
AvaII	GGWCC	4 cut(s)	344, 473, 1030, 1462
AvrII	CCTAGG	1 cut(s)	679
BaeGI	GKGCMC	2 cut(s)	228, 1311
BamHI	GGATCC	2 cut(s)	1567, 1682
BanII	GRGCYC	1 cut(s)	1534
BarI	GAAGNNNNNNTAC	2 cut(s)	1830, 1862
BauI	CACGAG	1 cut(s)	2009
BbrPI	CACGTG	1 cut(s)	938
BbsI	GAAGAC	1 cut(s)	1621
Bbv12I	GWGCWC	4 cut(s)	228, 509, 1234, 1311
BbvI	GCAGC	7 cut(s)	316, 380, 655, 683, 704, 1730, 1925
BccI	CCATC	6 cut(s)	141, 449, 844, 1064, 1252, 1673
BceAI	ACGGC	2 cut(s)	1122, 1569
BcgI	CGANNNNNNTGC	2 cut(s)	360, 394
BciT130I	CCWGG	4 cut(s)	741, 1139, 1203, 1520
BcoDI	GTCTC	4 cut(s)	86, 177, 1153, 1971
BfaI	CTAG	7 cut(s)	275, 510, 680, 887, 1544, 1703, 2196
BfmI	CTRYAG	3 cut(s)	588, 669, 966
BfuAI	ACCTGC	1 cut(s)	708
BglII	AGATCT	2 cut(s)	826, 1840
BlnI	CCTAGG	1 cut(s)	679
BmcAI	AGTACT	1 cut(s)	1780
Bme1390I	CCNGG	4 cut(s)	741, 1139, 1203, 1520
Bme18I	GGWCC	4 cut(s)	344, 473, 1030, 1462
BmgT120I	GGNCC	7 cut(s)	344, 473, 793, 817, 1030, 1462, 2059
BmiI	GGNNCC	6 cut(s)	474, 794, 1031, 1569, 1684, 2061
BmrFI	CCNGG	4 cut(s)	741, 1139, 1203, 1520
BmsI	GCATC	6 cut(s)	113, 683, 757, 1390, 1421, 1909
BpiI	GAAGAC	1 cut(s)	1621
BplI	GAGNNNNNCTC	4 cut(s)	1650, 1682, 1765, 1797
BpmI	CTGGAG	1 cut(s)	298
BpuEI	CTTGAG	2 cut(s)	1190, 1425
BsaAI	YACGTR	2 cut(s)	938, 1883
BsaI	GGTCTC	2 cut(s)	86, 177
BsaJI	CCNNGG	5 cut(s)	207, 679, 813, 1138, 1518
BsaWI	WCCGGW	1 cut(s)	1507
BsaXI	ACNNNNNCTCC	2 cut(s)	612, 642
Bsc4I	CCNNNNNNNGG	5 cut(s)	1105, 1202, 1692, 1765, 1897
Bse1I	ACTGG	2 cut(s)	188, 1391
Bse3DI	GCAATG	2 cut(s)	1410, 2085
BseAI	TCCGGA	1 cut(s)	1507
BseBI	CCWGG	4 cut(s)	741, 1139, 1203, 1520
BseDI	CCNNGG	5 cut(s)	207, 679, 813, 1138, 1518
BseGI	GGATG	7 cut(s)	128, 152, 674, 931, 1198, 1412, 1939
BseLI	CCNNNNNNNGG	5 cut(s)	1105, 1202, 1692, 1765, 1897
BseMI	GCAATG	2 cut(s)	1410, 2085
BseMII	CTCAG	2 cut(s)	1731, 2004
BseNI	ACTGG	2 cut(s)	188, 1391
BseRI	GAGGAG	2 cut(s)	47, 1784
BseSI	GKGCMC	2 cut(s)	228, 1311
BseXI	GCAGC	7 cut(s)	316, 380, 655, 683, 704, 1730, 1925
BseYI	CCCAGC	2 cut(s)	612, 971
BsgI	GTGCAG	2 cut(s)	686, 1932
Bsh1236I	CGCG	3 cut(s)	1273, 1284, 2091
BshFI	GGCC	8 cut(s)	514, 739, 795, 818, 1098, 1109, 1556, 2060
BsiHKAI	GWGCWC	4 cut(s)	228, 509, 1234, 1311
BsiSI	CCGG	1 cut(s)	1508
BslFI	GGGAC	4 cut(s)	486, 1043, 1741, 2010
