FvH4_3g41900

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000068
Physical Location & Seq
Forward (+)
35075481 .. 35079780
4300 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g41900.t1

Sequence Viewer

Length: 1215 bp
ATGTCAGATTATCTTCCTCAGGAAGTGATAACCAATATCTTACTTAGGCTACCCATCAAGTCTTTGGTCATATGCACCTCGGTCTGCAAGTCATGGGGGTCTATGATTACGAACTCGAGCTTTATCCAAGCCCACCTCAGCCACAGAATCAACTTCAATAACCTCCATGGCACTCACCTCCTACTACTCCACGGGGTTTCTTGTCAAAATTACGGTAACAACTTTTTCCACCACGCGCACATCCACAATCTGAAGAAAGAGGTGTACTCTTTGCATTATGATAGCCATGTTTTTGATGAGTACTGCAAGATAGGATTTCAATCTCCAGTTGCTGATAGGAAAATGAGTAATGAGTGTTTCCGTGTGGTCGGCATTTGTAATGGGCTGGTATTCCTTGCAGATGATTTATCGCGTTTAGGTTACAACTTCATGATATGGAATCCGTCTATAAGAAAGTCAGTGATCCTTCCCAAGCCTGGCCTTAGATATGAGACTTTTGGTGGGTATAATGCTTGTCATGGGTTCGCATTTGATGCCATTATCAAAGACTATAAGGTTGTGAGGATTGTCGAGGAGGAACCTAGGGATCAAACATTTGTGGAGGTTTATTCATTAGCTGCAGGCTCGTGGAGTGACTCTAGGCTTGTTGATCCCCAATGTGGAATAAATATAGGCTCACCCCAGGCTTTTGTTAATGGGGCTCTTCACTGGGATGCACACCGTTTTAGAAGTAGCTCATATCGCTATTTTATACTGGCATTTGATGTGAGCAGCGAGTTATTTCGGGAGATGATGTTGCCAAAGAGTTTGGACCCGAATTTGGCCAGTTTCTTGTCATTGCAATTGTCTGTATCTGGAGATGGAAAATCCCTTGCTATGTTCGTGAGAGATTCTACAAGAAGTTCTTTTCTTGATATATGGGTGATGAAAGAGTATTCTGTGCAGGAGTCGTGGACCAAATTGTACAGTATCTATCCACAAGATCCAGCGGACAGTTTACTCAGACCACTATGTTTTAGGAAGAGTGGTGAAGTAGTGTTGGAAATATATCGTCGCCGGTATGGAGAGATAAAAACTGGAATTGAATTATTTTCACTAGACCTTGTGAGTGGACAACTCGAGCCTCTTGGCATTTCTAGATATCATTATCACACCATGGATCCTTACCATGAGAGCATTGTCTTACTTGACAGAAATGATGCGATCTTTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

405

Amino Acids

46.31

Weight (kDa)

6.62

Isoelectric Point (pI)

