Rw5G043170

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000068
Physical Location & Seq
Reverse (-)
75552678 .. 75554000
1323 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G043170.1

Sequence Viewer

Length: 1323 bp
ATGTGTGAAAATTGCAGCAACAAATTTGAATCTGAAGCAAAGTTTGACACTTTTCCTCTGGAAATCCGTCAAGATATCTTTCTTAGACTACCCATTAAGTCTTTGATCAGATGCACAGCTGTGCGCAAGTCATGGAGATCAGTCATAAAAAACCCAAGCTTTATTCGCACCCACCTCCGCGGGACACGCAATTCTAATGAACAAAATGACACTCAACTCTTATTGATCCACGGTTTGGCTAAAACAGCTTTAAACTTTTATGACATCTTTAGTGGGGATGAAATACAGGAGCTTTACTCTTTGCATTATGATAACCCCGCGTTTGATGAGCACCGCAAGGTTGAAGTTCCAACTGTTGAGTTGGCGAATCCAGGTTTCCGTGTTGTTGGCACTTGTAATGGACTGGTTTGCCTTATAGATGATTTAAGGTCATATACGAACACCTACATATTGTCAAATCCATCTATAAGAAAGTCTGTGGCCCTTCCCAGGTCTAATGTTACATATTGCACTCATGGTGGAAAGTCTGTGGCCCTTCCCAGGCCTAATGTTACATATTGCATTCATGGTGGGTATGAAGCTTCTGTTGGGTTCGGTTTTGATGCCATGACCAATGACTATAAGGTTGTGAGGCTTGTCACTCTTTTGGATGAACATCCCCGACATGCCCCTTGTCAAACTGTAGTTGAGGTTTTTTCACTAGCCACGGGCTCTTGGAGCATTCTTCCTGACGTTGCTCCTCGATTTCAAATGGATGCACGCACTCCCCAGGCTTTTGTTAATGGGGCTCTTCATTGGCACGCAACACGGCAGAAAAAAGATTATTTTTACTATTTCATTTTGATATTTGATGTGAGAAGGGGCTTATTTCGCGAGATCCTGATGCCAGAGAGTTTGAAATGCGATACTCGATTAACATTGCAATTGTCTGTTTCTGGAGATGGGAAGTCCATTGCTCTGTTCAGCATGTATTCTAGTCATTTTTGTGCCGATCCTTTTTTTGATATCTGGGTAATGAATGAATATTGCATCCATGAGTCCTGGACCAAATTGATTCGACTCCGTCCACATAGGGCACCACATGAAATTTTCCCCTCAAGTAGTTTGCTCCCCAAAGCATTATGTTTCAGGAAAAGCAGTGAAGTAGTAGTGTCCAAACGAAGTGATATATTCTCCTGTTCCAGGCATTCTTCTTGTCCTCAGTATGAACTATTTTCGGTAGACCTTGAGAGCCAACAATTTAAAAGTCTGGGGATTTGTGGATGTAGTTATTACACTGTCAATTCTTATGAAGAGTTTGCTATTGAGGCAAAGAACAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

440

Amino Acids

50.35

Weight (kDa)

8.26

Isoelectric Point (pI)

