FvH4_5g15943

F-Box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000068
Physical Location & Seq
Forward (+)
9037419 .. 9038800
1382 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g15943.t1

Sequence Viewer

Length: 1251 bp
ATGTCAGATTTAAGCTTCCTGCTTCCCTTAGAAATCACTACCGATATCATGTTAAGGTTGCCTATCAAGTCCATAGTCACATGTGCATCAGTCTGCAAATCATGGAATTCTCTTATCAAAAGCTCCGCCTTCACTGAGAACCATCTCCACTGCACCATCCAATCCTACCGCCGAAAAGATGTTCACATCCTTTTGTTAAGGGAGCGAAAGGAGATTTACTCGTTGTATCGGAATAACCCTTCTGCACTTGGTTCTGATCAGTATGTCGAGCTTCCATATCCATCAAAATTTGTTTTCCCAGAGTTACATTATCTCAGCGAGTATCATATCGTAAGCGGAACTTGTAACTGGCTCGTATGTCTTGCTTTTGGATATGATATTTCTATGCAAGAGTACCCCATAATAATTTGGAACCCTACGGTTAGGAAGTTTGTACTCTTGCCAAGGCCTAGTTTTATTTGGGATTCGTATTTTGATCAATCTGGTGGATACCATTGTCGTGTTAAATGGCCTCGACAAACTCATGCATTTGGCCATGATTCGAGAAGCAACGACTATAAGGTTTTGAGAATAGTAAGTGGTCTTGAAGAAGAACCAGCAGTTAGGGTTGAAGTTTACTCGTTAGCTAGAGGATCGTGGAGGCCTCTTGATGTTGCTGTACCTGCTTGTTTCAAGCCTCAATGTATATCTAGTTTCATCAATGGTGCTTCGCATTGGATTCAAACCCTTGACAAAGTAGGAAAGCGAAGAGATCAGGATGATGATGAGTATGTGATTGTGTTGTTCAATATGGAAACTGAGTTATTTGGTGAGATGCAGATGCCTGAAGCTTTAAGAAAATACAAACCACGTACGTCTTACATCATTTCAAAATACGAGGAGTGCCTAGCCTTGATTGAAACCGGAAGACAAAGGGAGCTCAATGTCCTTCAAGTTTGGGTTATGAAAGAGTATGGAGTGGTGGAATCGTGGACTAGATTATACAAGATTTCTGGCCTTGTAAGTATTCCATTAGACCCTTTTGGTTTCAAAAGCAGTTGTGAATTAGTACTGAGCATGCAGTTAGGCCGTCTAAACCCTCTGCAAACTGTGAATTTTGAGAACGGAGAAGTGAAAGATTTTGTCATCGACGAACATCACACATCAACACGTCTACCTCAACCCTTGAGACCAGGGTACGATTCGGTGAAGTCTTATTTTGTAGAAAGCCTTGTCTTGTTTGACCATCCAAGCGCTACTTCTTACTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

417

Amino Acids

48.27

Weight (kDa)

6.47

Isoelectric Point (pI)

