Rorug05G0438500

F-box domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000068
Physical Location & Seq
Reverse (-)
60984846 .. 60985654
809 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0438500.1

Sequence Viewer

Length: 720 bp
ATGGAACCACGAACTCTGCAACTGATGGAGCTACAAACCCAGCAACAAATCGAGGATGGAGGAAACAACCAAGCAGCCGGGAGTAGTGCCAACACAGATTTCTGGCGAAGCCGTGCCAGGTGGGTTCCTACTCCAGATCAAATAAGGATCCTCAAGGATCTTTACTACGACAAGGGAGTTAAGCGCCCAACTACAGAGCATATTCACGAGATCTGTCTCCAGCTGAACCAGTATGGACATGTTGAGGGCAAGAACATTTATTTTTGGTTCCAGAATGTCAGGGCTCGAGAGAAGCAGATGAAGAGGTGCAATCAGGCTGCTCAAGTGCCCATGGGAACTAGTTCTCCTGGTACTGGTGGATCCATTGATCTCAATTTTGGGCCAGCTGGTTCTACTGGTGCTGGTGGATCCATCGACATCAATTTTGGGCCAGCTGGTGGATCCATTGACATCAATTTTGGGTCCACTAGTTCTACTGATGATGGTAGATCCATTAATCTCAACTTTGGTTCCACCGATTCTACTGGAGGACAAACATCCCTGCAACAACGAGGAGGAGATCACCAGGAGATTGAAACCCTTCCACTATTCCCCATGCATGGTGAGGACATCTTGGGCATCATGAAGACTACTTCCGAGGGAGGTAGCGGTTATGGCGGTGGCTCTCACATTTCCCTTGAGCTCAGCCTCAACTCCTACAGAGATGCAGACATGGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

239

Amino Acids

25.85

Weight (kDa)

5.19

Isoelectric Point (pI)

