Prupe.5G081900_v2.0.a1

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000068
Physical Location & Seq
Reverse (-)
9507893 .. 9510565
2673 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G081900.1

Sequence Viewer

Length: 1461 bp
ATGTCCTCCAAGCTAGAAAGGGTTCTACGAGTCTTTTCTTCTTCACTCTTCTTCTCTAACGCAGCACAACGAACGACGTCGCTTCGTCAGCTCCATTTCTTCGGCTCCGCTCAGCAGGACCAGAAATTCTATTTGAATGTGCAAGACATGGATGACATACAAGAAGATATCACAAAAGGGATGCAGGAATTGAAATTTGAAGCAATGGCACTCTCTTTTCCTCAAGAAATCATACATGAGATCCTACTTAGGCTACCCGTTAAATCTTTGATCAAATGCACCTCAGTGTGCAAGGCATGGAGGTCCATGATCATAAACAAAAGATTTACCCGCGCCCACCTCAGCCAAATTAATAACATGAATGACAGGCACCTCTTCCTAGTCCACAGGGTTTCTGGTAGGGAGAGCTCCACTAGCGGCCACAGAGCCATCGTAAGCAAAGTAACAGAAGAGGTTTATTCTCTGCATTATGATAACCAGGCTTTTGACGAGTATGCCAAGATAGAATTTCCAATTGCTCCAAAGCAAGAAGTGCTCAATGAACATCTTCGTGTGGTTGGCACTTGTGACGGGCTAGTCTGCCTTGCGGATGATATGTTCTGTTATTGTTACAACTTCTTTATATGGAATCCAGCCATTAGAAAGTTAGTGACCCTTCCCGGGCCTGCTATTACCTTTAGGACACATGGTGGGTACGATGCTTCTATTGGGTTCGGTTTTGATGCTAATACCAATGACTATAAGGTTGTGCGAGTTGTAACTTTACAGCATGAAGGTGTGGGGCCAACTCTTGCTGAGGTTTATTCACTAGCTACTGGCTCATGGAGCAGTGTTTTTTCTGTTACTCCTTCATGTCAATTAAGTCGGGCATCTCAAGCTTTTGTTAATGGGGCTCTTCACTGGCCTGCACTCCGTAGGACAGATTATGGCTCTAACTATTTTATCTTGACATTTGAGGTGGGCAGTAAGTTATTTCGCGAGATACGGGTGCCAAAGATTTTAATAAAATATAATTACCACCTGGGATTATGGTTGTCTATTTCAGGAGATGGAAAATCCATTGCTCTGTTCACGATGGATAACAGATGTGAAGACTCTTTTCTTGAAATATGGATGATGAAAGAGTATGGCATGGAGGAGTCATGGACCAAATTGATTACTCTTGGTCCACAAGGGCCAGAAAGACTTCTACCCAGGGCGTCATGTTTTAGGAAGAACGGTGAAGCATTATTGATACTTTCTGGAGCTAGGGTAGCATTTTCTATGGGTTCAATACTTAGTAATCAATATACTTTTTATGGGCACCGCGCAAAATCAAATCACGAGTTAGTATCGCTAGACCTTGTGAGCAAAACCATTAAAAATCTTGGGATTTCTGGAGAAGGATATCAATATTGCAACGTCGATTCCTACAAAGAGAGCCTTGTATTATCTGACCAGACAGATGCTGTTTCGTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

487

Amino Acids

55.11

Weight (kDa)

7.97

Isoelectric Point (pI)

38.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 575
AatII GACGTC 1 cut(s) 80
AccB1I GGYRCC 3 cut(s) 369, 988, 1302
AccBSI CCGCTC 1 cut(s) 110
AccII CGCG 3 cut(s) 333, 978, 1308
AciI CCGC 5 cut(s) 108, 331, 417, 587, 1306
