F-box domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Pept_tRNA_hydro | PF01195 | 46 - 98 | 3.2e-08 | Peptidyl-tRNA hydrolase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 235 |
| AccB1I | GGYRCC | 1 cut(s) | 235 |
| AciI | CCGC | 1 cut(s) | 53 |
| AcoI | YGGCCR | 1 cut(s) | 404 |
| AcsI | RAATTY | 1 cut(s) | 67 |
| AfaI | GTAC | 3 cut(s) | 19, 237, 325 |
| AgsI | TTSAA | 1 cut(s) | 146 |
| AluBI | AGCT | 4 cut(s) | 30, 92, 263, 386 |
| AluI | AGCT | 4 cut(s) | 30, 92, 263, 386 |
| AoxI | GGCC | 1 cut(s) | 404 |
| ApeKI | GCWGC | 1 cut(s) | 89 |
| ApoI | RAATTY | 1 cut(s) | 67 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 220 |
| Asp718I | GGTACC | 1 cut(s) | 235 |
| AspLEI | GCGC | 1 cut(s) | 289 |
| AsuC2I | CCSGG | 1 cut(s) | 86 |
| AsuHPI | GGTGA | 1 cut(s) | 262 |
| BalI | TGGCCA | 1 cut(s) | 406 |
| BanI | GGYRCC | 1 cut(s) | 235 |
| BbsI | GAAGAC | 1 cut(s) | 362 |
| BbvI | GCAGC | 1 cut(s) | 101 |
| BccI | CCATC | 2 cut(s) | 364, 415 |
| BcnI | CCSGG | 1 cut(s) | 86 |
| BfaI | CTAG | 1 cut(s) | 418 |
| BglII | AGATCT | 1 cut(s) | 59 |
| BisI | GCNGC | 2 cut(s) | 54, 90 |
| BlsI | GCNGC | 2 cut(s) | 55, 91 |
| Bme1390I | CCNGG | 1 cut(s) | 86 |
| BmiI | GGNNCC | 2 cut(s) | 223, 237 |
| BmrFI | CCNGG | 1 cut(s) | 86 |
| BmsI | GCATC | 1 cut(s) | 322 |
| BpiI | GAAGAC | 1 cut(s) | 362 |
| BpuEI | CTTGAG | 1 cut(s) | 243 |
| BpuMI | CCSGG | 1 cut(s) | 86 |
| Bse1I | ACTGG | 2 cut(s) | 98, 213 |
| BseNI | ACTGG | 2 cut(s) | 98, 213 |
| BseXI | GCAGC | 1 cut(s) | 101 |
| BshFI | GGCC | 1 cut(s) | 406 |
| BshNI | GGYRCC | 1 cut(s) | 235 |
| BsiSI | CCGG | 1 cut(s) | 86 |
| BsnI | GGCC | 1 cut(s) | 406 |
| Bsp143I | GATC | 2 cut(s) | 59, 305 |
| BspACI | CCGC | 1 cut(s) | 53 |
| BspANI | GGCC | 1 cut(s) | 406 |
| BspHI | TCATGA | 1 cut(s) | 366 |
| BspLI | GGNNCC | 2 cut(s) | 223, 237 |
| BspT107I | GGYRCC | 1 cut(s) | 235 |
| BsrI | ACTGG | 2 cut(s) | 98, 213 |
| BssMI | GATC | 2 cut(s) | 59, 305 |
| Bst4CI | ACNGT | 1 cut(s) | 328 |
| BstC8I | GCNNGC | 1 cut(s) | 28 |
| BstDEI | CTNAG | 1 cut(s) | 351 |
| BstHHI | GCGC | 1 cut(s) | 289 |
| BstKTI | GATC | 2 cut(s) | 62, 308 |
| BstMBI | GATC | 2 cut(s) | 59, 305 |
| BstSCI | CCNGG | 1 cut(s) | 84 |
| BstV1I | GCAGC | 1 cut(s) | 101 |
| BstV2I | GAAGAC | 1 cut(s) | 362 |
| BstX2I | RGATCY | 1 cut(s) | 59 |
| BstYI | RGATCY | 1 cut(s) | 59 |
| BsuRI | GGCC | 1 cut(s) | 406 |
| BtsIMutI | CAGTG | 1 cut(s) | 206 |
| Cac8I | GCNNGC | 1 cut(s) | 28 |
| CciI | TCATGA | 1 cut(s) | 366 |
| CfoI | GCGC | 1 cut(s) | 289 |
| CseI | GACGC | 1 cut(s) | 367 |
| Csp6I | GTAC | 3 cut(s) | 18, 236, 324 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 228, 263 |
| CviAII | CATG | 3 cut(s) | 268, 367, 379 |
| CviJI | RGCY | 7 cut(s) | 5, 30, 92, 256, 263, 386, 406 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 30, 92, 256, 263, 386, 406 |
| CviQI | GTAC | 3 cut(s) | 18, 236, 324 |
| DdeI | CTNAG | 1 cut(s) | 351 |
| DpnI | GATC | 2 cut(s) | 61, 307 |
| DpnII | GATC | 2 cut(s) | 59, 305 |
| EaeI | YGGCCR | 1 cut(s) | 404 |
| FaeI | CATG | 3 cut(s) | 271, 370, 382 |
| FaiI | YATR | 9 cut(s) | 127, 269, 276, 291, 313, 315, 368, 380, 403 |
| FatI | CATG | 3 cut(s) | 267, 366, 378 |
