Rroxscaffold_1G00051570

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000068
Physical Location & Seq
Forward (+)
72209815 .. 72211104
1290 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00051570.1

Sequence Viewer

Length: 1008 bp
ATGTGGGAGGATTCATGTGAAGAAGGTAAGACCCTCTTGACCCCTGCCTCCATCTCTAAGCTTTCTTTGGCAATCACTGATTTGTTCAAAGATTTTCCTGAGGAACTCATACCTGAAGTCCTAATCAGACTACCCATCAATTCTGTGGTCAAATGTACCTCAGTCTGCAAGTCATGGAGTGATGATGATTGCTGGTTTTTAAGAGAAACCCCCATCCAAGGGTTTAAACAGGACCTTTACTCTTTGCATTATGAAAACCCTGCTTTTGGGGAGTATTGCAAGATTGAATTTCCAACTGGGCTCAAGGAAATATTGGAGAATCCGTGTTTTCGTGTTGTGGGTACTTGTAATGGGTTGGTTTGCCTTGCTGATGATGCGGTGTCTTATTCTTATAACTTTGTTATATGGAACCCTTCTGTGAGAAAGTATGTGACCCTTCCTAAGCCCCTTATTAAGCTTTCTACTCATGGTGACTATGATGCTTCTATTGGTCTTGGTTATGATGCTGTGACCAATGACTATAAGGTGTATTCACTGGCCAAGAAGTGTTGGGGTGGGCTTTGTTCTGATCCTCCTCCATGTCAAATGAATGGCTGCTCGTCCGAGGCTTTTGTTAATGAAACACTTCACTGGTTGGCTTTCCGTCTCACCGGTGGTGATTATATCTACTTCGTTTTGACATTTGATGTGAGCACTGAGTCAATTCAAGAGATATTGTTGCCAAAGAACTTCATATTGGATCTGTCATTGGCCTTGCGATTGTCTCTTTCCGGAGACCAAAAATCCATTGCTCTGTTTGTAAGGTGCAAGAGTGATACGGATTGTTTTCTTGATATATGGAGTGGAGAAGTGGTGTTGGTCCTTGAAGATAGCTGTGAATTAGTTTCAGCTAACCTGGTGAGCAAACAGTTTAAAAGTCTTGGGAGTTCTCAAGGTCAGCTGTGGTCTGTTGACCCTTATGAAGAGAGCCTTGTCTTGATTGACAGGAAGGATGCAACTTCTTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

335

Amino Acids

37.57

Weight (kDa)

4.56

Isoelectric Point (pI)

