RchiOBHm_Chr5g0075101

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000068
Physical Location & Seq
Forward (+)
80948541 .. 80951048
2508 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34985

Sequence Viewer

Length: 1251 bp
ATGTCAGATAATCTTCCTCAGGAAGTCATAACCAATATCTTACTTAGACTACCCGTTAAATCTTTGGTCATATGCACCTCAGTCTACAAGTCATGGGGGTCTATGATTAAGAACTCGAGCTTTATTCGAGCCCATCTCAGCCGCACAACCAACGTCAATAACCTTTATGGCACTCACCTCCTACTACTCCACGAGGTTTCTTGTAGAAGTTATAGCAGAAGCTTTGGCCACCACCAGTCCATCCACGGGCTGATAGAAGAGGTTTACTCTTTGCATTATGATAACCATGTTTTTGATGAGTACTGCAAGATAGGATTTCAATCTCCAATTGCTGATGGGGGAATGTGTAATGAGTGCTTCCGTGTGGTCGGCGTTTGTAATGGGCTGGTATTCCTTGCAGATGATTTATCGCATTTTGGTTACAACTTCATAATATGGAATCCGTCTATAAGAAAGTTGGTAACCCTTCCCAAGCCTGGCCTTAGATATCAGACTGTTGGTGGGTATAATGCTTGTCATGGGTTCGCATTTGATGCTATTACAAATGACTATAAGGTTGTGAGGCTTGTCGAGGATCAAAAGGGGGATATGGATGATAGTGATGATGCTGCGAATCAAACATTTGTGGAGGTTTATTCATTAGCTGCAGGCTCATGGAGTGACCCTAGGTTTGTTGATCCCCAATGTGAGATAAATATAGGCTCACCCCAGGCTTTTGTTAATGGGGCTCTTCATTGGGATGCATGCGATTTGACAAGTAGCTCATATCGCTATTTTATACTGGCATTTGATGTGAGCAGTGAGTCATTCCGAGAGATAATGATGCCAAAGAGTTTGGACTTGGATTTACAAATAGACTTGACGTTGCAATTGTCTGTTTTAGGAGATGGAAAATCCCTTGCTTTGTTCATGACAAATCCTACTCTTATACAACACAATTCGTTTCTTGATATATGGGTGATGAAAGAGTATTCTGTGCAGGAGTCGTGGACCAAATTGATTACTCTCCGTCCACAAGGTCCAGCAGAGAGTTTACTCAAAGCATTATGTTTTAGGAAGAGTGGCGAAGTAGTGCTGGAAATATATCATGGCCGGTATGAAGGAGAAAAAGCTAGAATTGAATTATATTCACTAGATCTTGCAAGCGGGCAACTCAAGACTCTTGGGATTTCTAGATATCAATATTACACCATGGATCCTTACGAAGAGAGCATTGTCTTACTTGACAGGAATGATGCAGTTTCTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

416

Amino Acids

47.03

Weight (kDa)

5.29

Isoelectric Point (pI)

