FvH4_5g11823

F-box and associated interaction domains-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000068
Physical Location & Seq
Forward (+)
6698961 .. 6700133
1173 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g11823.t1

Sequence Viewer

Length: 1173 bp
ATGTCAGGTTACTTTGTTCCTGAAGAAATCATTCATGAAATTCTGCTGCGGTTGCCAGCCAAATCTTTAGTGAGATTCAGCACCGTGTGCAAGTCATGGAGCTCTATGATCACACGCTCCAGTTTCATTGACACCCATCTCAAGCGCAGAGGTCAATACAACAAGCAAAACGGCATCGTTCACCTTCTACTATGCGAGCACTTCACTGCGAGAAGTTGCACGTCGTATGTGATGAAAGACGACCCTGCAATATTGACCGGAGATGAGTGCTATACCAAGTTTACATATCCTTCAATATTCAAACATTCATATGCGAGTCTGATCGGAACTTGTAACGGTCTCATATGTCTTACAGATCACCATTCGCCCAGGACGACTTCCAAAGTTTCCACAATAATTTGGAACCCTTCAATCAGAAAGATTGTGATTTTGCCTAGGCCTAGTATCAAGTCTCCAACAATTTGTATGCAAACTCATCATGCTTTTGGTTTTGGCTATGATGCTCAGAGCAACGATTATAAGGTTTTAAGAATTCTAAAGTCTGAGGATGAAAGATTGGTGACAAAACTACGTGAGGTTGAGGTTTACTCATTAGCCCGTAATACTTGGAAGCGTCTCAGTTGTGATACTTTTCCGGCTTGCTTGAAATCTGTTAGATGGTGTACAGGTAAATACGTTTTTGTCAACAATGCTCTACATTGGGCTCAATACCGGGATTCCGAGATGGAAAAGTACATCATTGTGTCGTTTGATATGGCCGGAGAATTATTTAGTGAGATAGAGATGCCGGAAGCTTTGTCGAATGAACCCAAGAACCTGATTTTAGTAGCAAGATATGGAGAGTCCCTTGCCTTGATTGATGTTAAGAGCGGTTTTGACATATGGGTCATGAAAGAGTATGGTGTGGTGCAATCTTGGACTAAAATAGCAAGGATATCGTGTGAAAAGTTTCGTTCTCTTTCACTTTTTGATTGTAAAAGCTGCGGCGAATTGGTGTTCGGAATAATAGAAGAAACAACAACTGGTCGTGGAGGGTTACGCAGGGTGAATTATCAGACCAACCAAGTTGAAAAATTTAGAATAGATGTAGAAAAGTACAAGGGGATCGATTCGTTTGTAGATAGCATAGTCTTACTAGATCAAATCAATGCTATATATTCCTTGCAATCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

391

Amino Acids

44.73

Weight (kDa)

8.67

Isoelectric Point (pI)