44.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 4 - 39 5.5e-07 F-box-like
F-box PF00646 5 - 41 1.5e-08 F-box domain
FBA_1 PF07734 85 - 323 1.3e-24 F-box associated beta propeller domain
FBA_3 PF08268 113 - 347 4.7e-19 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 120 - 268 4.1e-09 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 236, 412
AciI CCGC 1 cut(s) 989
AclWI GGATC 6 cut(s) 457, 594, 644, 977, 1154, 1167
AcoI YGGCCR 1 cut(s) 822
AcsI RAATTY 1 cut(s) 817
AcuI CTGAAG 1 cut(s) 272
AfaI GTAC 3 cut(s) 266, 302, 965
AfiI CCNNNNNNNGG 3 cut(s) 476, 659, 820
AgsI TTSAA 3 cut(s) 157, 320, 1085
AjnI CCWGG 2 cut(s) 475, 681
AluBI AGCT 3 cut(s) 120, 617, 735
AluI AGCT 3 cut(s) 120, 617, 735
Alw26I GTCTC 1 cut(s) 485
AlwI GGATC 6 cut(s) 457, 594, 644, 977, 1154, 1167
AlwNI CAGNNNCTG 1 cut(s) 332
Ama87I CYCGRG 2 cut(s) 115, 1118
AoxI GGCC 2 cut(s) 478, 822
ApeKI GCWGC 2 cut(s) 617, 771
ApoI RAATTY 1 cut(s) 817
AspA2I CCTAGG 1 cut(s) 581
AspLEI GCGC 1 cut(s) 238
AspS9I GGNCC 2 cut(s) 811, 954
AsuHPI GGTGA 4 cut(s) 167, 669, 934, 1040
AvaI CYCGRG 2 cut(s) 115, 1118
AvaII GGWCC 2 cut(s) 811, 954
AvrII CCTAGG 1 cut(s) 581
AxyI CCTNAGG 1 cut(s) 18
BalI TGGCCA 1 cut(s) 824
BamHI GGATCC 1 cut(s) 1159
BanII GRGCYC 1 cut(s) 703
BauI CACGAG 1 cut(s) 625
BbvCI CCTCAGC 1 cut(s) 137
BbvI GCAGC 2 cut(s) 604, 783
BccI CCATC 2 cut(s) 62, 854
BciT130I CCWGG 2 cut(s) 477, 683
BcoDI GTCTC 1 cut(s) 485
BfaI CTAG 4 cut(s) 582, 639, 1097, 1137
BfmI CTRYAG 1 cut(s) 618
BisI GCNGC 2 cut(s) 618, 772
BlnI CCTAGG 1 cut(s) 581
BlsI GCNGC 2 cut(s) 619, 773
BmcAI AGTACT 1 cut(s) 302
Bme1390I CCNGG 2 cut(s) 477, 683
Bme18I GGWCC 2 cut(s) 811, 954
BmeT110I CYCGRG 2 cut(s) 115, 1118
BmgT120I GGNCC 2 cut(s) 811, 954
BmiI GGNNCC 3 cut(s) 579, 813, 1161
BmrFI CCNGG 2 cut(s) 477, 683
BmrI ACTGGG 1 cut(s) 718
BmsI GCATC 3 cut(s) 523, 703, 1189
BmuI ACTGGG 1 cut(s) 718
BplI GAGNNNNNCTC 2 cut(s) 251, 283
BpmI CTGGAG 2 cut(s) 309, 876
Bpu10I CCTNAGC 1 cut(s) 137
BsaBI GATNNNNATC 1 cut(s) 319
BsaJI CCNNGG 6 cut(s) 78, 166, 190, 581, 681, 1155
BsaXI ACNNNNNCTCC 2 cut(s) 779, 809
Bsc4I CCNNNNNNNGG 3 cut(s) 476, 659, 820
Bse118I RCCGGY 1 cut(s) 1056
Bse1I ACTGG 5 cut(s) 326, 713, 759, 825, 1081
Bse21I CCTNAGG 1 cut(s) 18
Bse3DI GCAATG 1 cut(s) 836
Bse8I GATNNNNATC 1 cut(s) 319
BseBI CCWGG 2 cut(s) 477, 683
BseDI CCNNGG 6 cut(s) 78, 166, 190, 581, 681, 1155
BseGI GGATG 2 cut(s) 240, 718
BseJI GATNNNNATC 1 cut(s) 319
BseLI CCNNNNNNNGG 3 cut(s) 476, 659, 820