40.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 3 - 42 1.4e-07 F-box domain
FBA_1 PF07734 120 - 338 1.7e-23 F-box associated beta propeller domain
FBA_3 PF08268 120 - 360 1.9e-19 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 84
AciI CCGC 2 cut(s) 142, 1146
AclWI GGATC 4 cut(s) 582, 671, 1190, 1203
AcoI YGGCCR 2 cut(s) 226, 1090
AfaI GTAC 1 cut(s) 302
AfiI CCNNNNNNNGG 2 cut(s) 246, 476
AgsI TTSAA 2 cut(s) 320, 1121
AjnI CCWGG 2 cut(s) 475, 708
AluBI AGCT 5 cut(s) 120, 222, 644, 762, 1112
AluI AGCT 5 cut(s) 120, 222, 644, 762, 1112
AlwI GGATC 4 cut(s) 582, 671, 1190, 1203
Ama87I CYCGRG 1 cut(s) 115
AoxI GGCC 3 cut(s) 226, 478, 1090
ApeKI GCWGC 2 cut(s) 608, 644
ArsI GACNNNNNNTTYG 2 cut(s) 653, 685
AspA2I CCTAGG 1 cut(s) 665
AspS9I GGNCC 2 cut(s) 990, 1019
AsuHPI GGTGA 3 cut(s) 167, 696, 970
AvaI CYCGRG 1 cut(s) 115
AvaII GGWCC 2 cut(s) 990, 1019
AvrII CCTAGG 1 cut(s) 665
AxyI CCTNAGG 1 cut(s) 18
BalI TGGCCA 1 cut(s) 228
BamHI GGATCC 1 cut(s) 1195
BanII GRGCYC 2 cut(s) 133, 730
BauI CACGAG 1 cut(s) 191
BbvI GCAGC 2 cut(s) 595, 631
BccI CCATC 4 cut(s) 141, 248, 329, 881
BciT130I CCWGG 2 cut(s) 477, 710
BfaI CTAG 4 cut(s) 666, 1113, 1133, 1173
BfmI CTRYAG 1 cut(s) 645
BglII AGATCT 1 cut(s) 1135
BisI GCNGC 3 cut(s) 142, 609, 645
BlnI CCTAGG 1 cut(s) 665
BlsI GCNGC 3 cut(s) 143, 610, 646
BmcAI AGTACT 1 cut(s) 302
Bme1390I CCNGG 2 cut(s) 477, 710
Bme18I GGWCC 2 cut(s) 990, 1019
BmeT110I CYCGRG 1 cut(s) 115
BmgT120I GGNCC 2 cut(s) 990, 1019
BmiI GGNNCC 1 cut(s) 1197
BmrFI CCNGG 2 cut(s) 477, 710
BmsI GCATC 5 cut(s) 523, 595, 730, 813, 1225
BplI GAGNNNNNCTC 4 cut(s) 120, 152, 251, 283
BpuEI CTTGAG 1 cut(s) 1139
BsaBI GATNNNNATC 1 cut(s) 319
BsaJI CCNNGG 4 cut(s) 244, 665, 708, 1191
Bsc4I CCNNNNNNNGG 2 cut(s) 246, 476
Bse118I RCCGGY 1 cut(s) 1092
Bse1I ACTGG 2 cut(s) 235, 786
Bse21I CCTNAGG 1 cut(s) 18
Bse8I GATNNNNATC 1 cut(s) 319
BseBI CCWGG 2 cut(s) 477, 710
BseDI CCNNGG 4 cut(s) 244, 665, 708, 1191
BseGI GGATG 3 cut(s) 240, 598, 745
BseJI GATNNNNATC 1 cut(s) 319
BseLI CCNNNNNNNGG 2 cut(s) 246, 476
BseMII CTCAG 3 cut(s) 32, 93, 151
BseNI ACTGG 2 cut(s) 235, 786
BseXI GCAGC 2 cut(s) 595, 631
BsgI GTGCAG 1 cut(s) 998
BshFI GGCC 3 cut(s) 228, 480, 1092
BsiHKCI CYCGRG 1 cut(s) 115
BsiSI CCGG 1 cut(s) 1093
BslI CCNNNNNNNGG 2 cut(s) 246, 476
