A Receptor for Ubiquitination Targets
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 209, 588 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 135 |
| AccII | CGCG | 1 cut(s) | 478 |
| AccIII | TCCGGA | 1 cut(s) | 576 |
| AcsI | RAATTY | 1 cut(s) | 415 |
| AfaI | GTAC | 3 cut(s) | 72, 302, 674 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 135 |
| AflIII | ACRYGT | 1 cut(s) | 476 |
| AgsI | TTSAA | 2 cut(s) | 38, 397 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 480 |
| AleI | CACNNNNGTG | 1 cut(s) | 122 |
| AluBI | AGCT | 4 cut(s) | 20, 104, 162, 310 |
| AluI | AGCT | 4 cut(s) | 20, 104, 162, 310 |
| Alw26I | GTCTC | 2 cut(s) | 82, 237 |
| Aor13HI | TCCGGA | 1 cut(s) | 576 |
| AoxI | GGCC | 1 cut(s) | 549 |
| ApeKI | GCWGC | 2 cut(s) | 17, 390 |
| ApoI | RAATTY | 1 cut(s) | 415 |
| AspLEI | GCGC | 2 cut(s) | 336, 390 |
| AspS9I | GGNCC | 1 cut(s) | 549 |
| AsuC2I | CCSGG | 1 cut(s) | 689 |
| AsuHPI | GGTGA | 3 cut(s) | 455, 529, 634 |
| AxyI | CCTNAGG | 2 cut(s) | 60, 495 |
| BaeGI | GKGCMC | 1 cut(s) | 593 |
| BanI | GGYRCC | 2 cut(s) | 209, 588 |
| BbvCI | CCTCAGC | 1 cut(s) | 179 |
| BbvI | GCAGC | 2 cut(s) | 29, 377 |
| BccI | CCATC | 3 cut(s) | 197, 395, 440 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 218, 252 |
| BciVI | GTATCC | 2 cut(s) | 327, 584 |
| BclI | TGATCA | 1 cut(s) | 108 |
| BcnI | CCSGG | 1 cut(s) | 689 |
| BcoDI | GTCTC | 2 cut(s) | 82, 237 |
| BfaI | CTAG | 3 cut(s) | 21, 311, 654 |
| BfoI | RGCGCY | 1 cut(s) | 391 |
| BfuI | GTATCC | 2 cut(s) | 327, 584 |
| BisI | GCNGC | 2 cut(s) | 18, 391 |
| BlsI | GCNGC | 2 cut(s) | 19, 392 |
| BmcAI | AGTACT | 1 cut(s) | 302 |
| Bme1390I | CCNGG | 1 cut(s) | 689 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 480 |
| BmgT120I | GGNCC | 1 cut(s) | 549 |
| BmiI | GGNNCC | 2 cut(s) | 211, 590 |
| BmrFI | CCNGG | 1 cut(s) | 689 |
| BmrI | ACTGGG | 1 cut(s) | 685 |
| BmsI | GCATC | 3 cut(s) | 104, 543, 682 |
| BmuI | ACTGGG | 1 cut(s) | 685 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 79, 111 |
| Bpu10I | CCTNAGC | 1 cut(s) | 179 |
| BpuMI | CCSGG | 1 cut(s) | 689 |
| Bsa29I | ATCGAT | 1 cut(s) | 192 |
| BsaJI | CCNNGG | 2 cut(s) | 120, 134 |
| BsaWI | WCCGGW | 1 cut(s) | 576 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 135 |
| Bse1I | ACTGG | 3 cut(s) | 202, 251, 680 |
| Bse21I | CCTNAGG | 2 cut(s) | 60, 495 |
| Bse3DI | GCAATG | 2 cut(s) | 48, 456 |
| BseAI | TCCGGA | 1 cut(s) | 576 |
| BseCI | ATCGAT | 1 cut(s) | 192 |
| BseDI | CCNNGG | 2 cut(s) | 120, 134 |