52.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Homeodomain PF00046 38 - 99 1.1e-09 Homeodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 437
AciI CCGC 2 cut(s) 648, 657
AfaI GTAC 1 cut(s) 352
AfiI CCNNNNNNNGG 3 cut(s) 353, 437, 599
AflIII ACRYGT 1 cut(s) 238
AgsI TTSAA 1 cut(s) 575
AhlI ACTAGT 2 cut(s) 338, 467
AjnI CCWGG 3 cut(s) 116, 346, 564
AjuI GAANNNNNNNTTGG 2 cut(s) 83, 115
AloI GAACNNNNNNTCC 2 cut(s) 328, 360
AluBI AGCT 5 cut(s) 31, 223, 386, 434, 682
AluI AGCT 5 cut(s) 31, 223, 386, 434, 682
Alw21I GWGCWC 1 cut(s) 684
Alw26I GTCTC 1 cut(s) 221
Ama87I CYCGRG 1 cut(s) 285
AoxI GGCC 2 cut(s) 380, 428
ApeKI GCWGC 2 cut(s) 74, 317
ArsI GACNNNNNNTTYG 4 cut(s) 407, 439, 440, 472
AseI ATTAAT 1 cut(s) 495
Asp700I GAANNNNTTC 2 cut(s) 340, 579
AspLEI GCGC 1 cut(s) 186
AspS9I GGNCC 3 cut(s) 380, 428, 462
AsuC2I CCSGG 1 cut(s) 79
AsuHPI GGTGA 2 cut(s) 554, 614
AvaI CYCGRG 1 cut(s) 285
AvaII GGWCC 1 cut(s) 462
BaeGI GKGCMC 1 cut(s) 330
BamHI GGATCC 4 cut(s) 147, 359, 407, 440
BanII GRGCYC 2 cut(s) 286, 684
BauI CACGAG 1 cut(s) 206
BbsI GAAGAC 1 cut(s) 632
Bbv12I GWGCWC 1 cut(s) 684
BbvI GCAGC 2 cut(s) 86, 304
BccI CCATC 4 cut(s) 19, 50, 419, 476
BceAI ACGGC 1 cut(s) 96
BciT130I CCWGG 3 cut(s) 118, 348, 566
BcnI CCSGG 1 cut(s) 79
BcoDI GTCTC 1 cut(s) 221
BcuI ACTAGT 2 cut(s) 338, 467
BfaI CTAG 2 cut(s) 339, 468
BfmI CTRYAG 2 cut(s) 192, 697
BfoI RGCGCY 1 cut(s) 187
BglII AGATCT 1 cut(s) 210
BisI GCNGC 2 cut(s) 75, 318
BlpI GCTNAGC 1 cut(s) 683
BlsI GCNGC 2 cut(s) 76, 319
Bme1390I CCNGG 4 cut(s) 79, 118, 348, 566
Bme18I GGWCC 1 cut(s) 462
BmeT110I CYCGRG 1 cut(s) 285
BmgT120I GGNCC 3 cut(s) 380, 428, 462
BmiI GGNNCC 9 cut(s) 6, 126, 149, 269, 361, 409, 442, 463, 511
BmrFI CCNGG 4 cut(s) 79, 118, 348, 566
BmsI GCATC 2 cut(s) 627, 694
BpiI GAAGAC 1 cut(s) 632
BpmI CTGGAG 3 cut(s) 117, 203, 546
Bpu1102I GCTNAGC 1 cut(s) 683
BpuEI CTTGAG 3 cut(s) 137, 306, 698
BpuMI CCSGG 1 cut(s) 79
BsaJI CCNNGG 2 cut(s) 330, 636
BsaXI ACNNNNNCTCC 2 cut(s) 328, 358
Bsc4I CCNNNNNNNGG 3 cut(s) 353, 437, 599
Bse1I ACTGG 4 cut(s) 229, 358, 400, 529
BseBI CCWGG 3 cut(s) 118, 348, 566
BseDI CCNNGG 2 cut(s) 330, 636
BseGI GGATG 2 cut(s) 61, 536
BseLI CCNNNNNNNGG 3 cut(s) 353, 437, 599
BseMII CTCAG 1 cut(s) 697
BseNI ACTGG 4 cut(s) 229, 358, 400, 529
BseRI GAGGAG 2 cut(s) 567, 570
BseSI GKGCMC 1 cut(s) 330
BseXI GCAGC 2 cut(s) 86, 304
BseYI CCCAGC 1 cut(s) 39
BshFI GGCC 2 cut(s) 382, 430
BsiHKAI GWGCWC 1 cut(s) 684
BsiHKCI CYCGRG 1 cut(s) 285
BsiSI CCGG 1 cut(s) 78
BslI CCNNNNNNNGG 3 cut(s) 353, 437, 599
BsmAI GTCTC 1 cut(s) 221
BsnI GGCC 2 cut(s) 382, 430
BsoBI CYCGRG 1 cut(s) 285
Bsp1286I GDGCHC 3 cut(s) 286, 330, 684
