F-box kelch-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PRP8_domainIV | PF12134 | 61 - 153 | 1.5e-08 | PRP8 domain IV core |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 209 |
| AfaI | GTAC | 1 cut(s) | 137 |
| AflIII | ACRYGT | 1 cut(s) | 438 |
| AgsI | TTSAA | 2 cut(s) | 316, 343 |
| AjnI | CCWGG | 1 cut(s) | 64 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 137, 169 |
| AluBI | AGCT | 6 cut(s) | 20, 41, 116, 334, 383, 388 |
| AluI | AGCT | 6 cut(s) | 20, 41, 116, 334, 383, 388 |
| Alw21I | GWGCWC | 2 cut(s) | 249, 326 |
| Alw26I | GTCTC | 1 cut(s) | 90 |
| Alw44I | GTGCAC | 2 cut(s) | 245, 322 |
| ApaLI | GTGCAC | 2 cut(s) | 245, 322 |
| ApeKI | GCWGC | 4 cut(s) | 254, 331, 334, 359 |
| BaeGI | GKGCMC | 2 cut(s) | 249, 326 |
| BauI | CACGAG | 1 cut(s) | 248 |
| BbsI | GAAGAC | 1 cut(s) | 350 |
| Bbv12I | GWGCWC | 2 cut(s) | 249, 326 |
| BbvI | GCAGC | 4 cut(s) | 266, 321, 343, 346 |
| BciT130I | CCWGG | 1 cut(s) | 66 |
| BclI | TGATCA | 1 cut(s) | 457 |
| BcoDI | GTCTC | 1 cut(s) | 90 |
| BisI | GCNGC | 4 cut(s) | 255, 332, 335, 360 |
| BlpI | GCTNAGC | 1 cut(s) | 384 |
| BlsI | GCNGC | 4 cut(s) | 256, 333, 336, 361 |
| Bme1390I | CCNGG | 1 cut(s) | 66 |
| BmiI | GGNNCC | 1 cut(s) | 174 |
| BmrFI | CCNGG | 1 cut(s) | 66 |
| BmsI | GCATC | 1 cut(s) | 81 |
| BpiI | GAAGAC | 1 cut(s) | 350 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 149, 181 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 384 |
| BpuEI | CTTGAG | 1 cut(s) | 148 |
| BsaJI | CCNNGG | 1 cut(s) | 64 |
| Bse1I | ACTGG | 1 cut(s) | 404 |
| BseBI | CCWGG | 1 cut(s) | 66 |
| BseDI | CCNNGG | 1 cut(s) | 64 |
| BseGI | GGATG | 3 cut(s) | 194, 415, 460 |
| BseMII | CTCAG | 1 cut(s) | 375 |
| BseNI | ACTGG | 1 cut(s) | 404 |
| BseSI | GKGCMC | 2 cut(s) | 249, 326 |
| BseXI | GCAGC | 4 cut(s) | 266, 321, 343, 346 |
| BseYI | CCCAGC | 1 cut(s) | 112 |
| BsiHKAI | GWGCWC | 2 cut(s) | 249, 326 |
| BsmAI | GTCTC | 1 cut(s) | 90 |
| BsmI | GAATGC | 2 cut(s) | 311, 456 |
| Bsp1286I | GDGCHC | 2 cut(s) | 249, 326 |
| Bsp143I | GATC | 1 cut(s) | 457 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 384 |
| BspACI | CCGC | 1 cut(s) | 209 |
| BspCNI | CTCAG | 1 cut(s) | 376 |
| BspLI | GGNNCC | 1 cut(s) | 174 |
| BsrI | ACTGG | 1 cut(s) | 404 |
| BssECI | CCNNGG | 1 cut(s) | 64 |
| BssMI | GATC | 1 cut(s) | 457 |