43.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_1 PF07734 123 - 364 1e-20 F-box associated beta propeller domain
FBA_3 PF08268 124 - 421 1.2e-12 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 125
AccB1I GGYRCC 1 cut(s) 1075
AccB7I CCANNNNNTGG 1 cut(s) 235
AccI GTMKAC 1 cut(s) 1221
AccII CGCG 3 cut(s) 180, 320, 873
AciI CCGC 4 cut(s) 178, 180, 318, 334
AclWI GGATC 3 cut(s) 220, 871, 986
AcsI RAATTY 2 cut(s) 23, 1086
AcuI CTGAAG 1 cut(s) 54
AfiI CCNNNNNNNGG 4 cut(s) 235, 489, 540, 1182
AgsI TTSAA 4 cut(s) 29, 344, 749, 898
AjnI CCWGG 6 cut(s) 370, 488, 539, 768, 1040, 1181
AjuI GAANNNNNNNTTGG 2 cut(s) 570, 602
AleI CACNNNNGTG 1 cut(s) 119
AluBI AGCT 5 cut(s) 119, 159, 248, 292, 581
AluI AGCT 5 cut(s) 119, 159, 248, 292, 581
Alw21I GWGCWC 1 cut(s) 333
AlwI GGATC 3 cut(s) 220, 871, 986
AoxI GGCC 3 cut(s) 480, 531, 542
ApeKI GCWGC 1 cut(s) 15
ApoI RAATTY 2 cut(s) 23, 1086
AspLEI GCGC 1 cut(s) 126
AspS9I GGNCC 3 cut(s) 481, 532, 1044
AvaII GGWCC 1 cut(s) 1044
BaeGI GKGCMC 1 cut(s) 1078
BanI GGYRCC 1 cut(s) 1075
BanII GRGCYC 2 cut(s) 713, 790
Bbv12I GWGCWC 1 cut(s) 333
BbvI GCAGC 1 cut(s) 27
BccI CCATC 2 cut(s) 469, 935
BceAI ACGGC 1 cut(s) 824
BciT130I CCWGG 6 cut(s) 372, 490, 541, 770, 1042, 1183
BclI TGATCA 1 cut(s) 105
BfaI CTAG 2 cut(s) 701, 975
BfmI CTRYAG 1 cut(s) 681
BisI GCNGC 1 cut(s) 16
BlsI GCNGC 1 cut(s) 17
Bme1390I CCNGG 6 cut(s) 372, 490, 541, 770, 1042, 1183
Bme18I GGWCC 1 cut(s) 1044
BmgT120I GGNCC 3 cut(s) 481, 532, 1044
BmiI GGNNCC 1 cut(s) 1077
BmrFI CCNGG 6 cut(s) 372, 490, 541, 770, 1042, 1183
BmsI GCATC 5 cut(s) 101, 592, 745, 873, 1038
BplI GAGNNNNNCTC 2 cut(s) 281, 313
BpmI CTGGAG 1 cut(s) 957
BpuEI CTTGAG 2 cut(s) 1081, 1247
BsaBI GATNNNNATC 1 cut(s) 654
BsaJI CCNNGG 6 cut(s) 178, 229, 488, 539, 705, 768
Bsc4I CCNNNNNNNGG 4 cut(s) 235, 489, 540, 1182
Bse1I ACTGG 1 cut(s) 408
Bse3DI GCAATG 2 cut(s) 917, 951
Bse8I GATNNNNATC 1 cut(s) 654
BseBI CCWGG 6 cut(s) 372, 490, 541, 770, 1042, 1183
BseDI CCNNGG 6 cut(s) 178, 229, 488, 539, 705, 768
BseGI GGATG 6 cut(s) 283, 655, 655, 760, 1029, 1268
BseJI GATNNNNATC 1 cut(s) 654
BseLI CCNNNNNNNGG 4 cut(s) 235, 489, 540, 1182
BseMI GCAATG 2 cut(s) 917, 951
BseMII CTCAG 1 cut(s) 1214
BseNI ACTGG 1 cut(s) 408
BseRI GAGGAG 1 cut(s) 729
BseSI GKGCMC 1 cut(s) 1078
BseXI GCAGC 1 cut(s) 27
Bsh1236I CGCG 3 cut(s) 180, 320, 873
BshFI GGCC 3 cut(s) 482, 533, 544
BshNI GGYRCC 1 cut(s) 1075
BsiHKAI GWGCWC 1 cut(s) 333
