Rh5CG437000

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000068
Physical Location & Seq
Forward (+)
60557236 .. 60560704
3469 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG437000.1

Sequence Viewer

Length: 1278 bp
ATGTCAAGAAAGAAATTGGATTCTGAAGCAAAGTTGGACACTTTCCCTGAGGAAATCCGTCAGGATATCTTTCTTAGACTACCCATTAAGTCTTTGATCAGGTGCACAGCTGTGCGCAAGGCATGGAGATCAGTCATAAGAAACCCAAGCTTTATTCGCACCCACCTCCGCCGGACACAGAATTCCAATGAACAGAATGACACTCAACTCTTATTGATCCATGGTTTTGCTAAAAAGGCTTTTAGCTTTGATTACAGTGATAGTGAGGATGACATACAGGAGCTTTACTCTTTGCATTATGATAACCCTGCGTTTGACGAGCACTGCAAGGTTGAAGTTCCAACTATTGAGTTGGCGAATGCATGTTTCCGTGTTGTTGGCACTTGTAATGGGCTGGTTTGCCTTGCAGATGATTTAGGGTTATATATGAACACCTACATATTATCAAATCCATCTATAAGAAAGTCTGTGGCCCTTCCCCAGCATAATGTTACATATTGCACTCATGGTGGGCATGTAGCTTCTATTGGGTTTGGTTTTGATGCTATGACCAACGACTACAAGGTTGTGAGGCTTGTCACTCTTTTGGATGAAGATTCACAAGATGCCCTTTGTCGAACTGTAGTTGAAGTTTTTTCACTAGCCACAGGCTCTTGGAGCATGCTTCCTGATGTTGCTCCTCGGTTTGAAATGGATGCACGCACTCCCCAGGCTTTAGTTAATGGGGCTCTTCATTGGCACGCAAAGCGGCGGAAAGAAGATGATCTTTACTATTTCATTTTGATATTTGATGTCAGCAGGGGTTTATTTCGTGAGACCATGATGCCAGAGAGTTTGAAATGCGATCCGGAATTAACATTGCAGTTATCTGTTTCTGGAGATGGGAAGTCCATTGCTCTGTTCAGCATGTATTCTAGTCATTTTTGTGCAGATCCTTTTTTTGATATCTGGGTAATGAATGAATATTGCATCCATGAGTCCTGGACCAAATTGATTCGACTCCGTCCACATGGGGCACCACATGAAGTTCTTTTATTAAGTAGTTTGCTCCCAGAAGCATTATGTTTCAGGAAAAGCAGTGAAGTAGTAGTGTCCAAACAAGGTGATACATTCTCCTGTTCCAGGCATTGTTATTGTCCTGGGTATGAACTATTTTCAATAGACCTTGGAAGCCAACAATTTAAGAGTCTTGGGATTTGTGGATATAGTTATTACACTGTCAATTCTTATGAAGAGAGCCTCGTCTTACTGGACATGGACAATGCAGTTTGCTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

425

Amino Acids

48.43

Weight (kDa)

5.62

Isoelectric Point (pI)

