Rw6G023850

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000068
Physical Location & Seq
Reverse (-)
46515956 .. 46517152
1197 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G023850.1

Sequence Viewer

Length: 1197 bp
ATGTTAGCCAAAACAAAAAAATTAAAGACCGCGACATCCATGGAAGCCCTTCCTGAAGAGATCATACATGTAATCTTCCTGAGGTTACCCATCAAATCTTTACTCAAATGTACAGCAGTAGGCAAGACATGGAACTCTATAATCTCAACCTCTAGTTTCATCGACACCCACCTCCACCTCAACTGCAGAGACGGCCAACTCCTCTTGATACAGGCTTTTTCATCACCGGCAGATAGGAGGGAGCCTTTCTCGTTGCATCGAGATAACCCTTCGTTCGATGAGTATACCAAGCTTAGAAATCCATTCTTAGCTTACGATAGGACACAAGCTGCTATCTCCAAAAAAAGATCAATAGCTTTAGGTAGTGAGCCTATCAATGTGGTCGGGACTTGTAACGGGCTGGTATGCCTTGTTGCTCATGACTTTACTGTGTTAATTTGGAACCCTAGTATTCGAAAGTTCGTGGTTTTGGCCAGGCCTAGTGTTACCTTCATCAGGGGTGGTAACCCTAGAATAAGTTATGCCTTCGGTTATGATTCGTCCACCAATGACTATAAGGTTCTGAGAACTGTGAGTTATGTTCAGGGAGCTCGTTCATGTGAAGTTGAGATTTGGTCATTGGCCCGTGGCTCTTGGAAGAGCCTAACTGCTTCCATTGCCATTCCTGGTGACGACCTCTGTTATCCAAAAGCTTTTCTTCATGACACTCATGCTTTTGTCAATGGTGCTCTGCATTGGTTTCATCAGTATAAGATGATAAACTACCACCATTCCATTGTTTCCTTTGATATTTCAAGTGAATCATTTGGCGAAATGACAATGCCTGCATTCTGGGGAAATAGAGAGATTTGCTTAATTTCAAGATACAGGGATTCCCTTGCTTTCTTTGAACGAGAATTTACTGGTGTATTTCGTCTTAGCATGTGGGTCATGGAAGAGTATGGTGTGGCAAACTCCTGCACTAATATTTTCACTATGGACTTCCATCACATAACATATCCATATCCACGGCCGCTTTGGTTCAGAAACAGTGGTAATGTAGTGCTCGAGGGCATTCAGGGAGTGCTGAAATGGGTGGATTCTAAGACCAAAAGCACTACTGATTTTCGAATCAATGGGTATGTGTCTTACGACTTTATGGATTATTTTGTAGAAAGCCTTGTATTACTAGACAAACCCAATGCTATTTCATACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

398

Amino Acids

45.46

Weight (kDa)

8.65

Isoelectric Point (pI)