Bsp1720I GCTNAGC 1 cut(s) 683
Bsp19I CCATGG 1 cut(s) 330
BspACI CCGC 2 cut(s) 648, 657
BspANI GGCC 2 cut(s) 382, 430
BspCNI CTCAG 1 cut(s) 696
BspHI TCATGA 1 cut(s) 621
BspLI GGNNCC 9 cut(s) 6, 126, 149, 269, 361, 409, 442, 463, 511
BsrI ACTGG 4 cut(s) 229, 358, 400, 529
BssECI CCNNGG 2 cut(s) 330, 636
BssSI CACGAG 1 cut(s) 206
BssT1I CCWWGG 1 cut(s) 330
Bst2BI CACGAG 1 cut(s) 206
Bst2UI CCWGG 3 cut(s) 118, 348, 566
Bst6I CTCTTC 1 cut(s) 296
BstC8I GCNNGC 2 cut(s) 384, 432
BstDEI CTNAG 2 cut(s) 683, 717
BstDSI CCRYGG 1 cut(s) 330
BstF5I GGATG 2 cut(s) 61, 536
BstH2I RGCGCY 1 cut(s) 187
BstHHI GCGC 1 cut(s) 186
BstMAI GTCTC 1 cut(s) 221
BstMWI GCNNNNNNNGC 2 cut(s) 654, 713
BstNI CCWGG 3 cut(s) 118, 348, 566
BstNSI RCATGY 1 cut(s) 242
BstSCI CCNGG 4 cut(s) 77, 116, 346, 564
BstSFI CTRYAG 2 cut(s) 192, 697
BstSLI GKGCMC 1 cut(s) 330
BstV1I GCAGC 2 cut(s) 86, 304
BstV2I GAAGAC 1 cut(s) 632
BstX2I RGATCY 7 cut(s) 147, 157, 210, 359, 407, 440, 488
BstYI RGATCY 7 cut(s) 147, 157, 210, 359, 407, 440, 488
BsuRI GGCC 2 cut(s) 382, 430
BtgI CCRYGG 1 cut(s) 330
BtsCI GGATG 2 cut(s) 61, 536
Cac8I GCNNGC 2 cut(s) 384, 432
CciI TCATGA 1 cut(s) 621
CfoI GCGC 1 cut(s) 186
Cfr13I GGNCC 3 cut(s) 380, 428, 462
Csp6I GTAC 1 cut(s) 351
CviAII CATG 6 cut(s) 239, 331, 595, 599, 622, 712
CviQI GTAC 1 cut(s) 351
DdeI CTNAG 2 cut(s) 683, 717
Eam1104I CTCTTC 1 cut(s) 296
EarI CTCTTC 1 cut(s) 296
Ecl136II GAGCTC 1 cut(s) 682
Eco130I CCWWGG 1 cut(s) 330
Eco24I GRGCYC 2 cut(s) 286, 684
Eco47I GGWCC 1 cut(s) 462
Eco53kI GAGCTC 1 cut(s) 682
Eco88I CYCGRG 1 cut(s) 285
EcoICRI GAGCTC 1 cut(s) 682
EcoRII CCWGG 3 cut(s) 116, 346, 564
EcoT14I CCWWGG 1 cut(s) 330
EcoT22I ATGCAT 1 cut(s) 600
EcoT38I GRGCYC 2 cut(s) 286, 684
ErhI CCWWGG 1 cut(s) 330
FaeI CATG 6 cut(s) 242, 334, 598, 602, 625, 715
FaiI YATR 9 cut(s) 201, 234, 240, 332, 596, 600, 623, 654, 713
FatI CATG 6 cut(s) 238, 330, 594, 598, 621, 711
Fnu4HI GCNGC 2 cut(s) 75, 318
FokI GGATG 2 cut(s) 68, 523
FriOI GRGCYC 2 cut(s) 286, 684
Fsp4HI GCNGC 2 cut(s) 75, 318
FspBI CTAG 2 cut(s) 339, 468
GlaI GCGC 1 cut(s) 185
GluI GCNGC 2 cut(s) 75, 318
GsaI CCCAGC 1 cut(s) 43
GsuI CTGGAG 3 cut(s) 117, 203, 546
HaeII RGCGCY 1 cut(s) 187
HaeIII GGCC 2 cut(s) 382, 430
HapII CCGG 1 cut(s) 78
HhaI GCGC 1 cut(s) 186
Hin1II CATG 6 cut(s) 242, 334, 598, 602, 625, 715
Hin6I GCGC 1 cut(s) 184
HinP1I GCGC 1 cut(s) 184
HinfI GANTC 1 cut(s) 518
HpaII CCGG 1 cut(s) 78
HphI GGTGA 2 cut(s) 554, 614
Hpy166II GTNNAC 1 cut(s) 465
Hpy188I TCNGA 1 cut(s) 637
Hpy188III TCNNGA 5 cut(s) 134, 206, 271, 287, 622
Hpy8I GTNNAC 1 cut(s) 465
HpyAV CCTTC 1 cut(s) 590
HpyCH4V TGCA 5 cut(s) 19, 309, 544, 598, 707
