FvH4_3g39320

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000068
Physical Location & Seq
Reverse (-)
33469540 .. 33472657
3118 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g39320.t1

Sequence Viewer

Length: 1332 bp
ATGTGTGGAAATTGCAGAAAGAAAATGGAATCTGAAGCAAAGTTTGATGCTTTTCCTCTGGAAATCCGTCTGGATATCTTTCATAGACTACCCATTAAGTCTTTAATCCGATGCACCGCTGTGCGCAAGGCATGGAGATCAGTCATAAGAAACCCGAGCTTTATTCGCACCCACCTTCGCCGCACAATGGAGTCTAATGACCAGAATGACACTCATCTCTTGTTGATCCATGGTTTTTCTGTGAAACCAACCTATGCCTTTTATTACAGTGATGGTGAGGATGACAGCGATATTGTGGCAAAGACACTGGAGCTTTACTCTTTGCATTATGATAACCCTGCTTTTGGTGAGCACTGCGAGGTTGAAGTTCCTTCTGATCAGTTGGTGAATGAATGCTTCCGTGTTGTGGCCACTTGTAATGGGCTGGTCTGCCTTGCAGATGATTTGATGCAATATTGCAACACCCACATATACTTAGCGAATCCATCTATAAGAAAGTTTGTGACCCTTCCTGAGCCTAATGTCACATATCGGACACATGGTGGGTATGACGCTTCTATTGGGTTTGCTTTTGATGCTATGACGAGCGACTATAAGGTTCTGAGGCTTGTTACTCTTAGGGATGAAGTTGAACATTCACAGGATCGCACTGTAGCTGAGGTTTTTTCACTAGCCACTGGTTGTTGGAGCATGCTATCTGATGTCACTCATCGGTTTCAAATGGATCCACGCACTCCCCAGGCTTTTGTTAATGGGGCTCTTCACTGGCACGCAAAGCGTTGGAAAGAACATGATCTTTACTATTTCATTTTGATATTTGACGTGGGCAGGGGTTTATTACGTGAGACCATGATGCCAGAGAGTTTGGAGGGCGGTAGACCATTAACATTGCAATTGTCTGTTTCTGGAGATGGGAAGTCCATTGCTCTGTTCCACCTGTATTGTAGTTATTTTTGTGAAGATCCTTTCTGTGATATCTGGGTAATGAATGACTATTGCATCCATGAGTCCTGGACCAAATTGATTCGACTCCGTCCACAAGGGCCAGAACAGGATGGTCTCCTCTTGAGTAGTTTGCTCCCCAGAGCATTATGTTTCAGGAAAAGCAATGAAGTAGTGGTGTTCAAACAAAGTCATATATCCTCATGTTCCAGACATCCTTCTTGTCATGGGTATGAGCTATTTTCGATAGACCTTGCCAAAAATGTAATAGTCTTGGGATATGTGGACATTTTTATTACACTGTCGATTCTTATGAAGAGAGCCTTGTCTTGCTGGACATGGACAATGCAGTTTCCTACTGAGGCAAAGAATAGATCTGTAGAGCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

444

Amino Acids

51.04

Weight (kDa)

6.31

Isoelectric Point (pI)

