RchiOBHm_Chr2g0116451

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000068
Physical Location & Seq
Reverse (-)
28766568 .. 28773259
6692 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48949

Sequence Viewer

Length: 1167 bp
ATGAAGACCCAAAAACAACAATGGGGAGTCGAAGACTACTTTCCTGAAGAAATCGTGGACAAAATCCTGTTGAAGTTGCCCGTCAAAGAGGTTATTAGATGCAGCGCCGTGTGCAAGTTATGGAACTCTCTCATCAAAAACCCTACCTTCATTCAAACCCACCTCAAGAATCAAACCCACGACGGCGTTTCGGAGCTCCTCCTACTCAGCTCCGACCAATCAGACGATCTGCATTGGGATAACCCTGCAGCTTTATTCGGTCAGTATTCCAACCTCCGAAATCCAATTCACAACGACGACGACAGTAGCAATTGGACCAAAGGTATCAGTTACCAAGTGGTCGGAACTTGTAACGGACTCGTTTGCCTTTCTCTTTACTCATTTGACCGTGACCCATGCCCTCCTGTAATTCTCTGGAATCCATCCATTAGAAAGTTCGGGTTTTTGCCTAGTCCAAGTCTTGCCACTGATTGCTGCCGGAATGAAAGTTATTATTTCTGCTATGATTCTCGTATTGATGATTATAAGGTTGTGAGAATTGTCGAGAGAATCCATCGCGAGGTTGAGGTCTGGTCCTTAGCCTCAGGAGGTGCTTGGAAGAGTCTTAATAATGTTCCTGCCGATTTTTCCCCTTATAGACACTGTCATGCTTTTGTCAACGGTGCTTTTCACTGGGTTCAAAGCCGCCCGACGAAGGAGGAGGAGGAGGAGGAGTTTGCTGTTTCCGTTGTGGCATTGGATATGGTTGATGAATCATTTCGCAATGTTGAGATTCGCCAAGGTTGGAGTGGTCCACCAATGATTTCAAGGTACCATGGTGATGGGGATCAGTGCTGGCTTGCGTTATTTGAGTTGCAGGGAGACTCTTGTTTTGACTTGTGGGTCATGAAAGAGTACGGTGTGGCCGAATCATGGACTAAATTATTCAATGTGCGTCTGCTAGGATCTCCGGAAGAAGAACTTCGGATCGAGCCATTTGGTTTTACAAAGAGTGGTCAGGTGGTGGTCAGAATGGGTCGAGACGAAGAGTTCAATTCGTTCAAGTCTTATGACCCCGAGGACAAACAGTTTAGAGATTTTGGAAATCAGGCATATGACTACTACTTCATGGATTCTTTCGTGGAGAGCCTTGTCTTACTTGGCCAAACCAATGTTTTTTCTTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

388

Amino Acids

44.86

Weight (kDa)

4.87

Isoelectric Point (pI)

