Prupe.4G210300_v2.0.a1

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000068
Physical Location & Seq
Forward (+)
13115297 .. 13118798
3502 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G210300.2

Sequence Viewer

Length: 1194 bp
ATGTCTGACTATTTTCCAAAGGATATCATACAGGAAATCCTCCAGAGGTTGCCCACCAAGTGTTTGATCAAATGCACCTTAGTGTGCAAGCCATGGAGGTCTCTGATTCAAAGCCCTAGCTTCATCCACAGCCACCTCCGCCGCACAATCCATTCCAACAACCAGGACGCAGCCGTTGGCCTCCTTCTGCTGAGGGCTTTCGCCGGCAACGAAAACAGTGCGCTTTACTCCTTGCGTTGGGATAACTCTGAAACCGGTGAGCATTCCAAGCTTGTAAATCCTTACCCTTACATTAAAGAAGCTATTTTCTCCCCAAGTGAAAGAGTTGTAGTTCGGGACTTCCATGTGGTAGGAGCTTGTAATGGGCTCGTATGCCTTGCTGTTGACTTTGCCTATGTTGGTTCCCAAACAATCATTTGGAACCCTTCTGTTAGAAAGTTTGTAACTTTGCCTAGGCGTGGTGTTTCACTGAGCAAAACTGGCAAGCATAGAGCAAGCTATGCTTTTGGGTATGATTCGCGTACCAATGACTATAAAGTTTTGAGAAGTACGAGTAATAGGTACGGGAAAACCCCATGTGAGGTTGAGATTTGGTCGTTACTCAGGGGCTCCTGGAAGAGTCTTAGTGCTGCTGTTGTTCCAGAAGATTTCATGTTTGGAGTTTATAATAATCGTAATGTTGTTCCTGGGAATTTTGGGCCTGTAGATAAACATGCTTTTGTCAATGGTGCTCTTCACTGGGTTCAACGCCGTACTGTAGGGGAGGACAAATTCATTTTGTGGTTTCATATGGGCAGTGAATTATTTGGAGAGATAATGATGCCTGAAGGTTTGACAAGAGAGCGTTGCTTTGTTTTAAGGTACGAGGAGTCCCTTGCCTTGTTAAAGAGTGAAGAACTACAGGGAAATTGTTCTAAATTCGACATTTGGGTGATGAAAGAGCATGGTGTGGTGGAATCGTGGACTAAATTATTTACCGTACACCTGCAACGCCATATGTTGGAGCCATTTTGTTTTACAAGGAGCGGTGAACTAGTGTTCAAAATGTGTGGAAGTGGTCGACGGCTGCTAAAGGTGGATCTTAAGACGGAAGAATTTAAATATTTTGGAATTGATGGATATATGTGTCACTTCATGGATTCTTTTGTGGAGAGCCTTGTCTTACTTGGCCAAGCCAATGCTATTTCTTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

398

Amino Acids

45.49

Weight (kDa)

8.86

Isoelectric Point (pI)

