RchiOBHm_Chr1g0348511

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000068
Physical Location & Seq
Forward (+)
41422041 .. 41426053
4013 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57454

Sequence Viewer

Length: 1368 bp
ATGCGAGGCCTCATATTTCCTAGGGTTTTGGGACCAAAACATTCCCATTCAGGATTCAAGGCAACGGCGCTCTCTCAGTCTCACTTCATGTGGGACGATTGTTACGAAGGTAAGTCTCTATTGAGCCCTGAATCCGCCTCTAAGCTCTGTTTGTCCATCACTCACGTGTTCCAAACTTGGCTCAAATCTCTCCCCAAAGAAATCATACCCAACATCCTAATCAAACTACCCATCAAATCCTTGATCAAATTCACCTCTGTCTGCAAGTCTTGGAGGTCCACCATCAAAGACCCAAGGTTTATCCGCACCCACCTCACCCACACTCTCAATTTCAATGACCAAAATGCCACCCACCTCATTCTCCTCCACACTGTTTTCAGTGAAGGCACTTCCACCCCTTTTGGAAGAGTTCACATTTCTGGGTTCCAAGAAGACTCTTACTCTTTGCATTACGATAACAATGATGTCAGTCACTACTGCAAGGTTGAGTTCCCAATTGGTCTTAAGGAAGAAATGGTCAATCCGTGTCTTCGTGTTGTGGGTACTTGTGGTGGGCTAGTTTTGCTTGCTGATGATCTGGGGCGTTATGCTTACAACTTTGTTATATGGAACCCTTGTGTAAGAAAGTATGTGACCCTTTCCAAGCCCAGTGTTAGGTTTGCGACTCACGGTGGGTATGATGCTTCCCTTGGTCTCGGTTATGATGCTATTGGTAATGATTATAAGGTTGTGAGGGTGACCACTCTTTTGGATCAACCTGATGAGCTCCCGACGACTTTAGCTCAGGTTTATTCACTAGCCACAGGTTCTTGGGGCATGCTTCGTGTTCTTCCTCCATGTCTAGTGCCTGGCTCCTGGGTCCAGGCTTTTGTTAATGGGACACTTCACTGGCTGGCTCTCCGTTGTGTGGATGATCATTATAGCCATTTTGTTGTGGCATTTGATGTGGGAAGTGAGTCGTATCGTGAGATAATGTTGCCCAAGTGCTTTAAAGCGGAGAAGTCATTGGAGTTGAGGCTGTGTGCTTCGGGTGATAGAACATCCATTGGTCTGTTTGTGAGGTGTAAGATTGAGTCTGATTGTTTTCTTGATATATGGGTGATGAAGGAGTATTGCATTGAGAAGTCGTGGACCAAATTGATGATTCTCACTCCACAAGGTCCCAAAAGAAGCTTGCCGGAGGCATTGTGTTTTATGAGGAATGGTGAAGTGATGTTGGTACTTGAAGATGACCGTGAGTTGGTTTCACTTGACATTGGGAGCAAACAGTTTAAAAATCTTGGGATTTCTGGAGGTCAGGTATGTTCTGTTGACCTGTATGAAGAGAACCTTGTCTTGCTCGACAGGAAAGATGCAATTTCTTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

455

Amino Acids

51.31

Weight (kDa)

7.19

Isoelectric Point (pI)