| BssSI | CACGAG | 1 cut(s) | 248 |
| Bst2BI | CACGAG | 1 cut(s) | 248 |
| Bst2UI | CCWGG | 1 cut(s) | 66 |
| Bst4CI | ACNGT | 2 cut(s) | 153, 186 |
| Bst6I | CTCTTC | 1 cut(s) | 172 |
| BstDEI | CTNAG | 1 cut(s) | 384 |
| BstF5I | GGATG | 3 cut(s) | 194, 415, 460 |
| BstKTI | GATC | 1 cut(s) | 460 |
| BstMAI | GTCTC | 1 cut(s) | 90 |
| BstMBI | GATC | 1 cut(s) | 457 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 308 |
| BstNI | CCWGG | 1 cut(s) | 66 |
| BstNSI | RCATGY | 1 cut(s) | 442 |
| BstSCI | CCNGG | 1 cut(s) | 64 |
| BstSLI | GKGCMC | 2 cut(s) | 249, 326 |
| BstV1I | GCAGC | 4 cut(s) | 266, 321, 343, 346 |
| BstV2I | GAAGAC | 1 cut(s) | 350 |
| BtsCI | GGATG | 3 cut(s) | 194, 415, 460 |
| Csp6I | GTAC | 1 cut(s) | 136 |
| CviAII | CATG | 4 cut(s) | 103, 356, 439, 455 |
| CviJI | RGCY | 9 cut(s) | 20, 41, 83, 116, 175, 257, 334, 383, 388 |
| CviKI_1 | RGCY | 9 cut(s) | 20, 41, 83, 116, 175, 257, 334, 383, 388 |
| CviQI | GTAC | 1 cut(s) | 136 |
| DdeI | CTNAG | 1 cut(s) | 384 |
| DpnI | GATC | 1 cut(s) | 459 |
| DpnII | GATC | 1 cut(s) | 457 |
| Eam1104I | CTCTTC | 1 cut(s) | 172 |
| EarI | CTCTTC | 1 cut(s) | 172 |
| EcoRII | CCWGG | 1 cut(s) | 64 |
| EcoT22I | ATGCAT | 1 cut(s) | 456 |
| FaeI | CATG | 4 cut(s) | 106, 359, 442, 458 |
| FaiI | YATR | 7 cut(s) | 104, 140, 207, 357, 440, 456, 487 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 413, 445 |
| FatI | CATG | 4 cut(s) | 102, 355, 438, 454 |
| FbaI | TGATCA | 1 cut(s) | 457 |
| Fnu4HI | GCNGC | 4 cut(s) | 255, 332, 335, 360 |
| FokI | GGATG | 3 cut(s) | 181, 402, 447 |
| Fsp4HI | GCNGC | 4 cut(s) | 255, 332, 335, 360 |
| GluI | GCNGC | 4 cut(s) | 255, 332, 335, 360 |
| GsaI | CCCAGC | 1 cut(s) | 116 |
| Hin1II | CATG | 4 cut(s) | 106, 359, 442, 458 |
| HinfI | GANTC | 2 cut(s) | 158, 426 |
| Hpy166II | GTNNAC | 3 cut(s) | 247, 324, 436 |
| Hpy188I | TCNGA | 2 cut(s) | 120, 172 |
| Hpy188III | TCNNGA | 2 cut(s) | 127, 340 |
| Hpy8I | GTNNAC | 3 cut(s) | 247, 324, 436 |
| HpyCH4III | ACNGT | 2 cut(s) | 153, 186 |
| HpyCH4V | TGCA | 5 cut(s) | 25, 88, 247, 324, 454 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 308 |
| HpyF3I | CTNAG | 1 cut(s) | 384 |
| Hsp92II | CATG | 4 cut(s) | 106, 359, 442, 458 |
| Ksp22I | TGATCA | 1 cut(s) | 457 |
| Kzo9I | GATC | 1 cut(s) | 457 |
| LmnI | GCTCC | 1 cut(s) | 172 |
| LpnPI | CCDG | 4 cut(s) | 51, 78, 126, 417 |
