FvH4_3g39330

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000068
Physical Location & Seq
Reverse (-)
33473017 .. 33476498
3482 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g39330.t1

Sequence Viewer

Length: 1236 bp
ATGCTCGACTACTTACCTTTGGAAATCAGTCAAAACATCCTATTTAAACTATCCCTCCAGTGTCTGATCATATGCACATCTGTCTGCAAGTCATGGAAATCCATGATTAAAAACTCGAATTTCATCCAAGACCACCTCACTTTCAAAAACAAGTATGGACCTCCCCTTCTACTCCTCCATTGTGCTACAAGAAAGAGGTGCGACGCCTTCAGCAACAAACTTATCAAGGAGGAAATGGCAGAGTTTTACTCTCTTCATTATGATAACCATGATTTTTCTAAGTACTACGACGTCGAAGTTCCAATTGCTGTTGACAACGGAATGCCATGTCTCCATGTGGTGGGCACTTGTAACGGGCTCGTATGCATCGCCGATGATTTAGCGGTTGAAGCTAACAAGTTCATCATTTGCAACCCTTTGATAAGAAAGTCAGTGACCCTTCCTGTGCCAAATTTACGAATAGAGAATTATGATCACACAGGGAGTCCTCTAAAGTATAATGTCTCTATTGGGTTCGGGTATGATGCCGAGACCAATGACTACAAGGTGGTAAGACTAGTCACACTTTTGAATGGAGCAAGTCCTACTGTGGCTGAGGTTTATTCACTAGCCACTGGCTCATGGAGTCCTCGGCGTCGCGTTAATGGCGTGTCGGAAATGGAAGCATGCACACCCCAGGCTTTCGTTAATGGGATTCTTCATTGGCTCGCTATATATGAGGCTGAAGATGGTAACAGTTACTACTTCATTTTGACATTTGATGTGCACACCGAGTCATTTTCTAAGCTAATGATGCCGGAGATAGTCCCATCGAGAGCATCAGCGAAACTGCAAGTGTCTGTTTCAAGTGATGGGAAATCCATTGCTCTATTCTCCAGAAATTTTGTTGATACCGTTTTTGATCGTTTTCTTGATATCTGGATAATGCAAGAGTATGGAGTGCATGAGTCTTGGACAATATGGACAACACTTCGAGCAATAGGTCCTTCAGAATCGAGATCCCTACTCCCCAAGGCATTATGTTTCAGGGTTAACGGTGAGATAGTGTCGGAAATATTCGACGACAACGTTTGCCGGTGGTTCTGGCATTTATATTGTGTGGGACATCGATTATATTCGATACATCCTTCGGGTTGGTGGAGAAATCTGGAATACTCCGGATTCAGATATTACACCGTGAATTCTTACAAAGAGAGCCTAGTCTTGCTTGACATGGACAATGTAGTGTCATACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

412

Amino Acids

47.06

Weight (kDa)

5.96

Isoelectric Point (pI)