28.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 62 - 102 2.8e-09 F-box domain
F-box-like PF12937 62 - 102 6e-07 F-box-like
FBA_1 PF07734 154 - 416 3.4e-23 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 179 - 426 4.4e-12 F-box protein At3g26010-like, beta-propeller
FBA_3 PF08268 180 - 407 1.7e-16 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 723
AciI CCGC 3 cut(s) 135, 304, 995
AclWI GGATC 1 cut(s) 759
AcsI RAATTY 1 cut(s) 248
AcvI CACGTG 1 cut(s) 166
AfaI GTAC 2 cut(s) 544, 1221
AfiI CCNNNNNNNGG 3 cut(s) 654, 907, 1240
AflII CTTAAG 1 cut(s) 503
AflIII ACRYGT 1 cut(s) 165
AgsI TTSAA 3 cut(s) 58, 334, 1226
AjnI CCWGG 3 cut(s) 847, 854, 861
AleI CACNNNNGTG 1 cut(s) 164
AluBI AGCT 4 cut(s) 145, 766, 782, 1173
AluI AGCT 4 cut(s) 145, 766, 782, 1173
Alw21I GWGCWC 1 cut(s) 768
Alw26I GTCTC 3 cut(s) 84, 120, 698
AlwI GGATC 1 cut(s) 759
AoxI GGCC 1 cut(s) 7
ApoI RAATTY 1 cut(s) 248
ArsI GACNNNNNNTTYG 2 cut(s) 730, 762
AspA2I CCTAGG 1 cut(s) 20
AspLEI GCGC 1 cut(s) 70
AspS9I GGNCC 5 cut(s) 32, 276, 859, 1131, 1160
AsuHPI GGTGA 6 cut(s) 244, 307, 748, 1043, 1111, 1217
AvaII GGWCC 5 cut(s) 32, 276, 859, 1131, 1160
AvrII CCTAGG 1 cut(s) 20
BanII GRGCYC 2 cut(s) 128, 768
BbrPI CACGTG 1 cut(s) 166
BbsI GAAGAC 2 cut(s) 438, 521
Bbv12I GWGCWC 1 cut(s) 768
BccI CCATC 3 cut(s) 164, 239, 290
BceAI ACGGC 1 cut(s) 81
BciT130I CCWGG 3 cut(s) 849, 856, 863
BclI TGATCA 2 cut(s) 243, 913
BcoDI GTCTC 3 cut(s) 84, 120, 698
BfaI CTAG 4 cut(s) 21, 557, 797, 842
BfoI RGCGCY 1 cut(s) 71
BfrI CTTAAG 1 cut(s) 503
BlnI CCTAGG 1 cut(s) 20
Bme1390I CCNGG 3 cut(s) 849, 856, 863
Bme18I GGWCC 5 cut(s) 32, 276, 859, 1131, 1160
BmgT120I GGNCC 5 cut(s) 32, 276, 859, 1131, 1160
BmiI GGNNCC 6 cut(s) 33, 425, 611, 853, 860, 1162
BmrFI CCNGG 3 cut(s) 849, 856, 863
BmrI ACTGGG 1 cut(s) 642
BmsI GCATC 3 cut(s) 670, 694, 1342
BmuI ACTGGG 1 cut(s) 642
BpiI GAAGAC 2 cut(s) 438, 521
BpmI CTGGAG 1 cut(s) 1311
Bpu10I CCTNAGC 1 cut(s) 783
BsaAI YACGTR 1 cut(s) 166
BsaI GGTCTC 1 cut(s) 698
BsaJI CCNNGG 4 cut(s) 20, 293, 688, 855
BsaXI ACNNNNNCTCC 4 cut(s) 1172, 1202, 1284, 1314
Bsc4I CCNNNNNNNGG 3 cut(s) 654, 907, 1240
Bse1I ACTGG 2 cut(s) 648, 893
BseBI CCWGG 3 cut(s) 849, 856, 863
BseDI CCNNGG 4 cut(s) 20, 293, 688, 855
BseGI GGATG 3 cut(s) 213, 916, 1040
BseLI CCNNNNNNNGG 3 cut(s) 654, 907, 1240