| Lsp1109I | GCAGC | 4 cut(s) | 266, 321, 343, 346 |
| LweI | GCATC | 1 cut(s) | 81 |
| MaeIII | GTNAC | 1 cut(s) | 271 |
| MalI | GATC | 1 cut(s) | 459 |
| MboI | GATC | 1 cut(s) | 457 |
| MboII | GAAGA | 4 cut(s) | 16, 159, 211, 355 |
| MhlI | GDGCHC | 2 cut(s) | 249, 326 |
| MlyI | GAGTC | 1 cut(s) | 167 |
| MmeI | TCCRAC | 1 cut(s) | 135 |
| MnlI | CCTC | 3 cut(s) | 175, 244, 370 |
| Mph1103I | ATGCAT | 1 cut(s) | 456 |
| MseI | TTAA | 1 cut(s) | 107 |
| MspA1I | CMGCKG | 1 cut(s) | 334 |
| MspR9I | CCNGG | 1 cut(s) | 66 |
| Mva1269I | GAATGC | 2 cut(s) | 311, 456 |
| MvaI | CCWGG | 1 cut(s) | 66 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 308 |
| NdeII | GATC | 1 cut(s) | 457 |
| NlaIII | CATG | 4 cut(s) | 106, 359, 442, 458 |
| NlaIV | GGNNCC | 1 cut(s) | 174 |
| NsiI | ATGCAT | 1 cut(s) | 456 |
| NspI | RCATGY | 1 cut(s) | 442 |
| PciI | ACATGT | 1 cut(s) | 438 |
| PctI | GAATGC | 2 cut(s) | 311, 456 |
| PfeI | GAWTC | 1 cut(s) | 426 |
| PkrI | GCNGC | 4 cut(s) | 256, 333, 336, 361 |
| PleI | GAGTC | 1 cut(s) | 166 |
| PpsI | GAGTC | 1 cut(s) | 166 |
| PscI | ACATGT | 1 cut(s) | 438 |
| Psp6I | CCWGG | 1 cut(s) | 64 |
| PspFI | CCCAGC | 1 cut(s) | 112 |
| PspGI | CCWGG | 1 cut(s) | 64 |
| PspN4I | GGNNCC | 1 cut(s) | 174 |
| PvuII | CAGCTG | 1 cut(s) | 334 |
| RsaI | GTAC | 1 cut(s) | 137 |
| RsaNI | GTAC | 1 cut(s) | 136 |
| SaqAI | TTAA | 1 cut(s) | 107 |
| SatI | GCNGC | 4 cut(s) | 255, 332, 335, 360 |
| Sau3AI | GATC | 1 cut(s) | 457 |
| SchI | GAGTC | 1 cut(s) | 167 |
| ScrFI | CCNGG | 1 cut(s) | 66 |
| SduI | GDGCHC | 2 cut(s) | 249, 326 |
| SetI | ASST | 8 cut(s) | 22, 43, 70, 118, 336, 381, 385, 390 |
| SfaNI | GCATC | 1 cut(s) | 81 |
| SmlI | CTYRAG | 1 cut(s) | 127 |
| SmoI | CTYRAG | 1 cut(s) | 127 |
| SsiI | CCGC | 1 cut(s) | 209 |
| StyD4I | CCNGG | 1 cut(s) | 64 |
| TaaI | ACNGT | 2 cut(s) | 153, 186 |
| TaqI | TCGA | 1 cut(s) | 11 |
| TatI | WGTACW | 1 cut(s) | 135 |
| TfiI | GAWTC | 1 cut(s) | 426 |
| Tru1I | TTAA | 1 cut(s) | 107 |
| Tru9I | TTAA | 1 cut(s) | 107 |
| TseI | GCWGC | 4 cut(s) | 254, 331, 334, 359 |
| TspDTI | ATGAA | 3 cut(s) | 17, 68, 91 |
| TspGWI | ACGGA | 2 cut(s) | 194, 309 |
| VneI | GTGCAC | 2 cut(s) | 245, 322 |
| XceI | RCATGY | 1 cut(s) | 442 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 234 |
| Zsp2I | ATGCAT | 1 cut(s) | 456 |