Autophagy-related protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 177, 1529 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 923 |
| Acc65I | GGTACC | 1 cut(s) | 1629 |
| AccB1I | GGYRCC | 1 cut(s) | 1629 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2197 |
| AccI | GTMKAC | 1 cut(s) | 1479 |
| AccII | CGCG | 2 cut(s) | 480, 2109 |
| AciI | CCGC | 9 cut(s) | 92, 239, 478, 1810, 1905, 2003, 2053, 2107, 2109 |
| AclWI | GGATC | 6 cut(s) | 413, 913, 1084, 2098, 2181, 2194 |
| AcoI | YGGCCR | 1 cut(s) | 1005 |
| AcsI | RAATTY | 5 cut(s) | 392, 2112, 2119, 2153, 2293 |
| AcuI | CTGAAG | 3 cut(s) | 776, 949, 1137 |
| AdeI | CACNNNGTG | 2 cut(s) | 1121, 1253 |
| AfaI | GTAC | 7 cut(s) | 594, 1245, 1314, 1385, 1631, 1785, 1794 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 404, 677, 1738, 2028, 2029, 2197 |
| AjnI | CCWGG | 4 cut(s) | 501, 534, 1249, 1632 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1730, 1762 |
| AluBI | AGCT | 5 cut(s) | 56, 98, 233, 1157, 1926 |
| AluI | AGCT | 5 cut(s) | 56, 98, 233, 1157, 1926 |
| Alw21I | GWGCWC | 4 cut(s) | 606, 2029, 2083, 2214 |
| Alw26I | GTCTC | 2 cut(s) | 476, 1058 |
| Alw44I | GTGCAC | 1 cut(s) | 2025 |
| AlwI | GGATC | 6 cut(s) | 413, 913, 1084, 2098, 2181, 2194 |
| AoxI | GGCC | 2 cut(s) | 1005, 1622 |
| ApaLI | GTGCAC | 1 cut(s) | 2025 |
| ApeKI | GCWGC | 4 cut(s) | 95, 242, 674, 1594 |
| ApoI | RAATTY | 5 cut(s) | 392, 2112, 2119, 2153, 2293 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 544, 1215, 1941 |
| Asp718I | GGTACC | 1 cut(s) | 1629 |
| AspLEI | GCGC | 1 cut(s) | 214 |
| AspS9I | GGNCC | 2 cut(s) | 1174, 1183 |
| AsuHPI | GGTGA | 3 cut(s) | 395, 1265, 1753 |
| AsuNHI | GCTAGC | 1 cut(s) | 98 |
| AvaII | GGWCC | 2 cut(s) | 1174, 1183 |
| AxyI | CCTNAGG | 2 cut(s) | 1080, 2163 |
| BaeGI | GKGCMC | 1 cut(s) | 2029 |
| BalI | TGGCCA | 1 cut(s) | 1007 |
| BamHI | GGATCC | 1 cut(s) | 2186 |
| BanI | GGYRCC | 1 cut(s) | 1629 |
| BbsI | GAAGAC | 4 cut(s) | 921, 955, 1236, 1867 |
| Bbv12I | GWGCWC | 4 cut(s) | 606, 2029, 2083, 2214 |
| BbvI | GCAGC | 4 cut(s) | 107, 229, 661, 1606 |
| BccI | CCATC | 8 cut(s) | 12, 193, 202, 362, 1587, 1594, 1631, 2177 |
| BceAI | ACGGC | 1 cut(s) | 340 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 503, 537 |
| BciT130I | CCWGG | 4 cut(s) | 503, 536, 1251, 1634 |
| BclI | TGATCA | 4 cut(s) | 451, 1060, 1506, 1513 |
| BcoDI | GTCTC | 2 cut(s) | 476, 1058 |
| BfaI | CTAG | 7 cut(s) | 99, 215, 225, 345, 744, 972, 1299 |
| BfmI | CTRYAG | 1 cut(s) | 1494 |