46.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 8 - 45 1.4e-09 F-box domain
F-box-like PF12937 8 - 41 1.5e-07 F-box-like
FBA_3 PF08268 128 - 325 1e-16 F-box associated beta propeller domain
FBA_1 PF07734 131 - 337 4e-17 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 670
AccI GTMKAC 1 cut(s) 1153
AciI CCGC 3 cut(s) 126, 169, 336
AclWI GGATC 1 cut(s) 640
AcoI YGGCCR 1 cut(s) 532
AcsI RAATTY 3 cut(s) 106, 287, 1093
AcuI CTGAAG 1 cut(s) 846
AfaI GTAC 6 cut(s) 395, 435, 660, 853, 1050, 1178
AfeI AGCGCT 1 cut(s) 1234
AflIII ACRYGT 2 cut(s) 80, 1148
AgsI TTSAA 9 cut(s) 587, 611, 673, 722, 787, 870, 899, 932, 1030
AjiI CACGTC 1 cut(s) 1151
AjnI CCWGG 1 cut(s) 1171
AjuI GAANNNNNNNTTGG 1 cut(s) 1222
AluBI AGCT 6 cut(s) 15, 123, 271, 626, 830, 919
AluI AGCT 6 cut(s) 15, 123, 271, 626, 830, 919
Alw21I GWGCWC 1 cut(s) 921
Alw26I GTCTC 1 cut(s) 1162
AlwI GGATC 1 cut(s) 640
Aor51HI AGCGCT 1 cut(s) 1234
AoxI GGCC 6 cut(s) 446, 509, 532, 641, 994, 1066
ApoI RAATTY 3 cut(s) 106, 287, 1093
AspLEI GCGC 1 cut(s) 1235
AsuHPI GGTGA 2 cut(s) 821, 1198
BaeI ACNNNNGTAYC 2 cut(s) 481, 514
BalI TGGCCA 1 cut(s) 534
BanII GRGCYC 1 cut(s) 921
BbsI GAAGAC 1 cut(s) 913
Bbv12I GWGCWC 1 cut(s) 921
BccI CCATC 4 cut(s) 150, 164, 289, 1233
BceAI ACGGC 1 cut(s) 1053
BciT130I CCWGG 1 cut(s) 1173
BciVI GTATCC 1 cut(s) 482
BclI TGATCA 2 cut(s) 256, 475
BcoDI GTCTC 1 cut(s) 1162
BfaI CTAG 6 cut(s) 450, 627, 690, 887, 975, 1249
BfoI RGCGCY 1 cut(s) 1236
BfuAI ACCTGC 1 cut(s) 670
BfuI GTATCC 1 cut(s) 482
BmcAI AGTACT 1 cut(s) 1050
Bme1390I CCNGG 1 cut(s) 1173
BmgBI CACGTC 1 cut(s) 1151
BmiI GGNNCC 1 cut(s) 413
BmrFI CCNGG 1 cut(s) 1173
BmsI GCATC 3 cut(s) 95, 804, 810
BpiI GAAGAC 1 cut(s) 913
BplI GAGNNNNNCTC 2 cut(s) 203, 235
BpuEI CTTGAG 1 cut(s) 1186
BsaAI YACGTR 1 cut(s) 851
BsaI GGTCTC 1 cut(s) 1162
BsaJI CCNNGG 2 cut(s) 443, 1172
BsaWI WCCGGW 1 cut(s) 902
Bse1I ACTGG 1 cut(s) 353
BseBI CCWGG 1 cut(s) 1173
BseDI CCNNGG 2 cut(s) 443, 1172
BseGI GGATG 4 cut(s) 156, 186, 763, 1225
BseMII CTCAG 4 cut(s) 126, 328, 789, 1043
BseNI ACTGG 1 cut(s) 353
BseRI GAGGAG 1 cut(s) 893
BsgI GTGCAG 2 cut(s) 136, 228
BshFI GGCC 6 cut(s) 448, 511, 534, 643, 996, 1068
BsiHKAI GWGCWC 1 cut(s) 921
BsiSI CCGG 1 cut(s) 903
BsiWI CGTACG 1 cut(s) 851
BsmAI GTCTC 1 cut(s) 1162
BsnI GGCC 6 cut(s) 448, 511, 534, 643, 996, 1068
Bso31I GGTCTC 1 cut(s) 1162
Bsp1286I GDGCHC 1 cut(s) 921
Bsp143I GATC 4 cut(s) 256, 475, 632, 751
BspACI CCGC 3 cut(s) 126, 169, 336
BspANI GGCC 6 cut(s) 448, 511, 534, 643, 996, 1068
BspCNI CTCAG 4 cut(s) 127, 327, 790, 1044
BspLI GGNNCC 1 cut(s) 413
BspMI ACCTGC 1 cut(s) 670
BspPI GGATC 1 cut(s) 640
BspTNI GGTCTC 1 cut(s) 1162
BsrI ACTGG 1 cut(s) 353
BssECI CCNNGG 2 cut(s) 443, 1172
BssMI GATC 4 cut(s) 256, 475, 632, 751
BssT1I CCWWGG 1 cut(s) 443
Bst2UI CCWGG 1 cut(s) 1173
Bst4CI ACNGT 2 cut(s) 421, 1090