BslI	CCNNNNNNNGG	5 cut(s)	1105, 1202, 1692, 1765, 1897
BsmAI	GTCTC	4 cut(s)	86, 177, 1153, 1971
BsmFI	GGGAC	4 cut(s)	486, 1043, 1741, 2010
BsnI	GGCC	8 cut(s)	514, 739, 795, 818, 1098, 1109, 1556, 2060
Bso31I	GGTCTC	2 cut(s)	86, 177
Bsp1286I	GDGCHC	5 cut(s)	228, 509, 1234, 1311, 1534
Bsp13I	TCCGGA	1 cut(s)	1507
Bsp143I	GATC	6 cut(s)	562, 826, 1538, 1567, 1682, 1840
BspACI	CCGC	7 cut(s)	43, 243, 466, 820, 1271, 1830, 2224
BspANI	GGCC	8 cut(s)	514, 739, 795, 818, 1098, 1109, 1556, 2060
BspCNI	CTCAG	2 cut(s)	1732, 2003
BspEI	TCCGGA	1 cut(s)	1507
BspFNI	CGCG	3 cut(s)	1273, 1284, 2091
BspLI	GGNNCC	6 cut(s)	474, 794, 1031, 1569, 1684, 2061
BspMAI	CTGCAG	1 cut(s)	673
BspMI	ACCTGC	1 cut(s)	708
BspPI	GGATC	6 cut(s)	570, 1546, 1562, 1575, 1677, 1690
BspTNI	GGTCTC	2 cut(s)	86, 177
BsrDI	GCAATG	2 cut(s)	1410, 2085
BsrI	ACTGG	2 cut(s)	188, 1391
BssECI	CCNNGG	5 cut(s)	207, 679, 813, 1138, 1518
BssMI	GATC	6 cut(s)	562, 826, 1538, 1567, 1682, 1840
BssSI	CACGAG	1 cut(s)	2009
BssT1I	CCWWGG	2 cut(s)	679, 813
Bst2BI	CACGAG	1 cut(s)	2009
Bst2UI	CCWGG	4 cut(s)	741, 1139, 1203, 1520
Bst4CI	ACNGT	5 cut(s)	31, 230, 338, 1004, 1151
Bst6I	CTCTTC	1 cut(s)	1506
BstAPI	GCANNNNNTGC	2 cut(s)	899, 1919
BstBAI	YACGTR	2 cut(s)	938, 1883
BstC8I	GCNNGC	3 cut(s)	224, 820, 1818
BstDEI	CTNAG	2 cut(s)	1740, 1990
BstDSI	CCRYGG	1 cut(s)	207
BstF5I	GGATG	7 cut(s)	128, 152, 674, 931, 1198, 1412, 1939
BstFNI	CGCG	3 cut(s)	1273, 1284, 2091
BstKTI	GATC	6 cut(s)	565, 829, 1541, 1570, 1685, 1843
BstMAI	GTCTC	4 cut(s)	86, 177, 1153, 1971
BstMBI	GATC	6 cut(s)	562, 826, 1538, 1567, 1682, 1840
BstMWI	GCNNNNNNNGC	6 cut(s)	251, 302, 899, 1409, 1826, 1919
BstNI	CCWGG	4 cut(s)	741, 1139, 1203, 1520
BstNSI	RCATGY	6 cut(s)	296, 748, 865, 1816, 1820, 1954
BstSCI	CCNGG	4 cut(s)	739, 1137, 1201, 1518
BstSFI	CTRYAG	3 cut(s)	588, 669, 966
BstSLI	GKGCMC	2 cut(s)	228, 1311
BstUI	CGCG	3 cut(s)	1273, 1284, 2091
BstV1I	GCAGC	7 cut(s)	316, 380, 655, 683, 704, 1730, 1925
BstV2I	GAAGAC	1 cut(s)	1621
BstX2I	RGATCY	4 cut(s)	826, 1567, 1682, 1840
BstXI	CCANNNNNNTGG	4 cut(s)	183, 788, 1564, 2070
BstYI	RGATCY	4 cut(s)	826, 1567, 1682, 1840
BsuRI	GGCC	8 cut(s)	514, 739, 795, 818, 1098, 1109, 1556, 2060
BtgI	CCRYGG	1 cut(s)	207
BtsCI	GGATG	7 cut(s)	128, 152, 674, 931, 1198, 1412, 1939