| BseGI | GGATG | 1 cut(s) | 697 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 135 |
| BseMI | GCAATG | 2 cut(s) | 48, 456 |
| BseMII | CTCAG | 2 cut(s) | 193, 486 |
| BseNI | ACTGG | 3 cut(s) | 202, 251, 680 |
| BseSI | GKGCMC | 1 cut(s) | 593 |
| BseXI | GCAGC | 2 cut(s) | 29, 377 |
| Bsh1236I | CGCG | 1 cut(s) | 478 |
| BshFI | GGCC | 1 cut(s) | 551 |
| BshNI | GGYRCC | 2 cut(s) | 209, 588 |
| BshVI | ATCGAT | 1 cut(s) | 192 |
| BsiSI | CCGG | 2 cut(s) | 577, 688 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 135 |
| BsmAI | GTCTC | 2 cut(s) | 82, 237 |
| BsnI | GGCC | 1 cut(s) | 551 |
| Bsp1286I | GDGCHC | 1 cut(s) | 593 |
| Bsp13I | TCCGGA | 1 cut(s) | 576 |
| Bsp143I | GATC | 1 cut(s) | 108 |
| BspANI | GGCC | 1 cut(s) | 551 |
| BspCNI | CTCAG | 2 cut(s) | 192, 487 |
| BspDI | ATCGAT | 1 cut(s) | 192 |
| BspEI | TCCGGA | 1 cut(s) | 576 |
| BspFNI | CGCG | 1 cut(s) | 478 |
| BspLI | GGNNCC | 2 cut(s) | 211, 590 |
| BspT107I | GGYRCC | 2 cut(s) | 209, 588 |
| BsrDI | GCAATG | 2 cut(s) | 48, 456 |
| BsrI | ACTGG | 3 cut(s) | 202, 251, 680 |
| BssECI | CCNNGG | 2 cut(s) | 120, 134 |
| BssMI | GATC | 1 cut(s) | 108 |
| BssT1I | CCWWGG | 1 cut(s) | 134 |
| Bst4CI | ACNGT | 3 cut(s) | 443, 572, 619 |
| BstC8I | GCNNGC | 2 cut(s) | 308, 381 |
| BstDEI | CTNAG | 3 cut(s) | 60, 179, 495 |
| BstF5I | GGATG | 1 cut(s) | 697 |
| BstFNI | CGCG | 1 cut(s) | 478 |
| BstH2I | RGCGCY | 1 cut(s) | 391 |
| BstHHI | GCGC | 2 cut(s) | 336, 390 |
| BstKTI | GATC | 1 cut(s) | 111 |
| BstMAI | GTCTC | 2 cut(s) | 82, 237 |
| BstMBI | GATC | 1 cut(s) | 108 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 168, 385, 597 |
| BstNSI | RCATGY | 1 cut(s) | 673 |
| BstSCI | CCNGG | 1 cut(s) | 687 |
| BstSLI | GKGCMC | 1 cut(s) | 593 |
| BstUI | CGCG | 1 cut(s) | 478 |
| BstV1I | GCAGC | 2 cut(s) | 29, 377 |
| Bsu15I | ATCGAT | 1 cut(s) | 192 |
| Bsu36I | CCTNAGG | 2 cut(s) | 60, 495 |
| BsuI | GTATCC | 2 cut(s) | 327, 584 |
| BsuRI | GGCC | 1 cut(s) | 551 |
| BsuTUI | ATCGAT | 1 cut(s) | 192 |
| BtsCI | GGATG | 1 cut(s) | 697 |
| BtsIMutI | CAGTG | 2 cut(s) | 258, 624 |
| Cac8I | GCNNGC | 2 cut(s) | 308, 381 |
| CfoI | GCGC | 2 cut(s) | 336, 390 |
| Cfr13I | GGNCC | 1 cut(s) | 549 |
| ClaI | ATCGAT | 1 cut(s) | 192 |
| CseI | GACGC | 1 cut(s) | 484 |
| Csp6I | GTAC | 3 cut(s) | 71, 301, 673 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 417, 452 |
| CviAII | CATG | 6 cut(s) | 74, 145, 287, 384, 546, 670 |
| CviJI | RGCY | 9 cut(s) | 20, 104, 133, 162, 183, 310, 379, 551, 600 |
