Rw5G018000

F-box domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000068
Physical Location & Seq
Reverse (-)
23187249 .. 23188934
1686 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G018000.1

Sequence Viewer

Length: 1125 bp
ATGATAGACTCTTTTCCTGAGGAAATCAGCCATGATATCCTATCCAGACTACCTATTAAGTATTTGATCAGATGCACCTCGGTGAGCAAGCCATTGTTGTCCATTATCAAAAACTCTGGTTTTATTCGCGCCCACCTCAGACGTAGACATGAGACTCTACTTCTACTACATAGCAGGTGCTACAGAGCTTCCACGCATGAGGGAACAGAAGAGGTTTACCGTTTGCATTGTGATAATCCTGCTTTTGATGAACCCGATAAATGGGCGTTTCCCCGTGTGGCTGGCATTTGTGACGGGCTAGTGTGCCTTGCGGATGATTTAATATCTAAAGCTTTAAGCTACATAATATGGAACCCATCAATAAGAAAGGCAGTGATGCTTCCCCGGCCTGGTTTCACCTTCGCCACTCATGGTTCTTTTGAAGATTCTATTGGGTTCGGGTTTGATGCTACGACCAATGACTACAAGGTTGTTCGACTTGTCACTCTTGAGAATCTTGTAGATGAAGATGCGGAAAATCCAACTGTAGCTGAGGTTTATTCACTGGCCACAGGCTCGTGGAGAAGTCTTGGTTCTGTTGGTCTTCCGTGCCAAATATTTTGTATAAGACCGCATGCTTTCTTCAATGGGAACATTCATTGGGTTGTTCATGCTGTTGCTTCCTTCTATTTCATTTTGGCATTTGATCTTGTTAGTGAGTCATTTAGCAAGATATTGATTCCAATTGGTACCAAATTGGGCTTCAATTCTCGAGTTTCTGTTACAGGAGATGGGAAATATCTTGCTTTGTTCACGTGGTATAATGATAATGATATTAGTTATCTTGATATTTGGGTTATGAAAGAGTATTGCCAGCAGGAGTCCTGGACCAAAATGATAACTCTCGCTCCGCAAGGTCCAGAAGGAAGTGTGCGCCCCGAGCCATTTTGTTTTAGAAAGAGCGGTGAAGTATTTTTGGAACTAAGAGAACCATATTTTTATCGTCGATATCAAACATTAGTTTCACTTGACCCTGTCAGTCAACAAATGAACAATGTTGATATTCTTGATTGTGAGTGTTATTCTCTTGATTCTTATGAAGAGAGTCTTGTGTTACTCGATGTGGAAAATGCAGTTTCCTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1 FBA_3

Protein Analysis

374

Amino Acids

42.57

Weight (kDa)

5.26

Isoelectric Point (pI)