BseMI GCAATG 1 cut(s) 836
BseMII CTCAG 3 cut(s) 32, 151, 1015
BseNI ACTGG 5 cut(s) 326, 713, 759, 825, 1081
BseRI GAGGAG 1 cut(s) 587
BseXI GCAGC 2 cut(s) 604, 783
BsgI GTGCAG 1 cut(s) 962
Bsh1236I CGCG 2 cut(s) 236, 412
BshFI GGCC 2 cut(s) 480, 824
BsiHKCI CYCGRG 2 cut(s) 115, 1118
BsiSI CCGG 1 cut(s) 1057
BslI CCNNNNNNNGG 3 cut(s) 476, 659, 820
BsmAI GTCTC 1 cut(s) 485
BsnI GGCC 2 cut(s) 480, 824
BsoBI CYCGRG 2 cut(s) 115, 1118
Bsp1286I GDGCHC 1 cut(s) 703
Bsp1407I TGTACA 1 cut(s) 963
Bsp143I GATC 6 cut(s) 462, 586, 649, 982, 1159, 1203
Bsp19I CCATGG 2 cut(s) 166, 1155
BspACI CCGC 1 cut(s) 989
BspANI GGCC 2 cut(s) 480, 824
BspCNI CTCAG 3 cut(s) 31, 150, 1014
BspFNI CGCG 2 cut(s) 236, 412
BspHI TCATGA 1 cut(s) 429
BspLI GGNNCC 3 cut(s) 579, 813, 1161
BspMAI CTGCAG 1 cut(s) 622
BspPI GGATC 6 cut(s) 457, 594, 644, 977, 1154, 1167
BspQI GCTCTTC 1 cut(s) 708
BsrDI GCAATG 1 cut(s) 836
BsrFI RCCGGY 1 cut(s) 1056
BsrGI TGTACA 1 cut(s) 963
BsrI ACTGG 5 cut(s) 326, 713, 759, 825, 1081
BssAI RCCGGY 1 cut(s) 1056
BssECI CCNNGG 6 cut(s) 78, 166, 190, 581, 681, 1155
BssMI GATC 6 cut(s) 462, 586, 649, 982, 1159, 1203
BssSI CACGAG 1 cut(s) 625
BssT1I CCWWGG 3 cut(s) 166, 581, 1155
Bst2BI CACGAG 1 cut(s) 625
Bst2UI CCWGG 2 cut(s) 477, 683
Bst4CI ACNGT 4 cut(s) 215, 722, 968, 995
Bst6I CTCTTC 2 cut(s) 708, 1016
BstAPI GCANNNNNTGC 1 cut(s) 533
BstAUI TGTACA 1 cut(s) 963
BstC8I GCNNGC 1 cut(s) 622
BstDEI CTNAG 5 cut(s) 18, 44, 137, 482, 1001
BstDSI CCRYGG 3 cut(s) 166, 190, 1155
BstF5I GGATG 2 cut(s) 240, 718
BstFNI CGCG 2 cut(s) 236, 412
BstHHI GCGC 1 cut(s) 238
BstKTI GATC 6 cut(s) 465, 589, 652, 985, 1162, 1206
BstMAI GTCTC 1 cut(s) 485
BstMBI GATC 6 cut(s) 462, 586, 649, 982, 1159, 1203
BstMWI GCNNNNNNNGC 2 cut(s) 533, 741
BstNI CCWGG 2 cut(s) 477, 683
BstSCI CCNGG 2 cut(s) 475, 681
BstSFI CTRYAG 1 cut(s) 618
BstUI CGCG 2 cut(s) 236, 412
BstV1I GCAGC 2 cut(s) 604, 783
BstX2I RGATCY 2 cut(s) 982, 1159
BstYI RGATCY 2 cut(s) 982, 1159
Bsu36I CCTNAGG 1 cut(s) 18
BsuRI GGCC 2 cut(s) 480, 824
BtgI CCRYGG 3 cut(s) 166, 190, 1155
BtsCI GGATG 2 cut(s) 240, 718
BtsIMutI CAGTG 2 cut(s) 465, 706
Cac8I GCNNGC 1 cut(s) 622
CaiI CAGNNNCTG 1 cut(s) 332
CciI TCATGA 1 cut(s) 429
CfoI GCGC 1 cut(s) 238
Cfr10I RCCGGY 1 cut(s) 1056
Cfr13I GGNCC 2 cut(s) 811, 954
Csp6I GTAC 3 cut(s) 265, 301, 964
CviAII CATG 7 cut(s) 93, 167, 287, 430, 518, 1156, 1169
CviQI GTAC 3 cut(s) 265, 301, 964
DdeI CTNAG 5 cut(s) 18, 44, 137, 482, 1001