44.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 3 - 38 4.3e-06 F-box-like
F-box PF00646 5 - 42 3.1e-07 F-box domain
FBA_3 PF08268 81 - 319 2.2e-18 F-box associated beta propeller domain
FBA_1 PF07734 112 - 326 1.1e-22 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 294
AccB7I CCANNNNNTGG 1 cut(s) 340
AccII CGCG 1 cut(s) 639
AccIII TCCGGA 1 cut(s) 1157
AciI CCGC 1 cut(s) 383
AclI AACGTT 1 cut(s) 1068
AclWI GGATC 1 cut(s) 993
AcsI RAATTY 4 cut(s) 118, 451, 880, 1180
AcuI CTGAAG 3 cut(s) 193, 744, 972
AcyI GRCGYC 3 cut(s) 204, 291, 634
AfaI GTAC 1 cut(s) 284
AfiI CCNNNNNNNGG 1 cut(s) 340
AgsI TTSAA 4 cut(s) 145, 389, 571, 846
AhlI ACTAGT 1 cut(s) 556
AjnI CCWGG 1 cut(s) 675
AluBI AGCT 2 cut(s) 392, 787
AluI AGCT 2 cut(s) 392, 787
Alw21I GWGCWC 1 cut(s) 768
Alw26I GTCTC 3 cut(s) 335, 508, 524
Alw44I GTGCAC 1 cut(s) 764
AlwI GGATC 1 cut(s) 993
AlwNI CAGNNNCTG 1 cut(s) 64
Aor13HI TCCGGA 1 cut(s) 1157
ApaLI GTGCAC 1 cut(s) 764
ApoI RAATTY 4 cut(s) 118, 451, 880, 1180
AspS9I GGNCC 2 cut(s) 158, 983
AsuHPI GGTGA 1 cut(s) 1049
AvaII GGWCC 2 cut(s) 158, 983
BaeGI GKGCMC 2 cut(s) 347, 768
BanII GRGCYC 1 cut(s) 360
Bbv12I GWGCWC 1 cut(s) 768
BbvCI CCTCAGC 1 cut(s) 594
BccI CCATC 3 cut(s) 722, 817, 845
BciT130I CCWGG 1 cut(s) 677
BclI TGATCA 2 cut(s) 66, 472
BcoDI GTCTC 3 cut(s) 335, 508, 524
BcuI ACTAGT 1 cut(s) 556
BfaI CTAG 3 cut(s) 557, 608, 1199
BmcAI AGTACT 1 cut(s) 284
Bme1390I CCNGG 1 cut(s) 677
Bme18I GGWCC 2 cut(s) 158, 983
BmgT120I GGNCC 2 cut(s) 158, 983
BmrFI CCNGG 1 cut(s) 677
BmsI GCATC 4 cut(s) 375, 514, 783, 827
BplI GAGNNNNNCTC 2 cut(s) 233, 265
BpmI CTGGAG 2 cut(s) 41, 859
Bpu10I CCTNAGC 1 cut(s) 594
Bsa29I ATCGAT 1 cut(s) 1108
BsaHI GRCGYC 3 cut(s) 204, 291, 634
BsaI GGTCTC 1 cut(s) 524
BsaJI CCNNGG 3 cut(s) 629, 675, 1011
BsaWI WCCGGW 1 cut(s) 1157
BsaXI ACNNNNNCTCC 2 cut(s) 39, 69
Bsc4I CCNNNNNNNGG 1 cut(s) 340
Bse118I RCCGGY 1 cut(s) 1074
Bse1I ACTGG 2 cut(s) 58, 619
Bse3DI GCAATG 1 cut(s) 861
BseAI TCCGGA 1 cut(s) 1157
BseBI CCWGG 1 cut(s) 677
BseCI ATCGAT 1 cut(s) 1108
BseDI CCNNGG 3 cut(s) 629, 675, 1011
BseGI GGATG 3 cut(s) 36, 123, 1123
BseLI CCNNNNNNNGG 1 cut(s) 340
BseMI GCAATG 1 cut(s) 861
BseMII CTCAG 1 cut(s) 585
BseNI ACTGG 2 cut(s) 58, 619
BseRI GAGGAG 1 cut(s) 164
BseSI GKGCMC 2 cut(s) 347, 768
Bsh1236I CGCG 1 cut(s) 639