34.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 15 - 51 5.2e-07 F-box-like
F-box PF00646 16 - 53 1e-05 F-box domain
FBA_3 PF08268 123 - 325 5.4e-22 F-box associated beta propeller domain
FBA_1 PF07734 124 - 364 5.4e-23 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 284
AccII CGCG 1 cut(s) 32
AciI CCGC 2 cut(s) 30, 1013
AcoI YGGCCR 3 cut(s) 193, 471, 1010
AcsI RAATTY 1 cut(s) 896
AcuI CTGAAG 1 cut(s) 75
AfaI GTAC 1 cut(s) 112
AfiI CCNNNNNNNGG 1 cut(s) 495
AflIII ACRYGT 1 cut(s) 67
AgsI TTSAA 3 cut(s) 795, 861, 890
AjnI CCWGG 2 cut(s) 473, 664
AluBI AGCT 6 cut(s) 292, 311, 329, 356, 590, 692
AluI AGCT 6 cut(s) 292, 311, 329, 356, 590, 692
Alw21I GWGCWC 3 cut(s) 592, 730, 1047
Alw26I GTCTC 1 cut(s) 183
Ama87I CYCGRG 1 cut(s) 1046
AoxI GGCC 5 cut(s) 193, 471, 476, 621, 1010
ApeKI GCWGC 1 cut(s) 329
ApoI RAATTY 1 cut(s) 896
Asp700I GAANNNNTTC 1 cut(s) 48
AspS9I GGNCC 1 cut(s) 622
AsuHPI GGTGA 2 cut(s) 216, 680
AsuII TTCGAA 2 cut(s) 454, 1108
AvaI CYCGRG 1 cut(s) 1046
AxyI CCTNAGG 1 cut(s) 80
BalI TGGCCA 1 cut(s) 473
BanII GRGCYC 1 cut(s) 592
BarI GAAGNNNNNNTAC 2 cut(s) 48, 80
Bbv12I GWGCWC 3 cut(s) 592, 730, 1047
BbvI GCAGC 1 cut(s) 316
BccI CCATC 2 cut(s) 98, 993
BceAI ACGGC 2 cut(s) 208, 1025
BciT130I CCWGG 2 cut(s) 475, 666
BcoDI GTCTC 1 cut(s) 183
BfaI CTAG 5 cut(s) 153, 447, 480, 510, 1169
BfmI CTRYAG 1 cut(s) 184
BisI GCNGC 2 cut(s) 330, 1013
BlsI GCNGC 2 cut(s) 331, 1014
Bme1390I CCNGG 2 cut(s) 475, 666
BmeT110I CYCGRG 1 cut(s) 1046
BmgT120I GGNCC 1 cut(s) 622
BmiI GGNNCC 2 cut(s) 243, 443
BmrFI CCNGG 2 cut(s) 475, 666
BmsI GCATC 1 cut(s) 265
BplI GAGNNNNNCTC 2 cut(s) 233, 265
Bpu14I TTCGAA 2 cut(s) 454, 1108
BsaJI CCNNGG 3 cut(s) 39, 625, 1007
Bsc4I CCNNNNNNNGG 1 cut(s) 495
Bse118I RCCGGY 1 cut(s) 226
Bse1I ACTGG 1 cut(s) 907
Bse21I CCTNAGG 1 cut(s) 80
Bse3DI GCAATG 1 cut(s) 654
BseBI CCWGG 2 cut(s) 475, 666
BseDI CCNNGG 3 cut(s) 39, 625, 1007
BseGI GGATG 1 cut(s) 35
BseLI CCNNNNNNNGG 1 cut(s) 495
BseMI GCAATG 1 cut(s) 654
BseMII CTCAG 2 cut(s) 71, 554
BseNI ACTGG 1 cut(s) 907
BseRI GAGGAG 1 cut(s) 191
BseX3I CGGCCG 1 cut(s) 1010
BseXI GCAGC 1 cut(s) 316
BsgI GTGCAG 1 cut(s) 943
Bsh1236I CGCG 1 cut(s) 32
Bsh1285I CGRYCG 1 cut(s) 1013
BshFI GGCC 5 cut(s) 195, 473, 478, 623, 1012
BsiEI CGRYCG 1 cut(s) 1013
BsiHKAI GWGCWC 3 cut(s) 592, 730, 1047
BsiHKCI CYCGRG 1 cut(s) 1046
BsiSI CCGG 1 cut(s) 227