HpyF10VI GCNNNNNNNGC 2 cut(s) 654, 713
HpyF3I CTNAG 2 cut(s) 683, 717
Hsp92II CATG 6 cut(s) 242, 334, 598, 602, 625, 715
HspAI GCGC 1 cut(s) 184
LmnI GCTCC 1 cut(s) 28
Lsp1109I GCAGC 2 cut(s) 86, 304
LweI GCATC 2 cut(s) 627, 694
MaeI CTAG 2 cut(s) 339, 468
MboII GAAGA 2 cut(s) 313, 637
MflI RGATCY 7 cut(s) 147, 157, 210, 359, 407, 440, 488
MhlI GDGCHC 3 cut(s) 286, 330, 684
MluCI AATT 3 cut(s) 373, 421, 454
Mph1103I ATGCAT 1 cut(s) 600
MroXI GAANNNNTTC 2 cut(s) 340, 579
MseI TTAA 2 cut(s) 180, 495
MspA1I CMGCKG 3 cut(s) 223, 386, 434
MspI CCGG 1 cut(s) 78
MspR9I CCNGG 4 cut(s) 79, 118, 348, 566
MvaI CCWGG 3 cut(s) 118, 348, 566
MwoI GCNNNNNNNGC 2 cut(s) 654, 713
NciI CCSGG 1 cut(s) 79
NcoI CCATGG 1 cut(s) 330
NlaIII CATG 6 cut(s) 242, 334, 598, 602, 625, 715
NlaIV GGNNCC 9 cut(s) 6, 126, 149, 269, 361, 409, 442, 463, 511
NsiI ATGCAT 1 cut(s) 600
NspI RCATGY 1 cut(s) 242
PaeR7I CTCGAG 1 cut(s) 285
PagI TCATGA 1 cut(s) 621
PciI ACATGT 1 cut(s) 238
PdmI GAANNNNTTC 2 cut(s) 340, 579
PfeI GAWTC 1 cut(s) 518
PflMI CCANNNNNTGG 1 cut(s) 437
PkrI GCNGC 2 cut(s) 76, 319
PscI ACATGT 1 cut(s) 238
PshBI ATTAAT 1 cut(s) 495
Psp124BI GAGCTC 1 cut(s) 684
Psp6I CCWGG 3 cut(s) 116, 346, 564
PspFI CCCAGC 1 cut(s) 39
PspGI CCWGG 3 cut(s) 116, 346, 564
PspN4I GGNNCC 9 cut(s) 6, 126, 149, 269, 361, 409, 442, 463, 511
PspPI GGNCC 3 cut(s) 380, 428, 462
PsuI RGATCY 7 cut(s) 147, 157, 210, 359, 407, 440, 488
PvuII CAGCTG 3 cut(s) 223, 386, 434
RsaI GTAC 1 cut(s) 352
RsaNI GTAC 1 cut(s) 351
SacI GAGCTC 1 cut(s) 684
SaqAI TTAA 2 cut(s) 180, 495
SatI GCNGC 2 cut(s) 75, 318
Sau96I GGNCC 3 cut(s) 380, 428, 462
ScrFI CCNGG 4 cut(s) 79, 118, 348, 566
SduI GDGCHC 3 cut(s) 286, 330, 684
SetI ASST 8 cut(s) 33, 122, 225, 308, 388, 436, 646, 684
SfaNI GCATC 2 cut(s) 627, 694
SfcI CTRYAG 2 cut(s) 192, 697
Sfr274I CTCGAG 1 cut(s) 285
SinI GGWCC 1 cut(s) 462
SlaI CTCGAG 1 cut(s) 285
SmlI CTYRAG 4 cut(s) 152, 285, 321, 677
SmoI CTYRAG 4 cut(s) 152, 285, 321, 677
SpeI ACTAGT 2 cut(s) 338, 467
Sse9I AATT 3 cut(s) 373, 421, 454
SsiI CCGC 2 cut(s) 648, 657
SspMI CTAG 2 cut(s) 339, 468
SstI GAGCTC 1 cut(s) 684
StyD4I CCNGG 4 cut(s) 77, 116, 346, 564
StyI CCWWGG 1 cut(s) 330
TaqI TCGA 3 cut(s) 51, 286, 414
TasI AATT 3 cut(s) 373, 421, 454
TfiI GAWTC 1 cut(s) 518
Tru1I TTAA 2 cut(s) 180, 495
Tru9I TTAA 2 cut(s) 180, 495
TseI GCWGC 2 cut(s) 74, 317
TspDTI ATGAA 2 cut(s) 314, 638
Van91I CCANNNNNTGG 1 cut(s) 437
VpaK11BI GGWCC 1 cut(s) 462
VspI ATTAAT 1 cut(s) 495
XceI RCATGY 1 cut(s) 242
XhoI CTCGAG 1 cut(s) 285
XmnI GAANNNNTTC 2 cut(s) 340, 579
XspI CTAG 2 cut(s) 339, 468
Zsp2I ATGCAT 1 cut(s) 600
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.