44.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 19 - 57 1.8e-06 F-box-like
FBA_1 PF07734 113 - 376 5.5e-21 F-box associated beta propeller domain
FBA_3 PF08268 115 - 342 5.2e-14 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 125
AccI GTMKAC 1 cut(s) 877
AciI CCGC 3 cut(s) 117, 181, 873
AclWI GGATC 5 cut(s) 220, 651, 719, 732, 956
AcoI YGGCCR 1 cut(s) 408
AcuI CTGAAG 1 cut(s) 54
AdeI CACNNNGTG 1 cut(s) 542
AfiI CCNNNNNNNGG 3 cut(s) 187, 344, 406
AgsI TTSAA 4 cut(s) 365, 632, 719, 1126
AjiI CACGTC 1 cut(s) 823
AjnI CCWGG 2 cut(s) 738, 1010
AleI CACNNNNGTG 1 cut(s) 119
AluBI AGCT 4 cut(s) 159, 313, 656, 1180
AluI AGCT 4 cut(s) 159, 313, 656, 1180
Alw21I GWGCWC 1 cut(s) 354
Alw26I GTCTC 2 cut(s) 839, 1064
AlwI GGATC 5 cut(s) 220, 651, 719, 732, 956
Ama87I CYCGRG 1 cut(s) 154
AoxI GGCC 2 cut(s) 408, 1043
AspLEI GCGC 1 cut(s) 126
AspS9I GGNCC 2 cut(s) 1014, 1043
AsuHPI GGTGA 3 cut(s) 287, 359, 397
AvaI CYCGRG 1 cut(s) 154
AvaII GGWCC 1 cut(s) 1014
BalI TGGCCA 1 cut(s) 410
BamHI GGATCC 1 cut(s) 724
BanII GRGCYC 1 cut(s) 760
Bbv12I GWGCWC 1 cut(s) 354
BbvCI CCTCAGC 1 cut(s) 657
BccI CCATC 4 cut(s) 266, 493, 905, 1049
BciT130I CCWGG 2 cut(s) 740, 1012
BclI TGATCA 1 cut(s) 376
BcoDI GTCTC 2 cut(s) 839, 1064
BfaI CTAG 1 cut(s) 671
BfmI CTRYAG 2 cut(s) 651, 1320
BglII AGATCT 1 cut(s) 1316
BisI GCNGC 1 cut(s) 181
BlsI GCNGC 1 cut(s) 182
Bme1390I CCNGG 2 cut(s) 740, 1012
Bme18I GGWCC 1 cut(s) 1014
BmeT110I CYCGRG 1 cut(s) 154
BmgBI CACGTC 1 cut(s) 823
BmgT120I GGNCC 2 cut(s) 1014, 1043
BmiI GGNNCC 1 cut(s) 726
BmrFI CCNGG 2 cut(s) 740, 1012
BmsI GCATC 6 cut(s) 37, 101, 438, 565, 843, 1008
BplI GAGNNNNNCTC 2 cut(s) 302, 334
BpmI CTGGAG 2 cut(s) 329, 927
Bpu10I CCTNAGC 2 cut(s) 513, 657
BpuEI CTTGAG 1 cut(s) 1087
BsaAI YACGTR 1 cut(s) 842
BsaI GGTCTC 2 cut(s) 839, 1064
BsaJI CCNNGG 2 cut(s) 229, 738
Bsc4I CCNNNNNNNGG 3 cut(s) 187, 344, 406
Bse1I ACTGG 3 cut(s) 312, 682, 770
Bse3DI GCAATG 3 cut(s) 887, 921, 1114
BseBI CCWGG 2 cut(s) 740, 1012
BseDI CCNNGG 2 cut(s) 229, 738
BseGI GGATG 5 cut(s) 286, 628, 999, 1060, 1156
BseLI CCNNNNNNNGG 3 cut(s) 187, 344, 406
BseMI GCAATG 3 cut(s) 887, 921, 1114
BseMII CTCAG 4 cut(s) 504, 593, 648, 1293
BseNI ACTGG 3 cut(s) 312, 682, 770
BseRI GAGGAG 1 cut(s) 1052
BshFI GGCC 2 cut(s) 410, 1045