46.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 16 - 54 6.5e-06 F-box-like
FBA_3 PF08268 105 - 336 3e-14 F-box associated beta propeller domain
FBA_1 PF07734 120 - 344 1.6e-23 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 124 - 265 1e-08 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 116
AccB1I GGYRCC 1 cut(s) 1015
AccIII TCCGGA 1 cut(s) 847
AciI CCGC 3 cut(s) 169, 748, 751
AclWI GGATC 3 cut(s) 211, 839, 926
AcsI RAATTY 1 cut(s) 181
AcuI CTGAAG 1 cut(s) 45
AfiI CCNNNNNNNGG 1 cut(s) 1122
AgsI TTSAA 5 cut(s) 335, 629, 689, 838, 1158
AjnI CCWGG 4 cut(s) 708, 980, 1121, 1138
AleI CACNNNNGTG 1 cut(s) 110
AluBI AGCT 5 cut(s) 110, 150, 246, 283, 521
AluI AGCT 5 cut(s) 110, 150, 246, 283, 521
Alw21I GWGCWC 2 cut(s) 107, 324
Alw26I GTCTC 1 cut(s) 809
Alw44I GTGCAC 1 cut(s) 103
AlwI GGATC 3 cut(s) 211, 839, 926
Aor13HI TCCGGA 1 cut(s) 847
AoxI GGCC 1 cut(s) 471
ApaLI GTGCAC 1 cut(s) 103
ApoI RAATTY 1 cut(s) 181
AspLEI GCGC 1 cut(s) 117
AspS9I GGNCC 2 cut(s) 472, 984
AsuHPI GGTGA 1 cut(s) 1115
AvaII GGWCC 1 cut(s) 984
AxyI CCTNAGG 1 cut(s) 48
BaeGI GKGCMC 2 cut(s) 107, 1018
BanI GGYRCC 1 cut(s) 1015
BanII GRGCYC 1 cut(s) 730
Bbv12I GWGCWC 2 cut(s) 107, 324
BccI CCATC 2 cut(s) 460, 875
BciT130I CCWGG 4 cut(s) 710, 982, 1123, 1140
BclI TGATCA 1 cut(s) 96
BcoDI GTCTC 1 cut(s) 809
BfaI CTAG 2 cut(s) 641, 915
BfmI CTRYAG 1 cut(s) 621
BisI GCNGC 1 cut(s) 749
BlsI GCNGC 1 cut(s) 750
Bme1390I CCNGG 4 cut(s) 710, 982, 1123, 1140
Bme18I GGWCC 1 cut(s) 984
BmgT120I GGNCC 2 cut(s) 472, 984
BmiI GGNNCC 1 cut(s) 1017
BmrFI CCNGG 4 cut(s) 710, 982, 1123, 1140
BmsI GCATC 5 cut(s) 532, 595, 685, 813, 978
BplI GAGNNNNNCTC 2 cut(s) 272, 304
BpmI CTGGAG 1 cut(s) 897
BsaI GGTCTC 1 cut(s) 809
BsaJI CCNNGG 5 cut(s) 220, 680, 708, 1139, 1165
BsaWI WCCGGW 1 cut(s) 847
Bsc4I CCNNNNNNNGG 1 cut(s) 1122
Bse1I ACTGG 1 cut(s) 1254
Bse21I CCTNAGG 1 cut(s) 48
Bse3DI GCAATG 2 cut(s) 857, 891
BseAI TCCGGA 1 cut(s) 847
BseBI CCWGG 4 cut(s) 710, 982, 1123, 1140
BseDI CCNNGG 5 cut(s) 220, 680, 708, 1139, 1165
BseGI GGATG 4 cut(s) 274, 595, 700, 969
BseLI CCNNNNNNNGG 1 cut(s) 1122
BseMI GCAATG 2 cut(s) 857, 891
BseMII CTCAG 1 cut(s) 39
BseNI ACTGG 1 cut(s) 1254
BseRI GAGGAG 1 cut(s) 669