BslFI GGGAC 1 cut(s) 196
BslI CCNNNNNNNGG 4 cut(s) 235, 489, 540, 1182
BsmFI GGGAC 1 cut(s) 196
BsmI GAATGC 3 cut(s) 561, 720, 1186
BsnI GGCC 3 cut(s) 482, 533, 544
Bsp1286I GDGCHC 4 cut(s) 333, 713, 790, 1078
Bsp143I GATC 5 cut(s) 105, 137, 225, 876, 991
Bsp68I TCGCGA 1 cut(s) 873
BspACI CCGC 4 cut(s) 178, 180, 318, 334
BspANI GGCC 3 cut(s) 482, 533, 544
BspCNI CTCAG 1 cut(s) 1213
BspFNI CGCG 3 cut(s) 180, 320, 873
BspLI GGNNCC 1 cut(s) 1077
BspPI GGATC 3 cut(s) 220, 871, 986
BspQI GCTCTTC 1 cut(s) 795
BspT107I GGYRCC 1 cut(s) 1075
BsrDI GCAATG 2 cut(s) 917, 951
BsrI ACTGG 1 cut(s) 408
BssECI CCNNGG 6 cut(s) 178, 229, 488, 539, 705, 768
BssMI GATC 5 cut(s) 105, 137, 225, 876, 991
Bst2UI CCWGG 6 cut(s) 372, 490, 541, 770, 1042, 1183
Bst4CI ACNGT 4 cut(s) 233, 355, 682, 1279
Bst6I CTCTTC 2 cut(s) 795, 1287
BstC8I GCNNGC 2 cut(s) 760, 801
BstDEI CTNAG 2 cut(s) 83, 1200
BstDSI CCRYGG 3 cut(s) 178, 229, 705
BstENI CCTNNNNNAGG 1 cut(s) 1180
BstF5I GGATG 6 cut(s) 283, 655, 655, 760, 1029, 1268
BstFNI CGCG 3 cut(s) 180, 320, 873
BstHHI GCGC 1 cut(s) 126
BstKTI GATC 5 cut(s) 108, 140, 228, 879, 994
BstMBI GATC 5 cut(s) 105, 137, 225, 876, 991
BstMWI GCNNNNNNNGC 6 cut(s) 165, 186, 245, 717, 870, 1307
BstNI CCWGG 6 cut(s) 372, 490, 541, 770, 1042, 1183
BstNSI RCATGY 2 cut(s) 668, 970
BstSCI CCNGG 6 cut(s) 370, 488, 539, 768, 1040, 1181
BstSFI CTRYAG 1 cut(s) 681
BstSLI GKGCMC 1 cut(s) 1078
BstUI CGCG 3 cut(s) 180, 320, 873
BstV1I GCAGC 1 cut(s) 27
BstX2I RGATCY 1 cut(s) 876
BstYI RGATCY 1 cut(s) 876
BsuRI GGCC 3 cut(s) 482, 533, 544
BtgI CCRYGG 3 cut(s) 178, 229, 705
BtsCI GGATG 6 cut(s) 283, 655, 655, 760, 1029, 1268
BtsI GCAGTG 1 cut(s) 1144
BtsIMutI CAGTG 2 cut(s) 1144, 1275
BtuMI TCGCGA 1 cut(s) 873
Cac8I GCNNGC 2 cut(s) 760, 801
CfoI GCGC 1 cut(s) 126
Cfr13I GGNCC 3 cut(s) 481, 532, 1044
Cfr42I CCGCGG 1 cut(s) 181
CviAII CATG 8 cut(s) 132, 515, 566, 607, 665, 967, 1034, 1082
DdeI CTNAG 2 cut(s) 83, 1200
DpnI GATC 5 cut(s) 107, 139, 227, 878, 993
DpnII GATC 5 cut(s) 105, 137, 225, 876, 991
DraI TTTAAA 2 cut(s) 252, 1243
Eam1104I CTCTTC 2 cut(s) 795, 1287
EarI CTCTTC 2 cut(s) 795, 1287
Eco147I AGGCCT 1 cut(s) 544
Eco24I GRGCYC 2 cut(s) 713, 790
Eco32I GATATC 2 cut(s) 76, 1006
Eco47I GGWCC 1 cut(s) 1044
Eco57I CTGAAG 1 cut(s) 54
EcoNI CCTNNNNNAGG 1 cut(s) 1180
EcoRII CCWGG 6 cut(s) 370, 488, 539, 768, 1040, 1181
EcoRV GATATC 2 cut(s) 76, 1006
EcoT38I GRGCYC 2 cut(s) 713, 790