45.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 666
AarI CACCTGC 1 cut(s) 993
Acc36I ACCTGC 1 cut(s) 993
AccB7I CCANNNNNTGG 1 cut(s) 1000
AccBSI CCGCTC 1 cut(s) 1026
AccI GTMKAC 1 cut(s) 1060
AccII CGCG 1 cut(s) 520
AciI CCGC 3 cut(s) 139, 142, 1026
AclWI GGATC 1 cut(s) 1086
AcoI YGGCCR 1 cut(s) 1168
AcsI RAATTY 4 cut(s) 691, 770, 917, 1094
AcuI CTGAAG 1 cut(s) 846
AdeI CACNNNGTG 1 cut(s) 60
AfaI GTAC 6 cut(s) 523, 550, 563, 754, 863, 981
AfiI CCNNNNNNNGG 4 cut(s) 237, 458, 580, 1000
AflII CTTAAG 1 cut(s) 1082
AgeI ACCGGT 1 cut(s) 254
AgsI TTSAA 3 cut(s) 110, 746, 1042
AhlI ACTAGT 1 cut(s) 1033
AjnI CCWGG 3 cut(s) 162, 611, 685
AleI CACNNNNGTG 1 cut(s) 80
AluBI AGCT 5 cut(s) 120, 271, 302, 356, 498
AluI AGCT 5 cut(s) 120, 271, 302, 356, 498
Alw21I GWGCWC 1 cut(s) 733
Alw26I GTCTC 1 cut(s) 105
AlwI GGATC 1 cut(s) 1086
AoxI GGCC 3 cut(s) 178, 698, 1168
ApeKI GCWGC 3 cut(s) 170, 629, 1066
ApoI RAATTY 4 cut(s) 691, 770, 917, 1094
AsiGI ACCGGT 1 cut(s) 254
Asp700I GAANNNNTTC 1 cut(s) 910
AspA2I CCTAGG 1 cut(s) 452
AspLEI GCGC 1 cut(s) 223
AspS9I GGNCC 1 cut(s) 698
AsuHPI GGTGA 3 cut(s) 269, 943, 1040
AvrII CCTAGG 1 cut(s) 452
BalI TGGCCA 1 cut(s) 1170
BanII GRGCYC 2 cut(s) 369, 611
Bbv12I GWGCWC 1 cut(s) 733
BbvCI CCTCAGC 1 cut(s) 191
BbvI GCAGC 3 cut(s) 182, 616, 1053
BccI CCATC 1 cut(s) 1109
BceAI ACGGC 3 cut(s) 158, 735, 1079
BcgI CGANNNNNNTGC 2 cut(s) 200, 234
BciT130I CCWGG 3 cut(s) 164, 613, 687
BclI TGATCA 1 cut(s) 66
BcoDI GTCTC 1 cut(s) 105
BcuI ACTAGT 1 cut(s) 1033
BfaI CTAG 3 cut(s) 117, 453, 1034
BfmI CTRYAG 3 cut(s) 702, 756, 899
BfrI CTTAAG 1 cut(s) 1082
BfuAI ACCTGC 1 cut(s) 993
BisI GCNGC 4 cut(s) 142, 171, 630, 1067
BlnI CCTAGG 1 cut(s) 452
BlsI GCNGC 4 cut(s) 143, 172, 631, 1068
Bme1390I CCNGG 3 cut(s) 164, 613, 687
BmgT120I GGNCC 1 cut(s) 698
BmiI GGNNCC 4 cut(s) 403, 422, 610, 1005
BmrFI CCNGG 3 cut(s) 164, 613, 687
BmrI ACTGGG 1 cut(s) 748
BmsI GCATC 1 cut(s) 810
BmuI ACTGGG 1 cut(s) 748
BpmI CTGGAG 1 cut(s) 26
Bpu10I CCTNAGC 1 cut(s) 191
BsaI GGTCTC 1 cut(s) 105
BsaJI CCNNGG 3 cut(s) 92, 452, 686
BsaWI WCCGGW 1 cut(s) 254
Bsc4I CCNNNNNNNGG 4 cut(s) 237, 458, 580, 1000
Bse118I RCCGGY 2 cut(s) 203, 254
Bse1I ACTGG 2 cut(s) 484, 743
BseBI CCWGG 3 cut(s) 164, 613, 687
BseDI CCNNGG 3 cut(s) 92, 452, 686
BseGI GGATG 1 cut(s) 123
BseLI CCNNNNNNNGG 4 cut(s) 237, 458, 580, 1000
BseMII CTCAG 3 cut(s) 182, 461, 616
BseNI ACTGG 2 cut(s) 484, 743
BseRI GAGGAG 1 cut(s) 881
BseXI GCAGC 3 cut(s) 182, 616, 1053
Bsh1236I CGCG 1 cut(s) 520
BshFI GGCC 3 cut(s) 180, 700, 1170
BshTI ACCGGT 1 cut(s) 254
BsiHKAI GWGCWC 1 cut(s) 733
BsiSI CCGG 2 cut(s) 204, 255