BsnI GGCC 3 cut(s) 228, 480, 1092
BsoBI CYCGRG 1 cut(s) 115
Bsp1286I GDGCHC 2 cut(s) 133, 730
Bsp143I GATC 4 cut(s) 574, 676, 1135, 1195
Bsp19I CCATGG 1 cut(s) 1191
BspACI CCGC 2 cut(s) 142, 1146
BspANI GGCC 3 cut(s) 228, 480, 1092
BspCNI CTCAG 3 cut(s) 31, 92, 150
BspHI TCATGA 1 cut(s) 909
BspLI GGNNCC 1 cut(s) 1197
BspMAI CTGCAG 1 cut(s) 649
BspPI GGATC 4 cut(s) 582, 671, 1190, 1203
BspQI GCTCTTC 1 cut(s) 735
BsrFI RCCGGY 1 cut(s) 1092
BsrI ACTGG 2 cut(s) 235, 786
BssAI RCCGGY 1 cut(s) 1092
BssECI CCNNGG 4 cut(s) 244, 665, 708, 1191
BssMI GATC 4 cut(s) 574, 676, 1135, 1195
BssSI CACGAG 1 cut(s) 191
BssT1I CCWWGG 2 cut(s) 665, 1191
Bst2BI CACGAG 1 cut(s) 191
Bst2UI CCWGG 2 cut(s) 477, 710
Bst4CI ACNGT 1 cut(s) 496
Bst6I CTCTTC 4 cut(s) 252, 735, 1052, 1200
BstAPI GCANNNNNTGC 1 cut(s) 533
BstC8I GCNNGC 4 cut(s) 649, 745, 1144, 1148
BstDEI CTNAG 5 cut(s) 18, 44, 79, 137, 482
BstDSI CCRYGG 2 cut(s) 244, 1191
BstEII GGTNACC 1 cut(s) 460
BstF5I GGATG 3 cut(s) 240, 598, 745
BstKTI GATC 4 cut(s) 577, 679, 1138, 1198
BstMBI GATC 4 cut(s) 574, 676, 1135, 1195
BstMWI GCNNNNNNNGC 2 cut(s) 533, 768
BstNI CCWGG 2 cut(s) 477, 710
BstNSI RCATGY 1 cut(s) 747
BstPI GGTNACC 1 cut(s) 460
BstSCI CCNGG 2 cut(s) 475, 708
BstSFI CTRYAG 1 cut(s) 645
BstV1I GCAGC 2 cut(s) 595, 631
BstX2I RGATCY 2 cut(s) 1135, 1195
BstYI RGATCY 2 cut(s) 1135, 1195
Bsu36I CCTNAGG 1 cut(s) 18
BsuRI GGCC 3 cut(s) 228, 480, 1092
BtgI CCRYGG 2 cut(s) 244, 1191
BtsCI GGATG 3 cut(s) 240, 598, 745
BtsI GCAGTG 1 cut(s) 805
BtsIMutI CAGTG 1 cut(s) 805
Cac8I GCNNGC 4 cut(s) 649, 745, 1144, 1148
CciI TCATGA 1 cut(s) 909
Cfr10I RCCGGY 1 cut(s) 1092
Cfr13I GGNCC 2 cut(s) 990, 1019
Csp6I GTAC 1 cut(s) 301
CviAII CATG 8 cut(s) 93, 287, 518, 654, 744, 910, 1088, 1192
CviQI GTAC 1 cut(s) 301
DdeI CTNAG 5 cut(s) 18, 44, 79, 137, 482
DpnI GATC 4 cut(s) 576, 678, 1137, 1197
DpnII GATC 4 cut(s) 574, 676, 1135, 1195
EaeI YGGCCR 2 cut(s) 226, 1090
Eam1104I CTCTTC 4 cut(s) 252, 735, 1052, 1200
EarI CTCTTC 4 cut(s) 252, 735, 1052, 1200
Eco130I CCWWGG 2 cut(s) 665, 1191
Eco24I GRGCYC 2 cut(s) 133, 730
Eco32I GATATC 2 cut(s) 488, 1178
Eco47I GGWCC 2 cut(s) 990, 1019
Eco81I CCTNAGG 1 cut(s) 18
Eco88I CYCGRG 1 cut(s) 115
Eco91I GGTNACC 1 cut(s) 460
EcoO65I GGTNACC 1 cut(s) 460
EcoRII CCWGG 2 cut(s) 475, 708
EcoRV GATATC 2 cut(s) 488, 1178