FaeI CATG 8 cut(s) 135, 518, 569, 610, 668, 970, 1037, 1085
FaqI GGGAC 1 cut(s) 196
FatI CATG 8 cut(s) 131, 514, 565, 606, 664, 966, 1033, 1081
FauI CCCGC 2 cut(s) 173, 325
FbaI TGATCA 1 cut(s) 105
FblI GTMKAC 1 cut(s) 1221
Fnu4HI GCNGC 1 cut(s) 16
FokI GGATG 6 cut(s) 290, 642, 662, 767, 1016, 1275
FriOI GRGCYC 2 cut(s) 713, 790
Fsp4HI GCNGC 1 cut(s) 16
FspBI CTAG 2 cut(s) 701, 975
FspI TGCGCA 1 cut(s) 125
GlaI GCGC 1 cut(s) 125
GluI GCNGC 1 cut(s) 16
GsuI CTGGAG 1 cut(s) 957
HaeIII GGCC 3 cut(s) 482, 533, 544
HhaI GCGC 1 cut(s) 126
Hin1II CATG 8 cut(s) 135, 518, 569, 610, 668, 970, 1037, 1085
Hin6I GCGC 1 cut(s) 124
HinP1I GCGC 1 cut(s) 124
HindIII AAGCTT 2 cut(s) 157, 579
HinfI GANTC 5 cut(s) 29, 367, 1037, 1054, 1059
Hpy166II GTNNAC 2 cut(s) 1067, 1222
Hpy188I TCNGA 2 cut(s) 34, 110
Hpy188III TCNNGA 7 cut(s) 59, 71, 728, 872, 880, 936, 1129
Hpy8I GTNNAC 2 cut(s) 1067, 1222
HpyAV CCTTC 3 cut(s) 494, 545, 852
HpyCH4III ACNGT 4 cut(s) 233, 355, 682, 1279
HpyCH4IV ACGT 1 cut(s) 732
HpyCH4V TGCA 8 cut(s) 15, 114, 304, 510, 561, 758, 922, 1029
HpyF10VI GCNNNNNNNGC 6 cut(s) 165, 186, 245, 717, 870, 1307
HpyF3I CTNAG 2 cut(s) 83, 1200
HpySE526I ACGT 1 cut(s) 732
Hsp92II CATG 8 cut(s) 135, 518, 569, 610, 668, 970, 1037, 1085
HspAI GCGC 1 cut(s) 124
Ksp22I TGATCA 1 cut(s) 105
KspI CCGCGG 1 cut(s) 181
Kzo9I GATC 5 cut(s) 105, 137, 225, 876, 991
LguI GCTCTTC 1 cut(s) 795
LmnI GCTCC 4 cut(s) 289, 717, 742, 1113
Lsp1109I GCAGC 1 cut(s) 27
LweI GCATC 5 cut(s) 101, 592, 745, 873, 1038
MaeI CTAG 2 cut(s) 701, 975
MaeII ACGT 1 cut(s) 732
MaeIII GTNAC 3 cut(s) 499, 550, 637
MalI GATC 5 cut(s) 107, 139, 227, 878, 993
MboI GATC 5 cut(s) 105, 137, 225, 876, 991
MboII GAAGA 4 cut(s) 716, 782, 1182, 1304
MfeI CAATTG 1 cut(s) 923
MflI RGATCY 1 cut(s) 876
MhlI GDGCHC 4 cut(s) 333, 713, 790, 1078
MluCI AATT 8 cut(s) 10, 23, 190, 923, 1049, 1086, 1238, 1282
MlyI GAGTC 2 cut(s) 1046, 1053
MmeI TCCRAC 1 cut(s) 374
MnlI CCTC 8 cut(s) 66, 185, 624, 682, 750, 1105, 1209, 1300
MseI TTAA 6 cut(s) 96, 251, 425, 780, 914, 1242
MslI CAYNNNNRTG 2 cut(s) 119, 984
MspA1I CMGCKG 2 cut(s) 119, 180
MspR9I CCNGG 6 cut(s) 372, 490, 541, 770, 1042, 1183
MunI CAATTG 1 cut(s) 923
Mva1269I GAATGC 3 cut(s) 561, 720, 1186
MvaI CCWGG 6 cut(s) 372, 490, 541, 770, 1042, 1183
MvnI CGCG 3 cut(s) 180, 320, 873
MwoI GCNNNNNNNGC 6 cut(s) 165, 186, 245, 717, 870, 1307
NdeII GATC 5 cut(s) 105, 137, 225, 876, 991