BshVI ATCGAT 1 cut(s) 1108
BsiHKAI GWGCWC 1 cut(s) 768
BsiSI CCGG 3 cut(s) 797, 1075, 1158
BslFI GGGAC 2 cut(s) 791, 1116
BslI CCNNNNNNNGG 1 cut(s) 340
BsmAI GTCTC 3 cut(s) 335, 508, 524
BsmFI GGGAC 2 cut(s) 791, 1116
BsmI GAATGC 1 cut(s) 327
Bso31I GGTCTC 1 cut(s) 524
Bsp1286I GDGCHC 3 cut(s) 347, 360, 768
Bsp13I TCCGGA 1 cut(s) 1157
Bsp143I GATC 4 cut(s) 66, 472, 901, 998
BspACI CCGC 1 cut(s) 383
BspCNI CTCAG 1 cut(s) 586
BspDI ATCGAT 1 cut(s) 1108
BspEI TCCGGA 1 cut(s) 1157
BspFNI CGCG 1 cut(s) 639
BspPI GGATC 1 cut(s) 993
BspTNI GGTCTC 1 cut(s) 524
BsrDI GCAATG 1 cut(s) 861
BsrFI RCCGGY 1 cut(s) 1074
BsrI ACTGG 2 cut(s) 58, 619
BssAI RCCGGY 1 cut(s) 1074
BssECI CCNNGG 3 cut(s) 629, 675, 1011
BssMI GATC 4 cut(s) 66, 472, 901, 998
BssNI GRCGYC 3 cut(s) 204, 291, 634
BssT1I CCWWGG 1 cut(s) 1011
Bst2UI CCWGG 1 cut(s) 677
Bst4CI ACNGT 5 cut(s) 589, 737, 895, 1037, 1177
Bst6I CTCTTC 1 cut(s) 258
BstACI GRCGYC 3 cut(s) 204, 291, 634
BstC8I GCNNGC 2 cut(s) 667, 708
BstDEI CTNAG 3 cut(s) 279, 594, 783
BstF5I GGATG 3 cut(s) 36, 123, 1123
BstFNI CGCG 1 cut(s) 639
BstKTI GATC 4 cut(s) 69, 475, 904, 1001
BstMAI GTCTC 3 cut(s) 335, 508, 524
BstMBI GATC 4 cut(s) 66, 472, 901, 998
BstMWI GCNNNNNNNGC 3 cut(s) 389, 645, 793
BstNI CCWGG 1 cut(s) 677
BstNSI RCATGY 1 cut(s) 669
BstSCI CCNGG 1 cut(s) 675
BstSLI GKGCMC 2 cut(s) 347, 768
BstUI CGCG 1 cut(s) 639
BstX2I RGATCY 1 cut(s) 998
BstYI RGATCY 1 cut(s) 998
Bsu15I ATCGAT 1 cut(s) 1108
BsuTUI ATCGAT 1 cut(s) 1108
BtgZI GCGATG 1 cut(s) 352
BtsCI GGATG 3 cut(s) 36, 123, 1123
BtsIMutI CAGTG 3 cut(s) 65, 438, 612
Cac8I GCNNGC 2 cut(s) 667, 708
CaiI CAGNNNCTG 1 cut(s) 64
Cfr10I RCCGGY 1 cut(s) 1074
Cfr13I GGNCC 2 cut(s) 158, 983
ClaI ATCGAT 1 cut(s) 1108
CseI GACGC 2 cut(s) 212, 623
Csp6I GTAC 1 cut(s) 283
CviAII CATG 9 cut(s) 93, 103, 269, 327, 335, 621, 666, 944, 1213
CviQI GTAC 1 cut(s) 283
DdeI CTNAG 3 cut(s) 279, 594, 783
DpnI GATC 4 cut(s) 68, 474, 903, 1000
DpnII GATC 4 cut(s) 66, 472, 901, 998
DraI TTTAAA 1 cut(s) 46
Eam1104I CTCTTC 1 cut(s) 258
EarI CTCTTC 1 cut(s) 258
Eco130I CCWWGG 1 cut(s) 1011
Eco24I GRGCYC 1 cut(s) 360
Eco31I GGTCTC 1 cut(s) 524
Eco32I GATATC 1 cut(s) 916
Eco47I GGWCC 2 cut(s) 158, 983
Eco57I CTGAAG 3 cut(s) 193, 744, 972
EcoO109I RGGNCCY 1 cut(s) 983
EcoRI GAATTC 1 cut(s) 1180