DpnI GATC 6 cut(s) 464, 588, 651, 984, 1161, 1205
DpnII GATC 6 cut(s) 462, 586, 649, 982, 1159, 1203
EaeI YGGCCR 1 cut(s) 822
Eam1104I CTCTTC 2 cut(s) 708, 1016
EarI CTCTTC 2 cut(s) 708, 1016
Eco130I CCWWGG 3 cut(s) 166, 581, 1155
Eco24I GRGCYC 1 cut(s) 703
Eco32I GATATC 1 cut(s) 1142
Eco47I GGWCC 2 cut(s) 811, 954
Eco57I CTGAAG 1 cut(s) 272
Eco81I CCTNAGG 1 cut(s) 18
Eco88I CYCGRG 2 cut(s) 115, 1118
EcoRII CCWGG 2 cut(s) 475, 681
EcoRV GATATC 1 cut(s) 1142
EcoT14I CCWWGG 3 cut(s) 166, 581, 1155
EcoT38I GRGCYC 1 cut(s) 703
ErhI CCWWGG 3 cut(s) 166, 581, 1155
FaeI CATG 7 cut(s) 96, 170, 290, 433, 521, 1159, 1172
FalI AAGNNNNNCTT 2 cut(s) 889, 921
FatI CATG 7 cut(s) 92, 166, 286, 429, 517, 1155, 1168
FauNDI CATATG 1 cut(s) 71
Fnu4HI GCNGC 2 cut(s) 618, 772
FokI GGATG 2 cut(s) 227, 725
FriOI GRGCYC 1 cut(s) 703
Fsp4HI GCNGC 2 cut(s) 618, 772
FspBI CTAG 4 cut(s) 582, 639, 1097, 1137
GlaI GCGC 1 cut(s) 237
GluI GCNGC 2 cut(s) 618, 772
GsuI CTGGAG 2 cut(s) 309, 876
HaeIII GGCC 2 cut(s) 480, 824
HapII CCGG 1 cut(s) 1057
HhaI GCGC 1 cut(s) 238
Hin1II CATG 7 cut(s) 96, 170, 290, 433, 521, 1159, 1172
Hin6I GCGC 1 cut(s) 236
HinP1I GCGC 1 cut(s) 236
HinfI GANTC 5 cut(s) 147, 439, 635, 890, 947
HpaII CCGG 1 cut(s) 1057
HphI GGTGA 4 cut(s) 167, 669, 934, 1040
Hpy166II GTNNAC 4 cut(s) 265, 954, 998, 1112
Hpy188I TCNGA 3 cut(s) 7, 252, 1004
Hpy188III TCNNGA 7 cut(s) 20, 430, 785, 855, 883, 911, 1137
Hpy8I GTNNAC 4 cut(s) 265, 954, 998, 1112
Hpy99I CGWCG 1 cut(s) 1056
HpyAV CCTTC 1 cut(s) 476
HpyCH4III ACNGT 4 cut(s) 215, 722, 968, 995
HpyCH4V TGCA 9 cut(s) 75, 87, 274, 306, 398, 620, 716, 841, 943
HpyF10VI GCNNNNNNNGC 2 cut(s) 533, 741
HpyF3I CTNAG 5 cut(s) 18, 44, 137, 482, 1001
Hsp92II CATG 7 cut(s) 96, 170, 290, 433, 521, 1159, 1172
HspAI GCGC 1 cut(s) 236
Kzo9I GATC 6 cut(s) 462, 586, 649, 982, 1159, 1203
LguI GCTCTTC 1 cut(s) 708
Lsp1109I GCAGC 2 cut(s) 604, 783
LweI GCATC 3 cut(s) 523, 703, 1189
MaeI CTAG 4 cut(s) 582, 639, 1097, 1137
MaeIII GTNAC 3 cut(s) 215, 419, 632
MalI GATC 6 cut(s) 464, 588, 651, 984, 1161, 1205
MboI GATC 6 cut(s) 462, 586, 649, 982, 1159, 1203
MboII GAAGA 4 cut(s) 5, 265, 695, 1033
MfeI CAATTG 1 cut(s) 842
MflI RGATCY 2 cut(s) 982, 1159
MhlI GDGCHC 1 cut(s) 703
MlsI TGGCCA 1 cut(s) 824
MluCI AATT 6 cut(s) 208, 817, 842, 959, 1080, 1085
MluNI TGGCCA 1 cut(s) 824
MlyI GAGTC 2 cut(s) 629, 956
MmeI TCCRAC 1 cut(s) 1020
Mox20I TGGCCA 1 cut(s) 824
MscI TGGCCA 1 cut(s) 824
MseI TTAA 1 cut(s) 693
MslI CAYNNNNRTG 1 cut(s) 711