| Fnu4HI | GCNGC | 2 cut(s) | 54, 90 |
| Fsp4HI | GCNGC | 2 cut(s) | 54, 90 |
| FspBI | CTAG | 1 cut(s) | 418 |
| GlaI | GCGC | 1 cut(s) | 288 |
| GluI | GCNGC | 2 cut(s) | 54, 90 |
| HaeIII | GGCC | 1 cut(s) | 406 |
| HapII | CCGG | 1 cut(s) | 86 |
| HgaI | GACGC | 1 cut(s) | 367 |
| HhaI | GCGC | 1 cut(s) | 289 |
| Hin1II | CATG | 3 cut(s) | 271, 370, 382 |
| Hin6I | GCGC | 1 cut(s) | 287 |
| HinP1I | GCGC | 1 cut(s) | 287 |
| HincII | GTYRAC | 1 cut(s) | 42 |
| HindII | GTYRAC | 1 cut(s) | 42 |
| HindIII | AAGCTT | 1 cut(s) | 261 |
| HpaII | CCGG | 1 cut(s) | 86 |
| HphI | GGTGA | 1 cut(s) | 262 |
| Hpy166II | GTNNAC | 1 cut(s) | 42 |
| Hpy188III | TCNNGA | 1 cut(s) | 367 |
| Hpy8I | GTNNAC | 1 cut(s) | 42 |
| HpyAV | CCTTC | 2 cut(s) | 124, 391 |
| HpyCH4III | ACNGT | 1 cut(s) | 328 |
| HpyCH4V | TGCA | 3 cut(s) | 26, 172, 317 |
| HpyF3I | CTNAG | 1 cut(s) | 351 |
| Hsp92II | CATG | 3 cut(s) | 271, 370, 382 |
| HspAI | GCGC | 1 cut(s) | 287 |
| KpnI | GGTACC | 1 cut(s) | 239 |
| Kzo9I | GATC | 2 cut(s) | 59, 305 |
| LpnPI | CCDG | 5 cut(s) | 36, 99, 111, 158, 194 |
| Lsp1109I | GCAGC | 1 cut(s) | 101 |
| LweI | GCATC | 1 cut(s) | 322 |
| MaeI | CTAG | 1 cut(s) | 418 |
| MalI | GATC | 2 cut(s) | 61, 307 |
| MboI | GATC | 2 cut(s) | 59, 305 |
| MboII | GAAGA | 2 cut(s) | 109, 367 |
| MflI | RGATCY | 1 cut(s) | 59 |
| MlsI | TGGCCA | 1 cut(s) | 406 |
| MluCI | AATT | 5 cut(s) | 67, 192, 240, 271, 339 |
| MluNI | TGGCCA | 1 cut(s) | 406 |
| MmeI | TCCRAC | 1 cut(s) | 193 |
| MnlI | CCTC | 4 cut(s) | 127, 226, 267, 313 |
| Mox20I | TGGCCA | 1 cut(s) | 406 |
| MroXI | GAANNNNTTC | 1 cut(s) | 220 |
| MscI | TGGCCA | 1 cut(s) | 406 |
| MslI | CAYNNNNRTG | 1 cut(s) | 182 |
| Msp20I | TGGCCA | 1 cut(s) | 406 |
| MspA1I | CMGCKG | 1 cut(s) | 92 |
| MspI | CCGG | 1 cut(s) | 86 |
| MspR9I | CCNGG | 1 cut(s) | 86 |
| NciI | CCSGG | 1 cut(s) | 86 |
| NdeII | GATC | 2 cut(s) | 59, 305 |
| NlaIII | CATG | 3 cut(s) | 271, 370, 382 |
| NlaIV | GGNNCC | 2 cut(s) | 223, 237 |
| PagI | TCATGA | 1 cut(s) | 366 |
| PdmI | GAANNNNTTC | 1 cut(s) | 220 |
| PkrI | GCNGC | 2 cut(s) | 55, 91 |
| PspN4I | GGNNCC | 2 cut(s) | 223, 237 |
| PsuI | RGATCY | 1 cut(s) | 59 |
| PvuII | CAGCTG | 1 cut(s) | 92 |
| RsaI | GTAC | 3 cut(s) | 19, 237, 325 |
| RsaNI | GTAC | 3 cut(s) | 18, 236, 324 |
| RseI | CAYNNNNRTG | 1 cut(s) | 182 |
| SatI | GCNGC | 2 cut(s) | 54, 90 |
| Sau3AI | GATC | 2 cut(s) | 59, 305 |
| ScrFI | CCNGG | 1 cut(s) | 86 |
| SfaNI | GCATC | 1 cut(s) | 322 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 182 |
| SmlI | CTYRAG | 1 cut(s) | 258 |
| SmoI | CTYRAG | 1 cut(s) | 258 |
| Sse9I | AATT | 5 cut(s) | 67, 192, 240, 271, 339 |
| SsiI | CCGC | 1 cut(s) | 53 |
| SspMI | CTAG | 1 cut(s) | 418 |
| StyD4I | CCNGG | 1 cut(s) | 84 |
| TaaI | ACNGT | 1 cut(s) | 328 |
| TaqI | TCGA | 2 cut(s) | 32, 132 |
| TasI | AATT | 5 cut(s) | 67, 192, 240, 271, 339 |
| TauI | GCSGC | 1 cut(s) | 56 |
| TscAI | CASTG | 1 cut(s) | 213 |
| TseI | GCWGC | 1 cut(s) | 89 |
| TspDTI | ATGAA | 4 cut(s) | 109, 200, 284, 355 |
| TspRI | CASTG | 1 cut(s) | 213 |
| XapI | RAATTY | 1 cut(s) | 67 |
| XmnI | GAANNNNTTC | 1 cut(s) | 220 |
| XspI | CTAG | 1 cut(s) | 418 |