RchiOBHm_Chr1g0350191

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000068
Physical Location & Seq
Forward (+)
43312663 .. 43315190
2528 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57607

Sequence Viewer

Length: 1254 bp
ATGTCTGATTTCTTTCCGGAAGAAATCATAGAGAAAATCCTCTTGAGGCTGCCCATCAAATCCCTAATCAAATTCACAGCAGTTTGCAAATCATGGTCGTCACTGATCAAAACCTCTACCTTCGTTCAATCCCATCTCTGCACCACCATCGATTCCAACAACCAAAACGACGCTCACCTCCTCCTCCTCAGCGCTTACTCGCGATCGTACTCGTACCCCGCCAAAGAAAGCATCTCCAATGAGCATCACTGGTTGCGTTGGGATAGCCCTGAATTCGGTAAGTACTCCAAGCTTTCAAATCCATTCCCTTTCTTCACGTACGAAAACCAACGTCGGGATCTGCGTGTTTTCGGTACCTGTAACGGGCTCGTATGCCTGGAGAGTTTTGACCCCTGCACCAGGGATTGTTCTCCCGCTTTAATCTGGAATCCTTCTATCCGAAAGATTGTGATGTTGCCTACACCACCTGCTTGTCTTACCTCTACCGAATACCACAATTACCGAAAGTACACATCCCATGGCTTTGGCTATGATTCACATTCTAACGACTATAAGGTTTTGAGAGTTGTGAGTCTTTCTGATGATCATTCAAACTTGTCCCGATTCACCACCGTGGTTCAGGTTTACTCCTTGGCCAGGGGCTCCTGGAAGAGACTTTGTGCTTCTGTTGTTCCGGTGGATTTGCAGGCCGGTGGTTCGGAACGTCCTGATTTTGTTAATGGCTGTTTGCATATGCTTGAAATACGTTTAAGTGTGTATTACGATGACGATCACCAGGAACACCGCAAGTGTGGTGGAGACTCGTTTATTGCCTACTTTAATCTGGCCACTGAAGTATTTGGCGAGATAATGATACCGGAAGCTTTGCGGAAAGATGAGTGCTCTATTTCGAGATATGGGGAGTCCCTTGCCTTGATTAAGAATAAATGTTATAATTTGGATGATCCAGCTAATTGTGGTTGTGACATTTGGGTTATGAAAGAGTATGGTGTAGCAGAGTCATGGACTTTTTTGTACAGTATAGTTATGGTTCAAGCTACTATATTTGGTTTTAAAAGGTGTGGGGAAGTTGTGCTAGAGGAGACGAATGTCTTAAGACTAAGAAGAATGCTTTCGCTGGATCCTAAAAGCGGACAAGTTAAAGTTTTTGGAACCGAGTATTGTACTTACTATTTCATGGATTCTTTTGTAGAGAGTATCGTCTTGCTTGATCACGCGAAAGCCATATCTTACCAAGGAGAAATAAAAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

417

Amino Acids

47.78

Weight (kDa)

6.19

Isoelectric Point (pI)

47.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 5 - 41 1.1e-08 F-box domain
FBA_3 PF08268 108 - 384 2.6e-16 F-box associated beta propeller domain
FBA_1 PF07734 117 - 362 5.7e-17 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 933
AarI CACCTGC 1 cut(s) 475
Acc36I ACCTGC 1 cut(s) 475
Acc65I GGTACC 1 cut(s) 353
AccB1I GGYRCC 1 cut(s) 353
AccII CGCG 2 cut(s) 202, 1217
AccIII TCCGGA 1 cut(s) 16
AciI CCGC 5 cut(s) 219, 414, 784, 868, 1131
AclWI GGATC 4 cut(s) 345, 938, 1115, 1128
AcoI YGGCCR 2 cut(s) 633, 825
AcsI RAATTY 3 cut(s) 71, 272, 1248
