MD03G1028000.v1.1

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000068
Physical Location & Seq
Forward (+)
2298355 .. 2300422
2068 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1028000.v1.1.491

Sequence Viewer

Length: 1254 bp
ATGGCTCACAATTTTCCTGAGGAAATCATTCTTGATATCCTGTTTAGATTACCTCCTAAAACATTGATCAGGTGCACCTCAGTGTGCAAGTCATGGAACTCCATGATCAAAAATCCCAGCTTTATACTCACCCACTTCAACCGTACAATCGATCTTAATAACCAGGTTGGCACCCATCTCCGCCTTGTGTACTGTGCTCGTATAGTTAAACGGTCTAGATTCCGCCATGGTGACCTTGAGTTATTGGAGGAGCAATGCAATTTGTATTATGACAACCTTGCTTTTGATGAGTACTGCAAACTAGAATTTCCAATTGCTCCCAGGGAAGAACTGCGCAATAAAGTTTTAGACGTGGTCAGCGTTTGTAATGGGCTGGTGCTTCTTGCTGATAAAAAAGTTTGTTCAGGTAACACCTTCATTTTATGCAACCCGTCTATGAGAAAGTCAGTGACCCTTCCTAAGCCTCATTATACCTTCAAAGGAGATCCCGGTTATTATAATTGTATGGGTTTTGGTTTTGACGCTGTAACCAATGACTACAAGGTTGTGAGAATTACCATTGATCATAGGGAGGATCAGGATCCGAGTACTTTTTATGAGGTTTATTCACTGGCTGGAGGCTCATGGAGTGATCCTTGTTCTTTGGATCACGTATTAGGACTTAACAATATTCGCAAACCCACTGCTTTTGTTAATGGTGCTATTCACTGGGATGGATGGCGCCGTTTGACAAATGGTGGTTCTGAATGTTTCATTTTGGCATTTGATGTGGGCAGCGACTCATTTCGCAGTATGGTGACACCAAAGGATTTCAGAAAGTTATGCAGCGAGCATTTGTGTATTTCAGGTTACGGGAAATCTATTGCTCTGTCCTACTCTTGTTATACTGAAATTATAGAGCCTCGTCTTGATATATGGGTGATGAAAGAGTATGGTGTGGAAGAGTCATGGACCAAATTGATAACACTATATCCACCAGGTCCAGAAGGACAATCTTTGTACCAACCATTATGGTTTAGGAAGAGTGGTGATGTAGTGTTGGTACTGACTGAAAGTTTTCTGAAAGATGATAGTAGGCATGAATTAGTTTGTTTAGACCTTGTGAGCAAGCAATATACAAATCTTGGAATTCATGGATATAGATATTACTATGCTGAATCTTATGTTGAGAGCCTCGTCTTACTCGACAAGACCGATGCAGTAGAAAATGGGGCAGATAACCTTCAAGACTTTTACGATGCCGTCTCTGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_3

Protein Analysis

418

Amino Acids

47.76

Weight (kDa)

5.71

Isoelectric Point (pI)