| BfoI | RGCGCY | 1 cut(s) | 215 |
| BglII | AGATCT | 1 cut(s) | 976 |
| BisI | GCNGC | 6 cut(s) | 93, 96, 240, 243, 675, 1595 |
| BlsI | GCNGC | 6 cut(s) | 94, 97, 241, 244, 676, 1596 |
| BmcAI | AGTACT | 1 cut(s) | 1314 |
| Bme1390I | CCNGG | 4 cut(s) | 503, 536, 1251, 1634 |
| Bme18I | GGWCC | 2 cut(s) | 1174, 1183 |
| BmgT120I | GGNCC | 2 cut(s) | 1174, 1183 |
| BmiI | GGNNCC | 2 cut(s) | 1631, 2188 |
| BmrFI | CCNGG | 4 cut(s) | 503, 536, 1251, 1634 |
| BmrI | ACTGGG | 1 cut(s) | 1552 |
| BmtI | GCTAGC | 1 cut(s) | 102 |
| BmuI | ACTGGG | 1 cut(s) | 1552 |
| BpiI | GAAGAC | 4 cut(s) | 921, 955, 1236, 1867 |
| BpmI | CTGGAG | 1 cut(s) | 2247 |
| BpuEI | CTTGAG | 3 cut(s) | 598, 904, 2261 |
| BsaBI | GATNNNNATC | 2 cut(s) | 732, 1919 |
| BsaI | GGTCTC | 1 cut(s) | 476 |
| BsaJI | CCNNGG | 5 cut(s) | 502, 535, 1625, 1732, 2107 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 593, 623 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 404, 677, 1738, 2028, 2029, 2197 |
| Bse1I | ACTGG | 2 cut(s) | 782, 1547 |
| Bse21I | CCTNAGG | 2 cut(s) | 1080, 2163 |
| Bse3DI | GCAATG | 4 cut(s) | 874, 946, 1110, 2135 |
| Bse8I | GATNNNNATC | 2 cut(s) | 732, 1919 |
| BseBI | CCWGG | 4 cut(s) | 503, 536, 1251, 1634 |
| BseDI | CCNNGG | 5 cut(s) | 502, 535, 1625, 1732, 2107 |
| BseJI | GATNNNNATC | 2 cut(s) | 732, 1919 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 404, 677, 1738, 2028, 2029, 2197 |
| BseMI | GCAATG | 4 cut(s) | 874, 946, 1110, 2135 |
| BseMII | CTCAG | 5 cut(s) | 306, 435, 531, 1416, 2154 |
| BseNI | ACTGG | 2 cut(s) | 782, 1547 |
| BseRI | GAGGAG | 7 cut(s) | 314, 317, 320, 323, 326, 1384, 2222 |
| BseSI | GKGCMC | 1 cut(s) | 2029 |
| BseXI | GCAGC | 4 cut(s) | 107, 229, 661, 1606 |
| BseYI | CCCAGC | 1 cut(s) | 56 |
| BsgI | GTGCAG | 1 cut(s) | 1705 |
| Bsh1236I | CGCG | 2 cut(s) | 480, 2109 |
| BshFI | GGCC | 2 cut(s) | 1007, 1624 |
| BshNI | GGYRCC | 1 cut(s) | 1629 |
| BsiHKAI | GWGCWC | 4 cut(s) | 606, 2029, 2083, 2214 |
| BsiSI | CCGG | 1 cut(s) | 2236 |
| BslFI | GGGAC | 1 cut(s) | 1559 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 404, 677, 1738, 2028, 2029, 2197 |
| BsmAI | GTCTC | 2 cut(s) | 476, 1058 |
| BsmFI | GGGAC | 1 cut(s) | 1559 |
| BsmI | GAATGC | 1 cut(s) | 1978 |
| BsnI | GGCC | 2 cut(s) | 1007, 1624 |
| Bso31I | GGTCTC | 1 cut(s) | 476 |
| Bsp1286I | GDGCHC | 4 cut(s) | 606, 2029, 2083, 2214 |
| Bsp1407I | TGTACA | 2 cut(s) | 592, 1383 |
| Bsp19I | CCATGG | 1 cut(s) | 1625 |
| BspACI | CCGC | 9 cut(s) | 92, 239, 478, 1810, 1905, 2003, 2053, 2107, 2109 |