AcuI CTGAAG 1 cut(s) 852
AfaI GTAC 8 cut(s) 209, 215, 284, 320, 355, 509, 1016, 1165
AfeI AGCGCT 1 cut(s) 193
AfiI CCNNNNNNNGG 6 cut(s) 275, 334, 363, 399, 636, 1130
AflII CTTAAG 1 cut(s) 1093
AgsI TTSAA 5 cut(s) 128, 297, 591, 740, 1034
AjnI CCWGG 5 cut(s) 375, 398, 635, 644, 774
AleI CACNNNNGTG 1 cut(s) 611
AluBI AGCT 4 cut(s) 292, 863, 950, 1037
AluI AGCT 4 cut(s) 292, 863, 950, 1037
Alw21I GWGCWC 1 cut(s) 884
Alw26I GTCTC 3 cut(s) 646, 792, 1076
AlwI GGATC 4 cut(s) 345, 938, 1115, 1128
Aor13HI TCCGGA 1 cut(s) 16
Aor51HI AGCGCT 1 cut(s) 193
AoxI GGCC 3 cut(s) 633, 687, 825
ApeKI GCWGC 1 cut(s) 49
ApoI RAATTY 3 cut(s) 71, 272, 1248
Asp700I GAANNNNTTC 1 cut(s) 1111
Asp718I GGTACC 1 cut(s) 353
AspLEI GCGC 1 cut(s) 194
AsuHPI GGTGA 3 cut(s) 167, 598, 764
BalI TGGCCA 2 cut(s) 635, 827
BamHI GGATCC 1 cut(s) 1120
BanI GGYRCC 1 cut(s) 353
BanII GRGCYC 2 cut(s) 369, 644
Bbv12I GWGCWC 1 cut(s) 884
BbvCI CCTCAGC 1 cut(s) 188
BbvI GCAGC 1 cut(s) 36
BccI CCATC 3 cut(s) 62, 141, 155
BcgI CGANNNNNNTGC 2 cut(s) 130, 164
BciT130I CCWGG 5 cut(s) 377, 400, 637, 646, 776
BclI TGATCA 3 cut(s) 105, 583, 1210
BcoDI GTCTC 3 cut(s) 646, 792, 1076
BfaI CTAG 1 cut(s) 1076
BfoI RGCGCY 1 cut(s) 195
BfrI CTTAAG 1 cut(s) 1093
BfuAI ACCTGC 1 cut(s) 475
BisI GCNGC 1 cut(s) 50
BlsI GCNGC 1 cut(s) 51
BmcAI AGTACT 1 cut(s) 284
Bme1390I CCNGG 5 cut(s) 377, 400, 637, 646, 776
BmiI GGNNCC 4 cut(s) 355, 643, 1122, 1153
BmrFI CCNGG 5 cut(s) 377, 400, 637, 646, 776
BmsI GCATC 2 cut(s) 240, 253
BoxI GACNNNNGTC 1 cut(s) 1088
BpmI CTGGAG 1 cut(s) 398
Bpu10I CCTNAGC 1 cut(s) 188
BpuEI CTTGAG 1 cut(s) 64
Bsa29I ATCGAT 1 cut(s) 150
BsaAI YACGTR 1 cut(s) 318
BsaBI GATNNNNATC 1 cut(s) 768
BsaJI CCNNGG 6 cut(s) 399, 517, 612, 630, 636, 1234
BsaWI WCCGGW 3 cut(s) 16, 673, 856
Bsc4I CCNNNNNNNGG 6 cut(s) 275, 334, 363, 399, 636, 1130
Bse118I RCCGGY 1 cut(s) 689
Bse1I ACTGG 1 cut(s) 254
Bse8I GATNNNNATC 1 cut(s) 768
BseAI TCCGGA 1 cut(s) 16
BseBI CCWGG 5 cut(s) 377, 400, 637, 646, 776
BseCI ATCGAT 1 cut(s) 150
BseDI CCNNGG 6 cut(s) 399, 517, 612, 630, 636, 1234
BseGI GGATG 2 cut(s) 512, 946
BseJI GATNNNNATC 1 cut(s) 768
BseLI CCNNNNNNNGG 6 cut(s) 275, 334, 363, 399, 636, 1130