BseMII CTCAG 2 cut(s) 89, 797
BseNI ACTGG 2 cut(s) 648, 893
BseRI GAGGAG 1 cut(s) 353
BshFI GGCC 1 cut(s) 9
BsiHKAI GWGCWC 1 cut(s) 768
BsiSI CCGG 1 cut(s) 1178
BslFI GGGAC 4 cut(s) 45, 107, 892, 1146
BslI CCNNNNNNNGG 3 cut(s) 654, 907, 1240
BsmAI GTCTC 3 cut(s) 84, 120, 698
BsmFI GGGAC 4 cut(s) 45, 107, 892, 1146
BsnI GGCC 1 cut(s) 9
Bso31I GGTCTC 1 cut(s) 698
Bsp1286I GDGCHC 2 cut(s) 128, 768
Bsp143I GATC 4 cut(s) 243, 574, 751, 913
BspACI CCGC 3 cut(s) 135, 304, 995
BspANI GGCC 1 cut(s) 9
BspCNI CTCAG 2 cut(s) 88, 796
BspLI GGNNCC 6 cut(s) 33, 425, 611, 853, 860, 1162
BspPI GGATC 1 cut(s) 759
BspTI CTTAAG 1 cut(s) 503
BspTNI GGTCTC 1 cut(s) 698
BsrI ACTGG 2 cut(s) 648, 893
BssECI CCNNGG 4 cut(s) 20, 293, 688, 855
BssMI GATC 4 cut(s) 243, 574, 751, 913
BssT1I CCWWGG 3 cut(s) 20, 293, 688
Bst2UI CCWGG 3 cut(s) 849, 856, 863
Bst4CI ACNGT 4 cut(s) 373, 671, 1235, 1269
Bst6I CTCTTC 2 cut(s) 400, 1317
BstAFI CTTAAG 1 cut(s) 503
BstBAI YACGTR 1 cut(s) 166
BstC8I GCNNGC 4 cut(s) 567, 818, 894, 1175
BstDEI CTNAG 3 cut(s) 75, 141, 783
BstEII GGTNACC 1 cut(s) 736
BstF5I GGATG 3 cut(s) 213, 916, 1040
BstH2I RGCGCY 1 cut(s) 71
BstHHI GCGC 1 cut(s) 70
BstKTI GATC 4 cut(s) 246, 577, 754, 916
BstMAI GTCTC 3 cut(s) 84, 120, 698
BstMBI GATC 4 cut(s) 243, 574, 751, 913
BstMWI GCNNNNNNNGC 1 cut(s) 562
BstNI CCWGG 3 cut(s) 849, 856, 863
BstNSI RCATGY 1 cut(s) 820
BstPI GGTNACC 1 cut(s) 736
BstSCI CCNGG 3 cut(s) 847, 854, 861
BstV2I GAAGAC 2 cut(s) 438, 521
BstXI CCANNNNNNTGG 1 cut(s) 748
BsuRI GGCC 1 cut(s) 9
BtsCI GGATG 3 cut(s) 213, 916, 1040
BtsIMutI CAGTG 4 cut(s) 369, 385, 655, 886
Cac8I GCNNGC 4 cut(s) 567, 818, 894, 1175
CfoI GCGC 1 cut(s) 70
Cfr13I GGNCC 5 cut(s) 32, 276, 859, 1131, 1160
Csp6I GTAC 2 cut(s) 543, 1220
CspCI CAANNNNNGTGG 2 cut(s) 382, 417
CviAII CATG 3 cut(s) 88, 817, 837
CviQI GTAC 2 cut(s) 543, 1220
DdeI CTNAG 3 cut(s) 75, 141, 783
DpnI GATC 4 cut(s) 245, 576, 753, 915
DpnII GATC 4 cut(s) 243, 574, 751, 913
DraI TTTAAA 2 cut(s) 991, 1273
Eam1104I CTCTTC 2 cut(s) 400, 1317
EarI CTCTTC 2 cut(s) 400, 1317
EciI GGCGGA 1 cut(s) 124
Ecl136II GAGCTC 1 cut(s) 766
Eco130I CCWWGG 3 cut(s) 20, 293, 688
Eco147I AGGCCT 1 cut(s) 9
Eco24I GRGCYC 2 cut(s) 128, 768
Eco31I GGTCTC 1 cut(s) 698
Eco47I GGWCC 5 cut(s) 32, 276, 859, 1131, 1160
Eco53kI GAGCTC 1 cut(s) 766