| BspANI | GGCC | 2 cut(s) | 1007, 1624 |
| BspCNI | CTCAG | 5 cut(s) | 305, 436, 530, 1415, 2155 |
| BspFNI | CGCG | 2 cut(s) | 480, 2109 |
| BspHI | TCATGA | 1 cut(s) | 1993 |
| BspLI | GGNNCC | 2 cut(s) | 1631, 2188 |
| BspOI | GCTAGC | 1 cut(s) | 102 |
| BspPI | GGATC | 6 cut(s) | 413, 913, 1084, 2098, 2181, 2194 |
| BspT107I | GGYRCC | 1 cut(s) | 1629 |
| BspTNI | GGTCTC | 1 cut(s) | 476 |
| BsrDI | GCAATG | 4 cut(s) | 874, 946, 1110, 2135 |
| BsrGI | TGTACA | 2 cut(s) | 592, 1383 |
| BsrI | ACTGG | 2 cut(s) | 782, 1547 |
| BssECI | CCNNGG | 5 cut(s) | 502, 535, 1625, 1732, 2107 |
| BssT1I | CCWWGG | 1 cut(s) | 1625 |
| Bst2UI | CCWGG | 4 cut(s) | 503, 536, 1251, 1634 |
| Bst4CI | ACNGT | 4 cut(s) | 597, 1388, 1733, 2209 |
| Bst6I | CTCTTC | 4 cut(s) | 291, 854, 1206, 1361 |
| BstAUI | TGTACA | 2 cut(s) | 592, 1383 |
| BstC8I | GCNNGC | 4 cut(s) | 100, 672, 1108, 2203 |
| BstDEI | CTNAG | 9 cut(s) | 292, 444, 517, 1026, 1080, 1402, 1590, 1869, 2163 |
| BstDSI | CCRYGG | 3 cut(s) | 1625, 1732, 2107 |
| BstEII | GGTNACC | 1 cut(s) | 1253 |
| BstFNI | CGCG | 2 cut(s) | 480, 2109 |
| BstH2I | RGCGCY | 1 cut(s) | 215 |
| BstHHI | GCGC | 1 cut(s) | 214 |
| BstMAI | GTCTC | 2 cut(s) | 476, 1058 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 239, 563, 1004, 1112, 1621 |
| BstNI | CCWGG | 4 cut(s) | 503, 536, 1251, 1634 |
| BstNSI | RCATGY | 2 cut(s) | 1646, 2205 |
| BstPI | GGTNACC | 1 cut(s) | 1253 |
| BstSCI | CCNGG | 4 cut(s) | 501, 534, 1249, 1632 |
| BstSFI | CTRYAG | 1 cut(s) | 1494 |
| BstSLI | GKGCMC | 1 cut(s) | 2029 |
| BstUI | CGCG | 2 cut(s) | 480, 2109 |
| BstV1I | GCAGC | 4 cut(s) | 107, 229, 661, 1606 |
| BstV2I | GAAGAC | 4 cut(s) | 921, 955, 1236, 1867 |
| BstX2I | RGATCY | 4 cut(s) | 418, 976, 2103, 2186 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 56, 151, 1265 |
| BstYI | RGATCY | 4 cut(s) | 418, 976, 2103, 2186 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1080, 2163 |
| BsuRI | GGCC | 2 cut(s) | 1007, 1624 |
| BtgI | CCRYGG | 3 cut(s) | 1625, 1732, 2107 |
| BtsI | GCAGTG | 1 cut(s) | 1717 |
| BtsIMutI | CAGTG | 3 cut(s) | 775, 1393, 1717 |
| Cac8I | GCNNGC | 4 cut(s) | 100, 672, 1108, 2203 |
| CciI | TCATGA | 1 cut(s) | 1993 |
| CfoI | GCGC | 1 cut(s) | 214 |
| Cfr13I | GGNCC | 2 cut(s) | 1174, 1183 |
| Cfr42I | CCGCGG | 1 cut(s) | 2110 |
| CseI | GACGC | 1 cut(s) | 813 |
| CsiI | ACCWGGT | 1 cut(s) | 1249 |
| Csp6I | GTAC | 7 cut(s) | 593, 1244, 1313, 1384, 1630, 1784, 1793 |
| CviQI | GTAC | 7 cut(s) | 593, 1244, 1313, 1384, 1630, 1784, 1793 |