BseMII CTCAG 1 cut(s) 202
BseNI ACTGG 1 cut(s) 254
BseRI GAGGAG 4 cut(s) 170, 173, 176, 1094
BseXI GCAGC 1 cut(s) 36
BsgI GTGCAG 2 cut(s) 124, 379
Bsh1236I CGCG 2 cut(s) 202, 1217
Bsh1285I CGRYCG 1 cut(s) 206
BshFI GGCC 3 cut(s) 635, 689, 827
BshNI GGYRCC 1 cut(s) 353
BshVI ATCGAT 1 cut(s) 150
BsiEI CGRYCG 1 cut(s) 206
BsiHKAI GWGCWC 1 cut(s) 884
BsiSI CCGG 4 cut(s) 17, 674, 690, 857
BsiWI CGTACG 1 cut(s) 318
BslFI GGGAC 2 cut(s) 583, 889
BslI CCNNNNNNNGG 6 cut(s) 275, 334, 363, 399, 636, 1130
BsmAI GTCTC 3 cut(s) 646, 792, 1076
BsmBI CGTCTC 1 cut(s) 1076
BsmFI GGGAC 2 cut(s) 583, 889
BsmI GAATGC 1 cut(s) 1113
BsnI GGCC 3 cut(s) 635, 689, 827
Bsp1286I GDGCHC 3 cut(s) 369, 644, 884
Bsp13I TCCGGA 1 cut(s) 16
Bsp1407I TGTACA 1 cut(s) 1014
Bsp143I GATC 8 cut(s) 105, 203, 337, 583, 769, 943, 1120, 1210
Bsp19I CCATGG 1 cut(s) 517
Bsp68I TCGCGA 1 cut(s) 202
BspACI CCGC 5 cut(s) 219, 414, 784, 868, 1131
BspANI GGCC 3 cut(s) 635, 689, 827
BspCNI CTCAG 1 cut(s) 201
BspDI ATCGAT 1 cut(s) 150
BspEI TCCGGA 1 cut(s) 16
BspFNI CGCG 2 cut(s) 202, 1217
BspLI GGNNCC 4 cut(s) 355, 643, 1122, 1153
BspMI ACCTGC 1 cut(s) 475
BspPI GGATC 4 cut(s) 345, 938, 1115, 1128
BspT107I GGYRCC 1 cut(s) 353
BspTI CTTAAG 1 cut(s) 1093
BsrFI RCCGGY 1 cut(s) 689
BsrGI TGTACA 1 cut(s) 1014
BsrI ACTGG 1 cut(s) 254
BssAI RCCGGY 1 cut(s) 689
BssECI CCNNGG 6 cut(s) 399, 517, 612, 630, 636, 1234
BssMI GATC 8 cut(s) 105, 203, 337, 583, 769, 943, 1120, 1210
BssT1I CCWWGG 3 cut(s) 517, 630, 1234
Bst2UI CCWGG 5 cut(s) 377, 400, 637, 646, 776
Bst4CI ACNGT 2 cut(s) 613, 1019
Bst6I CTCTTC 1 cut(s) 644
BstAFI CTTAAG 1 cut(s) 1093
BstAUI TGTACA 1 cut(s) 1014
BstBAI YACGTR 1 cut(s) 318
BstC8I GCNNGC 1 cut(s) 687
BstDEI CTNAG 2 cut(s) 188, 1100
BstDSI CCRYGG 2 cut(s) 517, 612
BstENI CCTNNNNNAGG 2 cut(s) 397, 634
BstF5I GGATG 2 cut(s) 512, 946
BstFNI CGCG 2 cut(s) 202, 1217
BstH2I RGCGCY 1 cut(s) 195
BstHHI GCGC 1 cut(s) 194
BstKTI GATC 8 cut(s) 108, 206, 340, 586, 772, 946, 1123, 1213
BstMAI GTCTC 3 cut(s) 646, 792, 1076
BstMBI GATC 8 cut(s) 105, 203, 337, 583, 769, 943, 1120, 1210
BstMCI CGRYCG 1 cut(s) 206
BstNI CCWGG 5 cut(s) 377, 400, 637, 646, 776
