Rroxscaffold_1G00048480

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000068
Physical Location & Seq
Reverse (-)
68503619 .. 68506721
3103 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00048480.1

Sequence Viewer

Length: 1281 bp
ATGTGGGAGGATTGTTACGAAGGTAAGTCTCTGTTGAGCCCTGAATCCGCCTCTAAGCTCTGTTTGTCCATCACTCATGTCTTCCAAACTTGGCTCAAATCTCTCCCCAAAGAAATCATACCCAACATCCTAATCAGACTACCCATCAAATCCCTGATCAAATTCACCTCTGTCTGCAAGTCTTGGAGGTCCACCATCAAAGACCCAAGCTTTATCCGCACCCACCTCACCCACACTCTCAATTTGAATGACCAAAATGCCACCCACCTCATTCTCCTCCACACTGTTTTCAGTGAAGGCACTTCCACCCCTTTTGGGAGAGTTCACATTTCTGGGTTCCAAGAAGACTCTTACTGTTTGCATTATGATAACAATGATGCCAGTCACTACTGCAAGGTTGAGTTCCCAATTGGTCTTAAGGAAGAAATGGTCAATCCGTGTCTTCGTGTTGTGGGTACTTGTGATGGGCTAGTTTTGCTTGCTGATGATTTGGGGCGTTATGCTTACAACTTTGTTATATGGAACCCTTGTGTAAGAAAGTATGTGACCCTTTCCAAGCCCAGTGTTAGGTTTGCGACTCACGGTGGGTATGATGCTTCCCTTGGTCTCGGTTATGATGCTGCTGGTAATGATTATAAGGTTGTGAGGGTGACCACTCTTTTGGATCAACCTGATGAGCTCCCGACGACTTTAGCTCAGGTTTATTCACTAGCCACAGGTTCTTGGGGCATTCTTCGTGTTCTTCCTCCATGTCTAGTGCCTGGGTCCTGGGTCCATGCTTCTGTTAATGGGACACTTCACTGGCTGGCTCTCCGTTGTGTGGATGATCATTATAGCCATTTTGTTGTGGCATTTGATGTGGGAAGTGAGTCGTATCGTGAGATAATGTTGCCCAAGTGCTTTAAAGCGGAGAAGTCATTGGAGTTGAGGCTGTGTGCTTCAGGTGATAGAAAATCCATTGGTCTGTTTGTGAGGTGTAAGAGTGAGTCTGATTGTTTTCTTGATATATGGGTGATGAAGGAGTATTGCATTGAGAAGTCATGGACCAAATTGATGATTCTCACTCCACAAGGTCCCAAAAGAAGTTTGCCGGAGGCGTTGTGTTTTAGGAGGAATGGTGAAGTGATGTTGGTACTTGAAGATGACCGTGAGTTGGTTTCACTTGACATTGGGAGCAAACAGTTTATAAATCTTGGGATTTCTGGAGGTCAGGTTTGTTCTGTTGACTCGTATGAAGAGAGCCTTGTCTTGCTCGACAGGAAAGATGCAATTTCTTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

426

Amino Acids

47.95

Weight (kDa)

6.24

Isoelectric Point (pI)