40.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 4 - 41 4.2e-10 F-box domain
F-box-like PF12937 6 - 40 7.9e-10 F-box-like
FBA_1 PF07734 106 - 393 1e-20 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 109 - 288 7.5e-08 F-box protein At3g26010-like, beta-propeller
FBA_3 PF08268 115 - 383 5.1e-22 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 498
Acc16I TGCGCA 1 cut(s) 335
AccB1I GGYRCC 2 cut(s) 170, 720
AciI CCGC 2 cut(s) 181, 223
AclWI GGATC 6 cut(s) 479, 575, 582, 588, 626, 654
AcsI RAATTY 2 cut(s) 305, 1128
AcyI GRCGYC 1 cut(s) 721
AfaI GTAC 6 cut(s) 145, 191, 293, 589, 1001, 1044
AgsI TTSAA 3 cut(s) 139, 478, 1226
AjiI CACGTC 1 cut(s) 352
AjnI CCWGG 3 cut(s) 162, 320, 976
AleI CACNNNNGTG 1 cut(s) 80
AluBI AGCT 1 cut(s) 120
AluI AGCT 1 cut(s) 120
Alw21I GWGCWC 2 cut(s) 77, 199
Alw26I GTCTC 1 cut(s) 1249
Alw44I GTGCAC 1 cut(s) 73
AlwI GGATC 6 cut(s) 479, 575, 582, 588, 626, 654
ApaLI GTGCAC 1 cut(s) 73
ApeKI GCWGC 2 cut(s) 774, 825
ApoI RAATTY 2 cut(s) 305, 1128
Asp700I GAANNNNTTC 2 cut(s) 27, 1056
AspLEI GCGC 2 cut(s) 336, 723
AspS9I GGNCC 2 cut(s) 951, 980
AsuC2I CCSGG 1 cut(s) 489
AsuHPI GGTGA 5 cut(s) 121, 242, 808, 931, 1040
AvaII GGWCC 2 cut(s) 951, 980
AxyI CCTNAGG 1 cut(s) 18
BaeGI GKGCMC 1 cut(s) 77
BamHI GGATCC 1 cut(s) 580
BanI GGYRCC 2 cut(s) 170, 720
Bbv12I GWGCWC 2 cut(s) 77, 199
BbvI GCAGC 2 cut(s) 786, 837
BccI CCATC 3 cut(s) 183, 707, 711
BceAI ACGGC 2 cut(s) 708, 1226
BciT130I CCWGG 3 cut(s) 164, 322, 978
BclI TGATCA 3 cut(s) 66, 105, 562
BcnI CCSGG 1 cut(s) 489
BcoDI GTCTC 1 cut(s) 1249
BfaI CTAG 2 cut(s) 216, 302
BfoI RGCGCY 1 cut(s) 724
BisI GCNGC 2 cut(s) 775, 826
BlsI GCNGC 2 cut(s) 776, 827
BmcAI AGTACT 2 cut(s) 293, 589
Bme1390I CCNGG 4 cut(s) 164, 322, 489, 978
Bme18I GGWCC 2 cut(s) 951, 980
BmgBI CACGTC 1 cut(s) 352
BmgT120I GGNCC 2 cut(s) 951, 980
BmiI GGNNCC 3 cut(s) 172, 582, 722
BmrFI CCNGG 4 cut(s) 164, 322, 489, 978
BmrI ACTGGG 1 cut(s) 718
BmsI GCATC 2 cut(s) 1186, 1228
BmuI ACTGGG 1 cut(s) 718
BpmI CTGGAG 1 cut(s) 636
Bpu10I CCTNAGC 1 cut(s) 459
BpuEI CTTGAG 1 cut(s) 257
BpuMI CCSGG 1 cut(s) 489
Bsa29I ATCGAT 1 cut(s) 150
BsaAI YACGTR 1 cut(s) 652
BsaBI GATNNNNATC 1 cut(s) 579
BsaHI GRCGYC 1 cut(s) 721
BsaJI CCNNGG 3 cut(s) 226, 320, 321
Bse1I ACTGG 2 cut(s) 615, 713
Bse21I CCTNAGG 1 cut(s) 18
Bse3DI GCAATG 1 cut(s) 260
Bse8I GATNNNNATC 1 cut(s) 579
BseBI CCWGG 3 cut(s) 164, 322, 978
BseCI ATCGAT 1 cut(s) 150
BseDI CCNNGG 3 cut(s) 226, 320, 321
BseGI GGATG 2 cut(s) 718, 722
BseJI GATNNNNATC 1 cut(s) 579
BseMI GCAATG 1 cut(s) 260