AclWI GGATC 1 cut(s) 235
AcoI YGGCCR 1 cut(s) 418
AcsI RAATTY 3 cut(s) 125, 194, 506
AcyI GRCGYC 2 cut(s) 77, 1199
AdeI CACNNNGTG 1 cut(s) 689
AfaI GTAC 2 cut(s) 695, 1457
AfiI CCNNNNNNNGG 1 cut(s) 660
AgsI TTSAA 5 cut(s) 136, 193, 200, 1106, 1272
AjnI CCWGG 3 cut(s) 477, 1020, 1193
AleI CACNNNNGTG 1 cut(s) 284
AloI GAACNNNNNNTCC 2 cut(s) 581, 613
AluBI AGCT 6 cut(s) 13, 91, 408, 812, 878, 1247
AluI AGCT 6 cut(s) 13, 91, 408, 812, 878, 1247
Alw21I GWGCWC 2 cut(s) 410, 537
AlwI GGATC 1 cut(s) 235
AlwNI CAGNNNCTG 1 cut(s) 1448
Ama87I CYCGRG 1 cut(s) 659
AoxI GGCC 5 cut(s) 418, 662, 782, 902, 1175
ApeKI GCWGC 1 cut(s) 62
ApoI RAATTY 3 cut(s) 125, 194, 506
AseI ATTAAT 1 cut(s) 351
Asp700I GAANNNNTTC 3 cut(s) 21, 546, 1185
AspLEI GCGC 2 cut(s) 335, 1310
AspS9I GGNCC 7 cut(s) 118, 303, 662, 782, 1146, 1166, 1175
AsuC2I CCSGG 2 cut(s) 660, 661
AsuHPI GGTGA 1 cut(s) 1232
AvaI CYCGRG 1 cut(s) 659
AvaII GGWCC 4 cut(s) 118, 303, 1146, 1166
BaeGI GKGCMC 1 cut(s) 1305
BanI GGYRCC 3 cut(s) 369, 988, 1302
BanII GRGCYC 2 cut(s) 410, 895
BauI CACGAG 1 cut(s) 1322
BbsI GAAGAC 1 cut(s) 1098
Bbv12I GWGCWC 2 cut(s) 410, 537
BbvCI CCTCAGC 2 cut(s) 341, 795
BbvI GCAGC 1 cut(s) 74
BccI CCATC 3 cut(s) 437, 1043, 1069
BciT130I CCWGG 3 cut(s) 479, 1022, 1195
BclI TGATCA 2 cut(s) 270, 309
BcnI CCSGG 2 cut(s) 660, 661
BfaI CTAG 7 cut(s) 14, 380, 414, 575, 809, 1248, 1337
BisI GCNGC 2 cut(s) 63, 418
BlpI GCTNAGC 1 cut(s) 111
BlsI GCNGC 2 cut(s) 64, 419
Bme1390I CCNGG 5 cut(s) 479, 660, 661, 1022, 1195
Bme18I GGWCC 4 cut(s) 118, 303, 1146, 1166
BmeT110I CYCGRG 1 cut(s) 659
BmgT120I GGNCC 7 cut(s) 118, 303, 662, 782, 1146, 1166, 1175
BmiI GGNNCC 5 cut(s) 106, 371, 783, 990, 1304
BmrFI CCNGG 5 cut(s) 479, 660, 661, 1022, 1195
BmsI GCATC 5 cut(s) 171, 688, 712, 878, 1435
BpiI GAAGAC 1 cut(s) 1098
BpmI CTGGAG 2 cut(s) 1263, 1398
Bpu10I CCTNAGC 2 cut(s) 341, 795
Bpu1102I GCTNAGC 1 cut(s) 111
BpuEI CTTGAG 2 cut(s) 207, 858
BpuMI CCSGG 2 cut(s) 660, 661
BsaHI GRCGYC 2 cut(s) 77, 1199
BsaJI CCNNGG 4 cut(s) 659, 1021, 1193, 1194