39.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 2 - 41 5.5e-07 F-box domain
FBA_1 PF07734 68 - 296 3.1e-25 F-box associated beta propeller domain
FBA_3 PF08268 93 - 353 1.3e-20 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 95 - 290 3.8e-08 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 165
Acc36I ACCTGC 1 cut(s) 165
Acc65I GGTACC 1 cut(s) 728
AccB1I GGYRCC 1 cut(s) 728
AccBSI CCGCTC 1 cut(s) 942
AccI GTMKAC 1 cut(s) 145
AccII CGCG 1 cut(s) 129
AciI CCGC 5 cut(s) 311, 512, 611, 890, 942
AcoI YGGCCR 1 cut(s) 546
AcvI CACGTG 1 cut(s) 795
AfaI GTAC 1 cut(s) 730
AfiI CCNNNNNNNGG 2 cut(s) 261, 389
AgsI TTSAA 3 cut(s) 422, 625, 745
AjnI CCWGG 2 cut(s) 388, 863
AjuI GAANNNNNNNTTGG 4 cut(s) 414, 446, 725, 757
AleI CACNNNNGTG 1 cut(s) 80
AluBI AGCT 4 cut(s) 188, 332, 339, 530
AluI AGCT 4 cut(s) 188, 332, 339, 530
Alw26I GTCTC 1 cut(s) 146
Ama87I CYCGRG 2 cut(s) 750, 917
AoxI GGCC 2 cut(s) 386, 546
Asp718I GGTACC 1 cut(s) 728
AspLEI GCGC 2 cut(s) 131, 915
AspS9I GGNCC 2 cut(s) 867, 896
AsuC2I CCSGG 1 cut(s) 385
AsuHPI GGTGA 3 cut(s) 94, 388, 956
AvaI CYCGRG 2 cut(s) 750, 917
AvaII GGWCC 2 cut(s) 867, 896
AxyI CCTNAGG 1 cut(s) 18
BalI TGGCCA 1 cut(s) 548
BanI GGYRCC 1 cut(s) 728
BauI CACGAG 1 cut(s) 556
BbrPI CACGTG 1 cut(s) 795
BbsI GAAGAC 1 cut(s) 575
BbvCI CCTCAGC 1 cut(s) 531
BccI CCATC 2 cut(s) 364, 764
BciT130I CCWGG 2 cut(s) 390, 865
BclI TGATCA 1 cut(s) 66
BcnI CCSGG 1 cut(s) 385
BcoDI GTCTC 1 cut(s) 146
BfaI CTAG 1 cut(s) 299
BfmI CTRYAG 2 cut(s) 181, 525
BfuAI ACCTGC 1 cut(s) 165
Bme1390I CCNGG 3 cut(s) 385, 390, 865
Bme18I GGWCC 2 cut(s) 867, 896
BmeT110I CYCGRG 2 cut(s) 750, 917
BmgT120I GGNCC 2 cut(s) 867, 896
BmiI GGNNCC 2 cut(s) 353, 730
BmrFI CCNGG 3 cut(s) 385, 390, 865
BmsI GCATC 4 cut(s) 62, 366, 436, 499
BpiI GAAGAC 1 cut(s) 575
Bpu10I CCTNAGC 1 cut(s) 531
BpuEI CTTGAG 1 cut(s) 509
BpuMI CCSGG 1 cut(s) 385
BsaAI YACGTR 1 cut(s) 795
BsaJI CCNNGG 2 cut(s) 78, 383
BsaXI ACNNNNNCTCC 2 cut(s) 871, 901
Bsc4I CCNNNNNNNGG 2 cut(s) 261, 389
Bse1I ACTGG 1 cut(s) 549
Bse21I CCTNAGG 1 cut(s) 18
BseBI CCWGG 2 cut(s) 390, 865
BseDI CCNNGG 2 cut(s) 78, 383
BseGI GGATG 1 cut(s) 319
BseLI CCNNNNNNNGG 2 cut(s) 261, 389
BseMII CTCAG 3 cut(s) 9, 151, 522
BseNI ACTGG 1 cut(s) 549
Bsh1236I CGCG 1 cut(s) 129
BshFI GGCC 2 cut(s) 388, 548
BshNI GGYRCC 1 cut(s) 728
BsiHKCI CYCGRG 2 cut(s) 750, 917
BsiSI CCGG 1 cut(s) 385
BslI CCNNNNNNNGG 2 cut(s) 261, 389
BsmAI GTCTC 1 cut(s) 146
BsnI GGCC 2 cut(s) 388, 548
BsoBI CYCGRG 2 cut(s) 750, 917
Bsp143I GATC 2 cut(s) 66, 685
BspACI CCGC 5 cut(s) 311, 512, 611, 890, 942
BspANI GGCC 2 cut(s) 388, 548
BspCNI CTCAG 3 cut(s) 10, 150, 523
BspFNI CGCG 1 cut(s) 129
BspLI GGNNCC 2 cut(s) 353, 730
BspMI ACCTGC 1 cut(s) 165
BspT107I GGYRCC 1 cut(s) 728
BsrBI CCGCTC 1 cut(s) 942
BsrI ACTGG 1 cut(s) 549