BseSI GKGCMC 2 cut(s) 107, 1018
BseYI CCCAGC 1 cut(s) 480
BsgI GTGCAG 1 cut(s) 948
BshFI GGCC 1 cut(s) 473
BshNI GGYRCC 1 cut(s) 1015
BsiHKAI GWGCWC 2 cut(s) 107, 324
BsiSI CCGG 2 cut(s) 172, 848
BslI CCNNNNNNNGG 1 cut(s) 1122
BsmAI GTCTC 1 cut(s) 809
BsmI GAATGC 1 cut(s) 364
BsnI GGCC 1 cut(s) 473
Bso31I GGTCTC 1 cut(s) 809
Bsp1286I GDGCHC 4 cut(s) 107, 324, 730, 1018
Bsp13I TCCGGA 1 cut(s) 847
Bsp143I GATC 6 cut(s) 96, 128, 216, 763, 844, 931
Bsp19I CCATGG 1 cut(s) 220
BspACI CCGC 3 cut(s) 169, 748, 751
BspANI GGCC 1 cut(s) 473
BspCNI CTCAG 1 cut(s) 40
BspEI TCCGGA 1 cut(s) 847
BspLI GGNNCC 1 cut(s) 1017
BspPI GGATC 3 cut(s) 211, 839, 926
BspQI GCTCTTC 1 cut(s) 735
BspT107I GGYRCC 1 cut(s) 1015
BspTNI GGTCTC 1 cut(s) 809
BsrDI GCAATG 2 cut(s) 857, 891
BsrI ACTGG 1 cut(s) 1254
BssECI CCNNGG 5 cut(s) 220, 680, 708, 1139, 1165
BssMI GATC 6 cut(s) 96, 128, 216, 763, 844, 931
BssT1I CCWWGG 2 cut(s) 220, 1165
Bst2UI CCWGG 4 cut(s) 710, 982, 1123, 1140
Bst4CI ACNGT 3 cut(s) 257, 622, 1219
Bst6I CTCTTC 2 cut(s) 735, 1227
BstC8I GCNNGC 3 cut(s) 662, 700, 741
BstDEI CTNAG 2 cut(s) 48, 74
BstDSI CCRYGG 1 cut(s) 220
BstENI CCTNNNNNAGG 1 cut(s) 1120
BstF5I GGATG 4 cut(s) 274, 595, 700, 969
BstHHI GCGC 1 cut(s) 117
BstKTI GATC 6 cut(s) 99, 131, 219, 766, 847, 934
BstMAI GTCTC 1 cut(s) 809
BstMBI GATC 6 cut(s) 96, 128, 216, 763, 844, 931
BstMWI GCNNNNNNNGC 4 cut(s) 156, 236, 657, 745
BstNI CCWGG 4 cut(s) 710, 982, 1123, 1140
BstNSI RCATGY 4 cut(s) 366, 518, 664, 910
BstSCI CCNGG 4 cut(s) 708, 980, 1121, 1138
BstSFI CTRYAG 1 cut(s) 621
BstSLI GKGCMC 2 cut(s) 107, 1018
BstX2I RGATCY 1 cut(s) 931
BstYI RGATCY 1 cut(s) 931
Bsu36I CCTNAGG 1 cut(s) 48
BsuRI GGCC 1 cut(s) 473
BtgI CCRYGG 1 cut(s) 220
BtsCI GGATG 4 cut(s) 274, 595, 700, 969
BtsI GCAGTG 2 cut(s) 322, 1084
BtsIMutI CAGTG 4 cut(s) 262, 322, 1084, 1215
Cac8I GCNNGC 3 cut(s) 662, 700, 741
CfoI GCGC 1 cut(s) 117
Cfr13I GGNCC 2 cut(s) 472, 984
DdeI CTNAG 2 cut(s) 48, 74
DpnI GATC 6 cut(s) 98, 130, 218, 765, 846, 933
DpnII GATC 6 cut(s) 96, 128, 216, 763, 844, 931
Eam1104I CTCTTC 2 cut(s) 735, 1227
EarI CTCTTC 2 cut(s) 735, 1227
EciI GGCGGA 2 cut(s) 158, 766
Eco130I CCWWGG 2 cut(s) 220, 1165
Eco24I GRGCYC 1 cut(s) 730
Eco31I GGTCTC 1 cut(s) 809