| CviKI_1 | RGCY | 9 cut(s) | 20, 104, 133, 162, 183, 310, 379, 551, 600 |
| CviQI | GTAC | 3 cut(s) | 71, 301, 673 |
| DdeI | CTNAG | 3 cut(s) | 60, 179, 495 |
| DpnI | GATC | 1 cut(s) | 110 |
| DpnII | GATC | 1 cut(s) | 108 |
| DriI | GACNNNNNGTC | 1 cut(s) | 480 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 480 |
| Eco130I | CCWWGG | 1 cut(s) | 134 |
| Eco32I | GATATC | 1 cut(s) | 79 |
| Eco81I | CCTNAGG | 2 cut(s) | 60, 495 |
| EcoRV | GATATC | 1 cut(s) | 79 |
| EcoT14I | CCWWGG | 1 cut(s) | 134 |
| ErhI | CCWWGG | 1 cut(s) | 134 |
| FaeI | CATG | 6 cut(s) | 77, 148, 290, 387, 549, 673 |
| FatI | CATG | 6 cut(s) | 73, 144, 286, 383, 545, 669 |
| FauNDI | CATATG | 1 cut(s) | 512 |
| FbaI | TGATCA | 1 cut(s) | 108 |
| Fnu4HI | GCNGC | 2 cut(s) | 18, 391 |
| Fsp4HI | GCNGC | 2 cut(s) | 18, 391 |
| FspBI | CTAG | 3 cut(s) | 21, 311, 654 |
| GlaI | GCGC | 2 cut(s) | 335, 389 |
| GluI | GCNGC | 2 cut(s) | 18, 391 |
| HaeII | RGCGCY | 1 cut(s) | 391 |
| HaeIII | GGCC | 1 cut(s) | 551 |
| HapII | CCGG | 2 cut(s) | 577, 688 |
| HgaI | GACGC | 1 cut(s) | 484 |
| HhaI | GCGC | 2 cut(s) | 336, 390 |
| Hin1II | CATG | 6 cut(s) | 77, 148, 290, 387, 549, 673 |
| Hin6I | GCGC | 2 cut(s) | 334, 388 |
| HinP1I | GCGC | 2 cut(s) | 334, 388 |
| HindIII | AAGCTT | 2 cut(s) | 102, 160 |
| HinfI | GANTC | 1 cut(s) | 542 |
| HpaII | CCGG | 2 cut(s) | 577, 688 |
| HphI | GGTGA | 3 cut(s) | 455, 529, 634 |
| Hpy166II | GTNNAC | 3 cut(s) | 361, 439, 468 |
| Hpy188I | TCNGA | 1 cut(s) | 113 |
| Hpy188III | TCNNGA | 6 cut(s) | 469, 494, 506, 577, 635, 654 |
| Hpy8I | GTNNAC | 3 cut(s) | 361, 439, 468 |
| Hpy99I | CGWCG | 3 cut(s) | 475, 478, 669 |
| HpyAV | CCTTC | 1 cut(s) | 233 |
| HpyCH4III | ACNGT | 3 cut(s) | 443, 572, 619 |
| HpyCH4IV | ACGT | 1 cut(s) | 664 |
| HpyCH4V | TGCA | 4 cut(s) | 117, 229, 274, 306 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 168, 385, 597 |
| HpyF3I | CTNAG | 3 cut(s) | 60, 179, 495 |
| HpySE526I | ACGT | 1 cut(s) | 664 |
| Hsp92II | CATG | 6 cut(s) | 77, 148, 290, 387, 549, 673 |
| HspAI | GCGC | 2 cut(s) | 334, 388 |
| Kpn2I | TCCGGA | 1 cut(s) | 576 |
| Ksp22I | TGATCA | 1 cut(s) | 108 |
| Kzo9I | GATC | 1 cut(s) | 108 |
| LmnI | GCTCC | 1 cut(s) | 256 |
| LpnPI | CCDG | 7 cut(s) | 215, 264, 365, 507, 590, 648, 661 |
| Lsp1109I | GCAGC | 2 cut(s) | 29, 377 |
| LweI | GCATC | 3 cut(s) | 104, 543, 682 |
| MaeI | CTAG | 3 cut(s) | 21, 311, 654 |
| MaeII | ACGT | 1 cut(s) | 664 |
| MalI | GATC | 1 cut(s) | 110 |
| MboI | GATC | 1 cut(s) | 108 |