BslFI GGGAC 2 cut(s) 350, 856
BslI CCNNNNNNNGG 4 cut(s) 237, 458, 580, 1000
BsmAI GTCTC 1 cut(s) 105
BsmFI GGGAC 2 cut(s) 350, 856
BsmI GAATGC 1 cut(s) 262
BsnI GGCC 3 cut(s) 180, 700, 1170
Bso31I GGTCTC 1 cut(s) 105
Bsp1286I GDGCHC 3 cut(s) 369, 611, 733
Bsp143I GATC 2 cut(s) 66, 1078
Bsp19I CCATGG 1 cut(s) 92
BspACI CCGC 3 cut(s) 139, 142, 1026
BspANI GGCC 3 cut(s) 180, 700, 1170
BspCNI CTCAG 3 cut(s) 183, 462, 615
BspFNI CGCG 1 cut(s) 520
BspLI GGNNCC 4 cut(s) 403, 422, 610, 1005
BspMI ACCTGC 1 cut(s) 993
BspPI GGATC 1 cut(s) 1086
BspQI GCTCTTC 1 cut(s) 738
BspTI CTTAAG 1 cut(s) 1082
BspTNI GGTCTC 1 cut(s) 105
BsrBI CCGCTC 1 cut(s) 1026
BsrFI RCCGGY 2 cut(s) 203, 254
BsrI ACTGG 2 cut(s) 484, 743
BssAI RCCGGY 2 cut(s) 203, 254
BssECI CCNNGG 3 cut(s) 92, 452, 686
BssMI GATC 2 cut(s) 66, 1078
BssT1I CCWWGG 2 cut(s) 92, 452
Bst2UI CCWGG 3 cut(s) 164, 613, 687
Bst4CI ACNGT 3 cut(s) 218, 757, 979
Bst6I CTCTTC 2 cut(s) 611, 738
BstAFI CTTAAG 1 cut(s) 1082
BstAPI GCANNNNNTGC 1 cut(s) 500
BstC8I GCNNGC 4 cut(s) 89, 205, 485, 496
BstDEI CTNAG 5 cut(s) 79, 191, 470, 602, 623
BstDSI CCRYGG 1 cut(s) 92
BstF5I GGATG 1 cut(s) 123
BstFNI CGCG 1 cut(s) 520
BstHHI GCGC 1 cut(s) 223
BstKTI GATC 2 cut(s) 69, 1081
BstMAI GTCTC 1 cut(s) 105
BstMBI GATC 2 cut(s) 66, 1078
BstMWI GCNNNNNNNGC 4 cut(s) 138, 268, 480, 500
BstNI CCWGG 3 cut(s) 164, 613, 687
BstNSI RCATGY 1 cut(s) 716
BstSCI CCNGG 3 cut(s) 162, 611, 685
BstSFI CTRYAG 3 cut(s) 702, 756, 899
BstUI CGCG 1 cut(s) 520
BstV1I GCAGC 3 cut(s) 182, 616, 1053
BstX2I RGATCY 1 cut(s) 1078
BstYI RGATCY 1 cut(s) 1078
BsuRI GGCC 3 cut(s) 180, 700, 1170
BtgI CCRYGG 1 cut(s) 92
BtsCI GGATG 1 cut(s) 123
BtsI GCAGTG 1 cut(s) 802
BtsIMutI CAGTG 4 cut(s) 223, 467, 736, 802
BveI ACCTGC 1 cut(s) 993
Cac8I GCNNGC 4 cut(s) 89, 205, 485, 496
CfoI GCGC 1 cut(s) 223
Cfr10I RCCGGY 2 cut(s) 203, 254
Cfr13I GGNCC 1 cut(s) 698
CseI GACGC 1 cut(s) 176
Csp6I GTAC 6 cut(s) 522, 549, 562, 753, 862, 980
CspAI ACCGGT 1 cut(s) 254
CspCI CAANNNNNGTGG 2 cut(s) 1030, 1065
CviAII CATG 7 cut(s) 93, 344, 576, 652, 713, 944, 1135
CviQI GTAC 6 cut(s) 522, 549, 562, 753, 862, 980
DdeI CTNAG 5 cut(s) 79, 191, 470, 602, 623
DpnI GATC 2 cut(s) 68, 1080
DpnII GATC 2 cut(s) 66, 1078
DraI TTTAAA 1 cut(s) 1099
DraIII CACNNNGTG 1 cut(s) 60
EaeI YGGCCR 1 cut(s) 1168
Eam1104I CTCTTC 2 cut(s) 611, 738
EarI CTCTTC 2 cut(s) 611, 738
EciI GGCGGA 1 cut(s) 128
Eco130I CCWWGG 2 cut(s) 92, 452
Eco24I GRGCYC 2 cut(s) 369, 611
Eco31I GGTCTC 1 cut(s) 105
Eco32I GATATC 1 cut(s) 25
Eco57I CTGAAG 1 cut(s) 846
EcoRII CCWGG 3 cut(s) 162, 611, 685
EcoRV GATATC 1 cut(s) 25
EcoT14I CCWWGG 2 cut(s) 92, 452