Eco32I GATATC 2 cut(s) 67, 946
Eco47I GGWCC 1 cut(s) 984
Eco57I CTGAAG 1 cut(s) 45
Eco81I CCTNAGG 1 cut(s) 48
EcoNI CCTNNNNNAGG 1 cut(s) 1120
EcoRI GAATTC 1 cut(s) 181
EcoRII CCWGG 4 cut(s) 708, 980, 1121, 1138
EcoRV GATATC 2 cut(s) 67, 946
EcoT14I CCWWGG 2 cut(s) 220, 1165
EcoT22I ATGCAT 1 cut(s) 364
EcoT38I GRGCYC 1 cut(s) 730
ErhI CCWWGG 2 cut(s) 220, 1165
FalI AAGNNNNNCTT 4 cut(s) 594, 626, 750, 782
FbaI TGATCA 1 cut(s) 96
Fnu4HI GCNGC 1 cut(s) 749
FokI GGATG 4 cut(s) 281, 602, 707, 956
FriOI GRGCYC 1 cut(s) 730
Fsp4HI GCNGC 1 cut(s) 749
FspBI CTAG 2 cut(s) 641, 915
FspI TGCGCA 1 cut(s) 116
GlaI GCGC 1 cut(s) 116
GluI GCNGC 1 cut(s) 749
GsaI CCCAGC 1 cut(s) 484
GsuI CTGGAG 1 cut(s) 897
HaeIII GGCC 1 cut(s) 473
HapII CCGG 2 cut(s) 172, 848
HhaI GCGC 1 cut(s) 117
Hin6I GCGC 1 cut(s) 115
HinP1I GCGC 1 cut(s) 115
HindIII AAGCTT 1 cut(s) 148
HinfI GANTC 6 cut(s) 20, 596, 977, 994, 999, 1186
HpaII CCGG 2 cut(s) 172, 848
HphI GGTGA 1 cut(s) 1115
Hpy166II GTNNAC 2 cut(s) 105, 1007
Hpy188I TCNGA 1 cut(s) 25
Hpy188III TCNNGA 7 cut(s) 6, 62, 668, 812, 848, 876, 1069
Hpy8I GTNNAC 2 cut(s) 105, 1007
HpyAV CCTTC 1 cut(s) 485
HpyCH4III ACNGT 3 cut(s) 257, 622, 1219
HpyF10VI GCNNNNNNNGC 4 cut(s) 156, 236, 657, 745
HpyF3I CTNAG 2 cut(s) 48, 74
HspAI GCGC 1 cut(s) 115
Kpn2I TCCGGA 1 cut(s) 847
Ksp22I TGATCA 1 cut(s) 96
Kzo9I GATC 6 cut(s) 96, 128, 216, 763, 844, 931
LguI GCTCTTC 1 cut(s) 735
LmnI GCTCC 4 cut(s) 280, 657, 682, 1053
LweI GCATC 5 cut(s) 532, 595, 685, 813, 978
MaeI CTAG 2 cut(s) 641, 915
MaeIII GTNAC 2 cut(s) 490, 577
MalI GATC 6 cut(s) 98, 130, 218, 765, 846, 933
MboI GATC 6 cut(s) 96, 128, 216, 763, 844, 931
MboII GAAGA 4 cut(s) 605, 722, 770, 1244
MflI RGATCY 1 cut(s) 931
MhlI GDGCHC 4 cut(s) 107, 324, 730, 1018
MluCI AATT 6 cut(s) 14, 181, 851, 989, 1178, 1222
MlyI GAGTC 3 cut(s) 986, 993, 1195
MmeI TCCRAC 2 cut(s) 15, 365
MnlI CCTC 6 cut(s) 43, 176, 259, 564, 690, 1250
Mph1103I ATGCAT 1 cut(s) 364
MroI TCCGGA 1 cut(s) 847
MseI TTAA 5 cut(s) 87, 720, 854, 1037, 1182
MslI CAYNNNNRTG 2 cut(s) 110, 924
MspA1I CMGCKG 1 cut(s) 110
MspI CCGG 2 cut(s) 172, 848
MspR9I CCNGG 4 cut(s) 710, 982, 1123, 1140
Mva1269I GAATGC 1 cut(s) 364
MvaI CCWGG 4 cut(s) 710, 982, 1123, 1140