BsaXI ACNNNNNCTCC 2 cut(s) 1236, 1266
Bsc4I CCNNNNNNNGG 1 cut(s) 660
Bse1I ACTGG 2 cut(s) 820, 905
Bse3DI GCAATG 2 cut(s) 210, 1059
BseBI CCWGG 3 cut(s) 479, 1022, 1195
BseDI CCNNGG 4 cut(s) 659, 1021, 1193, 1194
BseGI GGATG 4 cut(s) 157, 186, 595, 1119
BseLI CCNNNNNNNGG 1 cut(s) 660
BseMI GCAATG 2 cut(s) 210, 1059
BseMII CTCAG 4 cut(s) 125, 297, 355, 786
BseNI ACTGG 2 cut(s) 820, 905
BseRI GAGGAG 1 cut(s) 1151
BseSI GKGCMC 1 cut(s) 1305
BseXI GCAGC 1 cut(s) 74
BsgI GTGCAG 1 cut(s) 891
Bsh1236I CGCG 3 cut(s) 333, 978, 1308
BshFI GGCC 5 cut(s) 420, 664, 784, 904, 1177
BshNI GGYRCC 3 cut(s) 369, 988, 1302
BsiHKAI GWGCWC 2 cut(s) 410, 537
BsiHKCI CYCGRG 1 cut(s) 659
BsiSI CCGG 1 cut(s) 660
BslI CCNNNNNNNGG 1 cut(s) 660
BsnI GGCC 5 cut(s) 420, 664, 784, 904, 1177
BsoBI CYCGRG 1 cut(s) 659
Bsp1286I GDGCHC 4 cut(s) 410, 537, 895, 1305
Bsp143I GATC 3 cut(s) 240, 270, 309
Bsp1720I GCTNAGC 1 cut(s) 111
Bsp68I TCGCGA 1 cut(s) 978
BspACI CCGC 5 cut(s) 108, 331, 417, 587, 1306
BspANI GGCC 5 cut(s) 420, 664, 784, 904, 1177
BspCNI CTCAG 4 cut(s) 124, 296, 354, 787
BspFNI CGCG 3 cut(s) 333, 978, 1308
BspLI GGNNCC 5 cut(s) 106, 371, 783, 990, 1304
BspPI GGATC 1 cut(s) 235
BspQI GCTCTTC 1 cut(s) 900
BspT107I GGYRCC 3 cut(s) 369, 988, 1302
BsrBI CCGCTC 1 cut(s) 110
BsrDI GCAATG 2 cut(s) 210, 1059
BsrI ACTGG 2 cut(s) 820, 905
BssECI CCNNGG 4 cut(s) 659, 1021, 1193, 1194
BssMI GATC 3 cut(s) 240, 270, 309
BssNI GRCGYC 2 cut(s) 77, 1199
BssSI CACGAG 1 cut(s) 1322
Bst2BI CACGAG 1 cut(s) 1322
Bst2UI CCWGG 3 cut(s) 479, 1022, 1195
Bst4CI ACNGT 1 cut(s) 1220
Bst6I CTCTTC 4 cut(s) 53, 380, 444, 900
BstACI GRCGYC 2 cut(s) 77, 1199
BstAPI GCANNNNNTGC 1 cut(s) 532
BstC8I GCNNGC 2 cut(s) 666, 906
BstDEI CTNAG 6 cut(s) 111, 248, 283, 341, 795, 1277
BstF5I GGATG 4 cut(s) 157, 186, 595, 1119
BstFNI CGCG 3 cut(s) 333, 978, 1308
BstHHI GCGC 2 cut(s) 335, 1310
BstKTI GATC 3 cut(s) 243, 273, 312
BstMBI GATC 3 cut(s) 240, 270, 309
BstMWI GCNNNNNNNGC 6 cut(s) 88, 414, 532, 825, 875, 1253
BstNI CCWGG 3 cut(s) 479, 1022, 1195