BslFI GGGAC 1 cut(s) 400
BslI CCNNNNNNNGG 1 cut(s) 495
BsmAI GTCTC 1 cut(s) 183
BsmBI CGTCTC 1 cut(s) 183
BsmFI GGGAC 1 cut(s) 400
BsmI GAATGC 2 cut(s) 827, 1053
BsnI GGCC 5 cut(s) 195, 473, 478, 623, 1012
BsoBI CYCGRG 1 cut(s) 1046
Bsp119I TTCGAA 2 cut(s) 454, 1108
Bsp1286I GDGCHC 3 cut(s) 592, 730, 1047
Bsp1407I TGTACA 1 cut(s) 110
Bsp143I GATC 2 cut(s) 60, 347
Bsp19I CCATGG 1 cut(s) 39
BspACI CCGC 2 cut(s) 30, 1013
BspANI GGCC 5 cut(s) 195, 473, 478, 623, 1012
BspCNI CTCAG 2 cut(s) 72, 555
BspFNI CGCG 1 cut(s) 32
BspHI TCATGA 2 cut(s) 418, 700
BspLI GGNNCC 2 cut(s) 243, 443
BspMAI CTGCAG 1 cut(s) 188
BspQI GCTCTTC 1 cut(s) 632
BspT104I TTCGAA 2 cut(s) 454, 1108
BsrDI GCAATG 1 cut(s) 654
BsrFI RCCGGY 1 cut(s) 226
BsrGI TGTACA 1 cut(s) 110
BsrI ACTGG 1 cut(s) 907
BssAI RCCGGY 1 cut(s) 226
BssECI CCNNGG 3 cut(s) 39, 625, 1007
BssMI GATC 2 cut(s) 60, 347
BssNAI GTATAC 1 cut(s) 285
BssT1I CCWWGG 1 cut(s) 39
Bst1107I GTATAC 1 cut(s) 285
Bst2UI CCWGG 2 cut(s) 475, 666
Bst4CI ACNGT 3 cut(s) 430, 571, 1031
Bst6I CTCTTC 3 cut(s) 51, 632, 930
BstAUI TGTACA 1 cut(s) 110
BstBI TTCGAA 2 cut(s) 454, 1108
BstC8I GCNNGC 1 cut(s) 825
BstDEI CTNAG 6 cut(s) 80, 293, 307, 563, 917, 1083
BstDSI CCRYGG 3 cut(s) 39, 625, 1007
BstEII GGTNACC 2 cut(s) 84, 503
BstENI CCTNNNNNAGG 1 cut(s) 493
BstF5I GGATG 1 cut(s) 35
BstFNI CGCG 1 cut(s) 32
BstKTI GATC 2 cut(s) 63, 350
BstMAI GTCTC 1 cut(s) 183
BstMBI GATC 2 cut(s) 60, 347
BstMCI CGRYCG 1 cut(s) 1013
BstMWI GCNNNNNNNGC 2 cut(s) 192, 656
BstNI CCWGG 2 cut(s) 475, 666
BstNSI RCATGY 2 cut(s) 71, 925
BstPI GGTNACC 2 cut(s) 84, 503
BstSCI CCNGG 2 cut(s) 473, 664
BstSFI CTRYAG 1 cut(s) 184
BstUI CGCG 1 cut(s) 32
BstV1I GCAGC 1 cut(s) 316
BstZ17I GTATAC 1 cut(s) 285
BstZI CGGCCG 1 cut(s) 1010
Bsu36I CCTNAGG 1 cut(s) 80
BsuRI GGCC 5 cut(s) 195, 473, 478, 623, 1012
BtgI CCRYGG 3 cut(s) 39, 625, 1007
BtsCI GGATG 1 cut(s) 35
BtsIMutI CAGTG 1 cut(s) 1036
Cac8I GCNNGC 1 cut(s) 825
CciI TCATGA 2 cut(s) 418, 700
Cfr10I RCCGGY 1 cut(s) 226
Cfr13I GGNCC 1 cut(s) 622
Csp6I GTAC 1 cut(s) 111
CviAII CATG 9 cut(s) 40, 68, 129, 419, 597, 701, 710, 922, 931
CviQI GTAC 1 cut(s) 111
DdeI CTNAG 6 cut(s) 80, 293, 307, 563, 917, 1083
DpnI GATC 2 cut(s) 62, 349
DpnII GATC 2 cut(s) 60, 347
EaeI YGGCCR 3 cut(s) 193, 471, 1010
EagI CGGCCG 1 cut(s) 1010
Eam1104I CTCTTC 3 cut(s) 51, 632, 930
EarI CTCTTC 3 cut(s) 51, 632, 930
