RchiOBHm_Chr5g0031751

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000068
Physical Location & Seq
Forward (+)
25463026 .. 25464574
1549 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31096

Sequence Viewer

Length: 1236 bp
ATGAATGACCATAAAATTGCTGCAATTGAATTGAAATCTGAGGCAGGATTGGATTATTTCCCTCAAGAAATCATCTCCAATATCCTAATTAGATTACCTATTAAGTCTTTGATCAAATGCACCTCTGTCTGCAAGTCTTGGAAATCTTTGATCCAAAACCCTAGCTTTATTGATACACATCTTAGCCACAGAGTCAGTTGTAATAACCAGAATGGCACTCACCTTCTTCTAGTCCACAGTGTTTGTAGTAAAAGATTTTGCAGCTTATTCGACAGAGATTTCGTTAGAGGTGAAAAGGAAGACCTTTACGCTTTGTACTATGATAACCATGGATTTGATGAGTACTGCAAGATTGAATTGCCTAGTGATCTTGAGGAAATTATGCTCAGTTCGTGTTTCCGTGTGGTCGGTACTTGTAATGGATTAGTATGCATTGTGGATGAATTAGGGTGTCATGGTTGCAATTTGATCATATGGAATCCTTGTGTAAGAAAGTTTGTAAAACTTCCTCAACCTGCTGTGCTGCACGGTGGGTGTGAAGCGTCTGTTGGCTTTGGTTATGATGCCACAAGCAATGACTACAAGGTTGTGAGACTTGTCACACTTTCGGATCAATATCAGAATTTCCATGAGTGGCCAACTCTATTTCAGGTTTATTCACTAGCCACGGGCTTGTGGAGCAGGCTTCGTTCTGATCTTCCTCCGTGTCAAATGTTTTGCTCCCCAGCCCAGGCTTTTGTGAATGGGGCACTTCACTGGTCTGCAATCCGCCGGACAAATGATGCTTTCAACTATTTTGTTCTGGCTTTTGATGTGGGCAGTGAGTTGTTTCGAGAGATAATGTTTCCAAAGAGTCTGAAATGGGATCCGTCGTTGGCTTTGCGAATATCTGTTGCTGGAGATCGAAAATCCATCTCTATCTTCACTGATTGGCGAAAGAGTCATTCCAATTATTTTCTTGATATATGGGTACTGAAAGAGTACTGCATTGAGAATTCGTGGACCAAATTGATGATTCTCAGTGCAGAAGTTCCACAAAGAAATTTACCCAAGGCATTGTGTTTCAGGAAGATAGGTGAAGTTTTGGTGCTTGAAGACAGCTACGAACTAGTTTCACTTGACATTATGAGCAGAAAAGTTAAAACTCTTGGGGTTTATGGAGGTCAGTATTGCTCTGTTGATTCTTATGAAGAGAGCCTTGTATTACTTGACAGGAAATATGGTGTTTCTTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

411

Amino Acids

46.98

Weight (kDa)

6.42

Isoelectric Point (pI)