EcoRII CCWGG 1 cut(s) 675
EcoRV GATATC 1 cut(s) 916
EcoT14I CCWWGG 1 cut(s) 1011
EcoT22I ATGCAT 1 cut(s) 368
EcoT38I GRGCYC 1 cut(s) 360
ErhI CCWWGG 1 cut(s) 1011
FaeI CATG 9 cut(s) 96, 106, 272, 330, 338, 624, 669, 947, 1216
FaqI GGGAC 2 cut(s) 791, 1116
FatI CATG 9 cut(s) 92, 102, 268, 326, 334, 620, 665, 943, 1212
FauNDI CATATG 1 cut(s) 71
FbaI TGATCA 2 cut(s) 66, 472
FokI GGATG 3 cut(s) 23, 110, 1110
FriOI GRGCYC 1 cut(s) 360
FspBI CTAG 3 cut(s) 557, 608, 1199
GsuI CTGGAG 2 cut(s) 41, 859
HapII CCGG 3 cut(s) 797, 1075, 1158
HgaI GACGC 2 cut(s) 212, 623
Hin1I GRCGYC 3 cut(s) 204, 291, 634
Hin1II CATG 9 cut(s) 96, 106, 272, 330, 338, 624, 669, 947, 1216
HincII GTYRAC 2 cut(s) 313, 1033
HindII GTYRAC 2 cut(s) 313, 1033
HinfI GANTC 7 cut(s) 484, 625, 694, 773, 947, 992, 1161
HpaI GTTAAC 1 cut(s) 1033
HpaII CCGG 3 cut(s) 797, 1075, 1158
HphI GGTGA 1 cut(s) 1049
Hpy166II GTNNAC 3 cut(s) 313, 766, 1033
Hpy188I TCNGA 5 cut(s) 66, 655, 991, 1051, 1166
Hpy188III TCNNGA 7 cut(s) 813, 876, 911, 919, 996, 1148, 1158
Hpy8I GTNNAC 3 cut(s) 313, 766, 1033
Hpy99I CGWCG 5 cut(s) 206, 293, 296, 639, 1064
HpyAV CCTTC 5 cut(s) 176, 217, 449, 996, 1137
HpyCH4III ACNGT 5 cut(s) 589, 737, 895, 1037, 1177
HpyCH4IV ACGT 2 cut(s) 291, 1068
HpyCH4V TGCA 9 cut(s) 75, 87, 366, 411, 669, 766, 832, 928, 943
HpyF10VI GCNNNNNNNGC 3 cut(s) 389, 645, 793
HpyF3I CTNAG 3 cut(s) 279, 594, 783
HpySE526I ACGT 2 cut(s) 291, 1068
Hsp92I GRCGYC 3 cut(s) 204, 291, 634
Hsp92II CATG 9 cut(s) 96, 106, 272, 330, 338, 624, 669, 947, 1216
Kpn2I TCCGGA 1 cut(s) 1157
Ksp22I TGATCA 2 cut(s) 66, 472
KspAI GTTAAC 1 cut(s) 1033
Kzo9I GATC 4 cut(s) 66, 472, 901, 998
LmnI GCTCC 1 cut(s) 575
LweI GCATC 4 cut(s) 375, 514, 783, 827
MaeI CTAG 3 cut(s) 557, 608, 1199
MaeII ACGT 2 cut(s) 291, 1068
MaeIII GTNAC 5 cut(s) 350, 433, 559, 731, 737
MalI GATC 4 cut(s) 68, 474, 903, 1000
MboI GATC 4 cut(s) 66, 472, 901, 998
MboII GAAGA 3 cut(s) 245, 689, 737
MfeI CAATTG 1 cut(s) 303
MflI RGATCY 1 cut(s) 998
MhlI GDGCHC 3 cut(s) 347, 360, 768
MluCI AATT 6 cut(s) 118, 303, 451, 466, 880, 1180
MlyI GAGTC 4 cut(s) 493, 634, 782, 956
MmeI TCCRAC 2 cut(s) 633, 1029
Mph1103I ATGCAT 1 cut(s) 368
MroI TCCGGA 1 cut(s) 1157
MseI TTAA 5 cut(s) 45, 108, 642, 687, 1032
MspI CCGG 3 cut(s) 797, 1075, 1158
MspR9I CCNGG 1 cut(s) 677