Bst6I CTCTTC 1 cut(s) 742
BstBAI YACGTR 1 cut(s) 851
BstC8I GCNNGC 1 cut(s) 1058
BstDEI CTNAG 5 cut(s) 28, 135, 314, 798, 1052
BstF5I GGATG 4 cut(s) 156, 186, 763, 1225
BstH2I RGCGCY 1 cut(s) 1236
BstHHI GCGC 1 cut(s) 1235
BstKTI GATC 4 cut(s) 259, 478, 635, 754
BstMAI GTCTC 1 cut(s) 1162
BstMBI GATC 4 cut(s) 256, 475, 632, 751
BstMWI GCNNNNNNNGC 1 cut(s) 662
BstNI CCWGG 1 cut(s) 1173
BstNSI RCATGY 2 cut(s) 84, 1060
BstSCI CCNGG 1 cut(s) 1171
BstV2I GAAGAC 1 cut(s) 913
BsuI GTATCC 1 cut(s) 482
BsuRI GGCC 6 cut(s) 448, 511, 534, 643, 996, 1068
BtrI CACGTC 1 cut(s) 1151
BtsCI GGATG 4 cut(s) 156, 186, 763, 1225
BtsI GCAGTG 1 cut(s) 148
BtsIMutI CAGTG 2 cut(s) 132, 148
BveI ACCTGC 1 cut(s) 670
Cac8I GCNNGC 1 cut(s) 1058
CfoI GCGC 1 cut(s) 1235
Csp6I GTAC 6 cut(s) 394, 434, 659, 852, 1049, 1177
CviAII CATG 6 cut(s) 49, 81, 102, 524, 536, 1057
CviQI GTAC 6 cut(s) 394, 434, 659, 852, 1049, 1177
DdeI CTNAG 5 cut(s) 28, 135, 314, 798, 1052
DpnI GATC 4 cut(s) 258, 477, 634, 753
DpnII GATC 4 cut(s) 256, 475, 632, 751
EaeI YGGCCR 1 cut(s) 532
Eam1104I CTCTTC 1 cut(s) 742
EarI CTCTTC 1 cut(s) 742
EciI GGCGGA 1 cut(s) 115
Ecl136II GAGCTC 1 cut(s) 919
Eco130I CCWWGG 1 cut(s) 443
Eco147I AGGCCT 2 cut(s) 448, 643
Eco24I GRGCYC 1 cut(s) 921
Eco31I GGTCTC 1 cut(s) 1162
Eco32I GATATC 1 cut(s) 46
Eco47III AGCGCT 1 cut(s) 1234
Eco53kI GAGCTC 1 cut(s) 919
Eco57I CTGAAG 1 cut(s) 846
EcoICRI GAGCTC 1 cut(s) 919
EcoRI GAATTC 1 cut(s) 106
EcoRII CCWGG 1 cut(s) 1171
EcoRV GATATC 1 cut(s) 46
EcoT14I CCWWGG 1 cut(s) 443
EcoT22I ATGCAT 1 cut(s) 529
EcoT38I GRGCYC 1 cut(s) 921
ErhI CCWWGG 1 cut(s) 443
FaeI CATG 6 cut(s) 52, 84, 105, 527, 539, 1060
FalI AAGNNNNNCTT 3 cut(s) 325, 357, 1222
FatI CATG 6 cut(s) 48, 80, 101, 523, 535, 1056
FbaI TGATCA 2 cut(s) 256, 475
FblI GTMKAC 1 cut(s) 1153
FokI GGATG 4 cut(s) 143, 173, 770, 1212
FriOI GRGCYC 1 cut(s) 921
FspBI CTAG 6 cut(s) 450, 627, 690, 887, 975, 1249
GlaI GCGC 1 cut(s) 1234
HaeII RGCGCY 1 cut(s) 1236
HaeIII GGCC 6 cut(s) 448, 511, 534, 643, 996, 1068
HapII CCGG 1 cut(s) 903
HhaI GCGC 1 cut(s) 1235
Hin1II CATG 6 cut(s) 52, 84, 105, 527, 539, 1060
Hin6I GCGC 1 cut(s) 1233
HinP1I GCGC 1 cut(s) 1233
HindIII AAGCTT 2 cut(s) 13, 828
HinfI GANTC 5 cut(s) 464, 539, 718, 965, 1181
HpaII CCGG 1 cut(s) 903
HphI GGTGA 2 cut(s) 821, 1198
Hpy166II GTNNAC 4 cut(s) 184, 616, 972, 1154
Hpy188I TCNGA 3 cut(s) 7, 231, 256
Hpy188III TCNNGA 4 cut(s) 543, 584, 647, 755
Hpy8I GTNNAC 4 cut(s) 184, 616, 972, 1154
Hpy99I CGWCG 1 cut(s) 1133
HpyAV CCTTC 3 cut(s) 139, 249, 938
HpyCH4III ACNGT 2 cut(s) 421, 1090
HpyCH4IV ACGT 3 cut(s) 850, 854, 1150
HpyCH4V TGCA 9 cut(s) 86, 96, 153, 245, 388, 527, 817, 1060, 1084
HpyF10VI GCNNNNNNNGC 1 cut(s) 662
HpyF3I CTNAG 5 cut(s) 28, 135, 314, 798, 1052
HpySE526I ACGT 3 cut(s) 850, 854, 1150
Hsp92II CATG 6 cut(s) 52, 84, 105, 527, 539, 1060
