Rroxscaffold_6G00399460

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000068
Physical Location & Seq
Forward (+)
21373178 .. 21375553
2376 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00399460.1

Sequence Viewer

Length: 1158 bp
ATGTCAGACTACTTTCCTGAGGAAATCATACAAAGAATCCTGTTGAGGTTGCCTACGAAATCCCTAATCAAATCCACCCTAGTCTGCAAGTCATGGATGTCACTCATCAAATCCTCTACCTTCATTCAATCCCATCTCTCCACCACAATCGACACCAACAACCAAAACGATGCCCACCTCCTCCTCCTCAGCGCTTTCTCTTACGAAGTTTCTGATCGTCTGCACTGGTTGCATTGGGATACCCCTGAATTCGGTGAGTATTCCTTGCTTGCAGACCCAGTCACTTTCTTGGAAAACGAAACTATTTTCGATCTGGATGCAGTCGGAACTTGTAATGGGCTCATATGCCTTGCGCCTGACCTATCTGATAATCATTCCCCCACTTTAATTTGGAACCCATGTATTAGAAAGATTGTGATTTTGCCTAGCCCACCTGCTTGTTTTACCTCTACTCAGTATGATGAATGCATAGGCTTTGGCTATGATTCACATTCCAATGACTATAAGGTGTTGAGAATTGTGACTCTTCCTGATGATCATTCGGACTTGTCCCGATTCGCCACCGTGGTTCAGGTTTACTCATTAGCCAGGGGCTCCTGGAAGACTCTTGATGCCTCTGTTGTTCCTGTAGATTTGCAGGGTGGTCCTGCTATTGTACTATTTCTCAATGGTTCTCTGCATATGCTTGAAGTTCGTTTAAGTGTCGGATATGATGGAGATACTTTCATTGCTTCATTTGATATGGCCACCGAATTATTTGGCGAGGTGATTATTCCAGAAGCTTTGCAGAGCAACAGATGTACGATTTCAAAATATGGGGACTCCCTTGCCTTGATTAAGCATAATGATTATAGCTGTGGTTGTGACATATGGGTAATGAAAGAGTATGGTGTCACAGAGTCATGGACATATTTGTACAAGATAGCTGGGTTTCAAGATCGTATATATGGTTTCAAAAGGTGTGGGGAGGTTGTTCTGAGTGACGAAAATAGTCATGGTCGGTTAAGAATGATTTCGCTGGATCCTAAGAGCAAACAAGTTCAAGTTTTCGGAAATAAGGATTTTACTTACTACTTCATGGATTCTTTTGTAGAGAGTCTCATCTTGCTTGACCACGTCAATGCCATTTCGTACCAACGAGCAAGGAAGAACAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

385

Amino Acids

43.57

Weight (kDa)

5.05

Isoelectric Point (pI)