32.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_3 PF08268 109 - 181 3e-09 F-box associated beta propeller domain
FBA_1 PF07734 110 - 280 6.9e-11 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 393
AccIII TCCGGA 1 cut(s) 770
AciI CCGC 1 cut(s) 377
AclWI GGATC 2 cut(s) 563, 747
AcoI YGGCCR 1 cut(s) 537
AcsI RAATTY 1 cut(s) 287
AcuI CTGAAG 1 cut(s) 135
AfaI GTAC 2 cut(s) 157, 343
AfiI CCNNNNNNNGG 3 cut(s) 218, 219, 266
AgeI ACCGGT 1 cut(s) 650
AgsI TTSAA 4 cut(s) 88, 287, 707, 866
AjnI CCWGG 1 cut(s) 894
AjuI GAANNNNNNNTTGG 2 cut(s) 719, 751
AluBI AGCT 5 cut(s) 61, 457, 873, 890, 940
AluI AGCT 5 cut(s) 61, 457, 873, 890, 940
Alw21I GWGCWC 1 cut(s) 695
Alw26I GTCTC 3 cut(s) 650, 768, 768
AlwI GGATC 2 cut(s) 563, 747
Aor13HI TCCGGA 1 cut(s) 770
AoxI GGCC 2 cut(s) 537, 750
ApeKI GCWGC 1 cut(s) 594
ApoI RAATTY 1 cut(s) 287
AsiGI ACCGGT 1 cut(s) 650
Asp700I GAANNNNTTC 1 cut(s) 624
AspS9I GGNCC 2 cut(s) 232, 859
AsuHPI GGTGA 4 cut(s) 482, 640, 668, 910
AvaII GGWCC 2 cut(s) 232, 859
AxyI CCTNAGG 1 cut(s) 99
BalI TGGCCA 1 cut(s) 539
BanII GRGCYC 1 cut(s) 303
Bbv12I GWGCWC 1 cut(s) 695
BbvI GCAGC 1 cut(s) 581
BccI CCATC 3 cut(s) 59, 143, 221
BciT130I CCWGG 1 cut(s) 896
BcoDI GTCTC 3 cut(s) 650, 768, 768
BisI GCNGC 1 cut(s) 595
BlsI GCNGC 1 cut(s) 596
Bme1390I CCNGG 1 cut(s) 896
Bme18I GGWCC 2 cut(s) 232, 859
BmgT120I GGNCC 2 cut(s) 232, 859
BmiI GGNNCC 1 cut(s) 410
BmrFI CCNGG 1 cut(s) 896
BmrI ACTGGG 1 cut(s) 306
BmsI GCATC 4 cut(s) 364, 469, 493, 982
BmuI ACTGGG 1 cut(s) 306
Bpu10I CCTNAGC 1 cut(s) 441
BpuEI CTTGAG 2 cut(s) 287, 915
BsaI GGTCTC 1 cut(s) 768
BsaJI CCNNGG 2 cut(s) 217, 603
BsaWI WCCGGW 2 cut(s) 650, 770
BsaXI ACNNNNNCTCC 4 cut(s) 308, 338, 837, 867
Bsc4I CCNNNNNNNGG 3 cut(s) 218, 219, 266
Bse118I RCCGGY 1 cut(s) 650
Bse1I ACTGG 3 cut(s) 301, 540, 635
Bse21I CCTNAGG 1 cut(s) 99
Bse3DI GCAATG 1 cut(s) 786
BseAI TCCGGA 1 cut(s) 770
BseBI CCWGG 1 cut(s) 896
BseDI CCNNGG 2 cut(s) 217, 603
BseGI GGATG 2 cut(s) 213, 997
BseLI CCNNNNNNNGG 3 cut(s) 218, 219, 266
BseMI GCAATG 1 cut(s) 786
BseMII CTCAG 3 cut(s) 90, 174, 687
BseNI ACTGG 3 cut(s) 301, 540, 635
BseRI GAGGAG 1 cut(s) 564
BseXI GCAGC 1 cut(s) 581
BshFI GGCC 2 cut(s) 539, 752
BshTI ACCGGT 1 cut(s) 650
BsiHKAI GWGCWC 1 cut(s) 695
BsiSI CCGG 2 cut(s) 651, 771
BslI CCNNNNNNNGG 3 cut(s) 218, 219, 266
BsmAI GTCTC 3 cut(s) 650, 768, 768
BsmBI CGTCTC 1 cut(s) 650
BsnI GGCC 2 cut(s) 539, 752
Bso31I GGTCTC 1 cut(s) 768
Bsp1286I GDGCHC 2 cut(s) 303, 695
Bsp13I TCCGGA 1 cut(s) 770
Bsp143I GATC 2 cut(s) 568, 739
BspACI CCGC 1 cut(s) 377
BspANI GGCC 2 cut(s) 539, 752