BstSCI CCNGG 5 cut(s) 477, 658, 659, 1020, 1193
BstSLI GKGCMC 1 cut(s) 1305
BstUI CGCG 3 cut(s) 333, 978, 1308
BstV1I GCAGC 1 cut(s) 74
BstV2I GAAGAC 1 cut(s) 1098
BstX2I RGATCY 1 cut(s) 240
BstYI RGATCY 1 cut(s) 240
BsuRI GGCC 5 cut(s) 420, 664, 784, 904, 1177
BtsCI GGATG 4 cut(s) 157, 186, 595, 1119
BtsI GCAGTG 1 cut(s) 835
BtsIMutI CAGTG 3 cut(s) 291, 835, 898
BtuMI TCGCGA 1 cut(s) 978
Cac8I GCNNGC 2 cut(s) 666, 906
CaiI CAGNNNCTG 1 cut(s) 1448
CfoI GCGC 2 cut(s) 335, 1310
Cfr13I GGNCC 7 cut(s) 118, 303, 662, 782, 1146, 1166, 1175
Cfr9I CCCGGG 1 cut(s) 659
CseI GACGC 1 cut(s) 1188
Csp6I GTAC 2 cut(s) 694, 1456
CviQI GTAC 2 cut(s) 694, 1456
DdeI CTNAG 6 cut(s) 111, 248, 283, 341, 795, 1277
DpnI GATC 3 cut(s) 242, 272, 311
DpnII GATC 3 cut(s) 240, 270, 309
DraIII CACNNNGTG 1 cut(s) 689
DrdI GACNNNNNNGTC 1 cut(s) 575
DseDI GACNNNNNNGTC 1 cut(s) 575
EaeI YGGCCR 1 cut(s) 418
Eam1104I CTCTTC 4 cut(s) 53, 380, 444, 900
EarI CTCTTC 4 cut(s) 53, 380, 444, 900
Ecl136II GAGCTC 1 cut(s) 408
Eco24I GRGCYC 2 cut(s) 410, 895
Eco32I GATATC 2 cut(s) 169, 1388
Eco47I GGWCC 4 cut(s) 118, 303, 1146, 1166
Eco53kI GAGCTC 1 cut(s) 408
Eco88I CYCGRG 1 cut(s) 659
EcoICRI GAGCTC 1 cut(s) 408
EcoRII CCWGG 3 cut(s) 477, 1020, 1193
EcoRV GATATC 2 cut(s) 169, 1388
EcoT38I GRGCYC 2 cut(s) 410, 895
FalI AAGNNNNNCTT 2 cut(s) 1407, 1439
FauI CCCGC 1 cut(s) 338
FbaI TGATCA 2 cut(s) 270, 309
Fnu4HI GCNGC 2 cut(s) 63, 418
FokI GGATG 4 cut(s) 164, 193, 602, 1126
FriOI GRGCYC 2 cut(s) 410, 895
Fsp4HI GCNGC 2 cut(s) 63, 418
FspBI CTAG 7 cut(s) 14, 380, 414, 575, 809, 1248, 1337
GlaI GCGC 2 cut(s) 334, 1309
GluI GCNGC 2 cut(s) 63, 418
GsuI CTGGAG 2 cut(s) 1263, 1398
HaeIII GGCC 5 cut(s) 420, 664, 784, 904, 1177
HapII CCGG 1 cut(s) 660
HgaI GACGC 1 cut(s) 1188
HhaI GCGC 2 cut(s) 335, 1310
Hin1I GRCGYC 2 cut(s) 77, 1199
Hin6I GCGC 2 cut(s) 333, 1308
HinP1I GCGC 2 cut(s) 333, 1308
HindIII AAGCTT 1 cut(s) 876
HinfI GANTC 5 cut(s) 30, 628, 1094, 1139, 1406
HpaII CCGG 1 cut(s) 660
HphI GGTGA 1 cut(s) 1232
Hpy166II GTNNAC 3 cut(s) 385, 1071, 1169