| DdeI | CTNAG | 9 cut(s) | 292, 444, 517, 1026, 1080, 1402, 1590, 1869, 2163 |
| DraIII | CACNNNGTG | 2 cut(s) | 1121, 1253 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 923 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 923 |
| EaeI | YGGCCR | 1 cut(s) | 1005 |
| Eam1104I | CTCTTC | 4 cut(s) | 291, 854, 1206, 1361 |
| EarI | CTCTTC | 4 cut(s) | 291, 854, 1206, 1361 |
| Eco130I | CCWWGG | 1 cut(s) | 1625 |
| Eco31I | GGTCTC | 1 cut(s) | 476 |
| Eco32I | GATATC | 1 cut(s) | 1609 |
| Eco47I | GGWCC | 2 cut(s) | 1174, 1183 |
| Eco57I | CTGAAG | 3 cut(s) | 776, 949, 1137 |
| Eco81I | CCTNAGG | 2 cut(s) | 1080, 2163 |
| Eco91I | GGTNACC | 1 cut(s) | 1253 |
| EcoO65I | GGTNACC | 1 cut(s) | 1253 |
| EcoRI | GAATTC | 1 cut(s) | 2112 |
| EcoRII | CCWGG | 4 cut(s) | 501, 534, 1249, 1632 |
| EcoRV | GATATC | 1 cut(s) | 1609 |
| EcoT14I | CCWWGG | 1 cut(s) | 1625 |
| EcoT22I | ATGCAT | 5 cut(s) | 568, 937, 948, 1648, 1978 |
| ErhI | CCWWGG | 1 cut(s) | 1625 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 875, 907, 1203, 1235, 1755, 1787, 1770, 1802 |
| FaqI | GGGAC | 1 cut(s) | 1559 |
| FauI | CCCGC | 1 cut(s) | 1898 |
| FbaI | TGATCA | 4 cut(s) | 451, 1060, 1506, 1513 |
| FblI | GTMKAC | 1 cut(s) | 1479 |
| Fnu4HI | GCNGC | 6 cut(s) | 93, 96, 240, 243, 675, 1595 |
| Fsp4HI | GCNGC | 6 cut(s) | 93, 96, 240, 243, 675, 1595 |
| FspBI | CTAG | 7 cut(s) | 99, 215, 225, 345, 744, 972, 1299 |
| GlaI | GCGC | 1 cut(s) | 213 |
| GluI | GCNGC | 6 cut(s) | 93, 96, 240, 243, 675, 1595 |
| GsaI | CCCAGC | 1 cut(s) | 60 |
| GsuI | CTGGAG | 1 cut(s) | 2247 |
| HaeII | RGCGCY | 1 cut(s) | 215 |
| HaeIII | GGCC | 2 cut(s) | 1007, 1624 |
| HapII | CCGG | 1 cut(s) | 2236 |
| HgaI | GACGC | 1 cut(s) | 813 |
| HhaI | GCGC | 1 cut(s) | 214 |
| Hin6I | GCGC | 1 cut(s) | 212 |
| HinP1I | GCGC | 1 cut(s) | 212 |
| HincII | GTYRAC | 2 cut(s) | 612, 1480 |
| HindII | GTYRAC | 2 cut(s) | 612, 1480 |
| HinfI | GANTC | 9 cut(s) | 140, 284, 290, 338, 491, 515, 540, 740, 917 |
| HpaI | GTTAAC | 1 cut(s) | 612 |
| HpaII | CCGG | 1 cut(s) | 2236 |
| HphI | GGTGA | 3 cut(s) | 395, 1265, 1753 |
| Hpy166II | GTNNAC | 6 cut(s) | 593, 612, 1174, 1362, 1480, 2027 |
| Hpy8I | GTNNAC | 6 cut(s) | 593, 612, 1174, 1362, 1480, 2027 |
| Hpy99I | CGWCG | 3 cut(s) | 72, 326, 332 |
| HpyAV | CCTTC | 6 cut(s) | 266, 371, 1161, 1732, 1990, 2039 |
| HpyCH4III | ACNGT | 4 cut(s) | 597, 1388, 1733, 2209 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 239, 563, 1004, 1112, 1621 |
| HpyF3I | CTNAG | 9 cut(s) | 292, 444, 517, 1026, 1080, 1402, 1590, 1869, 2163 |