Ecl136II GAGCTC 1 cut(s) 590
EclXI CGGCCG 1 cut(s) 1010
Eco130I CCWWGG 1 cut(s) 39
Eco147I AGGCCT 1 cut(s) 478
Eco24I GRGCYC 1 cut(s) 592
Eco52I CGGCCG 1 cut(s) 1010
Eco53kI GAGCTC 1 cut(s) 590
Eco57I CTGAAG 1 cut(s) 75
Eco81I CCTNAGG 1 cut(s) 80
Eco88I CYCGRG 1 cut(s) 1046
Eco91I GGTNACC 2 cut(s) 84, 503
EcoICRI GAGCTC 1 cut(s) 590
EcoNI CCTNNNNNAGG 1 cut(s) 493
EcoO65I GGTNACC 2 cut(s) 84, 503
EcoRII CCWGG 2 cut(s) 473, 664
EcoT14I CCWWGG 1 cut(s) 39
EcoT38I GRGCYC 1 cut(s) 592
ErhI CCWWGG 1 cut(s) 39
Esp3I CGTCTC 1 cut(s) 183
FaeI CATG 9 cut(s) 43, 71, 132, 422, 600, 704, 713, 925, 934
FalI AAGNNNNNCTT 2 cut(s) 681, 713
FaqI GGGAC 1 cut(s) 400
FatI CATG 9 cut(s) 39, 67, 128, 418, 596, 700, 709, 921, 930
FblI GTMKAC 1 cut(s) 284
Fnu4HI GCNGC 2 cut(s) 330, 1013
FokI GGATG 1 cut(s) 22
FriOI GRGCYC 1 cut(s) 592
Fsp4HI GCNGC 2 cut(s) 330, 1013
FspBI CTAG 5 cut(s) 153, 447, 480, 510, 1169
GluI GCNGC 2 cut(s) 330, 1013
HaeIII GGCC 5 cut(s) 195, 473, 478, 623, 1012
HapII CCGG 1 cut(s) 227
Hin1II CATG 9 cut(s) 43, 71, 132, 422, 600, 704, 713, 925, 934
HindIII AAGCTT 2 cut(s) 290, 690
HinfI GANTC 5 cut(s) 536, 800, 872, 1079, 1110
HpaII CCGG 1 cut(s) 227
HphI GGTGA 2 cut(s) 216, 680
Hpy166II GTNNAC 2 cut(s) 285, 543
Hpy188I TCNGA 2 cut(s) 564, 1025
Hpy188III TCNNGA 8 cut(s) 53, 79, 205, 260, 385, 419, 701, 861
Hpy8I GTNNAC 2 cut(s) 285, 543
HpyAV CCTTC 4 cut(s) 59, 279, 499, 535
HpyCH4III ACNGT 3 cut(s) 430, 571, 1031
HpyCH4V TGCA 5 cut(s) 186, 256, 733, 827, 960
HpyF10VI GCNNNNNNNGC 2 cut(s) 192, 656
HpyF3I CTNAG 6 cut(s) 80, 293, 307, 563, 917, 1083
Hsp92II CATG 9 cut(s) 43, 71, 132, 422, 600, 704, 713, 925, 934
Kzo9I GATC 2 cut(s) 60, 347
LguI GCTCTTC 1 cut(s) 632
LmnI GCTCC 2 cut(s) 241, 587
Lsp1109I GCAGC 1 cut(s) 316
LweI GCATC 1 cut(s) 265
MaeI CTAG 5 cut(s) 153, 447, 480, 510, 1169
MaeIII GTNAC 5 cut(s) 84, 392, 484, 503, 668
MalI GATC 2 cut(s) 62, 349
MboI GATC 2 cut(s) 60, 347
MboII GAAGA 5 cut(s) 67, 68, 649, 689, 947
MhlI GDGCHC 3 cut(s) 592, 730, 1047
MlsI TGGCCA 1 cut(s) 473
MluCI AATT 4 cut(s) 20, 435, 855, 896
MluNI TGGCCA 1 cut(s) 473
MnlI CCTC 8 cut(s) 75, 160, 182, 188, 212, 231, 686, 1042
Mox20I TGGCCA 1 cut(s) 473
MroXI GAANNNNTTC 1 cut(s) 48
MscI TGGCCA 1 cut(s) 473
MseI TTAA 3 cut(s) 23, 434, 854
Msp20I TGGCCA 1 cut(s) 473
MspI CCGG 1 cut(s) 227
MspR9I CCNGG 2 cut(s) 475, 666
Mva1269I GAATGC 2 cut(s) 827, 1053