33.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 20 - 56 3.7e-09 F-box domain
F-box-like PF12937 21 - 55 1.4e-07 F-box-like
FBA_3 PF08268 131 - 343 6.9e-18 F-box associated beta propeller domain
FBA_1 PF07734 133 - 351 1.1e-25 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 135 - 350 4.6e-11 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 523
AciI CCGC 1 cut(s) 769
AclWI GGATC 4 cut(s) 145, 618, 860, 873
AcoI YGGCCR 1 cut(s) 635
AcsI RAATTY 3 cut(s) 622, 994, 1042
AfaI GTAC 5 cut(s) 317, 344, 412, 972, 983
AfiI CCNNNNNNNGG 1 cut(s) 730
AgsI TTSAA 5 cut(s) 29, 34, 356, 790, 1094
AhlI ACTAGT 1 cut(s) 1108
AjnI CCWGG 1 cut(s) 729
AjuI GAANNNNNNNTTGG 2 cut(s) 531, 563
AluBI AGCT 3 cut(s) 165, 264, 1101
AluI AGCT 3 cut(s) 165, 264, 1101
Alw26I GTCTC 1 cut(s) 586
AlwI GGATC 4 cut(s) 145, 618, 860, 873
AoxI GGCC 1 cut(s) 635
ApeKI GCWGC 3 cut(s) 20, 261, 523
ApoI RAATTY 3 cut(s) 622, 994, 1042
ArsI GACNNNNNNTTYG 2 cut(s) 263, 295
AspS9I GGNCC 1 cut(s) 1002
AsuHPI GGTGA 3 cut(s) 212, 302, 1088
AvaII GGWCC 1 cut(s) 1002
BaeGI GKGCMC 1 cut(s) 751
BalI TGGCCA 1 cut(s) 637
BamHI GGATCC 1 cut(s) 865
BbsI GAAGAC 2 cut(s) 306, 1101
BbvI GCAGC 3 cut(s) 7, 273, 510
BccI CCATC 1 cut(s) 920
BcgI CGANNNNNNTGC 2 cut(s) 250, 284
BciT130I CCWGG 1 cut(s) 731
BclI TGATCA 2 cut(s) 111, 468
BcoDI GTCTC 1 cut(s) 586
BcuI ACTAGT 1 cut(s) 1108
BfaI CTAG 5 cut(s) 162, 230, 363, 662, 1109
BfuAI ACCTGC 1 cut(s) 523
BisI GCNGC 3 cut(s) 21, 262, 524
BlsI GCNGC 3 cut(s) 22, 263, 525
BmcAI AGTACT 2 cut(s) 344, 983
Bme1390I CCNGG 1 cut(s) 731
Bme18I GGWCC 1 cut(s) 1002
BmgT120I GGNCC 1 cut(s) 1002
BmiI GGNNCC 1 cut(s) 867
BmrFI CCNGG 1 cut(s) 731
BmsI GCATC 2 cut(s) 553, 772
BpiI GAAGAC 2 cut(s) 306, 1101
BpmI CTGGAG 1 cut(s) 918
BpuEI CTTGAG 2 cut(s) 48, 392
BsaBI GATNNNNATC 2 cut(s) 177, 615
BsaJI CCNNGG 4 cut(s) 328, 666, 729, 1050
Bsc4I CCNNNNNNNGG 1 cut(s) 730
Bse1I ACTGG 1 cut(s) 761
Bse3DI GCAATG 1 cut(s) 580
Bse8I GATNNNNATC 2 cut(s) 177, 615
BseBI CCWGG 1 cut(s) 731
BseDI CCNNGG 4 cut(s) 328, 666, 729, 1050
BseGI GGATG 1 cut(s) 445
BseJI GATNNNNATC 2 cut(s) 177, 615
BseLI CCNNNNNNNGG 1 cut(s) 730
BseMI GCAATG 1 cut(s) 580
BseMII CTCAG 3 cut(s) 30, 400, 1033
BseNI ACTGG 1 cut(s) 761
BseSI GKGCMC 1 cut(s) 751
BseXI GCAGC 3 cut(s) 7, 273, 510
BseYI CCCAGC 1 cut(s) 724
BsgI GTGCAG 2 cut(s) 509, 1044
BshFI GGCC 1 cut(s) 637
BsiSI CCGG 1 cut(s) 772
BslI CCNNNNNNNGG 1 cut(s) 730
BsmAI GTCTC 1 cut(s) 586
BsnI GGCC 1 cut(s) 637
Bsp1286I GDGCHC 1 cut(s) 751
Bsp143I GATC 8 cut(s) 111, 150, 367, 468, 610, 694, 865, 901
Bsp19I CCATGG 1 cut(s) 328
BspACI CCGC 1 cut(s) 769
BspANI GGCC 1 cut(s) 637
BspCNI CTCAG 3 cut(s) 31, 399, 1032
BspLI GGNNCC 1 cut(s) 867