BseMII CTCAG 2 cut(s) 9, 93
BseNI ACTGG 2 cut(s) 615, 713
BseRI GAGGAG 1 cut(s) 263
BseSI GKGCMC 1 cut(s) 77
BseXI GCAGC 2 cut(s) 786, 837
BseYI CCCAGC 1 cut(s) 116
BshNI GGYRCC 2 cut(s) 170, 720
BshVI ATCGAT 1 cut(s) 150
BsiHKAI GWGCWC 2 cut(s) 77, 199
BsiSI CCGG 1 cut(s) 489
BsmAI GTCTC 1 cut(s) 1249
BsmBI CGTCTC 1 cut(s) 1249
Bsp1286I GDGCHC 2 cut(s) 77, 199
Bsp143I GATC 9 cut(s) 66, 105, 151, 484, 562, 574, 580, 631, 646
Bsp19I CCATGG 1 cut(s) 226
BspACI CCGC 2 cut(s) 181, 223
BspCNI CTCAG 2 cut(s) 10, 92
BspDI ATCGAT 1 cut(s) 150
BspLI GGNNCC 3 cut(s) 172, 582, 722
BspPI GGATC 6 cut(s) 479, 575, 582, 588, 626, 654
BspT107I GGYRCC 2 cut(s) 170, 720
BsrDI GCAATG 1 cut(s) 260
BsrI ACTGG 2 cut(s) 615, 713
BssECI CCNNGG 3 cut(s) 226, 320, 321
BssMI GATC 9 cut(s) 66, 105, 151, 484, 562, 574, 580, 631, 646
BssNI GRCGYC 1 cut(s) 721
BssT1I CCWWGG 1 cut(s) 226
Bst2UI CCWGG 3 cut(s) 164, 322, 978
Bst4CI ACNGT 3 cut(s) 143, 194, 213
Bst6I CTCTTC 2 cut(s) 936, 1016
BstACI GRCGYC 1 cut(s) 721
BstBAI YACGTR 1 cut(s) 652
BstC8I GCNNGC 2 cut(s) 830, 1109
BstDEI CTNAG 3 cut(s) 18, 79, 459
BstDSI CCRYGG 1 cut(s) 226
BstEII GGTNACC 1 cut(s) 230
BstF5I GGATG 2 cut(s) 718, 722
BstH2I RGCGCY 1 cut(s) 724
BstHHI GCGC 2 cut(s) 336, 723
BstKTI GATC 9 cut(s) 69, 108, 154, 487, 565, 577, 583, 634, 649
BstMAI GTCTC 1 cut(s) 1249
BstMBI GATC 9 cut(s) 66, 105, 151, 484, 562, 574, 580, 631, 646
BstNI CCWGG 3 cut(s) 164, 322, 978
BstPI GGTNACC 1 cut(s) 230
BstSCI CCNGG 4 cut(s) 162, 320, 487, 976
BstSLI GKGCMC 1 cut(s) 77
BstV1I GCAGC 2 cut(s) 786, 837
BstX2I RGATCY 2 cut(s) 484, 580
BstYI RGATCY 2 cut(s) 484, 580
Bsu15I ATCGAT 1 cut(s) 150
Bsu36I CCTNAGG 1 cut(s) 18
BsuTUI ATCGAT 1 cut(s) 150
BtgI CCRYGG 1 cut(s) 226
BtrI CACGTC 1 cut(s) 352
BtsCI GGATG 2 cut(s) 718, 722
BtsI GCAGTG 1 cut(s) 681
BtsIMutI CAGTG 5 cut(s) 87, 453, 608, 681, 706
Cac8I GCNNGC 2 cut(s) 830, 1109
CfoI GCGC 2 cut(s) 336, 723
Cfr13I GGNCC 2 cut(s) 951, 980
ClaI ATCGAT 1 cut(s) 150
CseI GACGC 1 cut(s) 530
CsiI ACCWGGT 2 cut(s) 162, 976
Csp6I GTAC 6 cut(s) 144, 190, 292, 588, 1000, 1043
CspCI CAANNNNNGTGG 2 cut(s) 670, 705
CviAII CATG 7 cut(s) 93, 103, 227, 624, 948, 1079, 1133
CviJI RGCY 8 cut(s) 5, 120, 373, 463, 614, 621, 901, 1173
CviKI_1 RGCY 8 cut(s) 5, 120, 373, 463, 614, 621, 901, 1173
CviQI GTAC 6 cut(s) 144, 190, 292, 588, 1000, 1043
DdeI CTNAG 3 cut(s) 18, 79, 459
DinI GGCGCC 1 cut(s) 722
DpnI GATC 9 cut(s) 68, 107, 153, 486, 564, 576, 582, 633, 648
DpnII GATC 9 cut(s) 66, 105, 151, 484, 562, 574, 580, 631, 646
Eam1104I CTCTTC 2 cut(s) 936, 1016