48.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 14 - 50 9.3e-10 F-box domain
F-box-like PF12937 15 - 49 1.6e-07 F-box-like
FBA_3 PF08268 102 - 363 2.9e-18 F-box associated beta propeller domain
FBA_1 PF07734 103 - 378 1.4e-14 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 525
AasI GACNNNNNNGTC 1 cut(s) 881
Acc65I GGTACC 1 cut(s) 810
AccB1I GGYRCC 1 cut(s) 810
AccII CGCG 1 cut(s) 558
AccIII TCCGGA 1 cut(s) 949
AciI CCGC 1 cut(s) 685
AclWI GGATC 3 cut(s) 834, 952, 974
AcoI YGGCCR 2 cut(s) 903, 1141
AcuI CTGAAG 1 cut(s) 66
AfaI GTAC 2 cut(s) 812, 896
AfiI CCNNNNNNNGG 3 cut(s) 559, 694, 912
AgsI TTSAA 7 cut(s) 73, 155, 680, 807, 928, 1033, 1042
AluBI AGCT 3 cut(s) 196, 210, 251
AluI AGCT 3 cut(s) 196, 210, 251
Alw21I GWGCWC 1 cut(s) 198
Alw26I GTCTC 2 cut(s) 855, 1014
AlwI GGATC 3 cut(s) 834, 952, 974
Ama87I CYCGRG 1 cut(s) 1055
Aor13HI TCCGGA 1 cut(s) 949
AoxI GGCC 2 cut(s) 903, 1141
ApeKI GCWGC 3 cut(s) 102, 248, 474
ArsI GACNNNNNNTTYG 2 cut(s) 854, 886
Asp700I GAANNNNTTC 2 cut(s) 756, 960
Asp718I GGTACC 1 cut(s) 810
AspLEI GCGC 1 cut(s) 107
AspS9I GGNCC 3 cut(s) 315, 573, 791
AsuHPI GGTGA 1 cut(s) 830
AvaI CYCGRG 1 cut(s) 1055
AvaII GGWCC 3 cut(s) 315, 573, 791
AxyI CCTNAGG 1 cut(s) 583
BaeI ACNNNNGTAYC 2 cut(s) 802, 835
BalI TGGCCA 1 cut(s) 1143
BanI GGYRCC 1 cut(s) 810
BanII GRGCYC 1 cut(s) 198
BbsI GAAGAC 2 cut(s) 11, 39
Bbv12I GWGCWC 1 cut(s) 198
BbvI GCAGC 3 cut(s) 114, 260, 461
BccI CCATC 3 cut(s) 430, 561, 815
BceAI ACGGC 2 cut(s) 92, 199
BcoDI GTCTC 2 cut(s) 855, 1014
BfaI CTAG 2 cut(s) 450, 941
BfmI CTRYAG 1 cut(s) 246
BfoI RGCGCY 1 cut(s) 108
BisI GCNGC 4 cut(s) 103, 249, 475, 685
BlsI GCNGC 4 cut(s) 104, 250, 476, 686
Bme18I GGWCC 3 cut(s) 315, 573, 791
BmeT110I CYCGRG 1 cut(s) 1055
BmgT120I GGNCC 3 cut(s) 315, 573, 791
BmiI GGNNCC 1 cut(s) 812
BmrI ACTGGG 1 cut(s) 682
BmsI GCATC 1 cut(s) 89
BmuI ACTGGG 1 cut(s) 682
BpiI GAAGAC 2 cut(s) 11, 39
Bpu10I CCTNAGC 1 cut(s) 577
BpuEI CTTGAG 1 cut(s) 149
BsaBI GATNNNNATC 1 cut(s) 825
BsaJI CCNNGG 3 cut(s) 778, 814, 1056
BsaWI WCCGGW 1 cut(s) 949
BsaXI ACNNNNNCTCC 2 cut(s) 698, 728
Bsc4I CCNNNNNNNGG 3 cut(s) 559, 694, 912
Bse1I ACTGG 1 cut(s) 677
Bse21I CCTNAGG 1 cut(s) 583
Bse3DI GCAATG 1 cut(s) 769
Bse8I GATNNNNATC 1 cut(s) 825
BseAI TCCGGA 1 cut(s) 949
BseDI CCNNGG 3 cut(s) 778, 814, 1056
BseGI GGATG 1 cut(s) 422
BseJI GATNNNNATC 1 cut(s) 825
BseLI CCNNNNNNNGG 3 cut(s) 559, 694, 912