35.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 5 - 41 1.1e-08 F-box domain
F-box-like PF12937 6 - 39 2.2e-06 F-box-like
FBA_1 PF07734 102 - 348 5.6e-26 F-box associated beta propeller domain
FBA_3 PF08268 106 - 372 3.6e-22 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 442
Acc36I ACCTGC 1 cut(s) 442
AclWI GGATC 2 cut(s) 1016, 1029
AcoI YGGCCR 1 cut(s) 744
AcsI RAATTY 1 cut(s) 248
AfaI GTAC 4 cut(s) 657, 802, 917, 1133
AfeI AGCGCT 1 cut(s) 193
AfiI CCNNNNNNNGG 1 cut(s) 251
AgsI TTSAA 6 cut(s) 128, 689, 810, 935, 955, 1043
AjiI CACGTC 1 cut(s) 1117
AjnI CCWGG 2 cut(s) 587, 596
AluBI AGCT 3 cut(s) 782, 855, 926
AluI AGCT 3 cut(s) 782, 855, 926
Alw26I GTCTC 1 cut(s) 1103
AlwI GGATC 2 cut(s) 1016, 1029
Aor51HI AGCGCT 1 cut(s) 193
AoxI GGCC 1 cut(s) 744
ApoI RAATTY 1 cut(s) 248
Asp700I GAANNNNTTC 1 cut(s) 1012
AspLEI GCGC 2 cut(s) 194, 355
AspS9I GGNCC 1 cut(s) 644
AsuHPI GGTGA 2 cut(s) 266, 778
AvaII GGWCC 1 cut(s) 644
AxyI CCTNAGG 1 cut(s) 18
BalI TGGCCA 1 cut(s) 746
BamHI GGATCC 1 cut(s) 1021
BanII GRGCYC 2 cut(s) 342, 596
BbsI GAAGAC 1 cut(s) 608
BbvCI CCTCAGC 1 cut(s) 188
BccI CCATC 2 cut(s) 141, 707
BcgI CGANNNNNNTGC 2 cut(s) 299, 333
BciT130I CCWGG 2 cut(s) 589, 598
BciVI GTATCC 1 cut(s) 232
BclI TGATCA 1 cut(s) 535
BcoDI GTCTC 1 cut(s) 1103
BfaI CTAG 2 cut(s) 80, 426
BfmI CTRYAG 1 cut(s) 627
BfoI RGCGCY 1 cut(s) 195
BfuAI ACCTGC 1 cut(s) 442
BfuI GTATCC 1 cut(s) 232
Bme1390I CCNGG 2 cut(s) 589, 598
Bme18I GGWCC 1 cut(s) 644
BmgBI CACGTC 1 cut(s) 1117
BmgT120I GGNCC 1 cut(s) 644
BmiI GGNNCC 3 cut(s) 395, 595, 1023
BmrFI CCNGG 2 cut(s) 589, 598
BmrI ACTGGG 1 cut(s) 272
BmsI GCATC 3 cut(s) 160, 307, 601
BmuI ACTGGG 1 cut(s) 272
BpiI GAAGAC 1 cut(s) 608
Bpu10I CCTNAGC 1 cut(s) 188
BsaJI CCNNGG 2 cut(s) 564, 588
Bsc4I CCNNNNNNNGG 1 cut(s) 251
Bse1I ACTGG 2 cut(s) 230, 278
Bse21I CCTNAGG 1 cut(s) 18
Bse3DI GCAATG 1 cut(s) 726
BseBI CCWGG 2 cut(s) 589, 598
BseDI CCNNGG 2 cut(s) 564, 588
BseGI GGATG 2 cut(s) 102, 322
BseLI CCNNNNNNNGG 1 cut(s) 251
BseMI GCAATG 1 cut(s) 726
BseMII CTCAG 4 cut(s) 9, 202, 467, 968
BseNI ACTGG 2 cut(s) 230, 278
BseRI GAGGAG 3 cut(s) 170, 173, 176
BseYI CCCAGC 1 cut(s) 926
BsgI GTGCAG 1 cut(s) 206
BshFI GGCC 1 cut(s) 746
BslFI GGGAC 2 cut(s) 535, 833
BslI CCNNNNNNNGG 1 cut(s) 251
BsmAI GTCTC 1 cut(s) 1103
BsmFI GGGAC 2 cut(s) 535, 833
BsmI GAATGC 1 cut(s) 470
BsnI GGCC 1 cut(s) 746
Bsp1286I GDGCHC 2 cut(s) 342, 596
Bsp1407I TGTACA 1 cut(s) 915
Bsp143I GATC 5 cut(s) 214, 310, 535, 937, 1021
BspANI GGCC 1 cut(s) 746
BspCNI CTCAG 4 cut(s) 10, 201, 466, 969
BspLI GGNNCC 3 cut(s) 395, 595, 1023
BspMI ACCTGC 1 cut(s) 442
BspPI GGATC 2 cut(s) 1016, 1029
BsrDI GCAATG 1 cut(s) 726
BsrGI TGTACA 1 cut(s) 915
BsrI ACTGG 2 cut(s) 230, 278
BssECI CCNNGG 2 cut(s) 564, 588
BssMI GATC 5 cut(s) 214, 310, 535, 937, 1021