BtsI	GCAGTG	3 cut(s)	846, 1053, 1681
BtsIMutI	CAGTG	6 cut(s)	27, 846, 1053, 1218, 1681, 1833
BveI	ACCTGC	1 cut(s)	708
Cac8I	GCNNGC	3 cut(s)	224, 820, 1818
Cfr13I	GGNCC	7 cut(s)	344, 473, 793, 817, 1030, 1462, 2059
Csp6I	GTAC	3 cut(s)	731, 1779, 1880
CviQI	GTAC	3 cut(s)	731, 1779, 1880
DdeI	CTNAG	2 cut(s)	1740, 1990
DpnI	GATC	6 cut(s)	564, 828, 1540, 1569, 1684, 1842
DpnII	GATC	6 cut(s)	562, 826, 1538, 1567, 1682, 1840
EaeI	YGGCCR	1 cut(s)	1554
Eam1104I	CTCTTC	1 cut(s)	1506
EarI	CTCTTC	1 cut(s)	1506
EciI	GGCGGA	1 cut(s)	232
Eco130I	CCWWGG	2 cut(s)	679, 813
Eco147I	AGGCCT	1 cut(s)	739
Eco24I	GRGCYC	1 cut(s)	1534
Eco31I	GGTCTC	2 cut(s)	86, 177
Eco32I	GATATC	1 cut(s)	2131
Eco47I	GGWCC	4 cut(s)	344, 473, 1030, 1462
Eco57I	CTGAAG	2 cut(s)	1392, 1857
Eco72I	CACGTG	1 cut(s)	938
EcoO109I	RGGNCCY	2 cut(s)	473, 1030
EcoRI	GAATTC	1 cut(s)	1487
EcoRII	CCWGG	4 cut(s)	739, 1137, 1201, 1518
EcoRV	GATATC	1 cut(s)	2131
EcoT14I	CCWWGG	2 cut(s)	679, 813
EcoT22I	ATGCAT	2 cut(s)	113, 1818
EcoT38I	GRGCYC	1 cut(s)	1534
ErhI	CCWWGG	2 cut(s)	679, 813
FalI	AAGNNNNNCTT	2 cut(s)	1094, 1126
FaqI	GGGAC	4 cut(s)	486, 1043, 1741, 2010
FauI	CCCGC	1 cut(s)	827
FauNDI	CATATG	1 cut(s)	783
FblI	GTMKAC	1 cut(s)	985
FokI	GGATG	7 cut(s)	135, 159, 661, 918, 1185, 1399, 1946
FriOI	GRGCYC	1 cut(s)	1534
FspBI	CTAG	7 cut(s)	275, 510, 680, 887, 1544, 1703, 2196
GsaI	CCCAGC	2 cut(s)	616, 975
GsuI	CTGGAG	1 cut(s)	298
HaeIII	GGCC	8 cut(s)	514, 739, 795, 818, 1098, 1109, 1556, 2060
HapII	CCGG	1 cut(s)	1508
HindIII	AAGCTT	3 cut(s)	35, 488, 1079
HinfI	GANTC	8 cut(s)	235, 269, 608, 1179, 1325, 1742, 1754, 1988
HpaII	CCGG	1 cut(s)	1508
HphI	GGTGA	7 cut(s)	32, 208, 242, 689, 865, 1274, 1534
Hpy166II	GTNNAC	6 cut(s)	226, 986, 1309, 2073, 2100, 2121
Hpy188I	TCNGA	6 cut(s)	634, 1116, 1729, 1741, 1768, 1993
Hpy8I	GTNNAC	6 cut(s)	226, 986, 1309, 2073, 2100, 2121
Hpy99I	CGWCG	1 cut(s)	2143
HpyAV	CCTTC	5 cut(s)	259, 1367, 1541, 1791, 1861
HpyCH4III	ACNGT	5 cut(s)	31, 230, 338, 1004, 1151
HpyCH4IV	ACGT	4 cut(s)	436, 907, 937, 1882
HpyF10VI	GCNNNNNNNGC	6 cut(s)	251, 302, 899, 1409, 1826, 1919
HpyF3I	CTNAG	2 cut(s)	1740, 1990
HpySE526I	ACGT	4 cut(s)	436, 907, 937, 1882
Kpn2I	TCCGGA	1 cut(s)	1507
Kzo9I	GATC	6 cut(s)	562, 826, 1538, 1567, 1682, 1840