EarI CTCTTC 2 cut(s) 936, 1016
EciI GGCGGA 2 cut(s) 170, 212
Eco130I CCWWGG 1 cut(s) 226
Eco32I GATATC 1 cut(s) 37
Eco47I GGWCC 2 cut(s) 951, 980
Eco81I CCTNAGG 1 cut(s) 18
Eco91I GGTNACC 1 cut(s) 230
EcoO65I GGTNACC 1 cut(s) 230
EcoRI GAATTC 1 cut(s) 1128
EcoRII CCWGG 3 cut(s) 162, 320, 976
EcoRV GATATC 1 cut(s) 37
EcoT14I CCWWGG 1 cut(s) 226
EgeI GGCGCC 1 cut(s) 722
EheI GGCGCC 1 cut(s) 722
ErhI CCWWGG 1 cut(s) 226
Esp3I CGTCTC 1 cut(s) 1249
FaeI CATG 7 cut(s) 96, 106, 230, 627, 951, 1082, 1136
FatI CATG 7 cut(s) 92, 102, 226, 623, 947, 1078, 1132
FbaI TGATCA 3 cut(s) 66, 105, 562
Fnu4HI GCNGC 2 cut(s) 775, 826
FokI GGATG 2 cut(s) 725, 729
Fsp4HI GCNGC 2 cut(s) 775, 826
FspBI CTAG 2 cut(s) 216, 302
FspI TGCGCA 1 cut(s) 335
GlaI GCGC 2 cut(s) 335, 722
GluI GCNGC 2 cut(s) 775, 826
GsaI CCCAGC 1 cut(s) 120
GsuI CTGGAG 1 cut(s) 636
HaeII RGCGCY 1 cut(s) 724
HapII CCGG 1 cut(s) 489
HgaI GACGC 1 cut(s) 530
HhaI GCGC 2 cut(s) 336, 723
Hin1I GRCGYC 1 cut(s) 721
Hin1II CATG 7 cut(s) 96, 106, 230, 627, 951, 1082, 1136
Hin6I GCGC 2 cut(s) 334, 721
HinP1I GCGC 2 cut(s) 334, 721
HinfI GANTC 4 cut(s) 219, 779, 944, 1157
HpaII CCGG 1 cut(s) 489
HphI GGTGA 5 cut(s) 121, 242, 808, 931, 1040
Hpy166II GTNNAC 2 cut(s) 75, 190
Hpy188I TCNGA 4 cut(s) 585, 745, 815, 1062
Hpy188III TCNNGA 7 cut(s) 17, 32, 216, 578, 908, 983, 1226
Hpy8I GTNNAC 2 cut(s) 75, 190
HpyAV CCTTC 5 cut(s) 424, 464, 484, 980, 1232
HpyCH4III ACNGT 3 cut(s) 143, 194, 213
HpyCH4IV ACGT 2 cut(s) 351, 651
HpyCH4V TGCA 7 cut(s) 75, 87, 258, 297, 426, 825, 1199
HpyF3I CTNAG 3 cut(s) 18, 79, 459
HpySE526I ACGT 2 cut(s) 351, 651
Hsp92I GRCGYC 1 cut(s) 721
Hsp92II CATG 7 cut(s) 96, 106, 230, 627, 951, 1082, 1136
HspAI GCGC 2 cut(s) 334, 721
KasI GGCGCC 1 cut(s) 720
Ksp22I TGATCA 3 cut(s) 66, 105, 562
Kzo9I GATC 9 cut(s) 66, 105, 151, 484, 562, 574, 580, 631, 646
LmnI GCTCC 2 cut(s) 250, 322
Lsp1109I GCAGC 2 cut(s) 786, 837
LweI GCATC 2 cut(s) 1186, 1228
MabI ACCWGGT 2 cut(s) 162, 976
MaeI CTAG 2 cut(s) 216, 302
MaeII ACGT 2 cut(s) 351, 651
MaeIII GTNAC 6 cut(s) 230, 407, 448, 526, 796, 848
MalI GATC 9 cut(s) 68, 107, 153, 486, 564, 576, 582, 633, 648
MboI GATC 9 cut(s) 66, 105, 151, 484, 562, 574, 580, 631, 646
MboII GAAGA 3 cut(s) 338, 953, 1033
MfeI CAATTG 1 cut(s) 312
MflI RGATCY 2 cut(s) 484, 580
MhlI GDGCHC 2 cut(s) 77, 199
Mly113I GGCGCC 1 cut(s) 721
MlyI GAGTC 2 cut(s) 773, 953
MroXI GAANNNNTTC 2 cut(s) 27, 1056
MseI TTAA 4 cut(s) 156, 207, 663, 693
MslI CAYNNNNRTG 2 cut(s) 80, 711
MspI CCGG 1 cut(s) 489
MspR9I CCNGG 4 cut(s) 164, 322, 489, 978