Eco72I CACGTG 1 cut(s) 166
Eco91I GGTNACC 1 cut(s) 736
EcoICRI GAGCTC 1 cut(s) 766
EcoO109I RGGNCCY 1 cut(s) 1160
EcoO65I GGTNACC 1 cut(s) 736
EcoRII CCWGG 3 cut(s) 847, 854, 861
EcoT14I CCWWGG 3 cut(s) 20, 293, 688
EcoT38I GRGCYC 2 cut(s) 128, 768
ErhI CCWWGG 3 cut(s) 20, 293, 688
FaeI CATG 3 cut(s) 91, 820, 840
FalI AAGNNNNNCTT 2 cut(s) 1314, 1346
FaqI GGGAC 4 cut(s) 45, 107, 892, 1146
FatI CATG 3 cut(s) 87, 816, 836
FbaI TGATCA 2 cut(s) 243, 913
FokI GGATG 3 cut(s) 200, 923, 1027
FriOI GRGCYC 2 cut(s) 128, 768
FspBI CTAG 4 cut(s) 21, 557, 797, 842
GlaI GCGC 1 cut(s) 69
GsuI CTGGAG 1 cut(s) 1311
HaeII RGCGCY 1 cut(s) 71
HaeIII GGCC 1 cut(s) 9
HapII CCGG 1 cut(s) 1178
HhaI GCGC 1 cut(s) 70
Hin1II CATG 3 cut(s) 91, 820, 840
Hin6I GCGC 1 cut(s) 68
HinP1I GCGC 1 cut(s) 68
HincII GTYRAC 1 cut(s) 1312
HindII GTYRAC 1 cut(s) 1312
HindIII AAGCTT 1 cut(s) 1171
HinfI GANTC 7 cut(s) 54, 131, 434, 664, 956, 1073, 1144
HpaII CCGG 1 cut(s) 1178
HphI GGTGA 6 cut(s) 244, 307, 748, 1043, 1111, 1217
Hpy166II GTNNAC 4 cut(s) 279, 412, 1131, 1312
Hpy188I TCNGA 1 cut(s) 1078
Hpy188III TCNNGA 5 cut(s) 51, 769, 965, 1088, 1290
Hpy8I GTNNAC 4 cut(s) 279, 412, 1131, 1312
Hpy99I CGWCG 1 cut(s) 775
HpyAV CCTTC 3 cut(s) 101, 377, 1099
HpyCH4III ACNGT 4 cut(s) 373, 671, 1235, 1269
HpyCH4IV ACGT 1 cut(s) 165
HpyCH4V TGCA 5 cut(s) 264, 448, 480, 1116, 1355
HpyF10VI GCNNNNNNNGC 1 cut(s) 562
HpyF3I CTNAG 3 cut(s) 75, 141, 783
HpySE526I ACGT 1 cut(s) 165
Hsp92II CATG 3 cut(s) 91, 820, 840
HspAI GCGC 1 cut(s) 68
Ksp22I TGATCA 2 cut(s) 243, 913
Kzo9I GATC 4 cut(s) 243, 574, 751, 913
LmnI GCTCC 3 cut(s) 771, 857, 1260
LweI GCATC 3 cut(s) 670, 694, 1342
MaeI CTAG 4 cut(s) 21, 557, 797, 842
MaeII ACGT 1 cut(s) 165
MaeIII GTNAC 4 cut(s) 101, 470, 631, 736
MalI GATC 4 cut(s) 245, 576, 753, 915
MboI GATC 4 cut(s) 243, 574, 751, 913
MboII GAAGA 7 cut(s) 417, 443, 521, 521, 821, 1238, 1334
MfeI CAATTG 1 cut(s) 495
MhlI GDGCHC 2 cut(s) 128, 768
MluCI AATT 5 cut(s) 248, 328, 495, 1136, 1356
MlyI GAGTC 4 cut(s) 428, 658, 965, 1082
MseI TTAA 4 cut(s) 504, 873, 990, 1272
MslI CAYNNNNRTG 1 cut(s) 164
MspCI CTTAAG 1 cut(s) 503
MspI CCGG 1 cut(s) 1178
MspR9I CCNGG 3 cut(s) 849, 856, 863
MunI CAATTG 1 cut(s) 495
MvaI CCWGG 3 cut(s) 849, 856, 863
MwoI GCNNNNNNNGC 1 cut(s) 562
NdeII GATC 4 cut(s) 243, 574, 751, 913