EcoT14I CCWWGG 2 cut(s) 665, 1191
EcoT22I ATGCAT 1 cut(s) 745
EcoT38I GRGCYC 2 cut(s) 133, 730
ErhI CCWWGG 2 cut(s) 665, 1191
FaeI CATG 8 cut(s) 96, 290, 521, 657, 747, 913, 1091, 1195
FatI CATG 8 cut(s) 92, 286, 517, 653, 743, 909, 1087, 1191
FauI CCCGC 1 cut(s) 1139
FauNDI CATATG 1 cut(s) 71
FblI GTMKAC 1 cut(s) 84
Fnu4HI GCNGC 3 cut(s) 142, 609, 645
FokI GGATG 3 cut(s) 227, 605, 752
FriOI GRGCYC 2 cut(s) 133, 730
Fsp4HI GCNGC 3 cut(s) 142, 609, 645
FspBI CTAG 4 cut(s) 666, 1113, 1133, 1173
GluI GCNGC 3 cut(s) 142, 609, 645
HaeIII GGCC 3 cut(s) 228, 480, 1092
HapII CCGG 1 cut(s) 1093
Hin1II CATG 8 cut(s) 96, 290, 521, 657, 747, 913, 1091, 1195
HindIII AAGCTT 1 cut(s) 220
HinfI GANTC 5 cut(s) 439, 613, 803, 983, 1159
HpaII CCGG 1 cut(s) 1093
HphI GGTGA 3 cut(s) 167, 696, 970
Hpy166II GTNNAC 5 cut(s) 85, 265, 990, 1013, 1034
Hpy188I TCNGA 3 cut(s) 7, 492, 812
Hpy188III TCNNGA 5 cut(s) 20, 910, 947, 1156, 1173
Hpy8I GTNNAC 5 cut(s) 85, 265, 990, 1013, 1034
HpyAV CCTTC 2 cut(s) 476, 1094
HpyCH4III ACNGT 1 cut(s) 496
HpyCH4IV ACGT 2 cut(s) 153, 863
HpyF10VI GCNNNNNNNGC 2 cut(s) 533, 768
HpyF3I CTNAG 5 cut(s) 18, 44, 79, 137, 482
HpySE526I ACGT 2 cut(s) 153, 863
Hsp92II CATG 8 cut(s) 96, 290, 521, 657, 747, 913, 1091, 1195
Kzo9I GATC 4 cut(s) 574, 676, 1135, 1195
LguI GCTCTTC 1 cut(s) 735
Lsp1109I GCAGC 2 cut(s) 595, 631
LweI GCATC 5 cut(s) 523, 595, 730, 813, 1225
MaeI CTAG 4 cut(s) 666, 1113, 1133, 1173
MaeII ACGT 2 cut(s) 153, 863
MaeIII GTNAC 3 cut(s) 419, 460, 659
MalI GATC 4 cut(s) 576, 678, 1137, 1197
MboI GATC 4 cut(s) 574, 676, 1135, 1195
MboII GAAGA 5 cut(s) 5, 269, 722, 1069, 1217
MfeI CAATTG 2 cut(s) 327, 869
MflI RGATCY 2 cut(s) 1135, 1195
MhlI GDGCHC 2 cut(s) 133, 730
MlsI TGGCCA 1 cut(s) 228
MluCI AATT 6 cut(s) 327, 869, 937, 995, 1116, 1121
MluNI TGGCCA 1 cut(s) 228
MlyI GAGTC 3 cut(s) 812, 992, 1153
MnlI CCTC 8 cut(s) 27, 88, 187, 188, 253, 555, 565, 622
Mox20I TGGCCA 1 cut(s) 228
Mph1103I ATGCAT 1 cut(s) 745
MscI TGGCCA 1 cut(s) 228
MseI TTAA 3 cut(s) 57, 108, 720
MslI CAYNNNNRTG 1 cut(s) 738
Msp20I TGGCCA 1 cut(s) 228
MspI CCGG 1 cut(s) 1093
MspR9I CCNGG 2 cut(s) 477, 710
MunI CAATTG 2 cut(s) 327, 869
MvaI CCWGG 2 cut(s) 477, 710
MwoI GCNNNNNNNGC 2 cut(s) 533, 768
NcoI CCATGG 1 cut(s) 1191
NdeI CATATG 1 cut(s) 71
NdeII GATC 4 cut(s) 574, 676, 1135, 1195