Msp20I TGGCCA 1 cut(s) 824
MspA1I CMGCKG 1 cut(s) 989
MspI CCGG 1 cut(s) 1057
MspR9I CCNGG 2 cut(s) 477, 683
MunI CAATTG 1 cut(s) 842
MvaI CCWGG 2 cut(s) 477, 683
MvnI CGCG 2 cut(s) 236, 412
MwoI GCNNNNNNNGC 2 cut(s) 533, 741
NcoI CCATGG 2 cut(s) 166, 1155
NdeI CATATG 1 cut(s) 71
NdeII GATC 6 cut(s) 462, 586, 649, 982, 1159, 1203
NlaIII CATG 7 cut(s) 96, 170, 290, 433, 521, 1159, 1172
NlaIV GGNNCC 3 cut(s) 579, 813, 1161
NmuCI GTSAC 1 cut(s) 632
PaeR7I CTCGAG 2 cut(s) 115, 1118
PagI TCATGA 1 cut(s) 429
PciSI GCTCTTC 1 cut(s) 708
PfeI GAWTC 3 cut(s) 147, 439, 890
PkrI GCNGC 2 cut(s) 619, 773
PleI GAGTC 2 cut(s) 629, 955
PpsI GAGTC 2 cut(s) 629, 955
Psp6I CCWGG 2 cut(s) 475, 681
PspGI CCWGG 2 cut(s) 475, 681
PspN4I GGNNCC 3 cut(s) 579, 813, 1161
PspPI GGNCC 2 cut(s) 811, 954
PspXI VCTCGAGB 2 cut(s) 115, 1118
PstI CTGCAG 1 cut(s) 622
PstNI CAGNNNCTG 1 cut(s) 332
PsuI RGATCY 2 cut(s) 982, 1159
RsaI GTAC 3 cut(s) 266, 302, 965
RsaNI GTAC 3 cut(s) 265, 301, 964
RseI CAYNNNNRTG 1 cut(s) 711
SapI GCTCTTC 1 cut(s) 708
SaqAI TTAA 1 cut(s) 693
SatI GCNGC 2 cut(s) 618, 772
Sau3AI GATC 6 cut(s) 462, 586, 649, 982, 1159, 1203
Sau96I GGNCC 2 cut(s) 811, 954
ScaI AGTACT 1 cut(s) 302
SchI GAGTC 2 cut(s) 629, 956
ScrFI CCNGG 2 cut(s) 477, 683
SduI GDGCHC 1 cut(s) 703
SfaNI GCATC 3 cut(s) 523, 703, 1189
SfcI CTRYAG 1 cut(s) 618
Sfr274I CTCGAG 2 cut(s) 115, 1118
SinI GGWCC 2 cut(s) 811, 954
SlaI CTCGAG 2 cut(s) 115, 1118
SmiMI CAYNNNNRTG 1 cut(s) 711
SmlI CTYRAG 2 cut(s) 115, 1118
SmoI CTYRAG 2 cut(s) 115, 1118
Sse9I AATT 6 cut(s) 208, 817, 842, 959, 1080, 1085
SsiI CCGC 1 cut(s) 989
SspMI CTAG 4 cut(s) 582, 639, 1097, 1137
StyD4I CCNGG 2 cut(s) 475, 681
StyI CCWWGG 3 cut(s) 166, 581, 1155
TaaI ACNGT 4 cut(s) 215, 722, 968, 995
TaqI TCGA 3 cut(s) 116, 570, 1119
TaqII GACCGA 1 cut(s) 70
TasI AATT 6 cut(s) 208, 817, 842, 959, 1080, 1085
TatI WGTACW 3 cut(s) 264, 300, 963
TfiI GAWTC 3 cut(s) 147, 439, 890
Tru1I TTAA 1 cut(s) 693
Tru9I TTAA 1 cut(s) 693
TscAI CASTG 2 cut(s) 465, 713
TseFI GTSAC 1 cut(s) 632
TseI GCWGC 2 cut(s) 617, 771
Tsp45I GTSAC 1 cut(s) 632
TspDTI ATGAA 3 cut(s) 418, 600, 941
TspGWI ACGGA 2 cut(s) 350, 432
TspRI CASTG 2 cut(s) 465, 713
VpaK11BI GGWCC 2 cut(s) 811, 954
XapI RAATTY 1 cut(s) 817
XbaI TCTAGA 1 cut(s) 1136
XcmI CCANNNNNNNNNTGG 1 cut(s) 61
XhoI CTCGAG 2 cut(s) 115, 1118
XmaJI CCTAGG 1 cut(s) 581
XspI CTAG 4 cut(s) 582, 639, 1097, 1137
ZrmI AGTACT 1 cut(s) 302
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.