LmnI	GCTCC	3 cut(s)	302, 317, 712
Lsp1109I	GCAGC	7 cut(s)	316, 380, 655, 683, 704, 1730, 1925
LweI	GCATC	6 cut(s)	113, 683, 757, 1390, 1421, 1909
MaeI	CTAG	7 cut(s)	275, 510, 680, 887, 1544, 1703, 2196
MaeII	ACGT	4 cut(s)	436, 907, 937, 1882
MaeIII	GTNAC	7 cut(s)	270, 555, 747, 938, 1322, 1421, 1946
MalI	GATC	6 cut(s)	564, 828, 1540, 1569, 1684, 1842
MboI	GATC	6 cut(s)	562, 826, 1538, 1567, 1682, 1840
MboII	GAAGA	5 cut(s)	1174, 1493, 1626, 1659, 1850
MflI	RGATCY	4 cut(s)	826, 1567, 1682, 1840
MhlI	GDGCHC	5 cut(s)	228, 509, 1234, 1311, 1534
MluI	ACGCGT	1 cut(s)	2089
MlyI	GAGTC	6 cut(s)	244, 278, 1319, 1751, 1763, 1982
MmeI	TCCRAC	2 cut(s)	605, 1591
Mph1103I	ATGCAT	2 cut(s)	113, 1818
MroI	TCCGGA	1 cut(s)	1507
MroXI	GAANNNNTTC	1 cut(s)	322
MseI	TTAA	7 cut(s)	552, 597, 726, 800, 1317, 1655, 1761
MslI	CAYNNNNRTG	5 cut(s)	45, 221, 936, 2009, 2157
MspA1I	CMGCKG	2 cut(s)	971, 1916
MspI	CCGG	1 cut(s)	1508
MspR9I	CCNGG	4 cut(s)	741, 1139, 1203, 1520
MvaI	CCWGG	4 cut(s)	741, 1139, 1203, 1520
MvnI	CGCG	3 cut(s)	1273, 1284, 2091
MwoI	GCNNNNNNNGC	6 cut(s)	251, 302, 899, 1409, 1826, 1919
NdeI	CATATG	1 cut(s)	783
NdeII	GATC	6 cut(s)	562, 826, 1538, 1567, 1682, 1840
NlaIV	GGNNCC	6 cut(s)	474, 794, 1031, 1569, 1684, 2061
NmuCI	GTSAC	5 cut(s)	270, 747, 938, 1322, 1421
NsiI	ATGCAT	2 cut(s)	113, 1818
NspI	RCATGY	6 cut(s)	296, 748, 865, 1816, 1820, 1954
OliI	CACNNNNGTG	1 cut(s)	221
PaeI	GCATGC	1 cut(s)	1820
PaqCI	CACCTGC	1 cut(s)	708
PceI	AGGCCT	1 cut(s)	739
PciI	ACATGT	2 cut(s)	861, 1950
PdmI	GAANNNNTTC	1 cut(s)	322
PfeI	GAWTC	2 cut(s)	608, 1179
PflMI	CCANNNNNTGG	2 cut(s)	1202, 1692
PleI	GAGTC	6 cut(s)	243, 277, 1319, 1750, 1762, 1982
PmaCI	CACGTG	1 cut(s)	938
PmlI	CACGTG	1 cut(s)	938
PpsI	GAGTC	6 cut(s)	243, 277, 1319, 1750, 1762, 1982
Ppu21I	YACGTR	2 cut(s)	938, 1883
PpuMI	RGGWCCY	2 cut(s)	473, 1030
PscI	ACATGT	2 cut(s)	861, 1950
Psp1406I	AACGTT	1 cut(s)	907
Psp5II	RGGWCCY	2 cut(s)	473, 1030
Psp6I	CCWGG	4 cut(s)	739, 1137, 1201, 1518
PspCI	CACGTG	1 cut(s)	938
PspFI	CCCAGC	2 cut(s)	612, 971
PspGI	CCWGG	4 cut(s)	739, 1137, 1201, 1518
PspN4I	GGNNCC	6 cut(s)	474, 794, 1031, 1569, 1684, 2061
PspPI	GGNCC	7 cut(s)	344, 473, 793, 817, 1030, 1462, 2059
PspPPI	RGGWCCY	2 cut(s)	473, 1030
PsrI	GAACNNNNNNTAC	4 cut(s)	1653, 1685, 1878, 1910