34.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 33 - 72 2.4e-09 F-box domain
F-box-like PF12937 33 - 74 2.2e-07 F-box-like
FBA_3 PF08268 147 - 375 3.4e-14 F-box associated beta propeller domain
FBA_1 PF07734 148 - 390 3.7e-25 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 150 - 396 2.1e-12 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 636, 1187
AciI CCGC 3 cut(s) 48, 217, 908
AclWI GGATC 1 cut(s) 672
AcsI RAATTY 1 cut(s) 161
AcuI CTGAAG 1 cut(s) 924
AfaI GTAC 2 cut(s) 457, 1134
AfiI CCNNNNNNNGG 4 cut(s) 315, 567, 820, 1153
AflII CTTAAG 1 cut(s) 416
AgsI TTSAA 2 cut(s) 247, 1139
AjnI CCWGG 2 cut(s) 760, 767
AluBI AGCT 4 cut(s) 58, 210, 679, 695
AluI AGCT 4 cut(s) 58, 210, 679, 695
Alw21I GWGCWC 1 cut(s) 681
Alw26I GTCTC 2 cut(s) 33, 611
AlwI GGATC 1 cut(s) 672
ApeKI GCWGC 1 cut(s) 620
ApoI RAATTY 1 cut(s) 161
ArsI GACNNNNNNTTYG 2 cut(s) 643, 675
AspS9I GGNCC 5 cut(s) 189, 765, 772, 1044, 1073
AsuHPI GGTGA 6 cut(s) 157, 220, 661, 956, 1024, 1130
AvaII GGWCC 5 cut(s) 189, 765, 772, 1044, 1073
BanII GRGCYC 2 cut(s) 41, 681
BbsI GAAGAC 3 cut(s) 73, 351, 434
Bbv12I GWGCWC 1 cut(s) 681
BbvI GCAGC 1 cut(s) 607
BccI CCATC 4 cut(s) 77, 152, 203, 458
BciT130I CCWGG 2 cut(s) 762, 769
BclI TGATCA 2 cut(s) 156, 826
BcoDI GTCTC 2 cut(s) 33, 611
BfaI CTAG 3 cut(s) 470, 710, 755
BfrI CTTAAG 1 cut(s) 416
BisI GCNGC 1 cut(s) 621
BlsI GCNGC 1 cut(s) 622
Bme1390I CCNGG 2 cut(s) 762, 769
Bme18I GGWCC 5 cut(s) 189, 765, 772, 1044, 1073
BmgT120I GGNCC 5 cut(s) 189, 765, 772, 1044, 1073
BmiI GGNNCC 5 cut(s) 338, 524, 766, 773, 1075
BmrFI CCNGG 2 cut(s) 762, 769
BmrI ACTGGG 1 cut(s) 555
BmsI GCATC 4 cut(s) 367, 583, 607, 1255
BmuI ACTGGG 1 cut(s) 555
BpiI GAAGAC 3 cut(s) 73, 351, 434
BpmI CTGGAG 1 cut(s) 1224
Bpu10I CCTNAGC 1 cut(s) 696
BsaI GGTCTC 1 cut(s) 611
BsaJI CCNNGG 3 cut(s) 601, 761, 768
BsaXI ACNNNNNCTCC 6 cut(s) 1085, 1102, 1115, 1132, 1197, 1227
Bsc4I CCNNNNNNNGG 4 cut(s) 315, 567, 820, 1153
Bse1I ACTGG 3 cut(s) 381, 561, 806
BseBI CCWGG 2 cut(s) 762, 769
BseDI CCNNGG 3 cut(s) 601, 761, 768
BseGI GGATG 2 cut(s) 126, 829
BseLI CCNNNNNNNGG 4 cut(s) 315, 567, 820, 1153
BseMII CTCAG 1 cut(s) 710
BseNI ACTGG 3 cut(s) 381, 561, 806
BseRI GAGGAG 1 cut(s) 266
BseXI GCAGC 1 cut(s) 607
BsiHKAI GWGCWC 1 cut(s) 681
BsiSI CCGG 1 cut(s) 1091
BslFI GGGAC 2 cut(s) 805, 1059
BslI CCNNNNNNNGG 4 cut(s) 315, 567, 820, 1153
BsmAI GTCTC 2 cut(s) 33, 611
BsmFI GGGAC 2 cut(s) 805, 1059
BsmI GAATGC 1 cut(s) 729
Bso31I GGTCTC 1 cut(s) 611
Bsp1286I GDGCHC 2 cut(s) 41, 681
Bsp143I GATC 3 cut(s) 156, 664, 826
BspACI CCGC 3 cut(s) 48, 217, 908
BspCNI CTCAG 1 cut(s) 709
BspLI GGNNCC 5 cut(s) 338, 524, 766, 773, 1075
BspPI GGATC 1 cut(s) 672
BspTI CTTAAG 1 cut(s) 416
BspTNI GGTCTC 1 cut(s) 611