Hpy188I TCNGA 1 cut(s) 1435
Hpy188III TCNNGA 9 cut(s) 224, 946, 977, 1044, 1072, 1103, 1242, 1322, 1377
Hpy8I GTNNAC 3 cut(s) 385, 1071, 1169
Hpy99I CGWCG 3 cut(s) 79, 82, 1406
HpyAV CCTTC 4 cut(s) 665, 767, 858, 1376
HpyCH4III ACNGT 1 cut(s) 1220
HpyCH4IV ACGT 2 cut(s) 77, 1401
HpyCH4V TGCA 7 cut(s) 142, 184, 279, 291, 466, 908, 1398
HpyF10VI GCNNNNNNNGC 6 cut(s) 88, 414, 532, 825, 875, 1253
HpyF3I CTNAG 6 cut(s) 111, 248, 283, 341, 795, 1277
HpySE526I ACGT 2 cut(s) 77, 1401
Hsp92I GRCGYC 2 cut(s) 77, 1199
HspAI GCGC 2 cut(s) 333, 1308
Ksp22I TGATCA 2 cut(s) 270, 309
Kzo9I GATC 3 cut(s) 240, 270, 309
LguI GCTCTTC 1 cut(s) 900
LmnI GCTCC 6 cut(s) 96, 110, 413, 523, 825, 1244
Lsp1109I GCAGC 1 cut(s) 74
LweI GCATC 5 cut(s) 171, 688, 712, 878, 1435
MaeI CTAG 7 cut(s) 14, 380, 414, 575, 809, 1248, 1337
MaeII ACGT 2 cut(s) 77, 1401
MaeIII GTNAC 6 cut(s) 442, 566, 608, 649, 757, 841
MalI GATC 3 cut(s) 242, 272, 311
MbiI CCGCTC 1 cut(s) 110
MboI GATC 3 cut(s) 240, 270, 309
MfeI CAATTG 1 cut(s) 513
MflI RGATCY 1 cut(s) 240
MhlI GDGCHC 4 cut(s) 410, 537, 895, 1305
MluCI AATT 9 cut(s) 125, 188, 194, 348, 506, 513, 857, 1012, 1151
MlyI GAGTC 3 cut(s) 39, 1088, 1148
MroXI GAANNNNTTC 3 cut(s) 21, 546, 1185
MseI TTAA 6 cut(s) 261, 351, 860, 885, 1001, 1359
MslI CAYNNNNRTG 3 cut(s) 284, 549, 774
MspI CCGG 1 cut(s) 660
MspR9I CCNGG 5 cut(s) 479, 660, 661, 1022, 1195
MunI CAATTG 1 cut(s) 513
MvaI CCWGG 3 cut(s) 479, 1022, 1195
MvnI CGCG 3 cut(s) 333, 978, 1308
MwoI GCNNNNNNNGC 6 cut(s) 88, 414, 532, 825, 875, 1253
NciI CCSGG 2 cut(s) 660, 661
NdeII GATC 3 cut(s) 240, 270, 309
NlaIV GGNNCC 5 cut(s) 106, 371, 783, 990, 1304
NmuCI GTSAC 2 cut(s) 566, 649
NruI TCGCGA 1 cut(s) 978
OliI CACNNNNGTG 1 cut(s) 284
PasI CCCWGGG 1 cut(s) 1194
PciSI GCTCTTC 1 cut(s) 900
PdmI GAANNNNTTC 3 cut(s) 21, 546, 1185
PfeI GAWTC 2 cut(s) 628, 1406
PkrI GCNGC 2 cut(s) 64, 419
PleI GAGTC 3 cut(s) 38, 1088, 1147
PpsI GAGTC 3 cut(s) 38, 1088, 1147
PshBI ATTAAT 1 cut(s) 351
Psp124BI GAGCTC 1 cut(s) 410
Psp6I CCWGG 3 cut(s) 477, 1020, 1193