BstPAI GACNNNNGTC 1 cut(s) 1088
BstSCI CCNGG 5 cut(s) 375, 398, 635, 644, 774
BstUI CGCG 2 cut(s) 202, 1217
BstV1I GCAGC 1 cut(s) 36
BstX2I RGATCY 2 cut(s) 337, 1120
BstXI CCANNNNNNTGG 1 cut(s) 524
BstYI RGATCY 2 cut(s) 337, 1120
Bsu15I ATCGAT 1 cut(s) 150
BsuRI GGCC 3 cut(s) 635, 689, 827
BsuTUI ATCGAT 1 cut(s) 150
BtgI CCRYGG 2 cut(s) 517, 612
BtsCI GGATG 2 cut(s) 512, 946
BtsIMutI CAGTG 3 cut(s) 101, 247, 828
BtuMI TCGCGA 1 cut(s) 202
BveI ACCTGC 1 cut(s) 475
Cac8I GCNNGC 1 cut(s) 687
CfoI GCGC 1 cut(s) 194
Cfr10I RCCGGY 1 cut(s) 689
ClaI ATCGAT 1 cut(s) 150
CseI GACGC 1 cut(s) 179
Csp6I GTAC 8 cut(s) 208, 214, 283, 319, 354, 508, 1015, 1164
CspCI CAANNNNNGTGG 2 cut(s) 775, 810
CviAII CATG 4 cut(s) 93, 518, 1002, 1177
CviQI GTAC 8 cut(s) 208, 214, 283, 319, 354, 508, 1015, 1164
DdeI CTNAG 2 cut(s) 188, 1100
DpnI GATC 8 cut(s) 107, 205, 339, 585, 771, 945, 1122, 1212
DpnII GATC 8 cut(s) 105, 203, 337, 583, 769, 943, 1120, 1210
DraI TTTAAA 1 cut(s) 1054
EaeI YGGCCR 2 cut(s) 633, 825
Eam1104I CTCTTC 1 cut(s) 644
EarI CTCTTC 1 cut(s) 644
Eco130I CCWWGG 3 cut(s) 517, 630, 1234
Eco24I GRGCYC 2 cut(s) 369, 644
Eco47III AGCGCT 1 cut(s) 193
Eco57I CTGAAG 1 cut(s) 852
EcoNI CCTNNNNNAGG 2 cut(s) 397, 634
EcoRI GAATTC 1 cut(s) 272
EcoRII CCWGG 5 cut(s) 375, 398, 635, 644, 774
EcoT14I CCWWGG 3 cut(s) 517, 630, 1234
EcoT38I GRGCYC 2 cut(s) 369, 644
ErhI CCWWGG 3 cut(s) 517, 630, 1234
Esp3I CGTCTC 1 cut(s) 1076
FaeI CATG 4 cut(s) 96, 521, 1005, 1180
FaqI GGGAC 2 cut(s) 583, 889
FatI CATG 4 cut(s) 92, 517, 1001, 1176
FauI CCCGC 2 cut(s) 226, 421
FauNDI CATATG 1 cut(s) 732
FbaI TGATCA 3 cut(s) 105, 583, 1210
Fnu4HI GCNGC 1 cut(s) 50
FokI GGATG 2 cut(s) 499, 953
FriOI GRGCYC 2 cut(s) 369, 644
Fsp4HI GCNGC 1 cut(s) 50
FspBI CTAG 1 cut(s) 1076
GlaI GCGC 1 cut(s) 193
GluI GCNGC 1 cut(s) 50
GsuI CTGGAG 1 cut(s) 398
HaeII RGCGCY 1 cut(s) 195
HaeIII GGCC 3 cut(s) 635, 689, 827
HapII CCGG 4 cut(s) 17, 674, 690, 857
HgaI GACGC 1 cut(s) 179
HhaI GCGC 1 cut(s) 194
Hin1II CATG 4 cut(s) 96, 521, 1005, 1180
Hin6I GCGC 1 cut(s) 192
HinP1I GCGC 1 cut(s) 192
HindIII AAGCTT 2 cut(s) 290, 861
HinfI GANTC 9 cut(s) 152, 427, 533, 571, 603, 800, 902, 998, 1181