50.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 7 - 42 4.1e-10 F-box domain
F-box-like PF12937 7 - 40 9.6e-08 F-box-like
FBA_3 PF08268 102 - 363 2.4e-24 F-box associated beta propeller domain
FBA_1 PF07734 102 - 320 6.2e-23 F-box associated beta propeller domain
Beta-prop_AT5G49610-like PF23635 109 - 316 5.9e-08 F-box protein AT5G49610-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 519
AasI GACNNNNNNGTC 1 cut(s) 884
AccBSI CCGCTC 1 cut(s) 870
AciI CCGC 3 cut(s) 49, 870, 984
AclWI GGATC 1 cut(s) 1112
AcoI YGGCCR 1 cut(s) 756
AcsI RAATTY 3 cut(s) 39, 531, 1073
AcuI CTGAAG 1 cut(s) 42
AdeI CACNNNGTG 1 cut(s) 87
AfaI GTAC 3 cut(s) 664, 734, 1097
AgsI TTSAA 5 cut(s) 294, 301, 411, 646, 1070
AjiI CACGTC 1 cut(s) 222
AjnI CCWGG 1 cut(s) 368
AluBI AGCT 3 cut(s) 102, 794, 981
AluI AGCT 3 cut(s) 102, 794, 981
Alw21I GWGCWC 2 cut(s) 104, 201
Alw26I GTCTC 3 cut(s) 344, 456, 620
AlwI GGATC 1 cut(s) 1112
AoxI GGCC 2 cut(s) 437, 756
ApeKI GCWGC 2 cut(s) 46, 981
ApoI RAATTY 3 cut(s) 39, 531, 1073
Asp700I GAANNNNTTC 2 cut(s) 30, 948
AspA2I CCTAGG 1 cut(s) 434
AspLEI GCGC 1 cut(s) 147
AsuC2I CCSGG 1 cut(s) 713
AsuHPI GGTGA 4 cut(s) 173, 350, 571, 1057
AvrII CCTAGG 1 cut(s) 434
BanII GRGCYC 2 cut(s) 104, 706
Bbv12I GWGCWC 2 cut(s) 104, 201
BbvI GCAGC 2 cut(s) 33, 968
BccI CCATC 3 cut(s) 144, 651, 718
BceAI ACGGC 1 cut(s) 187
BcgI CGANNNNNNTGC 2 cut(s) 918, 952
BciT130I CCWGG 1 cut(s) 370
BclI TGATCA 1 cut(s) 108
BcnI CCSGG 1 cut(s) 713
BcoDI GTCTC 3 cut(s) 344, 456, 620
BfaI CTAG 3 cut(s) 435, 441, 1136
BisI GCNGC 3 cut(s) 47, 982, 985
BlnI CCTAGG 1 cut(s) 434
BlsI GCNGC 3 cut(s) 48, 983, 986
Bme1390I CCNGG 2 cut(s) 370, 713
BmgBI CACGTC 1 cut(s) 222
BmiI GGNNCC 1 cut(s) 404
BmrFI CCNGG 2 cut(s) 370, 713
BmsI GCATC 3 cut(s) 183, 490, 774
BplI GAGNNNNNCTC 2 cut(s) 572, 604
BpmI CTGGAG 1 cut(s) 103
BpuEI CTTGAG 1 cut(s) 125
BpuMI CCSGG 1 cut(s) 713
Bsa29I ATCGAT 1 cut(s) 1107
BsaAI YACGTR 1 cut(s) 572
BsaI GGTCTC 1 cut(s) 344
BsaJI CCNNGG 2 cut(s) 368, 434
BsaWI WCCGGW 1 cut(s) 257
Bse1I ACTGG 2 cut(s) 120, 1027
BseBI CCWGG 1 cut(s) 370
BseCI ATCGAT 1 cut(s) 1107
BseDI CCNNGG 2 cut(s) 368, 434
BseGI GGATG 1 cut(s) 553
BseMII CTCAG 3 cut(s) 518, 534, 631
BseNI ACTGG 2 cut(s) 120, 1027
BseXI GCAGC 2 cut(s) 33, 968