MwoI GCNNNNNNNGC 4 cut(s) 156, 236, 657, 745
NcoI CCATGG 1 cut(s) 220
NdeII GATC 6 cut(s) 96, 128, 216, 763, 844, 931
NlaIV GGNNCC 1 cut(s) 1017
NmuCI GTSAC 1 cut(s) 577
NsbI TGCGCA 1 cut(s) 116
NsiI ATGCAT 1 cut(s) 364
NspI RCATGY 4 cut(s) 366, 518, 664, 910
OliI CACNNNNGTG 1 cut(s) 110
PaeI GCATGC 1 cut(s) 664
PciSI GCTCTTC 1 cut(s) 735
PctI GAATGC 1 cut(s) 364
PfeI GAWTC 3 cut(s) 20, 596, 994
PflFI GACNNNGTC 1 cut(s) 1002
PfoI TCCNGGA 1 cut(s) 980
PkrI GCNGC 1 cut(s) 750
PleI GAGTC 3 cut(s) 985, 993, 1194
PpsI GAGTC 3 cut(s) 985, 993, 1194
Psp6I CCWGG 4 cut(s) 708, 980, 1121, 1138
PspFI CCCAGC 1 cut(s) 480
PspGI CCWGG 4 cut(s) 708, 980, 1121, 1138
PspN4I GGNNCC 1 cut(s) 1017
PspPI GGNCC 2 cut(s) 472, 984
PsuI RGATCY 1 cut(s) 931
PsyI GACNNNGTC 1 cut(s) 1002
PvuII CAGCTG 1 cut(s) 110
RseI CAYNNNNRTG 2 cut(s) 110, 924
SapI GCTCTTC 1 cut(s) 735
SaqAI TTAA 5 cut(s) 87, 720, 854, 1037, 1182
SatI GCNGC 1 cut(s) 749
Sau3AI GATC 6 cut(s) 96, 128, 216, 763, 844, 931
Sau96I GGNCC 2 cut(s) 472, 984
SchI GAGTC 3 cut(s) 986, 993, 1195
ScrFI CCNGG 4 cut(s) 710, 982, 1123, 1140
SduI GDGCHC 4 cut(s) 107, 324, 730, 1018
SfaNI GCATC 5 cut(s) 532, 595, 685, 813, 978
SfcI CTRYAG 1 cut(s) 621
SinI GGWCC 1 cut(s) 984
SmiMI CAYNNNNRTG 2 cut(s) 110, 924
SphI GCATGC 1 cut(s) 664
Sse9I AATT 6 cut(s) 14, 181, 851, 989, 1178, 1222
SsiI CCGC 3 cut(s) 169, 748, 751
SspI AATATT 1 cut(s) 965
SspMI CTAG 2 cut(s) 641, 915
StyD4I CCNGG 4 cut(s) 708, 980, 1121, 1138
StyI CCWWGG 2 cut(s) 220, 1165
TaaI ACNGT 3 cut(s) 257, 622, 1219
TaqI TCGA 2 cut(s) 616, 997
TasI AATT 6 cut(s) 14, 181, 851, 989, 1178, 1222
TauI GCSGC 1 cut(s) 751
TfiI GAWTC 3 cut(s) 20, 596, 994
Tru1I TTAA 5 cut(s) 87, 720, 854, 1037, 1182
Tru9I TTAA 5 cut(s) 87, 720, 854, 1037, 1182
TscAI CASTG 4 cut(s) 262, 329, 1084, 1222
TseFI GTSAC 1 cut(s) 577
Tsp45I GTSAC 1 cut(s) 577
TspGWI ACGGA 3 cut(s) 47, 359, 992
TspRI CASTG 4 cut(s) 262, 329, 1084, 1222
Tth111I GACNNNGTC 1 cut(s) 1002
VneI GTGCAC 1 cut(s) 103
VpaK11BI GGWCC 1 cut(s) 984
XagI CCTNNNNNAGG 1 cut(s) 1120
XapI RAATTY 1 cut(s) 181
XceI RCATGY 4 cut(s) 366, 518, 664, 910
XspI CTAG 2 cut(s) 641, 915
Zsp2I ATGCAT 1 cut(s) 364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.