BssECI CCNNGG 2 cut(s) 78, 383
BssMI GATC 2 cut(s) 66, 685
BssSI CACGAG 1 cut(s) 556
Bst2BI CACGAG 1 cut(s) 556
Bst2UI CCWGG 2 cut(s) 390, 865
Bst4CI ACNGT 2 cut(s) 221, 526
Bst6I CTCTTC 2 cut(s) 204, 1074
BstBAI YACGTR 1 cut(s) 795
BstC8I GCNNGC 4 cut(s) 89, 283, 615, 854
BstDEI CTNAG 4 cut(s) 18, 137, 531, 962
BstF5I GGATG 1 cut(s) 319
BstFNI CGCG 1 cut(s) 129
BstHHI GCGC 2 cut(s) 131, 915
BstKTI GATC 2 cut(s) 69, 688
BstMAI GTCTC 1 cut(s) 146
BstMBI GATC 2 cut(s) 66, 685
BstMWI GCNNNNNNNGC 2 cut(s) 385, 919
BstNI CCWGG 2 cut(s) 390, 865
BstNSI RCATGY 1 cut(s) 617
BstSCI CCNGG 3 cut(s) 383, 388, 863
BstSFI CTRYAG 2 cut(s) 181, 525
BstUI CGCG 1 cut(s) 129
BstV2I GAAGAC 1 cut(s) 575
Bsu36I CCTNAGG 1 cut(s) 18
BsuRI GGCC 2 cut(s) 388, 548
BtsCI GGATG 1 cut(s) 319
BtsI GCAGTG 1 cut(s) 378
BtsIMutI CAGTG 2 cut(s) 378, 542
BveI ACCTGC 1 cut(s) 165
Cac8I GCNNGC 4 cut(s) 89, 283, 615, 854
CfoI GCGC 2 cut(s) 131, 915
Cfr13I GGNCC 2 cut(s) 867, 896
Csp6I GTAC 1 cut(s) 729
CviAII CATG 6 cut(s) 32, 149, 197, 410, 614, 650
CviQI GTAC 1 cut(s) 729
DdeI CTNAG 4 cut(s) 18, 137, 531, 962
DpnI GATC 2 cut(s) 68, 687
DpnII GATC 2 cut(s) 66, 685
EaeI YGGCCR 1 cut(s) 546
Eam1104I CTCTTC 2 cut(s) 204, 1074
EarI CTCTTC 2 cut(s) 204, 1074
Eco32I GATATC 2 cut(s) 37, 989
Eco47I GGWCC 2 cut(s) 867, 896
Eco72I CACGTG 1 cut(s) 795
Eco81I CCTNAGG 1 cut(s) 18
Eco88I CYCGRG 2 cut(s) 750, 917
EcoRII CCWGG 2 cut(s) 388, 863
EcoRV GATATC 2 cut(s) 37, 989
FaeI CATG 6 cut(s) 35, 152, 200, 413, 617, 653
FalI AAGNNNNNCTT 2 cut(s) 1071, 1103
FatI CATG 6 cut(s) 31, 148, 196, 409, 613, 649
FbaI TGATCA 1 cut(s) 66
FblI GTMKAC 1 cut(s) 145
FokI GGATG 1 cut(s) 326
FspBI CTAG 1 cut(s) 299
GlaI GCGC 2 cut(s) 130, 914
HaeIII GGCC 2 cut(s) 388, 548
HapII CCGG 1 cut(s) 385
HhaI GCGC 2 cut(s) 131, 915
Hin1II CATG 6 cut(s) 35, 152, 200, 413, 617, 653
Hin6I GCGC 2 cut(s) 129, 913
HinP1I GCGC 2 cut(s) 129, 913
HincII GTYRAC 1 cut(s) 1022
HindII GTYRAC 1 cut(s) 1022
HindIII AAGCTT 1 cut(s) 330
HinfI GANTC 9 cut(s) 8, 154, 425, 493, 698, 718, 860, 1070, 1084
HpaII CCGG 1 cut(s) 385
HphI GGTGA 3 cut(s) 94, 388, 956
Hpy166II GTNNAC 4 cut(s) 146, 217, 792, 1022
Hpy188I TCNGA 2 cut(s) 71, 140
Hpy188III TCNNGA 8 cut(s) 17, 45, 488, 750, 824, 899, 1046, 1067
Hpy8I GTNNAC 4 cut(s) 146, 217, 792, 1022
Hpy99I CGWCG 1 cut(s) 987
HpyAV CCTTC 3 cut(s) 409, 673, 896
HpyCH4III ACNGT 2 cut(s) 221, 526
HpyCH4IV ACGT 2 cut(s) 142, 794
HpyCH4V TGCA 3 cut(s) 75, 226, 1112
HpyF10VI GCNNNNNNNGC 2 cut(s) 385, 919
HpyF3I CTNAG 4 cut(s) 18, 137, 531, 962
HpySE526I ACGT 2 cut(s) 142, 794
Hsp92II CATG 6 cut(s) 35, 152, 200, 413, 617, 653
HspAI GCGC 2 cut(s) 129, 913
KpnI GGTACC 1 cut(s) 732
Ksp22I TGATCA 1 cut(s) 66
Kzo9I GATC 2 cut(s) 66, 685
LmnI GCTCC 1 cut(s) 892
LweI GCATC 4 cut(s) 62, 366, 436, 499
MaeI CTAG 1 cut(s) 299