BshFI GGCC 2 cut(s) 439, 758
BshVI ATCGAT 1 cut(s) 1107
BsiHKAI GWGCWC 2 cut(s) 104, 201
BsiSI CCGG 5 cut(s) 258, 635, 712, 759, 788
BslFI GGGAC 1 cut(s) 829
BsmAI GTCTC 3 cut(s) 344, 456, 620
BsmBI CGTCTC 1 cut(s) 620
BsmFI GGGAC 1 cut(s) 829
BsnI GGCC 2 cut(s) 439, 758
Bso31I GGTCTC 1 cut(s) 344
Bsp1286I GDGCHC 3 cut(s) 104, 201, 706
Bsp1407I TGTACA 1 cut(s) 662
Bsp143I GATC 5 cut(s) 108, 321, 355, 1104, 1138
BspACI CCGC 3 cut(s) 49, 870, 984
BspANI GGCC 2 cut(s) 439, 758
BspCNI CTCAG 3 cut(s) 517, 535, 630
BspDI ATCGAT 1 cut(s) 1107
BspHI TCATGA 2 cut(s) 34, 888
BspLI GGNNCC 1 cut(s) 404
BspPI GGATC 1 cut(s) 1112
BspTNI GGTCTC 1 cut(s) 344
BsrBI CCGCTC 1 cut(s) 870
BsrGI TGTACA 1 cut(s) 662
BsrI ACTGG 2 cut(s) 120, 1027
BssECI CCNNGG 2 cut(s) 368, 434
BssMI GATC 5 cut(s) 108, 321, 355, 1104, 1138
BssT1I CCWWGG 1 cut(s) 434
Bst2UI CCWGG 1 cut(s) 370
Bst4CI ACNGT 2 cut(s) 85, 338
BstAPI GCANNNNNTGC 1 cut(s) 87
BstAUI TGTACA 1 cut(s) 662
BstBAI YACGTR 1 cut(s) 572
BstC8I GCNNGC 3 cut(s) 57, 197, 640
BstDEI CTNAG 3 cut(s) 504, 543, 617
BstF5I GGATG 1 cut(s) 553
BstHHI GCGC 1 cut(s) 147
BstKTI GATC 5 cut(s) 111, 324, 358, 1107, 1141
BstMAI GTCTC 3 cut(s) 344, 456, 620
BstMBI GATC 5 cut(s) 108, 321, 355, 1104, 1138
BstMWI GCNNNNNNNGC 2 cut(s) 52, 87
BstNI CCWGG 1 cut(s) 370
BstSCI CCNGG 2 cut(s) 368, 711
BstV1I GCAGC 2 cut(s) 33, 968
Bsu15I ATCGAT 1 cut(s) 1107
BsuRI GGCC 2 cut(s) 439, 758
BsuTUI ATCGAT 1 cut(s) 1107
BtrI CACGTC 1 cut(s) 222
BtsCI GGATG 1 cut(s) 553
BtsI GCAGTG 1 cut(s) 204
BtsIMutI CAGTG 1 cut(s) 204
Cac8I GCNNGC 3 cut(s) 57, 197, 640
CciI TCATGA 2 cut(s) 34, 888
CfoI GCGC 1 cut(s) 147
ClaI ATCGAT 1 cut(s) 1107
CseI GACGC 1 cut(s) 602
Csp6I GTAC 3 cut(s) 663, 733, 1096
CviAII CATG 4 cut(s) 35, 96, 479, 889
CviQI GTAC 3 cut(s) 663, 733, 1096
DdeI CTNAG 3 cut(s) 504, 543, 617
DpnI GATC 5 cut(s) 110, 323, 357, 1106, 1140
DpnII GATC 5 cut(s) 108, 321, 355, 1104, 1138
DraIII CACNNNGTG 1 cut(s) 87
DrdI GACNNNNNNGTC 1 cut(s) 884
DseDI GACNNNNNNGTC 1 cut(s) 884
EaeI YGGCCR 1 cut(s) 756
Ecl136II GAGCTC 1 cut(s) 102
Eco130I CCWWGG 1 cut(s) 434
Eco147I AGGCCT 1 cut(s) 439
Eco24I GRGCYC 2 cut(s) 104, 706
Eco31I GGTCTC 1 cut(s) 344
Eco32I GATATC 1 cut(s) 936
Eco53kI GAGCTC 1 cut(s) 102