NlaIII CATG 3 cut(s) 91, 820, 840
NlaIV GGNNCC 6 cut(s) 33, 425, 611, 853, 860, 1162
NmuCI GTSAC 3 cut(s) 470, 631, 736
NspI RCATGY 1 cut(s) 820
OliI CACNNNNGTG 1 cut(s) 164
PaeI GCATGC 1 cut(s) 820
PceI AGGCCT 1 cut(s) 9
PcsI WCGNNNNNNNCGW 1 cut(s) 102
PfeI GAWTC 3 cut(s) 54, 131, 1144
PleI GAGTC 4 cut(s) 428, 658, 964, 1081
PmaCI CACGTG 1 cut(s) 166
PmlI CACGTG 1 cut(s) 166
PpsI GAGTC 4 cut(s) 428, 658, 964, 1081
Ppu21I YACGTR 1 cut(s) 166
PpuMI RGGWCCY 1 cut(s) 1160
PsiI TTATAA 1 cut(s) 723
Psp124BI GAGCTC 1 cut(s) 768
Psp5II RGGWCCY 1 cut(s) 1160
Psp6I CCWGG 3 cut(s) 847, 854, 861
PspCI CACGTG 1 cut(s) 166
PspEI GGTNACC 1 cut(s) 736
PspGI CCWGG 3 cut(s) 847, 854, 861
PspN4I GGNNCC 6 cut(s) 33, 425, 611, 853, 860, 1162
PspPI GGNCC 5 cut(s) 32, 276, 859, 1131, 1160
PspPPI RGGWCCY 1 cut(s) 1160
RsaI GTAC 2 cut(s) 544, 1221
RsaNI GTAC 2 cut(s) 543, 1220
RseI CAYNNNNRTG 1 cut(s) 164
SacI GAGCTC 1 cut(s) 768
SaqAI TTAA 4 cut(s) 504, 873, 990, 1272
Sau3AI GATC 4 cut(s) 243, 574, 751, 913
Sau96I GGNCC 5 cut(s) 32, 276, 859, 1131, 1160
SchI GAGTC 4 cut(s) 428, 658, 965, 1082
ScrFI CCNGG 3 cut(s) 849, 856, 863
SduI GDGCHC 2 cut(s) 128, 768
SfaNI GCATC 3 cut(s) 670, 694, 1342
SinI GGWCC 5 cut(s) 32, 276, 859, 1131, 1160
SmiMI CAYNNNNRTG 1 cut(s) 164
SmlI CTYRAG 1 cut(s) 503
SmoI CTYRAG 1 cut(s) 503
SphI GCATGC 1 cut(s) 820
Sse9I AATT 5 cut(s) 248, 328, 495, 1136, 1356
SseBI AGGCCT 1 cut(s) 9
SsiI CCGC 3 cut(s) 135, 304, 995
SspMI CTAG 4 cut(s) 21, 557, 797, 842
SstI GAGCTC 1 cut(s) 768
StuI AGGCCT 1 cut(s) 9
StyD4I CCNGG 3 cut(s) 847, 854, 861
StyI CCWWGG 3 cut(s) 20, 293, 688
TaaI ACNGT 4 cut(s) 373, 671, 1235, 1269
TaiI ACGT 1 cut(s) 168
TaqI TCGA 1 cut(s) 1341
TasI AATT 5 cut(s) 248, 328, 495, 1136, 1356
TfiI GAWTC 3 cut(s) 54, 131, 1144
Tru1I TTAA 4 cut(s) 504, 873, 990, 1272
Tru9I TTAA 4 cut(s) 504, 873, 990, 1272
TscAI CASTG 4 cut(s) 376, 385, 655, 893
TseFI GTSAC 3 cut(s) 470, 631, 736
Tsp45I GTSAC 3 cut(s) 470, 631, 736
TspDTI ATGAA 3 cut(s) 76, 1118, 1335
TspGWI ACGGA 2 cut(s) 513, 890
TspRI CASTG 4 cut(s) 376, 385, 655, 893
Vha464I CTTAAG 1 cut(s) 503
VpaK11BI GGWCC 5 cut(s) 32, 276, 859, 1131, 1160
XapI RAATTY 1 cut(s) 248
XceI RCATGY 1 cut(s) 820
XmaJI CCTAGG 1 cut(s) 20
XspI CTAG 4 cut(s) 21, 557, 797, 842
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.