BsiHKAI GWGCWC 1 cut(s) 354
BsiHKCI CYCGRG 1 cut(s) 154
BslI CCNNNNNNNGG 3 cut(s) 187, 344, 406
BsmAI GTCTC 2 cut(s) 839, 1064
BsmI GAATGC 1 cut(s) 398
BsnI GGCC 2 cut(s) 410, 1045
Bso31I GGTCTC 2 cut(s) 839, 1064
BsoBI CYCGRG 1 cut(s) 154
Bsp1286I GDGCHC 2 cut(s) 354, 760
Bsp143I GATC 8 cut(s) 137, 225, 376, 643, 724, 793, 961, 1316
Bsp19I CCATGG 1 cut(s) 229
BspACI CCGC 3 cut(s) 117, 181, 873
BspANI GGCC 2 cut(s) 410, 1045
BspCNI CTCAG 4 cut(s) 505, 594, 649, 1294
BspLI GGNNCC 1 cut(s) 726
BspPI GGATC 5 cut(s) 220, 651, 719, 732, 956
BspQI GCTCTTC 1 cut(s) 765
BspTNI GGTCTC 2 cut(s) 839, 1064
BsrDI GCAATG 3 cut(s) 887, 921, 1114
BsrI ACTGG 3 cut(s) 312, 682, 770
BssECI CCNNGG 2 cut(s) 229, 738
BssMI GATC 8 cut(s) 137, 225, 376, 643, 724, 793, 961, 1316
BssT1I CCWWGG 1 cut(s) 229
Bst2UI CCWGG 2 cut(s) 740, 1012
Bst4CI ACNGT 3 cut(s) 269, 652, 1245
Bst6I CTCTTC 2 cut(s) 765, 1253
BstBAI YACGTR 1 cut(s) 842
BstC8I GCNNGC 2 cut(s) 692, 771
BstDEI CTNAG 6 cut(s) 475, 513, 602, 617, 657, 1302
BstDSI CCRYGG 1 cut(s) 229
BstF5I GGATG 5 cut(s) 286, 628, 999, 1060, 1156
BstHHI GCGC 1 cut(s) 126
BstKTI GATC 8 cut(s) 140, 228, 379, 646, 727, 796, 964, 1319
BstMAI GTCTC 2 cut(s) 839, 1064
BstMBI GATC 8 cut(s) 137, 225, 376, 643, 724, 793, 961, 1316
BstMWI GCNNNNNNNGC 3 cut(s) 165, 575, 775
BstNI CCWGG 2 cut(s) 740, 1012
BstNSI RCATGY 1 cut(s) 694
BstSCI CCNGG 2 cut(s) 738, 1010
BstSFI CTRYAG 2 cut(s) 651, 1320
BstX2I RGATCY 3 cut(s) 724, 961, 1316
BstYI RGATCY 3 cut(s) 724, 961, 1316
BsuRI GGCC 2 cut(s) 410, 1045
BtgI CCRYGG 1 cut(s) 229
BtrI CACGTC 1 cut(s) 823
BtsCI GGATG 5 cut(s) 286, 628, 999, 1060, 1156
BtsI GCAGTG 1 cut(s) 352
BtsIMutI CAGTG 7 cut(s) 274, 305, 352, 648, 675, 763, 1241
Cac8I GCNNGC 2 cut(s) 692, 771
CfoI GCGC 1 cut(s) 126
Cfr13I GGNCC 2 cut(s) 1014, 1043
CseI GACGC 1 cut(s) 560
CspCI CAANNNNNGTGG 2 cut(s) 923, 958
DdeI CTNAG 6 cut(s) 475, 513, 602, 617, 657, 1302
DpnI GATC 8 cut(s) 139, 227, 378, 645, 726, 795, 963, 1318
DpnII GATC 8 cut(s) 137, 225, 376, 643, 724, 793, 961, 1316
DraIII CACNNNGTG 1 cut(s) 542
EaeI YGGCCR 1 cut(s) 408
Eam1104I CTCTTC 2 cut(s) 765, 1253
EarI CTCTTC 2 cut(s) 765, 1253
Eco130I CCWWGG 1 cut(s) 229
Eco24I GRGCYC 1 cut(s) 760
Eco31I GGTCTC 2 cut(s) 839, 1064
Eco32I GATATC 2 cut(s) 76, 976