EcoT38I GRGCYC 2 cut(s) 369, 611
ErhI CCWWGG 2 cut(s) 92, 452
FaeI CATG 7 cut(s) 96, 347, 579, 655, 716, 947, 1138
FalI AAGNNNNNCTT 2 cut(s) 487, 519
FaqI GGGAC 2 cut(s) 350, 856
FatI CATG 7 cut(s) 92, 343, 575, 651, 712, 943, 1134
FauNDI CATATG 2 cut(s) 789, 996
FbaI TGATCA 1 cut(s) 66
FblI GTMKAC 1 cut(s) 1060
Fnu4HI GCNGC 4 cut(s) 142, 171, 630, 1067
FokI GGATG 1 cut(s) 110
FriOI GRGCYC 2 cut(s) 369, 611
Fsp4HI GCNGC 4 cut(s) 142, 171, 630, 1067
FspBI CTAG 3 cut(s) 117, 453, 1034
GlaI GCGC 1 cut(s) 222
GluI GCNGC 4 cut(s) 142, 171, 630, 1067
GsuI CTGGAG 1 cut(s) 26
HaeIII GGCC 3 cut(s) 180, 700, 1170
HapII CCGG 2 cut(s) 204, 255
HgaI GACGC 1 cut(s) 176
HhaI GCGC 1 cut(s) 223
Hin1II CATG 7 cut(s) 96, 347, 579, 655, 716, 947, 1138
Hin6I GCGC 1 cut(s) 221
HinP1I GCGC 1 cut(s) 221
HincII GTYRAC 2 cut(s) 385, 1061
HindII GTYRAC 2 cut(s) 385, 1061
HindIII AAGCTT 1 cut(s) 269
HinfI GANTC 6 cut(s) 106, 515, 619, 869, 956, 1139
HpaII CCGG 2 cut(s) 204, 255
HphI GGTGA 3 cut(s) 269, 943, 1040
Hpy166II GTNNAC 5 cut(s) 385, 963, 982, 1031, 1061
Hpy188I TCNGA 3 cut(s) 7, 105, 250
Hpy188III TCNNGA 3 cut(s) 43, 335, 641
Hpy8I GTNNAC 5 cut(s) 385, 963, 982, 1031, 1061
Hpy99I CGWCG 1 cut(s) 1065
HpyAV CCTTC 3 cut(s) 194, 435, 821
HpyCH4III ACNGT 3 cut(s) 218, 757, 979
HpyCH4V TGCA 3 cut(s) 75, 87, 988
HpyF10VI GCNNNNNNNGC 4 cut(s) 138, 268, 480, 500
HpyF3I CTNAG 5 cut(s) 79, 191, 470, 602, 623
Hsp92II CATG 7 cut(s) 96, 347, 579, 655, 716, 947, 1138
HspAI GCGC 1 cut(s) 221
KroI GCCGGC 1 cut(s) 203
KroNI GCCGGC 1 cut(s) 205
Ksp22I TGATCA 1 cut(s) 66
Kzo9I GATC 2 cut(s) 66, 1078
LguI GCTCTTC 1 cut(s) 738
LmnI GCTCC 4 cut(s) 353, 614, 1003, 1023
Lsp1109I GCAGC 3 cut(s) 182, 616, 1053
LweI GCATC 1 cut(s) 810
MaeI CTAG 3 cut(s) 117, 453, 1034
MaeIII GTNAC 3 cut(s) 442, 597, 1127
MalI GATC 2 cut(s) 68, 1080
MbiI CCGCTC 1 cut(s) 1026
MboI GATC 2 cut(s) 66, 1078
MboII GAAGA 5 cut(s) 628, 656, 725, 905, 1103
MflI RGATCY 1 cut(s) 1078
MhlI GDGCHC 3 cut(s) 369, 611, 733
MlsI TGGCCA 1 cut(s) 1170
MluCI AATT 8 cut(s) 691, 770, 800, 907, 917, 968, 1094, 1110
MluNI TGGCCA 1 cut(s) 1170
MlyI GAGTC 2 cut(s) 628, 878
MmeI TCCRAC 2 cut(s) 180, 981
MnlI CCTC 9 cut(s) 39, 50, 90, 146, 186, 191, 574, 757, 859
Mox20I TGGCCA 1 cut(s) 1170
MroNI GCCGGC 1 cut(s) 203
MroXI GAANNNNTTC 1 cut(s) 910
MscI TGGCCA 1 cut(s) 1170
MseI TTAA 5 cut(s) 294, 857, 884, 1083, 1098
MslI CAYNNNNRTG 2 cut(s) 80, 929
Msp20I TGGCCA 1 cut(s) 1170
MspCI CTTAAG 1 cut(s) 1082
MspI CCGG 2 cut(s) 204, 255
MspR9I CCNGG 3 cut(s) 164, 613, 687
Mva1269I GAATGC 1 cut(s) 262
MvaI CCWGG 3 cut(s) 164, 613, 687
MvnI CGCG 1 cut(s) 520