| HspAI | GCGC | 1 cut(s) | 212 |
| KpnI | GGTACC | 1 cut(s) | 1633 |
| Ksp22I | TGATCA | 4 cut(s) | 451, 1060, 1506, 1513 |
| KspAI | GTTAAC | 1 cut(s) | 612 |
| KspI | CCGCGG | 1 cut(s) | 2110 |
| LmnI | GCTCC | 4 cut(s) | 601, 1371, 2005, 2266 |
| Lsp1109I | GCAGC | 4 cut(s) | 107, 229, 661, 1606 |
| MabI | ACCWGGT | 1 cut(s) | 1249 |
| MaeI | CTAG | 7 cut(s) | 99, 215, 225, 345, 744, 972, 1299 |
| MaeIII | GTNAC | 6 cut(s) | 281, 347, 383, 1253, 1301, 1965 |
| MflI | RGATCY | 4 cut(s) | 418, 976, 2103, 2186 |
| MhlI | GDGCHC | 4 cut(s) | 606, 2029, 2083, 2214 |
| MlsI | TGGCCA | 1 cut(s) | 1007 |
| MluNI | TGGCCA | 1 cut(s) | 1007 |
| MlyI | GAGTC | 5 cut(s) | 278, 284, 485, 509, 911 |
| MmeI | TCCRAC | 3 cut(s) | 537, 579, 762 |
| Mox20I | TGGCCA | 1 cut(s) | 1007 |
| Mph1103I | ATGCAT | 5 cut(s) | 568, 937, 948, 1648, 1978 |
| MroXI | GAANNNNTTC | 3 cut(s) | 544, 1215, 1941 |
| MscI | TGGCCA | 1 cut(s) | 1007 |
| MseI | TTAA | 8 cut(s) | 611, 732, 1128, 1167, 1574, 1710, 2123, 2172 |
| MslI | CAYNNNNRTG | 3 cut(s) | 571, 1521, 1998 |
| Msp20I | TGGCCA | 1 cut(s) | 1007 |
| MspA1I | CMGCKG | 2 cut(s) | 1810, 2109 |
| MspI | CCGG | 1 cut(s) | 2236 |
| MspR9I | CCNGG | 4 cut(s) | 503, 536, 1251, 1634 |
| Mva1269I | GAATGC | 1 cut(s) | 1978 |
| MvaI | CCWGG | 4 cut(s) | 503, 536, 1251, 1634 |
| MvnI | CGCG | 2 cut(s) | 480, 2109 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 239, 563, 1004, 1112, 1621 |
| NcoI | CCATGG | 1 cut(s) | 1625 |
| NheI | GCTAGC | 1 cut(s) | 98 |
| NlaIV | GGNNCC | 2 cut(s) | 1631, 2188 |
| NmuCI | GTSAC | 6 cut(s) | 281, 347, 383, 1253, 1301, 1965 |
| NsiI | ATGCAT | 5 cut(s) | 568, 937, 948, 1648, 1978 |
| NspI | RCATGY | 2 cut(s) | 1646, 2205 |
| PaeI | GCATGC | 1 cut(s) | 2205 |
| PagI | TCATGA | 1 cut(s) | 1993 |
| PctI | GAATGC | 1 cut(s) | 1978 |
| PdmI | GAANNNNTTC | 3 cut(s) | 544, 1215, 1941 |
| PfeI | GAWTC | 4 cut(s) | 140, 338, 540, 740 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2197 |
| PkrI | GCNGC | 6 cut(s) | 94, 97, 241, 244, 676, 1596 |
| PleI | GAGTC | 5 cut(s) | 278, 284, 485, 509, 911 |
| PpsI | GAGTC | 5 cut(s) | 278, 284, 485, 509, 911 |
| PsiI | TTATAA | 2 cut(s) | 177, 1529 |
| Psp6I | CCWGG | 4 cut(s) | 501, 534, 1249, 1632 |
| PspEI | GGTNACC | 1 cut(s) | 1253 |
| PspFI | CCCAGC | 1 cut(s) | 56 |
| PspGI | CCWGG | 4 cut(s) | 501, 534, 1249, 1632 |
| PspN4I | GGNNCC | 2 cut(s) | 1631, 2188 |
| PspPI | GGNCC | 2 cut(s) | 1174, 1183 |
| PsuI | RGATCY | 4 cut(s) | 418, 976, 2103, 2186 |