HspAI GCGC 1 cut(s) 1233
Ksp22I TGATCA 2 cut(s) 256, 475
Kzo9I GATC 4 cut(s) 256, 475, 632, 751
LmnI GCTCC 3 cut(s) 128, 202, 916
LweI GCATC 3 cut(s) 95, 804, 810
MaeI CTAG 6 cut(s) 450, 627, 690, 887, 975, 1249
MaeII ACGT 3 cut(s) 850, 854, 1150
MaeIII GTNAC 3 cut(s) 76, 303, 344
MalI GATC 4 cut(s) 258, 477, 634, 753
MboI GATC 4 cut(s) 256, 475, 632, 751
MboII GAAGA 4 cut(s) 599, 602, 759, 918
MhlI GDGCHC 1 cut(s) 921
MlsI TGGCCA 1 cut(s) 534
MluCI AATT 5 cut(s) 106, 287, 405, 1043, 1093
MluNI TGGCCA 1 cut(s) 534
MnlI CCTC 8 cut(s) 522, 623, 633, 654, 687, 871, 1089, 1167
Mox20I TGGCCA 1 cut(s) 534
Mph1103I ATGCAT 1 cut(s) 529
MscI TGGCCA 1 cut(s) 534
MseI TTAA 5 cut(s) 11, 53, 197, 504, 833
MslI CAYNNNNRTG 1 cut(s) 498
Msp20I TGGCCA 1 cut(s) 534
MspI CCGG 1 cut(s) 903
MspR9I CCNGG 1 cut(s) 1173
MvaI CCWGG 1 cut(s) 1173
MwoI GCNNNNNNNGC 1 cut(s) 662
NdeII GATC 4 cut(s) 256, 475, 632, 751
NlaIII CATG 6 cut(s) 52, 84, 105, 527, 539, 1060
NlaIV GGNNCC 1 cut(s) 413
NmuCI GTSAC 1 cut(s) 76
NsiI ATGCAT 1 cut(s) 529
NspI RCATGY 2 cut(s) 84, 1060
PaeI GCATGC 1 cut(s) 1060
PceI AGGCCT 2 cut(s) 448, 643
PciI ACATGT 1 cut(s) 80
PfeI GAWTC 5 cut(s) 464, 539, 718, 965, 1181
Pfl23II CGTACG 1 cut(s) 851
Ppu21I YACGTR 1 cut(s) 851
PscI ACATGT 1 cut(s) 80
Psp124BI GAGCTC 1 cut(s) 921
Psp6I CCWGG 1 cut(s) 1171
PspGI CCWGG 1 cut(s) 1171
PspLI CGTACG 1 cut(s) 851
PspN4I GGNNCC 1 cut(s) 413
RsaI GTAC 6 cut(s) 395, 435, 660, 853, 1050, 1178
RsaNI GTAC 6 cut(s) 394, 434, 659, 852, 1049, 1177
RseI CAYNNNNRTG 1 cut(s) 498
SacI GAGCTC 1 cut(s) 921
SaqAI TTAA 5 cut(s) 11, 53, 197, 504, 833
Sau3AI GATC 4 cut(s) 256, 475, 632, 751
ScaI AGTACT 1 cut(s) 1050
ScrFI CCNGG 1 cut(s) 1173
SduI GDGCHC 1 cut(s) 921
SfaNI GCATC 3 cut(s) 95, 804, 810
SmiMI CAYNNNNRTG 1 cut(s) 498
SmlI CTYRAG 1 cut(s) 1165
SmoI CTYRAG 1 cut(s) 1165
SphI GCATGC 1 cut(s) 1060
Sse9I AATT 5 cut(s) 106, 287, 405, 1043, 1093
SseBI AGGCCT 2 cut(s) 448, 643
SsiI CCGC 3 cut(s) 126, 169, 336
SspMI CTAG 6 cut(s) 450, 627, 690, 887, 975, 1249
SstI GAGCTC 1 cut(s) 921
StuI AGGCCT 2 cut(s) 448, 643
StyD4I CCNGG 1 cut(s) 1171
StyI CCWWGG 1 cut(s) 443
TaaI ACNGT 2 cut(s) 421, 1090
TaiI ACGT 3 cut(s) 853, 857, 1153
TaqI TCGA 4 cut(s) 267, 514, 542, 1128
TasI AATT 5 cut(s) 106, 287, 405, 1043, 1093
TatI WGTACW 2 cut(s) 433, 1048
TfiI GAWTC 5 cut(s) 464, 539, 718, 965, 1181
Tru1I TTAA 5 cut(s) 11, 53, 197, 504, 833
Tru9I TTAA 5 cut(s) 11, 53, 197, 504, 833
TscAI CASTG 2 cut(s) 139, 155
TseFI GTSAC 1 cut(s) 76
Tsp45I GTSAC 1 cut(s) 76
TspDTI ATGAA 2 cut(s) 685, 959
TspGWI ACGGA 1 cut(s) 1119
TspRI CASTG 2 cut(s) 139, 155
XapI RAATTY 3 cut(s) 106, 287, 1093
XceI RCATGY 2 cut(s) 84, 1060
XmiI GTMKAC 1 cut(s) 1153
XspI CTAG 6 cut(s) 450, 627, 690, 887, 975, 1249
ZrmI AGTACT 1 cut(s) 1050
Zsp2I ATGCAT 1 cut(s) 529
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.