Bst2UI CCWGG 2 cut(s) 589, 598
Bst4CI ACNGT 1 cut(s) 565
Bst6I CTCTTC 1 cut(s) 531
BstAPI GCANNNNNTGC 1 cut(s) 229
BstAUI TGTACA 1 cut(s) 915
BstC8I GCNNGC 1 cut(s) 270
BstDEI CTNAG 5 cut(s) 18, 188, 453, 977, 1026
BstDSI CCRYGG 1 cut(s) 564
BstF5I GGATG 2 cut(s) 102, 322
BstH2I RGCGCY 1 cut(s) 195
BstHHI GCGC 2 cut(s) 194, 355
BstKTI GATC 5 cut(s) 217, 313, 538, 940, 1024
BstMAI GTCTC 1 cut(s) 1103
BstMBI GATC 5 cut(s) 214, 310, 535, 937, 1021
BstMWI GCNNNNNNNGC 1 cut(s) 229
BstNI CCWGG 2 cut(s) 589, 598
BstSCI CCNGG 2 cut(s) 587, 596
BstSFI CTRYAG 1 cut(s) 627
BstV2I GAAGAC 1 cut(s) 608
BstX2I RGATCY 1 cut(s) 1021
BstYI RGATCY 1 cut(s) 1021
Bsu36I CCTNAGG 1 cut(s) 18
BsuI GTATCC 1 cut(s) 232
BsuRI GGCC 1 cut(s) 746
BtgI CCRYGG 1 cut(s) 564
BtrI CACGTC 1 cut(s) 1117
BtsCI GGATG 2 cut(s) 102, 322
BtsIMutI CAGTG 1 cut(s) 223
BveI ACCTGC 1 cut(s) 442
Cac8I GCNNGC 1 cut(s) 270
CfoI GCGC 2 cut(s) 194, 355
Cfr13I GGNCC 1 cut(s) 644
Csp6I GTAC 4 cut(s) 656, 801, 916, 1132
CspCI CAANNNNNGTGG 2 cut(s) 943, 978
CviAII CATG 5 cut(s) 93, 399, 903, 995, 1078
CviQI GTAC 4 cut(s) 656, 801, 916, 1132
DdeI CTNAG 5 cut(s) 18, 188, 453, 977, 1026
DpnI GATC 5 cut(s) 216, 312, 537, 939, 1023
DpnII GATC 5 cut(s) 214, 310, 535, 937, 1021
EaeI YGGCCR 1 cut(s) 744
Eam1104I CTCTTC 1 cut(s) 531
EarI CTCTTC 1 cut(s) 531
Eco24I GRGCYC 2 cut(s) 342, 596
Eco47I GGWCC 1 cut(s) 644
Eco47III AGCGCT 1 cut(s) 193
Eco81I CCTNAGG 1 cut(s) 18
EcoRI GAATTC 1 cut(s) 248
EcoRII CCWGG 2 cut(s) 587, 596
EcoT22I ATGCAT 1 cut(s) 470
EcoT38I GRGCYC 2 cut(s) 342, 596
FaeI CATG 5 cut(s) 96, 402, 906, 998, 1081
FaqI GGGAC 2 cut(s) 535, 833
FatI CATG 5 cut(s) 92, 398, 902, 994, 1077
FauNDI CATATG 3 cut(s) 344, 681, 869
FbaI TGATCA 1 cut(s) 535
FokI GGATG 2 cut(s) 109, 329
FriOI GRGCYC 2 cut(s) 342, 596
FspBI CTAG 2 cut(s) 80, 426
GlaI GCGC 2 cut(s) 193, 354
GsaI CCCAGC 1 cut(s) 930
HaeII RGCGCY 1 cut(s) 195
HaeIII GGCC 1 cut(s) 746
HhaI GCGC 2 cut(s) 194, 355
Hin1II CATG 5 cut(s) 96, 402, 906, 998, 1081
Hin6I GCGC 2 cut(s) 192, 353
HinP1I GCGC 2 cut(s) 192, 353
HindIII AAGCTT 1 cut(s) 780
HinfI GANTC 9 cut(s) 36, 485, 523, 555, 604, 821, 899, 1082, 1096
HphI GGTGA 2 cut(s) 266, 778
Hpy166II GTNNAC 1 cut(s) 577
Hpy188I TCNGA 8 cut(s) 7, 214, 326, 367, 544, 707, 978, 1052
Hpy188III TCNNGA 7 cut(s) 17, 314, 530, 552, 608, 776, 935
Hpy8I GTNNAC 1 cut(s) 577
HpyAV CCTTC 1 cut(s) 130
HpyCH4III ACNGT 1 cut(s) 565
HpyCH4IV ACGT 1 cut(s) 1116
HpyCH4V TGCA 9 cut(s) 87, 223, 232, 272, 320, 468, 637, 679, 787
HpyF10VI GCNNNNNNNGC 1 cut(s) 229
HpyF3I CTNAG 5 cut(s) 18, 188, 453, 977, 1026
HpySE526I ACGT 1 cut(s) 1116
Hsp92II CATG 5 cut(s) 96, 402, 906, 998, 1081
HspAI GCGC 2 cut(s) 192, 353
Ksp22I TGATCA 1 cut(s) 535
Kzo9I GATC 5 cut(s) 214, 310, 535, 937, 1021
LmnI GCTCC 1 cut(s) 599
LweI GCATC 3 cut(s) 160, 307, 601