BspCNI CTCAG 3 cut(s) 91, 173, 688
BspEI TCCGGA 1 cut(s) 770
BspLI GGNNCC 1 cut(s) 410
BspPI GGATC 2 cut(s) 563, 747
BspTNI GGTCTC 1 cut(s) 768
BsrDI GCAATG 1 cut(s) 786
BsrFI RCCGGY 1 cut(s) 650
BsrI ACTGG 3 cut(s) 301, 540, 635
BssAI RCCGGY 1 cut(s) 650
BssECI CCNNGG 2 cut(s) 217, 603
BssMI GATC 2 cut(s) 568, 739
BssT1I CCWWGG 1 cut(s) 217
Bst2UI CCWGG 1 cut(s) 896
Bst4CI ACNGT 1 cut(s) 909
Bst6I CTCTTC 1 cut(s) 957
BstDEI CTNAG 5 cut(s) 57, 99, 160, 441, 696
BstF5I GGATG 2 cut(s) 213, 997
BstKTI GATC 2 cut(s) 571, 742
BstMAI GTCTC 3 cut(s) 650, 768, 768
BstMBI GATC 2 cut(s) 568, 739
BstMWI GCNNNNNNNGC 1 cut(s) 374
BstNI CCWGG 1 cut(s) 896
BstSCI CCNGG 1 cut(s) 894
BstV1I GCAGC 1 cut(s) 581
BstX2I RGATCY 1 cut(s) 739
BstYI RGATCY 1 cut(s) 739
Bsu36I CCTNAGG 1 cut(s) 99
BsuRI GGCC 2 cut(s) 539, 752
BtsCI GGATG 2 cut(s) 213, 997
BtsIMutI CAGTG 4 cut(s) 75, 533, 628, 693
Cfr10I RCCGGY 1 cut(s) 650
Cfr13I GGNCC 2 cut(s) 232, 859
CsiI ACCWGGT 1 cut(s) 894
Csp6I GTAC 2 cut(s) 156, 342
CspAI ACCGGT 1 cut(s) 650
CviAII CATG 4 cut(s) 15, 174, 467, 579
CviQI GTAC 2 cut(s) 156, 342
DdeI CTNAG 5 cut(s) 57, 99, 160, 441, 696
DpnI GATC 2 cut(s) 570, 741
DpnII GATC 2 cut(s) 568, 739
DraI TTTAAA 2 cut(s) 226, 913
EaeI YGGCCR 1 cut(s) 537
Eam1104I CTCTTC 1 cut(s) 957
EarI CTCTTC 1 cut(s) 957
Eco130I CCWWGG 1 cut(s) 217
Eco24I GRGCYC 1 cut(s) 303
Eco31I GGTCTC 1 cut(s) 768
Eco47I GGWCC 2 cut(s) 232, 859
Eco57I CTGAAG 1 cut(s) 135
Eco81I CCTNAGG 1 cut(s) 99
EcoO109I RGGNCCY 1 cut(s) 232
EcoRII CCWGG 1 cut(s) 894
EcoT14I CCWWGG 1 cut(s) 217
EcoT38I GRGCYC 1 cut(s) 303
ErhI CCWWGG 1 cut(s) 217
Esp3I CGTCTC 1 cut(s) 650
FaeI CATG 4 cut(s) 18, 177, 470, 582
FalI AAGNNNNNCTT 4 cut(s) 20, 52, 954, 986
FatI CATG 4 cut(s) 14, 173, 466, 578
Fnu4HI GCNGC 1 cut(s) 595
FokI GGATG 2 cut(s) 200, 1004
FriOI GRGCYC 1 cut(s) 303
Fsp4HI GCNGC 1 cut(s) 595
GluI GCNGC 1 cut(s) 595
HaeIII GGCC 2 cut(s) 539, 752
HapII CCGG 2 cut(s) 651, 771
Hin1II CATG 4 cut(s) 18, 177, 470, 582
HincII GTYRAC 1 cut(s) 952
HindII GTYRAC 1 cut(s) 952
HindIII AAGCTT 2 cut(s) 59, 455
HinfI GANTC 3 cut(s) 11, 319, 698
HpaII CCGG 2 cut(s) 651, 771
HphI GGTGA 4 cut(s) 482, 640, 668, 910
Hpy166II GTNNAC 1 cut(s) 952
Hpy188I TCNGA 3 cut(s) 128, 568, 604
Hpy188III TCNNGA 6 cut(s) 37, 98, 707, 771, 830, 976
Hpy8I GTNNAC 1 cut(s) 952
HpyAV CCTTC 4 cut(s) 17, 423, 446, 982
HpyCH4III ACNGT 1 cut(s) 909
HpyCH4V TGCA 5 cut(s) 168, 247, 279, 807, 995
HpyF10VI GCNNNNNNNGC 1 cut(s) 374
HpyF3I CTNAG 5 cut(s) 57, 99, 160, 441, 696
Hsp92II CATG 4 cut(s) 18, 177, 470, 582
Kpn2I TCCGGA 1 cut(s) 770
Kzo9I GATC 2 cut(s) 568, 739