Eco47I GGWCC 1 cut(s) 1014
Eco57I CTGAAG 1 cut(s) 54
Eco88I CYCGRG 1 cut(s) 154
EcoRII CCWGG 2 cut(s) 738, 1010
EcoRV GATATC 2 cut(s) 76, 976
EcoT14I CCWWGG 1 cut(s) 229
EcoT38I GRGCYC 1 cut(s) 760
ErhI CCWWGG 1 cut(s) 229
FalI AAGNNNNNCTT 2 cut(s) 1250, 1282
FbaI TGATCA 1 cut(s) 376
FblI GTMKAC 1 cut(s) 877
Fnu4HI GCNGC 1 cut(s) 181
FokI GGATG 5 cut(s) 293, 635, 986, 1067, 1143
FriOI GRGCYC 1 cut(s) 760
Fsp4HI GCNGC 1 cut(s) 181
FspBI CTAG 1 cut(s) 671
FspI TGCGCA 1 cut(s) 125
GlaI GCGC 1 cut(s) 125
GluI GCNGC 1 cut(s) 181
GsuI CTGGAG 2 cut(s) 329, 927
HaeIII GGCC 2 cut(s) 410, 1045
HgaI GACGC 1 cut(s) 560
HhaI GCGC 1 cut(s) 126
Hin6I GCGC 1 cut(s) 124
HinP1I GCGC 1 cut(s) 124
HinfI GANTC 7 cut(s) 29, 191, 481, 1007, 1024, 1029, 1249
HphI GGTGA 3 cut(s) 287, 359, 397
Hpy166II GTNNAC 3 cut(s) 878, 1037, 1228
Hpy188I TCNGA 6 cut(s) 34, 110, 376, 534, 603, 700
Hpy188III TCNNGA 7 cut(s) 59, 71, 512, 906, 1066, 1099, 1152
Hpy8I GTNNAC 3 cut(s) 878, 1037, 1228
HpyAV CCTTC 4 cut(s) 185, 381, 518, 1170
HpyCH4III ACNGT 3 cut(s) 269, 652, 1245
HpyCH4IV ACGT 2 cut(s) 822, 841
HpyCH4V TGCA 9 cut(s) 15, 114, 325, 437, 451, 459, 892, 999, 1291
HpyF10VI GCNNNNNNNGC 3 cut(s) 165, 575, 775
HpyF3I CTNAG 6 cut(s) 475, 513, 602, 617, 657, 1302
HpySE526I ACGT 2 cut(s) 822, 841
HspAI GCGC 1 cut(s) 124
Ksp22I TGATCA 1 cut(s) 376
Kzo9I GATC 8 cut(s) 137, 225, 376, 643, 724, 793, 961, 1316
LguI GCTCTTC 1 cut(s) 765
LmnI GCTCC 3 cut(s) 310, 687, 1083
LweI GCATC 6 cut(s) 37, 101, 438, 565, 843, 1008
MaeI CTAG 1 cut(s) 671
MaeII ACGT 2 cut(s) 822, 841
MaeIII GTNAC 4 cut(s) 502, 523, 610, 703
MalI GATC 8 cut(s) 139, 227, 378, 645, 726, 795, 963, 1318
MboI GATC 8 cut(s) 137, 225, 376, 643, 724, 793, 961, 1316
MboII GAAGA 3 cut(s) 752, 971, 1270
MfeI CAATTG 1 cut(s) 893
MflI RGATCY 3 cut(s) 724, 961, 1316
MhlI GDGCHC 2 cut(s) 354, 760
MlsI TGGCCA 1 cut(s) 410
MluCI AATT 3 cut(s) 10, 893, 1019
MluNI TGGCCA 1 cut(s) 410
MlyI GAGTC 3 cut(s) 200, 1016, 1023
MmeI TCCRAC 2 cut(s) 665, 761
MnlI CCTC 9 cut(s) 66, 271, 352, 597, 652, 862, 1073, 1153, 1297
Mox20I TGGCCA 1 cut(s) 410
MscI TGGCCA 1 cut(s) 410
MseI TTAA 4 cut(s) 96, 104, 750, 884
MslI CAYNNNNRTG 2 cut(s) 119, 1173
Msp20I TGGCCA 1 cut(s) 410
MspA1I CMGCKG 1 cut(s) 119
MspR9I CCNGG 2 cut(s) 740, 1012