BspMI ACCTGC 1 cut(s) 523
BspPI GGATC 4 cut(s) 145, 618, 860, 873
BsrDI GCAATG 1 cut(s) 580
BsrI ACTGG 1 cut(s) 761
BssECI CCNNGG 4 cut(s) 328, 666, 729, 1050
BssMI GATC 8 cut(s) 111, 150, 367, 468, 610, 694, 865, 901
BssT1I CCWWGG 2 cut(s) 328, 1050
Bst2UI CCWGG 1 cut(s) 731
Bst4CI ACNGT 2 cut(s) 239, 530
Bst6I CTCTTC 1 cut(s) 1185
BstC8I GCNNGC 1 cut(s) 683
BstDEI CTNAG 4 cut(s) 39, 182, 386, 1019
BstDSI CCRYGG 2 cut(s) 328, 666
BstF5I GGATG 1 cut(s) 445
BstKTI GATC 8 cut(s) 114, 153, 370, 471, 613, 697, 868, 904
BstMAI GTCTC 1 cut(s) 586
BstMBI GATC 8 cut(s) 111, 150, 367, 468, 610, 694, 865, 901
BstMWI GCNNNNNNNGC 1 cut(s) 678
BstNI CCWGG 1 cut(s) 731
BstSCI CCNGG 1 cut(s) 729
BstSLI GKGCMC 1 cut(s) 751
BstV1I GCAGC 3 cut(s) 7, 273, 510
BstV2I GAAGAC 2 cut(s) 306, 1101
BstX2I RGATCY 1 cut(s) 865
BstYI RGATCY 1 cut(s) 865
BsuRI GGCC 1 cut(s) 637
BtgI CCRYGG 2 cut(s) 328, 666
BtsCI GGATG 1 cut(s) 445
BtsI GCAGTG 1 cut(s) 826
BtsIMutI CAGTG 5 cut(s) 244, 754, 826, 924, 1027
BveI ACCTGC 1 cut(s) 523
Cac8I GCNNGC 1 cut(s) 683
Cfr13I GGNCC 1 cut(s) 1002
CseI GACGC 1 cut(s) 531
Csp6I GTAC 5 cut(s) 316, 343, 411, 971, 982
CspCI CAANNNNNGTGG 2 cut(s) 224, 259
CviAII CATG 3 cut(s) 329, 455, 629
CviQI GTAC 5 cut(s) 316, 343, 411, 971, 982
DdeI CTNAG 4 cut(s) 39, 182, 386, 1019
DpnI GATC 8 cut(s) 113, 152, 369, 470, 612, 696, 867, 903
DpnII GATC 8 cut(s) 111, 150, 367, 468, 610, 694, 865, 901
EaeI YGGCCR 1 cut(s) 635
Eam1104I CTCTTC 1 cut(s) 1185
EarI CTCTTC 1 cut(s) 1185
EciI GGCGGA 1 cut(s) 758
Eco130I CCWWGG 2 cut(s) 328, 1050
Eco47I GGWCC 1 cut(s) 1002
EcoRI GAATTC 1 cut(s) 994
EcoRII CCWGG 1 cut(s) 729
EcoT14I CCWWGG 2 cut(s) 328, 1050
EcoT22I ATGCAT 1 cut(s) 434
ErhI CCWWGG 2 cut(s) 328, 1050
FaeI CATG 3 cut(s) 332, 458, 632
FalI AAGNNNNNCTT 2 cut(s) 1182, 1214
FatI CATG 3 cut(s) 328, 454, 628
FauNDI CATATG 1 cut(s) 473
FbaI TGATCA 2 cut(s) 111, 468
Fnu4HI GCNGC 3 cut(s) 21, 262, 524
FokI GGATG 1 cut(s) 452
Fsp4HI GCNGC 3 cut(s) 21, 262, 524
FspBI CTAG 5 cut(s) 162, 230, 363, 662, 1109
GluI GCNGC 3 cut(s) 21, 262, 524
GsaI CCCAGC 1 cut(s) 728
GsuI CTGGAG 1 cut(s) 918
HaeIII GGCC 1 cut(s) 637
HapII CCGG 1 cut(s) 772
HgaI GACGC 1 cut(s) 531
Hin1II CATG 3 cut(s) 332, 458, 632
HinfI GANTC 6 cut(s) 192, 478, 853, 940, 1015, 1181
HpaII CCGG 1 cut(s) 772
HphI GGTGA 3 cut(s) 212, 302, 1088
Hpy166II GTNNAC 2 cut(s) 235, 1002
Hpy188I TCNGA 5 cut(s) 40, 610, 621, 694, 858
Hpy188III TCNNGA 5 cut(s) 65, 371, 833, 959, 1066
Hpy8I GTNNAC 2 cut(s) 235, 1002
Hpy99I CGWCG 1 cut(s) 874
HpyAV CCTTC 1 cut(s) 233
HpyCH4III ACNGT 2 cut(s) 239, 530
HpyF10VI GCNNNNNNNGC 1 cut(s) 678
HpyF3I CTNAG 4 cut(s) 39, 182, 386, 1019
Hsp92II CATG 3 cut(s) 332, 458, 632