NlaIII CATG 8 cut(s) 135, 518, 569, 610, 668, 970, 1037, 1085
NlaIV GGNNCC 1 cut(s) 1077
NmuCI GTSAC 1 cut(s) 637
NruI TCGCGA 1 cut(s) 873
NsbI TGCGCA 1 cut(s) 125
NspI RCATGY 2 cut(s) 668, 970
OliI CACNNNNGTG 1 cut(s) 119
PceI AGGCCT 1 cut(s) 544
PciSI GCTCTTC 1 cut(s) 795
PctI GAATGC 3 cut(s) 561, 720, 1186
PfeI GAWTC 3 cut(s) 29, 367, 1054
PflFI GACNNNGTC 1 cut(s) 1062
PflMI CCANNNNNTGG 1 cut(s) 235
PfoI TCCNGGA 1 cut(s) 1040
PkrI GCNGC 1 cut(s) 17
PleI GAGTC 2 cut(s) 1045, 1053
PpsI GAGTC 2 cut(s) 1045, 1053
Psp6I CCWGG 6 cut(s) 370, 488, 539, 768, 1040, 1181
PspGI CCWGG 6 cut(s) 370, 488, 539, 768, 1040, 1181
PspN4I GGNNCC 1 cut(s) 1077
PspPI GGNCC 3 cut(s) 481, 532, 1044
PsuI RGATCY 1 cut(s) 876
PsyI GACNNNGTC 1 cut(s) 1062
PvuII CAGCTG 1 cut(s) 119
RruI TCGCGA 1 cut(s) 873
RseI CAYNNNNRTG 2 cut(s) 119, 984
SacII CCGCGG 1 cut(s) 181
SapI GCTCTTC 1 cut(s) 795
SaqAI TTAA 6 cut(s) 96, 251, 425, 780, 914, 1242
SatI GCNGC 1 cut(s) 16
Sau3AI GATC 5 cut(s) 105, 137, 225, 876, 991
Sau96I GGNCC 3 cut(s) 481, 532, 1044
SchI GAGTC 2 cut(s) 1046, 1053
ScrFI CCNGG 6 cut(s) 372, 490, 541, 770, 1042, 1183
SduI GDGCHC 4 cut(s) 333, 713, 790, 1078
SfaNI GCATC 5 cut(s) 101, 592, 745, 873, 1038
SfcI CTRYAG 1 cut(s) 681
Sfr303I CCGCGG 1 cut(s) 181
SgrBI CCGCGG 1 cut(s) 181
SinI GGWCC 1 cut(s) 1044
SmiMI CAYNNNNRTG 2 cut(s) 119, 984
SmlI CTYRAG 2 cut(s) 1096, 1226
SmoI CTYRAG 2 cut(s) 1096, 1226
Sse9I AATT 8 cut(s) 10, 23, 190, 923, 1049, 1086, 1238, 1282
SseBI AGGCCT 1 cut(s) 544
SsiI CCGC 4 cut(s) 178, 180, 318, 334
SspI AATATT 1 cut(s) 1025
SspMI CTAG 2 cut(s) 701, 975
StuI AGGCCT 1 cut(s) 544
StyD4I CCNGG 6 cut(s) 370, 488, 539, 768, 1040, 1181
TaaI ACNGT 4 cut(s) 233, 355, 682, 1279
TaiI ACGT 1 cut(s) 735
TaqI TCGA 3 cut(s) 742, 910, 1057
TasI AATT 8 cut(s) 10, 23, 190, 923, 1049, 1086, 1238, 1282
TfiI GAWTC 3 cut(s) 29, 367, 1054
Tru1I TTAA 6 cut(s) 96, 251, 425, 780, 914, 1242
Tru9I TTAA 6 cut(s) 96, 251, 425, 780, 914, 1242
TscAI CASTG 2 cut(s) 1144, 1282
TseFI GTSAC 1 cut(s) 637
TseI GCWGC 1 cut(s) 15
Tsp45I GTSAC 1 cut(s) 637
TspGWI ACGGA 3 cut(s) 56, 368, 1052
TspRI CASTG 2 cut(s) 1144, 1282
Tth111I GACNNNGTC 1 cut(s) 1062
Van91I CCANNNNNTGG 1 cut(s) 235
VpaK11BI GGWCC 1 cut(s) 1044
XagI CCTNNNNNAGG 1 cut(s) 1180
XapI RAATTY 2 cut(s) 23, 1086
XceI RCATGY 2 cut(s) 668, 970
XmiI GTMKAC 1 cut(s) 1221
XspI CTAG 2 cut(s) 701, 975
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.