PspGI CCWGG 3 cut(s) 477, 1020, 1193
PspN4I GGNNCC 5 cut(s) 106, 371, 783, 990, 1304
PspPI GGNCC 7 cut(s) 118, 303, 662, 782, 1146, 1166, 1175
PstNI CAGNNNCTG 1 cut(s) 1448
PsuI RGATCY 1 cut(s) 240
RruI TCGCGA 1 cut(s) 978
RsaI GTAC 2 cut(s) 695, 1457
RsaNI GTAC 2 cut(s) 694, 1456
RseI CAYNNNNRTG 3 cut(s) 284, 549, 774
SacI GAGCTC 1 cut(s) 410
SapI GCTCTTC 1 cut(s) 900
SaqAI TTAA 6 cut(s) 261, 351, 860, 885, 1001, 1359
SatI GCNGC 2 cut(s) 63, 418
Sau3AI GATC 3 cut(s) 240, 270, 309
Sau96I GGNCC 7 cut(s) 118, 303, 662, 782, 1146, 1166, 1175
SchI GAGTC 3 cut(s) 39, 1088, 1148
ScrFI CCNGG 5 cut(s) 479, 660, 661, 1022, 1195
SduI GDGCHC 4 cut(s) 410, 537, 895, 1305
SfaNI GCATC 5 cut(s) 171, 688, 712, 878, 1435
SinI GGWCC 4 cut(s) 118, 303, 1146, 1166
SmaI CCCGGG 1 cut(s) 661
SmiMI CAYNNNNRTG 3 cut(s) 284, 549, 774
SmlI CTYRAG 2 cut(s) 222, 873
SmoI CTYRAG 2 cut(s) 222, 873
Sse9I AATT 9 cut(s) 125, 188, 194, 348, 506, 513, 857, 1012, 1151
SsiI CCGC 5 cut(s) 108, 331, 417, 587, 1306
SspI AATATT 1 cut(s) 1394
SspMI CTAG 7 cut(s) 14, 380, 414, 575, 809, 1248, 1337
SstI GAGCTC 1 cut(s) 410
StyD4I CCNGG 5 cut(s) 477, 658, 659, 1020, 1193
TaaI ACNGT 1 cut(s) 1220
TaiI ACGT 2 cut(s) 80, 1404
TaqI TCGA 1 cut(s) 1404
TasI AATT 9 cut(s) 125, 188, 194, 348, 506, 513, 857, 1012, 1151
TauI GCSGC 1 cut(s) 420
TfiI GAWTC 2 cut(s) 628, 1406
Tru1I TTAA 6 cut(s) 261, 351, 860, 885, 1001, 1359
Tru9I TTAA 6 cut(s) 261, 351, 860, 885, 1001, 1359
TscAI CASTG 3 cut(s) 291, 835, 905
TseFI GTSAC 2 cut(s) 566, 649
TseI GCWGC 1 cut(s) 62
Tsp45I GTSAC 2 cut(s) 566, 649
TspDTI ATGAA 5 cut(s) 374, 555, 786, 840, 1133
TspGWI ACGGA 1 cut(s) 902
TspMI CCCGGG 1 cut(s) 659
TspRI CASTG 3 cut(s) 291, 835, 905
VpaK11BI GGWCC 4 cut(s) 118, 303, 1146, 1166
VspI ATTAAT 1 cut(s) 351
XapI RAATTY 3 cut(s) 125, 194, 506
XcmI CCANNNNNNNNNTGG 1 cut(s) 392
XmaI CCCGGG 1 cut(s) 659
XmnI GAANNNNTTC 3 cut(s) 21, 546, 1185
XspI CTAG 7 cut(s) 14, 380, 414, 575, 809, 1248, 1337
ZraI GACGTC 1 cut(s) 78
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.