MwoI GCNNNNNNNGC 4 cut(s) 138, 268, 480, 500
NaeI GCCGGC 1 cut(s) 205
NcoI CCATGG 1 cut(s) 92
NdeI CATATG 2 cut(s) 789, 996
NdeII GATC 2 cut(s) 66, 1078
NgoMIV GCCGGC 1 cut(s) 203
NlaIII CATG 7 cut(s) 96, 347, 579, 655, 716, 947, 1138
NlaIV GGNNCC 4 cut(s) 403, 422, 610, 1005
NmuCI GTSAC 1 cut(s) 1127
NspI RCATGY 1 cut(s) 716
OliI CACNNNNGTG 1 cut(s) 80
PaqCI CACCTGC 1 cut(s) 993
PciSI GCTCTTC 1 cut(s) 738
PcsI WCGNNNNNNNCGW 1 cut(s) 207
PctI GAATGC 1 cut(s) 262
PdiI GCCGGC 1 cut(s) 205
PdmI GAANNNNTTC 1 cut(s) 910
PfeI GAWTC 4 cut(s) 106, 515, 956, 1139
PflMI CCANNNNNTGG 1 cut(s) 1000
PfoI TCCNGGA 1 cut(s) 611
PinAI ACCGGT 1 cut(s) 254
PkrI GCNGC 4 cut(s) 143, 172, 631, 1068
PleI GAGTC 2 cut(s) 627, 877
PpsI GAGTC 2 cut(s) 627, 877
PsiI TTATAA 1 cut(s) 666
Psp6I CCWGG 3 cut(s) 162, 611, 685
PspGI CCWGG 3 cut(s) 162, 611, 685
PspN4I GGNNCC 4 cut(s) 403, 422, 610, 1005
PspPI GGNCC 1 cut(s) 698
PsuI RGATCY 1 cut(s) 1078
RsaI GTAC 6 cut(s) 523, 550, 563, 754, 863, 981
RsaNI GTAC 6 cut(s) 522, 549, 562, 753, 862, 980
RseI CAYNNNNRTG 2 cut(s) 80, 929
SalI GTCGAC 1 cut(s) 1059
SapI GCTCTTC 1 cut(s) 738
SaqAI TTAA 5 cut(s) 294, 857, 884, 1083, 1098
SatI GCNGC 4 cut(s) 142, 171, 630, 1067
Sau3AI GATC 2 cut(s) 66, 1078
Sau96I GGNCC 1 cut(s) 698
SchI GAGTC 2 cut(s) 628, 878
ScrFI CCNGG 3 cut(s) 164, 613, 687
SduI GDGCHC 3 cut(s) 369, 611, 733
SfaNI GCATC 1 cut(s) 810
SfcI CTRYAG 3 cut(s) 702, 756, 899
SmiI ATTTAAAT 1 cut(s) 1099
SmiMI CAYNNNNRTG 2 cut(s) 80, 929
SmlI CTYRAG 1 cut(s) 1082
SmoI CTYRAG 1 cut(s) 1082
SpeI ACTAGT 1 cut(s) 1033
Sse9I AATT 8 cut(s) 691, 770, 800, 907, 917, 968, 1094, 1110
SsiI CCGC 3 cut(s) 139, 142, 1026
SspI AATATT 1 cut(s) 1103
SspMI CTAG 3 cut(s) 117, 453, 1034
StyD4I CCNGG 3 cut(s) 162, 611, 685
StyI CCWWGG 2 cut(s) 92, 452
SwaI ATTTAAAT 1 cut(s) 1099
TaaI ACNGT 3 cut(s) 218, 757, 979
TaqI TCGA 2 cut(s) 921, 1060
TasI AATT 8 cut(s) 691, 770, 800, 907, 917, 968, 1094, 1110
TauI GCSGC 1 cut(s) 144
TfiI GAWTC 4 cut(s) 106, 515, 956, 1139
Tru1I TTAA 5 cut(s) 294, 857, 884, 1083, 1098
Tru9I TTAA 5 cut(s) 294, 857, 884, 1083, 1098
TscAI CASTG 4 cut(s) 223, 474, 743, 802
TseFI GTSAC 1 cut(s) 1127
TseI GCWGC 3 cut(s) 170, 629, 1066
Tsp45I GTSAC 1 cut(s) 1127
TspDTI ATGAA 6 cut(s) 112, 640, 763, 776, 950, 1123
TspGWI ACGGA 1 cut(s) 1103
TspRI CASTG 4 cut(s) 223, 474, 743, 802
Van91I CCANNNNNTGG 1 cut(s) 1000
Vha464I CTTAAG 1 cut(s) 1082
XapI RAATTY 4 cut(s) 691, 770, 917, 1094
XceI RCATGY 1 cut(s) 716
XmaJI CCTAGG 1 cut(s) 452
XmiI GTMKAC 1 cut(s) 1060
XmnI GAANNNNTTC 1 cut(s) 910
XspI CTAG 3 cut(s) 117, 453, 1034
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.