| RsaI | GTAC | 7 cut(s) | 594, 1245, 1314, 1385, 1631, 1785, 1794 |
| RsaNI | GTAC | 7 cut(s) | 593, 1244, 1313, 1384, 1630, 1784, 1793 |
| RseI | CAYNNNNRTG | 3 cut(s) | 571, 1521, 1998 |
| SacII | CCGCGG | 1 cut(s) | 2110 |
| SalI | GTCGAC | 1 cut(s) | 1478 |
| SaqAI | TTAA | 8 cut(s) | 611, 732, 1128, 1167, 1574, 1710, 2123, 2172 |
| SatI | GCNGC | 6 cut(s) | 93, 96, 240, 243, 675, 1595 |
| Sau96I | GGNCC | 2 cut(s) | 1174, 1183 |
| ScaI | AGTACT | 1 cut(s) | 1314 |
| SchI | GAGTC | 5 cut(s) | 278, 284, 485, 509, 911 |
| ScrFI | CCNGG | 4 cut(s) | 503, 536, 1251, 1634 |
| SduI | GDGCHC | 4 cut(s) | 606, 2029, 2083, 2214 |
| SexAI | ACCWGGT | 1 cut(s) | 1249 |
| SfcI | CTRYAG | 1 cut(s) | 1494 |
| Sfr303I | CCGCGG | 1 cut(s) | 2110 |
| SgrBI | CCGCGG | 1 cut(s) | 2110 |
| SinI | GGWCC | 2 cut(s) | 1174, 1183 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 571, 1521, 1998 |
| SmlI | CTYRAG | 3 cut(s) | 577, 919, 2240 |
| SmoI | CTYRAG | 3 cut(s) | 577, 919, 2240 |
| SphI | GCATGC | 1 cut(s) | 2205 |
| SsiI | CCGC | 9 cut(s) | 92, 239, 478, 1810, 1905, 2003, 2053, 2107, 2109 |
| SspI | AATATT | 1 cut(s) | 1837 |
| SspMI | CTAG | 7 cut(s) | 99, 215, 225, 345, 744, 972, 1299 |
| StyD4I | CCNGG | 4 cut(s) | 501, 534, 1249, 1632 |
| StyI | CCWWGG | 1 cut(s) | 1625 |
| TaaI | ACNGT | 4 cut(s) | 597, 1388, 1733, 2209 |
| TaqI | TCGA | 4 cut(s) | 1292, 1479, 1945, 2285 |
| TaqII | GACCGA | 1 cut(s) | 1200 |
| TatI | WGTACW | 3 cut(s) | 592, 1312, 1383 |
| TauI | GCSGC | 2 cut(s) | 95, 242 |
| TfiI | GAWTC | 4 cut(s) | 140, 338, 540, 740 |
| Tru1I | TTAA | 8 cut(s) | 611, 732, 1128, 1167, 1574, 1710, 2123, 2172 |
| Tru9I | TTAA | 8 cut(s) | 611, 732, 1128, 1167, 1574, 1710, 2123, 2172 |
| TscAI | CASTG | 3 cut(s) | 782, 1393, 1724 |
| TseFI | GTSAC | 6 cut(s) | 281, 347, 383, 1253, 1301, 1965 |
| TseI | GCWGC | 4 cut(s) | 95, 242, 674, 1594 |
| Tsp45I | GTSAC | 6 cut(s) | 281, 347, 383, 1253, 1301, 1965 |
| TspGWI | ACGGA | 2 cut(s) | 345, 1046 |
| TspRI | CASTG | 3 cut(s) | 782, 1393, 1724 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2197 |
| VneI | GTGCAC | 1 cut(s) | 2025 |
| VpaK11BI | GGWCC | 2 cut(s) | 1174, 1183 |
| XapI | RAATTY | 5 cut(s) | 392, 2112, 2119, 2153, 2293 |
| XceI | RCATGY | 2 cut(s) | 1646, 2205 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1316 |
| XmiI | GTMKAC | 1 cut(s) | 1479 |
| XmnI | GAANNNNTTC | 3 cut(s) | 544, 1215, 1941 |
| XspI | CTAG | 7 cut(s) | 99, 215, 225, 345, 744, 972, 1299 |
| ZrmI | AGTACT | 1 cut(s) | 1314 |
| Zsp2I | ATGCAT | 5 cut(s) | 568, 937, 948, 1648, 1978 |