MaeI CTAG 2 cut(s) 80, 426
MaeII ACGT 1 cut(s) 1116
MaeIII GTNAC 6 cut(s) 99, 280, 520, 863, 892, 980
MalI GATC 5 cut(s) 216, 312, 537, 939, 1023
MboI GATC 5 cut(s) 214, 310, 535, 937, 1021
MboII GAAGA 2 cut(s) 518, 613
MfeI CAATTG 1 cut(s) 1153
MflI RGATCY 1 cut(s) 1021
MhlI GDGCHC 2 cut(s) 342, 596
MlsI TGGCCA 1 cut(s) 746
MluCI AATT 5 cut(s) 248, 387, 516, 752, 1153
MluNI TGGCCA 1 cut(s) 746
MlyI GAGTC 5 cut(s) 517, 598, 815, 908, 1105
MmeI TCCRAC 2 cut(s) 304, 685
Mox20I TGGCCA 1 cut(s) 746
Mph1103I ATGCAT 1 cut(s) 470
MroXI GAANNNNTTC 1 cut(s) 1012
MscI TGGCCA 1 cut(s) 746
MseI TTAA 4 cut(s) 386, 698, 837, 1004
MslI CAYNNNNRTG 2 cut(s) 495, 1119
Msp20I TGGCCA 1 cut(s) 746
MspR9I CCNGG 2 cut(s) 589, 598
MunI CAATTG 1 cut(s) 1153
Mva1269I GAATGC 1 cut(s) 470
MvaI CCWGG 2 cut(s) 589, 598
MwoI GCNNNNNNNGC 1 cut(s) 229
NdeI CATATG 3 cut(s) 344, 681, 869
NdeII GATC 5 cut(s) 214, 310, 535, 937, 1021
NlaIII CATG 5 cut(s) 96, 402, 906, 998, 1081
NlaIV GGNNCC 3 cut(s) 395, 595, 1023
NmuCI GTSAC 6 cut(s) 99, 280, 520, 863, 892, 980
NsiI ATGCAT 1 cut(s) 470
PaqCI CACCTGC 1 cut(s) 442
PctI GAATGC 1 cut(s) 470
PdmI GAANNNNTTC 1 cut(s) 1012
PfeI GAWTC 4 cut(s) 36, 485, 555, 1082
PflFI GACNNNGTC 2 cut(s) 278, 1115
PfoI TCCNGGA 1 cut(s) 596
PleI GAGTC 5 cut(s) 517, 598, 815, 907, 1104
PpsI GAGTC 5 cut(s) 517, 598, 815, 907, 1104
Psp6I CCWGG 2 cut(s) 587, 596
PspFI CCCAGC 1 cut(s) 926
PspGI CCWGG 2 cut(s) 587, 596
PspN4I GGNNCC 3 cut(s) 395, 595, 1023
PspPI GGNCC 1 cut(s) 644
PsuI RGATCY 1 cut(s) 1021
PsyI GACNNNGTC 2 cut(s) 278, 1115
RsaI GTAC 4 cut(s) 657, 802, 917, 1133
RsaNI GTAC 4 cut(s) 656, 801, 916, 1132
RseI CAYNNNNRTG 2 cut(s) 495, 1119
SaqAI TTAA 4 cut(s) 386, 698, 837, 1004
Sau3AI GATC 5 cut(s) 214, 310, 535, 937, 1021
Sau96I GGNCC 1 cut(s) 644
SchI GAGTC 5 cut(s) 517, 598, 815, 908, 1105
ScrFI CCNGG 2 cut(s) 589, 598
SduI GDGCHC 2 cut(s) 342, 596
SfaNI GCATC 3 cut(s) 160, 307, 601
SfcI CTRYAG 1 cut(s) 627
SinI GGWCC 1 cut(s) 644
SmiMI CAYNNNNRTG 2 cut(s) 495, 1119
Sse9I AATT 5 cut(s) 248, 387, 516, 752, 1153
SspMI CTAG 2 cut(s) 80, 426
StyD4I CCNGG 2 cut(s) 587, 596
TaaI ACNGT 1 cut(s) 565
TaiI ACGT 1 cut(s) 1119
TaqI TCGA 2 cut(s) 150, 309
TasI AATT 5 cut(s) 248, 387, 516, 752, 1153
TatI WGTACW 2 cut(s) 655, 915
TfiI GAWTC 4 cut(s) 36, 485, 555, 1082
Tru1I TTAA 4 cut(s) 386, 698, 837, 1004
Tru9I TTAA 4 cut(s) 386, 698, 837, 1004
TscAI CASTG 1 cut(s) 230
TseFI GTSAC 6 cut(s) 99, 280, 520, 863, 892, 980
Tsp45I GTSAC 6 cut(s) 99, 280, 520, 863, 892, 980
TspDTI ATGAA 6 cut(s) 112, 477, 715, 723, 893, 1066
TspRI CASTG 1 cut(s) 230
Tth111I GACNNNGTC 2 cut(s) 278, 1115
VpaK11BI GGWCC 1 cut(s) 644
XapI RAATTY 1 cut(s) 248
XmnI GAANNNNTTC 1 cut(s) 1012
XspI CTAG 2 cut(s) 80, 426
Zsp2I ATGCAT 1 cut(s) 470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.