MunI CAATTG 1 cut(s) 312
MvaI CCWGG 3 cut(s) 164, 322, 978
NarI GGCGCC 1 cut(s) 721
NciI CCSGG 1 cut(s) 489
NcoI CCATGG 1 cut(s) 226
NdeII GATC 9 cut(s) 66, 105, 151, 484, 562, 574, 580, 631, 646
NlaIII CATG 7 cut(s) 96, 106, 230, 627, 951, 1082, 1136
NlaIV GGNNCC 3 cut(s) 172, 582, 722
NmuCI GTSAC 3 cut(s) 230, 448, 796
NsbI TGCGCA 1 cut(s) 335
OliI CACNNNNGTG 1 cut(s) 80
PasI CCCWGGG 1 cut(s) 321
PcsI WCGNNNNNNNCGW 3 cut(s) 357, 1182, 1191
PdmI GAANNNNTTC 2 cut(s) 27, 1056
PfeI GAWTC 2 cut(s) 219, 1157
PflFI GACNNNGTC 1 cut(s) 353
PkrI GCNGC 2 cut(s) 776, 827
PleI GAGTC 2 cut(s) 773, 952
PluTI GGCGCC 1 cut(s) 724
PpsI GAGTC 2 cut(s) 773, 952
Ppu21I YACGTR 1 cut(s) 652
PsiI TTATAA 1 cut(s) 498
Psp6I CCWGG 3 cut(s) 162, 320, 976
PspEI GGTNACC 1 cut(s) 230
PspFI CCCAGC 1 cut(s) 116
PspGI CCWGG 3 cut(s) 162, 320, 976
PspN4I GGNNCC 3 cut(s) 172, 582, 722
PspPI GGNCC 2 cut(s) 951, 980
PsuI RGATCY 2 cut(s) 484, 580
PsyI GACNNNGTC 1 cut(s) 353
RsaI GTAC 6 cut(s) 145, 191, 293, 589, 1001, 1044
RsaNI GTAC 6 cut(s) 144, 190, 292, 588, 1000, 1043
RseI CAYNNNNRTG 2 cut(s) 80, 711
SaqAI TTAA 4 cut(s) 156, 207, 663, 693
SatI GCNGC 2 cut(s) 775, 826
Sau3AI GATC 9 cut(s) 66, 105, 151, 484, 562, 574, 580, 631, 646
Sau96I GGNCC 2 cut(s) 951, 980
ScaI AGTACT 2 cut(s) 293, 589
SchI GAGTC 2 cut(s) 773, 953
ScrFI CCNGG 4 cut(s) 164, 322, 489, 978
SduI GDGCHC 2 cut(s) 77, 199
SexAI ACCWGGT 2 cut(s) 162, 976
SfaNI GCATC 2 cut(s) 1186, 1228
SfoI GGCGCC 1 cut(s) 722
SinI GGWCC 2 cut(s) 951, 980
SmiMI CAYNNNNRTG 2 cut(s) 80, 711
SmlI CTYRAG 1 cut(s) 236
SmoI CTYRAG 1 cut(s) 236
SsiI CCGC 2 cut(s) 181, 223
SspDI GGCGCC 1 cut(s) 720
SspI AATATT 1 cut(s) 670
SspMI CTAG 2 cut(s) 216, 302
StyD4I CCNGG 4 cut(s) 162, 320, 487, 976
StyI CCWWGG 1 cut(s) 226
TaaI ACNGT 3 cut(s) 143, 194, 213
TaiI ACGT 2 cut(s) 354, 654
TaqI TCGA 2 cut(s) 150, 1185
TaqII GACCGA 1 cut(s) 1208
TatI WGTACW 3 cut(s) 189, 291, 587
TfiI GAWTC 2 cut(s) 219, 1157
Tru1I TTAA 4 cut(s) 156, 207, 663, 693
Tru9I TTAA 4 cut(s) 156, 207, 663, 693
TscAI CASTG 5 cut(s) 87, 453, 615, 688, 713
TseFI GTSAC 3 cut(s) 230, 448, 796
TseI GCWGC 2 cut(s) 774, 825
Tsp45I GTSAC 3 cut(s) 230, 448, 796
TspDTI ATGAA 5 cut(s) 406, 742, 938, 1095, 1121
TspRI CASTG 5 cut(s) 87, 453, 615, 688, 713
Tth111I GACNNNGTC 1 cut(s) 353
VneI GTGCAC 1 cut(s) 73
VpaK11BI GGWCC 2 cut(s) 951, 980
XapI RAATTY 2 cut(s) 305, 1128
XbaI TCTAGA 1 cut(s) 215
XmnI GAANNNNTTC 2 cut(s) 27, 1056
XspI CTAG 2 cut(s) 216, 302
ZrmI AGTACT 2 cut(s) 293, 589
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.