NlaIII CATG 8 cut(s) 96, 290, 521, 657, 747, 913, 1091, 1195
NlaIV GGNNCC 1 cut(s) 1197
NmuCI GTSAC 1 cut(s) 659
NsiI ATGCAT 1 cut(s) 745
NspI RCATGY 1 cut(s) 747
PaeI GCATGC 1 cut(s) 747
PaeR7I CTCGAG 1 cut(s) 115
PagI TCATGA 1 cut(s) 909
PciSI GCTCTTC 1 cut(s) 735
PfeI GAWTC 2 cut(s) 439, 613
PkrI GCNGC 3 cut(s) 143, 610, 646
PleI GAGTC 3 cut(s) 811, 991, 1153
PpsI GAGTC 3 cut(s) 811, 991, 1153
Psp6I CCWGG 2 cut(s) 475, 708
PspEI GGTNACC 1 cut(s) 460
PspGI CCWGG 2 cut(s) 475, 708
PspN4I GGNNCC 1 cut(s) 1197
PspPI GGNCC 2 cut(s) 990, 1019
PspXI VCTCGAGB 1 cut(s) 115
PstI CTGCAG 1 cut(s) 649
PsuI RGATCY 2 cut(s) 1135, 1195
RsaI GTAC 1 cut(s) 302
RsaNI GTAC 1 cut(s) 301
RseI CAYNNNNRTG 1 cut(s) 738
SapI GCTCTTC 1 cut(s) 735
SaqAI TTAA 3 cut(s) 57, 108, 720
SatI GCNGC 3 cut(s) 142, 609, 645
Sau3AI GATC 4 cut(s) 574, 676, 1135, 1195
Sau96I GGNCC 2 cut(s) 990, 1019
ScaI AGTACT 1 cut(s) 302
SchI GAGTC 3 cut(s) 812, 992, 1153
ScrFI CCNGG 2 cut(s) 477, 710
SduI GDGCHC 2 cut(s) 133, 730
SfaNI GCATC 5 cut(s) 523, 595, 730, 813, 1225
SfcI CTRYAG 1 cut(s) 645
Sfr274I CTCGAG 1 cut(s) 115
SinI GGWCC 2 cut(s) 990, 1019
SlaI CTCGAG 1 cut(s) 115
SmiMI CAYNNNNRTG 1 cut(s) 738
SmlI CTYRAG 2 cut(s) 115, 1154
SmoI CTYRAG 2 cut(s) 115, 1154
SphI GCATGC 1 cut(s) 747
Sse9I AATT 6 cut(s) 327, 869, 937, 995, 1116, 1121
SsiI CCGC 2 cut(s) 142, 1146
SspI AATATT 1 cut(s) 1184
SspMI CTAG 4 cut(s) 666, 1113, 1133, 1173
StyD4I CCNGG 2 cut(s) 475, 708
StyI CCWWGG 2 cut(s) 665, 1191
TaaI ACNGT 1 cut(s) 496
TaiI ACGT 2 cut(s) 156, 866
TaqI TCGA 3 cut(s) 116, 127, 570
TasI AATT 6 cut(s) 327, 869, 937, 995, 1116, 1121
TatI WGTACW 1 cut(s) 300
TauI GCSGC 1 cut(s) 144
TfiI GAWTC 2 cut(s) 439, 613
Tru1I TTAA 3 cut(s) 57, 108, 720
Tru9I TTAA 3 cut(s) 57, 108, 720
TscAI CASTG 1 cut(s) 805
TseFI GTSAC 1 cut(s) 659
TseI GCWGC 2 cut(s) 608, 644
Tsp45I GTSAC 1 cut(s) 659
TspDTI ATGAA 6 cut(s) 418, 627, 722, 898, 977, 1113
TspGWI ACGGA 3 cut(s) 350, 432, 998
TspRI CASTG 1 cut(s) 805
VpaK11BI GGWCC 2 cut(s) 990, 1019
XbaI TCTAGA 1 cut(s) 1172
XceI RCATGY 1 cut(s) 747
XhoI CTCGAG 1 cut(s) 115
XmaJI CCTAGG 1 cut(s) 665
XmiI GTMKAC 1 cut(s) 84
XspI CTAG 4 cut(s) 666, 1113, 1133, 1173
ZrmI AGTACT 1 cut(s) 302
Zsp2I ATGCAT 1 cut(s) 745
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.