MvaI CCWGG 2 cut(s) 475, 666
MvnI CGCG 1 cut(s) 32
MwoI GCNNNNNNNGC 2 cut(s) 192, 656
NcoI CCATGG 1 cut(s) 39
NdeII GATC 2 cut(s) 60, 347
NlaIII CATG 9 cut(s) 43, 71, 132, 422, 600, 704, 713, 925, 934
NlaIV GGNNCC 2 cut(s) 243, 443
NmuCI GTSAC 1 cut(s) 668
NspI RCATGY 2 cut(s) 71, 925
NspV TTCGAA 2 cut(s) 454, 1108
PaeR7I CTCGAG 1 cut(s) 1046
PagI TCATGA 2 cut(s) 418, 700
PceI AGGCCT 1 cut(s) 478
PciI ACATGT 1 cut(s) 67
PciSI GCTCTTC 1 cut(s) 632
PctI GAATGC 2 cut(s) 827, 1053
PdmI GAANNNNTTC 1 cut(s) 48
PfeI GAWTC 5 cut(s) 536, 800, 872, 1079, 1110
PkrI GCNGC 2 cut(s) 331, 1014
PscI ACATGT 1 cut(s) 67
Psp124BI GAGCTC 1 cut(s) 592
Psp6I CCWGG 2 cut(s) 473, 664
PspEI GGTNACC 2 cut(s) 84, 503
PspGI CCWGG 2 cut(s) 473, 664
PspN4I GGNNCC 2 cut(s) 243, 443
PspPI GGNCC 1 cut(s) 622
PspXI VCTCGAGB 1 cut(s) 1046
PstI CTGCAG 1 cut(s) 188
RsaI GTAC 1 cut(s) 112
RsaNI GTAC 1 cut(s) 111
SacI GAGCTC 1 cut(s) 592
SapI GCTCTTC 1 cut(s) 632
SaqAI TTAA 3 cut(s) 23, 434, 854
SatI GCNGC 2 cut(s) 330, 1013
Sau3AI GATC 2 cut(s) 60, 347
Sau96I GGNCC 1 cut(s) 622
ScrFI CCNGG 2 cut(s) 475, 666
SduI GDGCHC 3 cut(s) 592, 730, 1047
SfaNI GCATC 1 cut(s) 265
SfcI CTRYAG 1 cut(s) 184
Sfr274I CTCGAG 1 cut(s) 1046
SfuI TTCGAA 2 cut(s) 454, 1108
SlaI CTCGAG 1 cut(s) 1046
SmlI CTYRAG 1 cut(s) 1046
SmoI CTYRAG 1 cut(s) 1046
Sse9I AATT 4 cut(s) 20, 435, 855, 896
SseBI AGGCCT 1 cut(s) 478
SsiI CCGC 2 cut(s) 30, 1013
SspI AATATT 1 cut(s) 967
SspMI CTAG 5 cut(s) 153, 447, 480, 510, 1169
SstI GAGCTC 1 cut(s) 592
StuI AGGCCT 1 cut(s) 478
StyD4I CCNGG 2 cut(s) 473, 664
StyI CCWWGG 1 cut(s) 39
TaaI ACNGT 3 cut(s) 430, 571, 1031
TaqI TCGA 6 cut(s) 162, 259, 276, 454, 1047, 1108
TasI AATT 4 cut(s) 20, 435, 855, 896
TatI WGTACW 1 cut(s) 110
TauI GCSGC 1 cut(s) 1015
TfiI GAWTC 5 cut(s) 536, 800, 872, 1079, 1110
Tru1I TTAA 3 cut(s) 23, 434, 854
Tru9I TTAA 3 cut(s) 23, 434, 854
TscAI CASTG 1 cut(s) 1036
TseFI GTSAC 1 cut(s) 668
TseI GCWGC 1 cut(s) 329
Tsp45I GTSAC 1 cut(s) 668
TspDTI ATGAA 7 cut(s) 148, 210, 481, 585, 689, 731, 1179
TspRI CASTG 1 cut(s) 1036
XagI CCTNNNNNAGG 1 cut(s) 493
XapI RAATTY 1 cut(s) 896
XceI RCATGY 2 cut(s) 71, 925
XcmI CCANNNNNNNNNTGG 1 cut(s) 1014
XhoI CTCGAG 1 cut(s) 1046
XmiI GTMKAC 1 cut(s) 284
XmnI GAANNNNTTC 1 cut(s) 48
XspI CTAG 5 cut(s) 153, 447, 480, 510, 1169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.