Ksp22I TGATCA 2 cut(s) 111, 468
Kzo9I GATC 8 cut(s) 111, 150, 367, 468, 610, 694, 865, 901
LmnI GCTCC 2 cut(s) 678, 725
Lsp1109I GCAGC 3 cut(s) 7, 273, 510
LweI GCATC 2 cut(s) 553, 772
MaeI CTAG 5 cut(s) 162, 230, 363, 662, 1109
MaeIII GTNAC 1 cut(s) 598
MalI GATC 8 cut(s) 113, 152, 369, 470, 612, 696, 867, 903
MboI GATC 8 cut(s) 111, 150, 367, 468, 610, 694, 865, 901
MboII GAAGA 7 cut(s) 218, 311, 689, 913, 1081, 1106, 1202
MfeI CAATTG 1 cut(s) 24
MflI RGATCY 1 cut(s) 865
MhlI GDGCHC 1 cut(s) 751
MlsI TGGCCA 1 cut(s) 637
MluNI TGGCCA 1 cut(s) 637
MlyI GAGTC 3 cut(s) 201, 862, 949
MnlI CCTC 8 cut(s) 34, 72, 133, 281, 367, 519, 711, 1154
Mox20I TGGCCA 1 cut(s) 637
Mph1103I ATGCAT 1 cut(s) 434
MscI TGGCCA 1 cut(s) 637
MseI TTAA 2 cut(s) 102, 1140
Msp20I TGGCCA 1 cut(s) 637
MspI CCGG 1 cut(s) 772
MspR9I CCNGG 1 cut(s) 731
MunI CAATTG 1 cut(s) 24
MvaI CCWGG 1 cut(s) 731
MwoI GCNNNNNNNGC 1 cut(s) 678
NcoI CCATGG 1 cut(s) 328
NdeI CATATG 1 cut(s) 473
NdeII GATC 8 cut(s) 111, 150, 367, 468, 610, 694, 865, 901
NlaIII CATG 3 cut(s) 332, 458, 632
NlaIV GGNNCC 1 cut(s) 867
NmuCI GTSAC 1 cut(s) 598
NsiI ATGCAT 1 cut(s) 434
PfeI GAWTC 3 cut(s) 478, 1015, 1181
PkrI GCNGC 3 cut(s) 22, 263, 525
PleI GAGTC 3 cut(s) 200, 861, 948
PpsI GAGTC 3 cut(s) 200, 861, 948
Psp6I CCWGG 1 cut(s) 729
PspFI CCCAGC 1 cut(s) 724
PspGI CCWGG 1 cut(s) 729
PspN4I GGNNCC 1 cut(s) 867
PspPI GGNCC 1 cut(s) 1002
PsuI RGATCY 1 cut(s) 865
RsaI GTAC 5 cut(s) 317, 344, 412, 972, 983
RsaNI GTAC 5 cut(s) 316, 343, 411, 971, 982
SaqAI TTAA 2 cut(s) 102, 1140
SatI GCNGC 3 cut(s) 21, 262, 524
Sau3AI GATC 8 cut(s) 111, 150, 367, 468, 610, 694, 865, 901
Sau96I GGNCC 1 cut(s) 1002
ScaI AGTACT 2 cut(s) 344, 983
SchI GAGTC 3 cut(s) 201, 862, 949
ScrFI CCNGG 1 cut(s) 731
SduI GDGCHC 1 cut(s) 751
SfaNI GCATC 2 cut(s) 553, 772
SinI GGWCC 1 cut(s) 1002
SmlI CTYRAG 2 cut(s) 63, 371
SmoI CTYRAG 2 cut(s) 63, 371
SpeI ACTAGT 1 cut(s) 1108
SsiI CCGC 1 cut(s) 769
SspMI CTAG 5 cut(s) 162, 230, 363, 662, 1109
StyD4I CCNGG 1 cut(s) 729
StyI CCWWGG 2 cut(s) 328, 1050
TaaI ACNGT 2 cut(s) 239, 530
TaqI TCGA 3 cut(s) 270, 832, 904
TatI WGTACW 3 cut(s) 315, 342, 981
TfiI GAWTC 3 cut(s) 478, 1015, 1181
Tru1I TTAA 2 cut(s) 102, 1140
Tru9I TTAA 2 cut(s) 102, 1140
TscAI CASTG 5 cut(s) 244, 761, 826, 931, 1027
TseFI GTSAC 1 cut(s) 598
TseI GCWGC 3 cut(s) 20, 261, 523
Tsp45I GTSAC 1 cut(s) 598
TspDTI ATGAA 3 cut(s) 17, 456, 1203
TspGWI ACGGA 3 cut(s) 389, 693, 858
TspRI CASTG 5 cut(s) 244, 761, 826, 931, 1027
VpaK11BI GGWCC 1 cut(s) 1002
XapI RAATTY 3 cut(s) 622, 994, 1042
XspI CTAG 5 cut(s) 162, 230, 363, 662, 1109
ZrmI AGTACT 2 cut(s) 344, 983
Zsp2I ATGCAT 1 cut(s) 434
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.