| MboII | GAAGA | 1 cut(s) | 338 |
| MfeI | CAATTG | 1 cut(s) | 429 |
| MhlI | GDGCHC | 1 cut(s) | 593 |
| MluCI | AATT | 5 cut(s) | 11, 262, 415, 429, 487 |
| MluI | ACGCGT | 1 cut(s) | 476 |
| MnlI | CCTC | 5 cut(s) | 105, 130, 188, 490, 532 |
| MroI | TCCGGA | 1 cut(s) | 576 |
| MseI | TTAA | 1 cut(s) | 198 |
| MslI | CAYNNNNRTG | 3 cut(s) | 122, 461, 515 |
| MspI | CCGG | 2 cut(s) | 577, 688 |
| MspR9I | CCNGG | 1 cut(s) | 689 |
| MunI | CAATTG | 1 cut(s) | 429 |
| MvnI | CGCG | 1 cut(s) | 478 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 168, 385, 597 |
| NciI | CCSGG | 1 cut(s) | 689 |
| NdeI | CATATG | 1 cut(s) | 512 |
| NdeII | GATC | 1 cut(s) | 108 |
| NlaIII | CATG | 6 cut(s) | 77, 148, 290, 387, 549, 673 |
| NlaIV | GGNNCC | 2 cut(s) | 211, 590 |
| NspI | RCATGY | 1 cut(s) | 673 |
| OliI | CACNNNNGTG | 1 cut(s) | 122 |
| PfeI | GAWTC | 1 cut(s) | 542 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 135 |
| PfoI | TCCNGGA | 1 cut(s) | 687 |
| PkrI | GCNGC | 2 cut(s) | 19, 392 |
| PspN4I | GGNNCC | 2 cut(s) | 211, 590 |
| PspPI | GGNCC | 1 cut(s) | 549 |
| RsaI | GTAC | 3 cut(s) | 72, 302, 674 |
| RsaNI | GTAC | 3 cut(s) | 71, 301, 673 |
| RseI | CAYNNNNRTG | 3 cut(s) | 122, 461, 515 |
| SaqAI | TTAA | 1 cut(s) | 198 |
| SatI | GCNGC | 2 cut(s) | 18, 391 |
| Sau3AI | GATC | 1 cut(s) | 108 |
| Sau96I | GGNCC | 1 cut(s) | 549 |
| ScaI | AGTACT | 1 cut(s) | 302 |
| ScrFI | CCNGG | 1 cut(s) | 689 |
| SduI | GDGCHC | 1 cut(s) | 593 |
| SetI | ASST | 8 cut(s) | 22, 97, 106, 122, 164, 180, 312, 667 |
| SfaNI | GCATC | 3 cut(s) | 104, 543, 682 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 122, 461, 515 |
| Sse9I | AATT | 5 cut(s) | 11, 262, 415, 429, 487 |
| SspMI | CTAG | 3 cut(s) | 21, 311, 654 |
| StyD4I | CCNGG | 1 cut(s) | 687 |
| StyI | CCWWGG | 1 cut(s) | 134 |
| TaaI | ACNGT | 3 cut(s) | 443, 572, 619 |
| TaiI | ACGT | 1 cut(s) | 667 |
| TaqI | TCGA | 2 cut(s) | 192, 537 |
| TasI | AATT | 5 cut(s) | 11, 262, 415, 429, 487 |
| TatI | WGTACW | 2 cut(s) | 300, 672 |
| TfiI | GAWTC | 1 cut(s) | 542 |
| Tru1I | TTAA | 1 cut(s) | 198 |
| Tru9I | TTAA | 1 cut(s) | 198 |
| TscAI | CASTG | 2 cut(s) | 258, 624 |
| TseI | GCWGC | 2 cut(s) | 17, 390 |
| TspDTI | ATGAA | 5 cut(s) | 23, 362, 409, 534, 536 |
| TspRI | CASTG | 2 cut(s) | 258, 624 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 135 |
| XapI | RAATTY | 1 cut(s) | 415 |
| XbaI | TCTAGA | 1 cut(s) | 653 |
| XceI | RCATGY | 1 cut(s) | 673 |
| XspI | CTAG | 3 cut(s) | 21, 311, 654 |
| ZrmI | AGTACT | 1 cut(s) | 302 |