HpaII CCGG 4 cut(s) 17, 674, 690, 857
HphI GGTGA 3 cut(s) 167, 598, 764
Hpy166II GTNNAC 2 cut(s) 510, 625
Hpy188I TCNGA 4 cut(s) 7, 440, 580, 700
Hpy188III TCNNGA 8 cut(s) 17, 43, 201, 335, 424, 600, 707, 891
Hpy8I GTNNAC 2 cut(s) 510, 625
Hpy99I CGWCG 2 cut(s) 173, 336
HpyAV CCTTC 2 cut(s) 130, 441
HpyCH4III ACNGT 2 cut(s) 613, 1019
HpyCH4IV ACGT 4 cut(s) 317, 331, 703, 745
HpyCH4V TGCA 5 cut(s) 87, 141, 396, 685, 730
HpyF3I CTNAG 2 cut(s) 188, 1100
HpySE526I ACGT 4 cut(s) 317, 331, 703, 745
Hsp92II CATG 4 cut(s) 96, 521, 1005, 1180
HspAI GCGC 1 cut(s) 192
Kpn2I TCCGGA 1 cut(s) 16
KpnI GGTACC 1 cut(s) 357
Ksp22I TGATCA 3 cut(s) 105, 583, 1210
Kzo9I GATC 8 cut(s) 105, 203, 337, 583, 769, 943, 1120, 1210
LmnI GCTCC 1 cut(s) 647
Lsp1109I GCAGC 1 cut(s) 36
LweI GCATC 2 cut(s) 240, 253
MaeI CTAG 1 cut(s) 1076
MaeII ACGT 4 cut(s) 317, 331, 703, 745
MaeIII GTNAC 3 cut(s) 99, 359, 962
MalI GATC 8 cut(s) 107, 205, 339, 585, 771, 945, 1122, 1212
MboI GATC 8 cut(s) 105, 203, 337, 583, 769, 943, 1120, 1210
MboII GAAGA 4 cut(s) 32, 304, 661, 1116
MflI RGATCY 2 cut(s) 337, 1120
MhlI GDGCHC 3 cut(s) 369, 644, 884
MlsI TGGCCA 2 cut(s) 635, 827
MluCI AATT 6 cut(s) 71, 272, 496, 934, 952, 1248
MluNI TGGCCA 2 cut(s) 635, 827
MlyI GAGTC 4 cut(s) 580, 794, 911, 1007
MmeI TCCRAC 1 cut(s) 180
MnlI CCTC 9 cut(s) 39, 50, 124, 188, 191, 194, 197, 490, 1072
Mox20I TGGCCA 2 cut(s) 635, 827
MroI TCCGGA 1 cut(s) 16
MroXI GAANNNNTTC 1 cut(s) 1111
MscI TGGCCA 2 cut(s) 635, 827
MseI TTAA 9 cut(s) 419, 717, 749, 819, 918, 1053, 1094, 1140, 1252
MslI CAYNNNNRTG 1 cut(s) 611
Msp20I TGGCCA 2 cut(s) 635, 827
MspCI CTTAAG 1 cut(s) 1093
MspI CCGG 4 cut(s) 17, 674, 690, 857
MspR9I CCNGG 5 cut(s) 377, 400, 637, 646, 776
Mva1269I GAATGC 1 cut(s) 1113
MvaI CCWGG 5 cut(s) 377, 400, 637, 646, 776
MvnI CGCG 2 cut(s) 202, 1217
NcoI CCATGG 1 cut(s) 517
NdeI CATATG 1 cut(s) 732
NdeII GATC 8 cut(s) 105, 203, 337, 583, 769, 943, 1120, 1210
NlaIII CATG 4 cut(s) 96, 521, 1005, 1180
NlaIV GGNNCC 4 cut(s) 355, 643, 1122, 1153
NmuCI GTSAC 2 cut(s) 99, 962
NruI TCGCGA 1 cut(s) 202
OliI CACNNNNGTG 1 cut(s) 611
PaqCI CACCTGC 1 cut(s) 475
PcsI WCGNNNNNNNCGW 1 cut(s) 340