Lsp1109I GCAGC 1 cut(s) 581
LweI GCATC 4 cut(s) 364, 469, 493, 982
MabI ACCWGGT 1 cut(s) 894
MaeIII GTNAC 3 cut(s) 430, 470, 508
MalI GATC 2 cut(s) 570, 741
MboI GATC 2 cut(s) 568, 739
MboII GAAGA 3 cut(s) 32, 878, 974
MflI RGATCY 1 cut(s) 739
MhlI GDGCHC 2 cut(s) 303, 695
MlsI TGGCCA 1 cut(s) 539
MluCI AATT 4 cut(s) 139, 287, 702, 878
MluNI TGGCCA 1 cut(s) 539
MlyI GAGTC 1 cut(s) 707
MmeI TCCRAC 1 cut(s) 317
MnlI CCTC 7 cut(s) 44, 58, 94, 169, 582, 585, 598
Mox20I TGGCCA 1 cut(s) 539
MroI TCCGGA 1 cut(s) 770
MroXI GAANNNNTTC 1 cut(s) 624
MscI TGGCCA 1 cut(s) 539
MseI TTAA 5 cut(s) 200, 225, 453, 615, 912
Msp20I TGGCCA 1 cut(s) 539
MspA1I CMGCKG 1 cut(s) 940
MspI CCGG 2 cut(s) 651, 771
MspR9I CCNGG 1 cut(s) 896
MssI GTTTAAAC 1 cut(s) 226
MvaI CCWGG 1 cut(s) 896
MwoI GCNNNNNNNGC 1 cut(s) 374
NdeII GATC 2 cut(s) 568, 739
NlaIII CATG 4 cut(s) 18, 177, 470, 582
NlaIV GGNNCC 1 cut(s) 410
NmuCI GTSAC 3 cut(s) 430, 470, 508
PdmI GAANNNNTTC 1 cut(s) 624
PfeI GAWTC 2 cut(s) 11, 319
PinAI ACCGGT 1 cut(s) 650
PkrI GCNGC 1 cut(s) 596
PleI GAGTC 1 cut(s) 706
PmeI GTTTAAAC 1 cut(s) 226
PpsI GAGTC 1 cut(s) 706
PpuMI RGGWCCY 1 cut(s) 232
PsiI TTATAA 1 cut(s) 393
Psp5II RGGWCCY 1 cut(s) 232
Psp6I CCWGG 1 cut(s) 894
PspGI CCWGG 1 cut(s) 894
PspN4I GGNNCC 1 cut(s) 410
PspPI GGNCC 2 cut(s) 232, 859
PspPPI RGGWCCY 1 cut(s) 232
PsuI RGATCY 1 cut(s) 739
PvuII CAGCTG 1 cut(s) 940
RsaI GTAC 2 cut(s) 157, 343
RsaNI GTAC 2 cut(s) 156, 342
SaqAI TTAA 5 cut(s) 200, 225, 453, 615, 912
SatI GCNGC 1 cut(s) 595
Sau3AI GATC 2 cut(s) 568, 739
Sau96I GGNCC 2 cut(s) 232, 859
SchI GAGTC 1 cut(s) 707
ScrFI CCNGG 1 cut(s) 896
SduI GDGCHC 2 cut(s) 303, 695
SexAI ACCWGGT 1 cut(s) 894
SfaNI GCATC 4 cut(s) 364, 469, 493, 982
SgrAI CRCCGGYG 1 cut(s) 650
SinI GGWCC 2 cut(s) 232, 859
SmlI CTYRAG 2 cut(s) 302, 930
SmoI CTYRAG 2 cut(s) 302, 930
Sse9I AATT 4 cut(s) 139, 287, 702, 878
SsiI CCGC 1 cut(s) 377
SspI AATATT 1 cut(s) 312
StyD4I CCNGG 1 cut(s) 894
StyI CCWWGG 1 cut(s) 217
TaaI ACNGT 1 cut(s) 909
TasI AATT 4 cut(s) 139, 287, 702, 878
TfiI GAWTC 2 cut(s) 11, 319
Tru1I TTAA 5 cut(s) 200, 225, 453, 615, 912
Tru9I TTAA 5 cut(s) 200, 225, 453, 615, 912
TscAI CASTG 4 cut(s) 82, 540, 635, 700
TseFI GTSAC 3 cut(s) 430, 470, 508
TseI GCWGC 1 cut(s) 594
Tsp45I GTSAC 3 cut(s) 430, 470, 508
TspDTI ATGAA 5 cut(s) 267, 602, 633, 721, 975
TspGWI ACGGA 3 cut(s) 312, 632, 833
TspRI CASTG 4 cut(s) 82, 540, 635, 700
VpaK11BI GGWCC 2 cut(s) 232, 859
XapI RAATTY 1 cut(s) 287
XcmI CCANNNNNNNNNTGG 1 cut(s) 142
XmnI GAANNNNTTC 1 cut(s) 624
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.