PstI	CTGCAG	1 cut(s)	673
PsuI	RGATCY	4 cut(s)	826, 1567, 1682, 1840
PvuII	CAGCTG	2 cut(s)	971, 1916
RsaI	GTAC	3 cut(s)	732, 1780, 1881
RsaNI	GTAC	3 cut(s)	731, 1779, 1880
RseI	CAYNNNNRTG	5 cut(s)	45, 221, 936, 2009, 2157
SaqAI	TTAA	7 cut(s)	552, 597, 726, 800, 1317, 1655, 1761
Sau3AI	GATC	6 cut(s)	562, 826, 1538, 1567, 1682, 1840
Sau96I	GGNCC	7 cut(s)	344, 473, 793, 817, 1030, 1462, 2059
ScaI	AGTACT	1 cut(s)	1780
SchI	GAGTC	6 cut(s)	244, 278, 1319, 1751, 1763, 1982
ScrFI	CCNGG	4 cut(s)	741, 1139, 1203, 1520
SduI	GDGCHC	5 cut(s)	228, 509, 1234, 1311, 1534
SfaNI	GCATC	6 cut(s)	113, 683, 757, 1390, 1421, 1909
SfcI	CTRYAG	3 cut(s)	588, 669, 966
SinI	GGWCC	4 cut(s)	344, 473, 1030, 1462
SmiMI	CAYNNNNRTG	5 cut(s)	45, 221, 936, 2009, 2157
SmlI	CTYRAG	2 cut(s)	1169, 1440
SmoI	CTYRAG	2 cut(s)	1169, 1440
SphI	GCATGC	1 cut(s)	1820
SseBI	AGGCCT	1 cut(s)	739
SsiI	CCGC	7 cut(s)	43, 243, 466, 820, 1271, 1830, 2224
SspI	AATATT	1 cut(s)	1477
SspMI	CTAG	7 cut(s)	275, 510, 680, 887, 1544, 1703, 2196
StuI	AGGCCT	1 cut(s)	739
StyD4I	CCNGG	4 cut(s)	739, 1137, 1201, 1518
StyI	CCWWGG	2 cut(s)	679, 813
TaaI	ACNGT	5 cut(s)	31, 230, 338, 1004, 1151
TaiI	ACGT	4 cut(s)	439, 910, 940, 1885
TatI	WGTACW	2 cut(s)	730, 1778
TauI	GCSGC	1 cut(s)	1832
TfiI	GAWTC	2 cut(s)	608, 1179
Tru1I	TTAA	7 cut(s)	552, 597, 726, 800, 1317, 1655, 1761
Tru9I	TTAA	7 cut(s)	552, 597, 726, 800, 1317, 1655, 1761
TscAI	CASTG	6 cut(s)	34, 846, 1053, 1225, 1681, 1840
TseFI	GTSAC	5 cut(s)	270, 747, 938, 1322, 1421
TseI	GCWGC	9 cut(s)	4, 329, 368, 668, 671, 692, 1718, 1913, 2226
Tsp45I	GTSAC	5 cut(s)	270, 747, 938, 1322, 1421
TspGWI	ACGGA	1 cut(s)	228
TspRI	CASTG	6 cut(s)	34, 846, 1053, 1225, 1681, 1840
Van91I	CCANNNNNTGG	2 cut(s)	1202, 1692
VneI	GTGCAC	2 cut(s)	224, 1307
VpaK11BI	GGWCC	4 cut(s)	344, 473, 1030, 1462
XapI	RAATTY	4 cut(s)	81, 284, 1487, 1650
XbaI	TCTAGA	2 cut(s)	886, 2195
XceI	RCATGY	6 cut(s)	296, 748, 865, 1816, 1820, 1954
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1023
XmaJI	CCTAGG	1 cut(s)	679
XmiI	GTMKAC	1 cut(s)	985
XmnI	GAANNNNTTC	1 cut(s)	322
XspI	CTAG	7 cut(s)	275, 510, 680, 887, 1544, 1703, 2196
ZrmI	AGTACT	1 cut(s)	1780
Zsp2I	ATGCAT	2 cut(s)	113, 1818

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.