BsrI ACTGG 3 cut(s) 381, 561, 806
BssECI CCNNGG 3 cut(s) 601, 761, 768
BssMI GATC 3 cut(s) 156, 664, 826
BssT1I CCWWGG 1 cut(s) 601
Bst2UI CCWGG 2 cut(s) 762, 769
Bst4CI ACNGT 5 cut(s) 286, 356, 584, 1148, 1182
Bst6I CTCTTC 1 cut(s) 1230
BstAFI CTTAAG 1 cut(s) 416
BstC8I GCNNGC 2 cut(s) 480, 807
BstDEI CTNAG 2 cut(s) 54, 696
BstEII GGTNACC 1 cut(s) 649
BstF5I GGATG 2 cut(s) 126, 829
BstKTI GATC 3 cut(s) 159, 667, 829
BstMAI GTCTC 2 cut(s) 33, 611
BstMBI GATC 3 cut(s) 156, 664, 826
BstMWI GCNNNNNNNGC 2 cut(s) 216, 475
BstNI CCWGG 2 cut(s) 762, 769
BstPI GGTNACC 1 cut(s) 649
BstSCI CCNGG 2 cut(s) 760, 767
BstV1I GCAGC 1 cut(s) 607
BstV2I GAAGAC 3 cut(s) 73, 351, 434
BstXI CCANNNNNNTGG 1 cut(s) 661
BtsCI GGATG 2 cut(s) 126, 829
BtsIMutI CAGTG 4 cut(s) 282, 298, 568, 799
Cac8I GCNNGC 2 cut(s) 480, 807
Cfr13I GGNCC 5 cut(s) 189, 765, 772, 1044, 1073
Csp6I GTAC 2 cut(s) 456, 1133
CspCI CAANNNNNGTGG 2 cut(s) 295, 330
CviAII CATG 4 cut(s) 77, 750, 776, 1041
CviQI GTAC 2 cut(s) 456, 1133
DdeI CTNAG 2 cut(s) 54, 696
DpnI GATC 3 cut(s) 158, 666, 828
DpnII GATC 3 cut(s) 156, 664, 826
DraI TTTAAA 1 cut(s) 904
Eam1104I CTCTTC 1 cut(s) 1230
EarI CTCTTC 1 cut(s) 1230
EciI GGCGGA 1 cut(s) 37
Ecl136II GAGCTC 1 cut(s) 679
Eco130I CCWWGG 1 cut(s) 601
Eco24I GRGCYC 2 cut(s) 41, 681
Eco31I GGTCTC 1 cut(s) 611
Eco47I GGWCC 5 cut(s) 189, 765, 772, 1044, 1073
Eco53kI GAGCTC 1 cut(s) 679
Eco57I CTGAAG 1 cut(s) 924
Eco91I GGTNACC 1 cut(s) 649
EcoICRI GAGCTC 1 cut(s) 679
EcoO109I RGGNCCY 2 cut(s) 765, 1073
EcoO65I GGTNACC 1 cut(s) 649
EcoRII CCWGG 2 cut(s) 760, 767
EcoT14I CCWWGG 1 cut(s) 601
EcoT38I GRGCYC 2 cut(s) 41, 681
ErhI CCWWGG 1 cut(s) 601
FaeI CATG 4 cut(s) 80, 753, 779, 1044
FalI AAGNNNNNCTT 2 cut(s) 1227, 1259
FaqI GGGAC 2 cut(s) 805, 1059
FatI CATG 4 cut(s) 76, 749, 775, 1040
FbaI TGATCA 2 cut(s) 156, 826
Fnu4HI GCNGC 1 cut(s) 621
FokI GGATG 2 cut(s) 113, 836
FriOI GRGCYC 2 cut(s) 41, 681
Fsp4HI GCNGC 1 cut(s) 621
FspBI CTAG 3 cut(s) 470, 710, 755
GluI GCNGC 1 cut(s) 621
GsuI CTGGAG 1 cut(s) 1224
HapII CCGG 1 cut(s) 1091
Hin1II CATG 4 cut(s) 80, 753, 779, 1044
HincII GTYRAC 1 cut(s) 1225
HindII GTYRAC 1 cut(s) 1225
HindIII AAGCTT 1 cut(s) 208
HinfI GANTC 7 cut(s) 44, 347, 577, 869, 986, 1057, 1226
HpaII CCGG 1 cut(s) 1091
HphI GGTGA 6 cut(s) 157, 220, 661, 956, 1024, 1130
Hpy166II GTNNAC 3 cut(s) 192, 325, 1225
Hpy188I TCNGA 2 cut(s) 137, 991
Hpy188III TCNNGA 4 cut(s) 682, 878, 1001, 1203
Hpy8I GTNNAC 3 cut(s) 192, 325, 1225
Hpy99I CGWCG 1 cut(s) 688
HpyAV CCTTC 3 cut(s) 14, 290, 1012
HpyCH4III ACNGT 5 cut(s) 286, 356, 584, 1148, 1182
HpyCH4V TGCA 5 cut(s) 177, 361, 393, 1029, 1268
HpyF10VI GCNNNNNNNGC 2 cut(s) 216, 475
HpyF3I CTNAG 2 cut(s) 54, 696
Hsp92II CATG 4 cut(s) 80, 753, 779, 1044