MaeII ACGT 2 cut(s) 142, 794
MaeIII GTNAC 4 cut(s) 290, 481, 760, 1092
MalI GATC 2 cut(s) 68, 687
MbiI CCGCTC 1 cut(s) 942
MboI GATC 2 cut(s) 66, 685
MboII GAAGA 6 cut(s) 221, 434, 518, 575, 613, 1091
MfeI CAATTG 1 cut(s) 723
MlsI TGGCCA 1 cut(s) 548
MluCI AATT 3 cut(s) 723, 734, 745
MluNI TGGCCA 1 cut(s) 548
MlyI GAGTC 5 cut(s) 2, 148, 707, 869, 1093
MmeI TCCRAC 1 cut(s) 545
MnlI CCTC 6 cut(s) 13, 88, 146, 193, 205, 526
Mox20I TGGCCA 1 cut(s) 548
MscI TGGCCA 1 cut(s) 548
MseI TTAA 3 cut(s) 57, 320, 335
MslI CAYNNNNRTG 1 cut(s) 80
Msp20I TGGCCA 1 cut(s) 548
MspI CCGG 1 cut(s) 385
MspR9I CCNGG 3 cut(s) 385, 390, 865
MunI CAATTG 1 cut(s) 723
MvaI CCWGG 2 cut(s) 390, 865
MvnI CGCG 1 cut(s) 129
MwoI GCNNNNNNNGC 2 cut(s) 385, 919
NciI CCSGG 1 cut(s) 385
NdeII GATC 2 cut(s) 66, 685
NlaIII CATG 6 cut(s) 35, 152, 200, 413, 617, 653
NlaIV GGNNCC 2 cut(s) 353, 730
NmuCI GTSAC 2 cut(s) 290, 481
NspI RCATGY 1 cut(s) 617
OliI CACNNNNGTG 1 cut(s) 80
PaeI GCATGC 1 cut(s) 617
PaeR7I CTCGAG 1 cut(s) 750
PaqCI CACCTGC 1 cut(s) 165
PfeI GAWTC 4 cut(s) 425, 493, 718, 1070
PflFI GACNNNGTC 1 cut(s) 1013
PfoI TCCNGGA 1 cut(s) 863
PleI GAGTC 5 cut(s) 2, 148, 706, 868, 1092
PmaCI CACGTG 1 cut(s) 795
PmlI CACGTG 1 cut(s) 795
PpsI GAGTC 5 cut(s) 2, 148, 706, 868, 1092
Ppu21I YACGTR 1 cut(s) 795
Psp6I CCWGG 2 cut(s) 388, 863
PspCI CACGTG 1 cut(s) 795
PspGI CCWGG 2 cut(s) 388, 863
PspN4I GGNNCC 2 cut(s) 353, 730
PspPI GGNCC 2 cut(s) 867, 896
PsyI GACNNNGTC 1 cut(s) 1013
RsaI GTAC 1 cut(s) 730
RsaNI GTAC 1 cut(s) 729
RseI CAYNNNNRTG 1 cut(s) 80
SaqAI TTAA 3 cut(s) 57, 320, 335
Sau3AI GATC 2 cut(s) 66, 685
Sau96I GGNCC 2 cut(s) 867, 896
SchI GAGTC 5 cut(s) 2, 148, 707, 869, 1093
ScrFI CCNGG 3 cut(s) 385, 390, 865
SfaNI GCATC 4 cut(s) 62, 366, 436, 499
SfcI CTRYAG 2 cut(s) 181, 525
Sfr274I CTCGAG 1 cut(s) 750
SinI GGWCC 2 cut(s) 867, 896
SlaI CTCGAG 1 cut(s) 750
SmiMI CAYNNNNRTG 1 cut(s) 80
SmlI CTYRAG 2 cut(s) 488, 750
SmoI CTYRAG 2 cut(s) 488, 750
SphI GCATGC 1 cut(s) 617
Sse9I AATT 3 cut(s) 723, 734, 745
SsiI CCGC 5 cut(s) 311, 512, 611, 890, 942
SspI AATATT 1 cut(s) 597
SspMI CTAG 1 cut(s) 299
StyD4I CCNGG 3 cut(s) 383, 388, 863
TaaI ACNGT 2 cut(s) 221, 526
TaiI ACGT 2 cut(s) 145, 797
TaqI TCGA 4 cut(s) 475, 751, 985, 1098
TasI AATT 3 cut(s) 723, 734, 745
TfiI GAWTC 4 cut(s) 425, 493, 718, 1070
Tru1I TTAA 3 cut(s) 57, 320, 335
Tru9I TTAA 3 cut(s) 57, 320, 335
TscAI CASTG 2 cut(s) 378, 549
TseFI GTSAC 2 cut(s) 290, 481
Tsp45I GTSAC 2 cut(s) 290, 481
TspDTI ATGAA 8 cut(s) 264, 519, 626, 638, 661, 854, 1043, 1092
TspGWI ACGGA 1 cut(s) 576
TspRI CASTG 2 cut(s) 378, 549
Tth111I GACNNNGTC 1 cut(s) 1013
VpaK11BI GGWCC 2 cut(s) 867, 896
XceI RCATGY 1 cut(s) 617
XhoI CTCGAG 1 cut(s) 750
XmiI GTMKAC 1 cut(s) 145
XspI CTAG 1 cut(s) 299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.