MunI CAATTG 1 cut(s) 303
Mva1269I GAATGC 1 cut(s) 327
MvaI CCWGG 1 cut(s) 677
MvnI CGCG 1 cut(s) 639
MwoI GCNNNNNNNGC 3 cut(s) 389, 645, 793
NdeI CATATG 1 cut(s) 71
NdeII GATC 4 cut(s) 66, 472, 901, 998
NlaIII CATG 9 cut(s) 96, 106, 272, 330, 338, 624, 669, 947, 1216
NmeAIII GCCGAG 2 cut(s) 553, 610
NmuCI GTSAC 2 cut(s) 433, 559
NsiI ATGCAT 1 cut(s) 368
NspI RCATGY 1 cut(s) 669
PaeI GCATGC 1 cut(s) 669
PcsI WCGNNNNNNNCGW 1 cut(s) 1065
PctI GAATGC 1 cut(s) 327
PfeI GAWTC 3 cut(s) 694, 992, 1161
PflMI CCANNNNNTGG 1 cut(s) 340
PleI GAGTC 4 cut(s) 492, 633, 781, 955
PpsI GAGTC 4 cut(s) 492, 633, 781, 955
PpuMI RGGWCCY 1 cut(s) 983
Psp1406I AACGTT 1 cut(s) 1068
Psp5II RGGWCCY 1 cut(s) 983
Psp6I CCWGG 1 cut(s) 675
PspGI CCWGG 1 cut(s) 675
PspPI GGNCC 2 cut(s) 158, 983
PspPPI RGGWCCY 1 cut(s) 983
PstNI CAGNNNCTG 1 cut(s) 64
PsuI RGATCY 1 cut(s) 998
RsaI GTAC 1 cut(s) 284
RsaNI GTAC 1 cut(s) 283
SaqAI TTAA 5 cut(s) 45, 108, 642, 687, 1032
Sau3AI GATC 4 cut(s) 66, 472, 901, 998
Sau96I GGNCC 2 cut(s) 158, 983
ScaI AGTACT 1 cut(s) 284
SchI GAGTC 4 cut(s) 493, 634, 782, 956
ScrFI CCNGG 1 cut(s) 677
SduI GDGCHC 3 cut(s) 347, 360, 768
SfaNI GCATC 4 cut(s) 375, 514, 783, 827
SinI GGWCC 2 cut(s) 158, 983
SpeI ACTAGT 1 cut(s) 556
SphI GCATGC 1 cut(s) 669
Sse9I AATT 6 cut(s) 118, 303, 451, 466, 880, 1180
SsiI CCGC 1 cut(s) 383
SspI AATATT 1 cut(s) 1056
SspMI CTAG 3 cut(s) 557, 608, 1199
StyD4I CCNGG 1 cut(s) 675
StyI CCWWGG 1 cut(s) 1011
TaaI ACNGT 5 cut(s) 589, 737, 895, 1037, 1177
TaiI ACGT 2 cut(s) 294, 1071
TaqI TCGA 9 cut(s) 6, 116, 294, 812, 973, 995, 1059, 1108, 1118
TasI AATT 6 cut(s) 118, 303, 451, 466, 880, 1180
TatI WGTACW 1 cut(s) 282
TfiI GAWTC 3 cut(s) 694, 992, 1161
Tru1I TTAA 5 cut(s) 45, 108, 642, 687, 1032
Tru9I TTAA 5 cut(s) 45, 108, 642, 687, 1032
TscAI CASTG 3 cut(s) 65, 438, 619
TseFI GTSAC 2 cut(s) 433, 559
Tsp45I GTSAC 2 cut(s) 433, 559
TspDTI ATGAA 5 cut(s) 112, 245, 391, 689, 736
TspGWI ACGGA 1 cut(s) 333
TspRI CASTG 3 cut(s) 65, 438, 619
Van91I CCANNNNNTGG 1 cut(s) 340
VneI GTGCAC 1 cut(s) 764
VpaK11BI GGWCC 2 cut(s) 158, 983
XapI RAATTY 4 cut(s) 118, 451, 880, 1180
XceI RCATGY 1 cut(s) 669
XspI CTAG 3 cut(s) 557, 608, 1199
ZraI GACGTC 1 cut(s) 292
ZrmI AGTACT 1 cut(s) 284
Zsp2I ATGCAT 1 cut(s) 368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.