MunI CAATTG 1 cut(s) 893
Mva1269I GAATGC 1 cut(s) 398
MvaI CCWGG 2 cut(s) 740, 1012
MwoI GCNNNNNNNGC 3 cut(s) 165, 575, 775
NcoI CCATGG 1 cut(s) 229
NdeII GATC 8 cut(s) 137, 225, 376, 643, 724, 793, 961, 1316
NlaIV GGNNCC 1 cut(s) 726
NmuCI GTSAC 3 cut(s) 502, 523, 703
NsbI TGCGCA 1 cut(s) 125
NspI RCATGY 1 cut(s) 694
OliI CACNNNNGTG 1 cut(s) 119
PaeI GCATGC 1 cut(s) 694
PciSI GCTCTTC 1 cut(s) 765
PctI GAATGC 1 cut(s) 398
PfeI GAWTC 4 cut(s) 29, 481, 1024, 1249
PflFI GACNNNGTC 1 cut(s) 1032
PfoI TCCNGGA 1 cut(s) 1010
PkrI GCNGC 1 cut(s) 182
PleI GAGTC 3 cut(s) 199, 1015, 1023
PpsI GAGTC 3 cut(s) 199, 1015, 1023
Ppu21I YACGTR 1 cut(s) 842
Psp6I CCWGG 2 cut(s) 738, 1010
PspGI CCWGG 2 cut(s) 738, 1010
PspN4I GGNNCC 1 cut(s) 726
PspPI GGNCC 2 cut(s) 1014, 1043
PsuI RGATCY 3 cut(s) 724, 961, 1316
PsyI GACNNNGTC 1 cut(s) 1032
RseI CAYNNNNRTG 2 cut(s) 119, 1173
SapI GCTCTTC 1 cut(s) 765
SaqAI TTAA 4 cut(s) 96, 104, 750, 884
SatI GCNGC 1 cut(s) 181
Sau3AI GATC 8 cut(s) 137, 225, 376, 643, 724, 793, 961, 1316
Sau96I GGNCC 2 cut(s) 1014, 1043
SchI GAGTC 3 cut(s) 200, 1016, 1023
ScrFI CCNGG 2 cut(s) 740, 1012
SduI GDGCHC 2 cut(s) 354, 760
SfaNI GCATC 6 cut(s) 37, 101, 438, 565, 843, 1008
SfcI CTRYAG 2 cut(s) 651, 1320
SinI GGWCC 1 cut(s) 1014
SmiMI CAYNNNNRTG 2 cut(s) 119, 1173
SmlI CTYRAG 1 cut(s) 1066
SmoI CTYRAG 1 cut(s) 1066
SphI GCATGC 1 cut(s) 694
Sse9I AATT 3 cut(s) 10, 893, 1019
SsiI CCGC 3 cut(s) 117, 181, 873
SspI AATATT 1 cut(s) 455
SspMI CTAG 1 cut(s) 671
StyD4I CCNGG 2 cut(s) 738, 1010
StyI CCWWGG 1 cut(s) 229
TaaI ACNGT 3 cut(s) 269, 652, 1245
TaiI ACGT 2 cut(s) 825, 844
TaqI TCGA 3 cut(s) 1027, 1187, 1247
TasI AATT 3 cut(s) 10, 893, 1019
TauI GCSGC 1 cut(s) 183
TfiI GAWTC 4 cut(s) 29, 481, 1024, 1249
Tru1I TTAA 4 cut(s) 96, 104, 750, 884
Tru9I TTAA 4 cut(s) 96, 104, 750, 884
TscAI CASTG 7 cut(s) 274, 312, 359, 655, 682, 770, 1248
TseFI GTSAC 3 cut(s) 502, 523, 703
Tsp45I GTSAC 3 cut(s) 502, 523, 703
TspDTI ATGAA 7 cut(s) 71, 405, 639, 796, 1001, 1125, 1271
TspGWI ACGGA 3 cut(s) 56, 389, 1022
TspRI CASTG 7 cut(s) 274, 312, 359, 655, 682, 770, 1248
Tth111I GACNNNGTC 1 cut(s) 1032
VpaK11BI GGWCC 1 cut(s) 1014
XceI RCATGY 1 cut(s) 694
XmiI GTMKAC 1 cut(s) 877
XspI CTAG 1 cut(s) 671
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.