PctI GAATGC 1 cut(s) 1113
PdmI GAANNNNTTC 1 cut(s) 1111
PfeI GAWTC 5 cut(s) 152, 427, 533, 603, 1181
Pfl23II CGTACG 1 cut(s) 318
PfoI TCCNGGA 1 cut(s) 644
PkrI GCNGC 1 cut(s) 51
Ple19I CGATCG 1 cut(s) 206
PleI GAGTC 4 cut(s) 579, 794, 910, 1006
PpsI GAGTC 4 cut(s) 579, 794, 910, 1006
Ppu21I YACGTR 1 cut(s) 318
PshAI GACNNNNGTC 1 cut(s) 1088
PsiI TTATAA 1 cut(s) 933
Psp6I CCWGG 5 cut(s) 375, 398, 635, 644, 774
PspGI CCWGG 5 cut(s) 375, 398, 635, 644, 774
PspLI CGTACG 1 cut(s) 318
PspN4I GGNNCC 4 cut(s) 355, 643, 1122, 1153
PsuI RGATCY 2 cut(s) 337, 1120
PvuI CGATCG 1 cut(s) 206
RruI TCGCGA 1 cut(s) 202
RsaI GTAC 8 cut(s) 209, 215, 284, 320, 355, 509, 1016, 1165
RsaNI GTAC 8 cut(s) 208, 214, 283, 319, 354, 508, 1015, 1164
RseI CAYNNNNRTG 1 cut(s) 611
SaqAI TTAA 9 cut(s) 419, 717, 749, 819, 918, 1053, 1094, 1140, 1252
SatI GCNGC 1 cut(s) 50
Sau3AI GATC 8 cut(s) 105, 203, 337, 583, 769, 943, 1120, 1210
ScaI AGTACT 1 cut(s) 284
SchI GAGTC 4 cut(s) 580, 794, 911, 1007
ScrFI CCNGG 5 cut(s) 377, 400, 637, 646, 776
SduI GDGCHC 3 cut(s) 369, 644, 884
SfaNI GCATC 2 cut(s) 240, 253
SmiMI CAYNNNNRTG 1 cut(s) 611
SmlI CTYRAG 2 cut(s) 43, 1093
SmoI CTYRAG 2 cut(s) 43, 1093
Sse9I AATT 6 cut(s) 71, 272, 496, 934, 952, 1248
SsiI CCGC 5 cut(s) 219, 414, 784, 868, 1131
SspMI CTAG 1 cut(s) 1076
StyD4I CCNGG 5 cut(s) 375, 398, 635, 644, 774
StyI CCWWGG 3 cut(s) 517, 630, 1234
TaaI ACNGT 2 cut(s) 613, 1019
TaiI ACGT 4 cut(s) 320, 334, 706, 748
TaqI TCGA 2 cut(s) 150, 890
TasI AATT 6 cut(s) 71, 272, 496, 934, 952, 1248
TatI WGTACW 4 cut(s) 282, 507, 1014, 1163
TfiI GAWTC 5 cut(s) 152, 427, 533, 603, 1181
Tru1I TTAA 9 cut(s) 419, 717, 749, 819, 918, 1053, 1094, 1140, 1252
Tru9I TTAA 9 cut(s) 419, 717, 749, 819, 918, 1053, 1094, 1140, 1252
TscAI CASTG 3 cut(s) 108, 254, 835
TseFI GTSAC 2 cut(s) 99, 962
TseI GCWGC 1 cut(s) 49
Tsp45I GTSAC 2 cut(s) 99, 962
TspDTI ATGAA 2 cut(s) 992, 1165
TspRI CASTG 3 cut(s) 108, 254, 835
Vha464I CTTAAG 1 cut(s) 1093
XagI CCTNNNNNAGG 2 cut(s) 397, 634
XapI RAATTY 3 cut(s) 71, 272, 1248
XmnI GAANNNNTTC 1 cut(s) 1111
XspI CTAG 1 cut(s) 1076
ZrmI AGTACT 1 cut(s) 284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.