Ksp22I TGATCA 2 cut(s) 156, 826
Kzo9I GATC 3 cut(s) 156, 664, 826
LmnI GCTCC 2 cut(s) 684, 1173
Lsp1109I GCAGC 1 cut(s) 607
LweI GCATC 4 cut(s) 367, 583, 607, 1255
MaeI CTAG 3 cut(s) 470, 710, 755
MaeIII GTNAC 4 cut(s) 14, 383, 544, 649
MalI GATC 3 cut(s) 158, 666, 828
MboI GATC 3 cut(s) 156, 664, 826
MboII GAAGA 8 cut(s) 73, 356, 434, 434, 725, 734, 1151, 1247
MfeI CAATTG 1 cut(s) 408
MhlI GDGCHC 2 cut(s) 41, 681
MluCI AATT 5 cut(s) 161, 241, 408, 1049, 1269
MlyI GAGTC 5 cut(s) 341, 571, 878, 995, 1220
MseI TTAA 3 cut(s) 417, 786, 903
MspCI CTTAAG 1 cut(s) 416
MspI CCGG 1 cut(s) 1091
MspR9I CCNGG 2 cut(s) 762, 769
MunI CAATTG 1 cut(s) 408
Mva1269I GAATGC 1 cut(s) 729
MvaI CCWGG 2 cut(s) 762, 769
MwoI GCNNNNNNNGC 2 cut(s) 216, 475
NdeII GATC 3 cut(s) 156, 664, 826
NlaIII CATG 4 cut(s) 80, 753, 779, 1044
NlaIV GGNNCC 5 cut(s) 338, 524, 766, 773, 1075
NmuCI GTSAC 3 cut(s) 383, 544, 649
PctI GAATGC 1 cut(s) 729
PfeI GAWTC 2 cut(s) 44, 1057
PkrI GCNGC 1 cut(s) 622
PleI GAGTC 5 cut(s) 341, 571, 877, 994, 1220
PpsI GAGTC 5 cut(s) 341, 571, 877, 994, 1220
PpuMI RGGWCCY 2 cut(s) 765, 1073
PsiI TTATAA 2 cut(s) 636, 1187
Psp124BI GAGCTC 1 cut(s) 681
Psp5II RGGWCCY 2 cut(s) 765, 1073
Psp6I CCWGG 2 cut(s) 760, 767
PspEI GGTNACC 1 cut(s) 649
PspGI CCWGG 2 cut(s) 760, 767
PspN4I GGNNCC 5 cut(s) 338, 524, 766, 773, 1075
PspPI GGNCC 5 cut(s) 189, 765, 772, 1044, 1073
PspPPI RGGWCCY 2 cut(s) 765, 1073
RsaI GTAC 2 cut(s) 457, 1134
RsaNI GTAC 2 cut(s) 456, 1133
SacI GAGCTC 1 cut(s) 681
SaqAI TTAA 3 cut(s) 417, 786, 903
SatI GCNGC 1 cut(s) 621
Sau3AI GATC 3 cut(s) 156, 664, 826
Sau96I GGNCC 5 cut(s) 189, 765, 772, 1044, 1073
SchI GAGTC 5 cut(s) 341, 571, 878, 995, 1220
ScrFI CCNGG 2 cut(s) 762, 769
SduI GDGCHC 2 cut(s) 41, 681
SfaNI GCATC 4 cut(s) 367, 583, 607, 1255
SinI GGWCC 5 cut(s) 189, 765, 772, 1044, 1073
SmlI CTYRAG 1 cut(s) 416
SmoI CTYRAG 1 cut(s) 416
Sse9I AATT 5 cut(s) 161, 241, 408, 1049, 1269
SsiI CCGC 3 cut(s) 48, 217, 908
SspMI CTAG 3 cut(s) 470, 710, 755
SstI GAGCTC 1 cut(s) 681
StyD4I CCNGG 2 cut(s) 760, 767
StyI CCWWGG 1 cut(s) 601
TaaI ACNGT 5 cut(s) 286, 356, 584, 1148, 1182
TaqI TCGA 1 cut(s) 1254
TasI AATT 5 cut(s) 161, 241, 408, 1049, 1269
TfiI GAWTC 2 cut(s) 44, 1057
Tru1I TTAA 3 cut(s) 417, 786, 903
Tru9I TTAA 3 cut(s) 417, 786, 903
TscAI CASTG 4 cut(s) 289, 298, 568, 806
TseFI GTSAC 3 cut(s) 383, 544, 649
TseI GCWGC 1 cut(s) 620
Tsp45I GTSAC 3 cut(s) 383, 544, 649
TspDTI ATGAA 2 cut(s) 1031, 1248
TspGWI ACGGA 2 cut(s) 426, 803
TspRI CASTG 4 cut(s) 289, 298, 568, 806
Vha464I CTTAAG 1 cut(s) 416
VpaK11BI GGWCC 5 cut(s) 189, 765, 772, 1044, 1073
XapI RAATTY 1 cut(s) 161
XspI CTAG 3 cut(s) 470, 710, 755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.