BseMI GCAATG 1 cut(s) 769
BseMII CTCAG 2 cut(s) 220, 597
BseNI ACTGG 1 cut(s) 677
BseRI GAGGAG 6 cut(s) 188, 713, 716, 719, 722, 725
BseXI GCAGC 3 cut(s) 114, 260, 461
Bsh1236I CGCG 1 cut(s) 558
BshFI GGCC 2 cut(s) 905, 1143
BshNI GGYRCC 1 cut(s) 810
BsiHKAI GWGCWC 1 cut(s) 198
BsiHKCI CYCGRG 1 cut(s) 1055
BsiSI CCGG 2 cut(s) 478, 950
BslI CCNNNNNNNGG 3 cut(s) 559, 694, 912
BsmAI GTCTC 2 cut(s) 855, 1014
BsmBI CGTCTC 1 cut(s) 1014
BsnI GGCC 2 cut(s) 905, 1143
BsoBI CYCGRG 1 cut(s) 1055
Bsp1286I GDGCHC 1 cut(s) 198
Bsp13I TCCGGA 1 cut(s) 949
Bsp143I GATC 4 cut(s) 226, 826, 944, 966
Bsp19I CCATGG 1 cut(s) 814
Bsp68I TCGCGA 1 cut(s) 558
BspACI CCGC 1 cut(s) 685
BspANI GGCC 2 cut(s) 905, 1143
BspCNI CTCAG 2 cut(s) 219, 596
BspEI TCCGGA 1 cut(s) 949
BspFNI CGCG 1 cut(s) 558
BspHI TCATGA 1 cut(s) 885
BspLI GGNNCC 1 cut(s) 812
BspMAI CTGCAG 1 cut(s) 250
BspPI GGATC 3 cut(s) 834, 952, 974
BspT107I GGYRCC 1 cut(s) 810
BsrDI GCAATG 1 cut(s) 769
BsrI ACTGG 1 cut(s) 677
BssECI CCNNGG 3 cut(s) 778, 814, 1056
BssMI GATC 4 cut(s) 226, 826, 944, 966
BssT1I CCWWGG 2 cut(s) 778, 814
Bst4CI ACNGT 6 cut(s) 305, 389, 644, 662, 899, 1068
Bst6I CTCTTC 2 cut(s) 593, 1020
BstC8I GCNNGC 2 cut(s) 836, 840
BstDEI CTNAG 3 cut(s) 206, 577, 583
BstDSI CCRYGG 1 cut(s) 814
BstF5I GGATG 1 cut(s) 422
BstFNI CGCG 1 cut(s) 558
BstH2I RGCGCY 1 cut(s) 108
BstHHI GCGC 1 cut(s) 107
BstKTI GATC 4 cut(s) 229, 829, 947, 969
BstMAI GTCTC 2 cut(s) 855, 1014
BstMBI GATC 4 cut(s) 226, 826, 944, 966
BstMWI GCNNNNNNNGC 1 cut(s) 111
BstSFI CTRYAG 1 cut(s) 246
BstUI CGCG 1 cut(s) 558
BstV1I GCAGC 3 cut(s) 114, 260, 461
BstV2I GAAGAC 2 cut(s) 11, 39
BstX2I RGATCY 1 cut(s) 944
BstXI CCANNNNNNTGG 1 cut(s) 821
BstYI RGATCY 1 cut(s) 944
Bsu36I CCTNAGG 1 cut(s) 583
BsuRI GGCC 2 cut(s) 905, 1143
BtgI CCRYGG 1 cut(s) 814
BtgZI GCGATG 1 cut(s) 539
BtsCI GGATG 1 cut(s) 422
BtsIMutI CAGTG 4 cut(s) 465, 640, 670, 836
BtuMI TCGCGA 1 cut(s) 558
Cac8I GCNNGC 2 cut(s) 836, 840
CciI TCATGA 1 cut(s) 885
CfoI GCGC 1 cut(s) 107
Cfr13I GGNCC 3 cut(s) 315, 573, 791
CseI GACGC 1 cut(s) 923
Csp6I GTAC 2 cut(s) 811, 895
CviAII CATG 6 cut(s) 396, 647, 815, 886, 912, 1108
CviQI GTAC 2 cut(s) 811, 895
DdeI CTNAG 3 cut(s) 206, 577, 583
DpnI GATC 4 cut(s) 228, 828, 946, 968
DpnII GATC 4 cut(s) 226, 826, 944, 966
DrdI GACNNNNNNGTC 1 cut(s) 881
DseDI GACNNNNNNGTC 1 cut(s) 881
EaeI YGGCCR 2 cut(s) 903, 1141