Eco57I CTGAAG 1 cut(s) 42
EcoICRI GAGCTC 1 cut(s) 102
EcoRI GAATTC 1 cut(s) 531
EcoRII CCWGG 1 cut(s) 368
EcoRV GATATC 1 cut(s) 936
EcoT14I CCWWGG 1 cut(s) 434
EcoT38I GRGCYC 2 cut(s) 104, 706
ErhI CCWWGG 1 cut(s) 434
Esp3I CGTCTC 1 cut(s) 620
FaeI CATG 4 cut(s) 38, 99, 482, 892
FaqI GGGAC 1 cut(s) 829
FatI CATG 4 cut(s) 34, 95, 478, 888
FauNDI CATATG 3 cut(s) 310, 344, 881
FbaI TGATCA 1 cut(s) 108
Fnu4HI GCNGC 3 cut(s) 47, 982, 985
FokI GGATG 1 cut(s) 560
FriOI GRGCYC 2 cut(s) 104, 706
Fsp4HI GCNGC 3 cut(s) 47, 982, 985
FspBI CTAG 3 cut(s) 435, 441, 1136
GlaI GCGC 1 cut(s) 146
GluI GCNGC 3 cut(s) 47, 982, 985
GsuI CTGGAG 1 cut(s) 103
HaeIII GGCC 2 cut(s) 439, 758
HapII CCGG 5 cut(s) 258, 635, 712, 759, 788
HgaI GACGC 1 cut(s) 602
HhaI GCGC 1 cut(s) 147
Hin1II CATG 4 cut(s) 38, 99, 482, 892
Hin6I GCGC 1 cut(s) 145
HinP1I GCGC 1 cut(s) 145
HincII GTYRAC 1 cut(s) 685
HindII GTYRAC 1 cut(s) 685
HindIII AAGCTT 1 cut(s) 792
HinfI GANTC 5 cut(s) 75, 316, 716, 842, 1109
HpaII CCGG 5 cut(s) 258, 635, 712, 759, 788
HphI GGTGA 4 cut(s) 173, 350, 571, 1057
Hpy166II GTNNAC 5 cut(s) 181, 282, 586, 663, 685
Hpy188I TCNGA 8 cut(s) 321, 326, 416, 507, 544, 721, 1001, 1056
Hpy188III TCNNGA 3 cut(s) 20, 35, 889
Hpy8I GTNNAC 5 cut(s) 181, 282, 586, 663, 685
Hpy99I CGWCG 1 cut(s) 226
HpyAV CCTTC 3 cut(s) 194, 300, 417
HpyCH4III ACNGT 2 cut(s) 85, 338
HpyCH4IV ACGT 3 cut(s) 221, 571, 675
HpyCH4V TGCA 6 cut(s) 90, 219, 248, 469, 910, 1165
HpyF10VI GCNNNNNNNGC 2 cut(s) 52, 87
HpyF3I CTNAG 3 cut(s) 504, 543, 617
HpySE526I ACGT 3 cut(s) 221, 571, 675
Hsp92II CATG 4 cut(s) 38, 99, 482, 892
HspAI GCGC 1 cut(s) 145
Ksp22I TGATCA 1 cut(s) 108
Kzo9I GATC 5 cut(s) 108, 321, 355, 1104, 1138
LmnI GCTCC 2 cut(s) 99, 122
Lsp1109I GCAGC 2 cut(s) 33, 968
LweI GCATC 3 cut(s) 183, 490, 774
MaeI CTAG 3 cut(s) 435, 441, 1136
MaeII ACGT 3 cut(s) 221, 571, 675
MaeIII GTNAC 4 cut(s) 8, 332, 559, 1035
MalI GATC 5 cut(s) 110, 323, 357, 1106, 1140
MbiI CCGCTC 1 cut(s) 870
MboI GATC 5 cut(s) 108, 321, 355, 1104, 1138
MboII GAAGA 2 cut(s) 35, 1022
MhlI GDGCHC 3 cut(s) 104, 201, 706
MluCI AATT 8 cut(s) 39, 396, 459, 531, 764, 989, 1048, 1073
MlyI GAGTC 2 cut(s) 325, 851
MmeI TCCRAC 1 cut(s) 479
MnlI CCTC 5 cut(s) 143, 538, 568, 574, 1025