Eam1104I CTCTTC 2 cut(s) 593, 1020
EarI CTCTTC 2 cut(s) 593, 1020
Ecl136II GAGCTC 1 cut(s) 196
Eco130I CCWWGG 2 cut(s) 778, 814
Eco24I GRGCYC 1 cut(s) 198
Eco47I GGWCC 3 cut(s) 315, 573, 791
Eco53kI GAGCTC 1 cut(s) 196
Eco57I CTGAAG 1 cut(s) 66
Eco81I CCTNAGG 1 cut(s) 583
Eco88I CYCGRG 1 cut(s) 1055
EcoICRI GAGCTC 1 cut(s) 196
EcoT14I CCWWGG 2 cut(s) 778, 814
EcoT38I GRGCYC 1 cut(s) 198
ErhI CCWWGG 2 cut(s) 778, 814
Esp3I CGTCTC 1 cut(s) 1014
FaeI CATG 6 cut(s) 399, 650, 818, 889, 915, 1111
FalI AAGNNNNNCTT 2 cut(s) 945, 977
FatI CATG 6 cut(s) 395, 646, 814, 885, 911, 1107
FauNDI CATATG 1 cut(s) 1093
Fnu4HI GCNGC 4 cut(s) 103, 249, 475, 685
FokI GGATG 1 cut(s) 409
FriOI GRGCYC 1 cut(s) 198
Fsp4HI GCNGC 4 cut(s) 103, 249, 475, 685
FspBI CTAG 2 cut(s) 450, 941
GlaI GCGC 1 cut(s) 106
GluI GCNGC 4 cut(s) 103, 249, 475, 685
HaeII RGCGCY 1 cut(s) 108
HaeIII GGCC 2 cut(s) 905, 1143
HapII CCGG 2 cut(s) 478, 950
HgaI GACGC 1 cut(s) 923
HhaI GCGC 1 cut(s) 107
Hin1II CATG 6 cut(s) 399, 650, 818, 889, 915, 1111
Hin6I GCGC 1 cut(s) 105
HinP1I GCGC 1 cut(s) 105
HincII GTYRAC 1 cut(s) 658
HindII GTYRAC 1 cut(s) 658
HpaII CCGG 2 cut(s) 478, 950
HphI GGTGA 1 cut(s) 830
Hpy166II GTNNAC 3 cut(s) 58, 658, 794
Hpy188I TCNGA 7 cut(s) 193, 214, 223, 278, 344, 966, 1010
Hpy188III TCNNGA 9 cut(s) 44, 166, 415, 544, 557, 585, 886, 950, 1019
Hpy8I GTNNAC 3 cut(s) 58, 658, 794
Hpy99I CGWCG 4 cut(s) 185, 299, 302, 694
HpyAV CCTTC 2 cut(s) 157, 688
HpyCH4III ACNGT 6 cut(s) 305, 389, 644, 662, 899, 1068
HpyCH4V TGCA 5 cut(s) 102, 114, 232, 248, 856
HpyF10VI GCNNNNNNNGC 1 cut(s) 111
HpyF3I CTNAG 3 cut(s) 206, 577, 583
Hsp92II CATG 6 cut(s) 399, 650, 818, 889, 915, 1111
HspAI GCGC 1 cut(s) 105
Kpn2I TCCGGA 1 cut(s) 949
KpnI GGTACC 1 cut(s) 814
Kzo9I GATC 4 cut(s) 226, 826, 944, 966
LmnI GCTCC 3 cut(s) 193, 201, 215
Lsp1109I GCAGC 3 cut(s) 114, 260, 461
LweI GCATC 1 cut(s) 89
MaeI CTAG 2 cut(s) 450, 941
MaeIII GTNAC 3 cut(s) 329, 350, 389
MalI GATC 4 cut(s) 228, 828, 946, 968
MboI GATC 4 cut(s) 226, 826, 944, 966
MboII GAAGA 7 cut(s) 16, 44, 59, 610, 965, 968, 1037
MfeI CAATTG 1 cut(s) 310
MflI RGATCY 1 cut(s) 944
MhlI GDGCHC 1 cut(s) 198
MlsI TGGCCA 1 cut(s) 1143
MluCI AATT 6 cut(s) 285, 310, 408, 537, 920, 1033
MluNI TGGCCA 1 cut(s) 1143
MlyI GAGTC 4 cut(s) 36, 351, 610, 857
MmeI TCCRAC 4 cut(s) 237, 294, 322, 764
Mox20I TGGCCA 1 cut(s) 1143
MroI TCCGGA 1 cut(s) 949
MroXI GAANNNNTTC 2 cut(s) 756, 960
MscI TGGCCA 1 cut(s) 1143
MseI TTAA 1 cut(s) 606
MslI CAYNNNNRTG 2 cut(s) 645, 819
Msp20I TGGCCA 1 cut(s) 1143
MspI CCGG 2 cut(s) 478, 950
MunI CAATTG 1 cut(s) 310
MvnI CGCG 1 cut(s) 558
MwoI GCNNNNNNNGC 1 cut(s) 111
NcoI CCATGG 1 cut(s) 814
NdeI CATATG 1 cut(s) 1093
NdeII GATC 4 cut(s) 226, 826, 944, 966
NlaIII CATG 6 cut(s) 399, 650, 818, 889, 915, 1111
NlaIV GGNNCC 1 cut(s) 812
NmuCI GTSAC 1 cut(s) 389
NruI TCGCGA 1 cut(s) 558
PagI TCATGA 1 cut(s) 885
PcsI WCGNNNNNNNCGW 1 cut(s) 903
PdmI GAANNNNTTC 2 cut(s) 756, 960
PfeI GAWTC 8 cut(s) 169, 418, 506, 549, 752, 772, 908, 1112
PflFI GACNNNGTC 1 cut(s) 642
PkrI GCNGC 4 cut(s) 104, 250, 476, 686
PleI GAGTC 4 cut(s) 35, 351, 609, 857
PpsI GAGTC 4 cut(s) 35, 351, 609, 857
PsiI TTATAA 1 cut(s) 525
Psp124BI GAGCTC 1 cut(s) 198
PspN4I GGNNCC 1 cut(s) 812
PspPI GGNCC 3 cut(s) 315, 573, 791
PstI CTGCAG 1 cut(s) 250
PsuI RGATCY 1 cut(s) 944
PsyI GACNNNGTC 1 cut(s) 642
RruI TCGCGA 1 cut(s) 558
RsaI GTAC 2 cut(s) 812, 896
RsaNI GTAC 2 cut(s) 811, 895
RseI CAYNNNNRTG 2 cut(s) 645, 819
SacI GAGCTC 1 cut(s) 198
SaqAI TTAA 1 cut(s) 606
SatI GCNGC 4 cut(s) 103, 249, 475, 685
Sau3AI GATC 4 cut(s) 226, 826, 944, 966
Sau96I GGNCC 3 cut(s) 315, 573, 791
SchI GAGTC 4 cut(s) 36, 351, 610, 857
SduI GDGCHC 1 cut(s) 198
SfaNI GCATC 1 cut(s) 89
SfcI CTRYAG 1 cut(s) 246
SinI GGWCC 3 cut(s) 315, 573, 791
SmiMI CAYNNNNRTG 2 cut(s) 645, 819
SmlI CTYRAG 1 cut(s) 164
SmoI CTYRAG 1 cut(s) 164
Sse9I AATT 6 cut(s) 285, 310, 408, 537, 920, 1033
SsiI CCGC 1 cut(s) 685
SspMI CTAG 2 cut(s) 450, 941
SstI GAGCTC 1 cut(s) 198
StyI CCWWGG 2 cut(s) 778, 814
TaaI ACNGT 6 cut(s) 305, 389, 644, 662, 899, 1068
TaqI TCGA 4 cut(s) 30, 543, 969, 1018
TaqII GACCGA 1 cut(s) 248
TasI AATT 6 cut(s) 285, 310, 408, 537, 920, 1033
TauI GCSGC 1 cut(s) 687
TfiI GAWTC 8 cut(s) 169, 418, 506, 549, 752, 772, 908, 1112
Tru1I TTAA 1 cut(s) 606
Tru9I TTAA 1 cut(s) 606
TscAI CASTG 4 cut(s) 472, 647, 677, 836
TseFI GTSAC 1 cut(s) 389
TseI GCWGC 3 cut(s) 102, 248, 474
Tsp45I GTSAC 1 cut(s) 389
TspDTI ATGAA 6 cut(s) 17, 139, 498, 765, 902, 1096
TspGWI ACGGA 2 cut(s) 369, 715
TspRI CASTG 4 cut(s) 472, 647, 677, 836
Tth111I GACNNNGTC 1 cut(s) 642
VpaK11BI GGWCC 3 cut(s) 315, 573, 791
XcmI CCANNNNNNNNNTGG 1 cut(s) 785
XmnI GAANNNNTTC 2 cut(s) 756, 960
XspI CTAG 2 cut(s) 450, 941
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.