MroXI GAANNNNTTC 2 cut(s) 30, 948
MseI TTAA 2 cut(s) 527, 864
MslI CAYNNNNRTG 2 cut(s) 309, 740
MspI CCGG 5 cut(s) 258, 635, 712, 759, 788
MspR9I CCNGG 2 cut(s) 370, 713
MvaI CCWGG 1 cut(s) 370
MwoI GCNNNNNNNGC 2 cut(s) 52, 87
NciI CCSGG 1 cut(s) 713
NdeI CATATG 3 cut(s) 310, 344, 881
NdeII GATC 5 cut(s) 108, 321, 355, 1104, 1138
NlaIII CATG 4 cut(s) 38, 99, 482, 892
NlaIV GGNNCC 1 cut(s) 404
NmuCI GTSAC 1 cut(s) 559
PagI TCATGA 2 cut(s) 34, 888
PceI AGGCCT 1 cut(s) 439
PcsI WCGNNNNNNNCGW 1 cut(s) 371
PdmI GAANNNNTTC 2 cut(s) 30, 948
PfeI GAWTC 3 cut(s) 75, 716, 1109
PkrI GCNGC 3 cut(s) 48, 983, 986
PleI GAGTC 2 cut(s) 324, 850
PpsI GAGTC 2 cut(s) 324, 850
Ppu21I YACGTR 1 cut(s) 572
PsiI TTATAA 1 cut(s) 519
Psp124BI GAGCTC 1 cut(s) 104
Psp6I CCWGG 1 cut(s) 368
PspGI CCWGG 1 cut(s) 368
PspN4I GGNNCC 1 cut(s) 404
RsaI GTAC 3 cut(s) 664, 734, 1097
RsaNI GTAC 3 cut(s) 663, 733, 1096
RseI CAYNNNNRTG 2 cut(s) 309, 740
SacI GAGCTC 1 cut(s) 104
SaqAI TTAA 2 cut(s) 527, 864
SatI GCNGC 3 cut(s) 47, 982, 985
Sau3AI GATC 5 cut(s) 108, 321, 355, 1104, 1138
SchI GAGTC 2 cut(s) 325, 851
ScrFI CCNGG 2 cut(s) 370, 713
SduI GDGCHC 3 cut(s) 104, 201, 706
SfaNI GCATC 3 cut(s) 183, 490, 774
SmiMI CAYNNNNRTG 2 cut(s) 309, 740
SmlI CTYRAG 1 cut(s) 140
SmoI CTYRAG 1 cut(s) 140
Sse9I AATT 8 cut(s) 39, 396, 459, 531, 764, 989, 1048, 1073
SseBI AGGCCT 1 cut(s) 439
SsiI CCGC 3 cut(s) 49, 870, 984
SspI AATATT 2 cut(s) 252, 297
SspMI CTAG 3 cut(s) 435, 441, 1136
SstI GAGCTC 1 cut(s) 104
StuI AGGCCT 1 cut(s) 439
StyD4I CCNGG 2 cut(s) 368, 711
StyI CCWWGG 1 cut(s) 434
TaaI ACNGT 2 cut(s) 85, 338
TaiI ACGT 3 cut(s) 224, 574, 678
TaqI TCGA 2 cut(s) 800, 1107
TasI AATT 8 cut(s) 39, 396, 459, 531, 764, 989, 1048, 1073
TatI WGTACW 3 cut(s) 662, 732, 1095
TauI GCSGC 1 cut(s) 987
TfiI GAWTC 3 cut(s) 75, 716, 1109
Tru1I TTAA 2 cut(s) 527, 864
Tru9I TTAA 2 cut(s) 527, 864
TscAI CASTG 1 cut(s) 211
TseFI GTSAC 1 cut(s) 559
TseI GCWGC 2 cut(s) 46, 981
Tsp45I GTSAC 1 cut(s) 559
TspDTI ATGAA 8 cut(s) 23, 51, 115, 248, 297, 564, 819, 905
TspRI CASTG 1 cut(s) 211
XapI RAATTY 3 cut(s) 39, 531, 1073
XmaJI CCTAGG 1 cut(s) 434
XmnI GAANNNNTTC 2 cut(s) 30, 948
XspI CTAG 3 cut(s) 435, 441, 1136
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.