FvH4_5g11821

F-box and associated interaction domains-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000068
Physical Location & Seq
Forward (+)
6690246 .. 6692195
1950 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g11821.t1

Sequence Viewer

Length: 1113 bp
ATGTCTGGAACATCAAAAGCTGCAGTGGTACCACGCTACCTTGTTCCTGAAGAAATCATTCGTGAAATCCTACTGTGCGCAGTCTGCGCAGAGGTCAGTACAAGGTACAACAACCGAAACTGCATCGTTCACCTTCTACTATGCGGGCACACCGCCGCGAGTTACTACCTTGATCCATGCGAGCCCACCACGGCGAGTAGTTGCACGTTGTATGTGATGAAAGACGACCCTGCAACATTGACCGGAGATGAGTGCTATACCAAGTTTACATATCCTTTATCGAAACATGTAAATGCGGATGCCTGCACTCTGATCGGAACTTGTAACAGCCTCATATGCCTTGCCGATGACGAATTGCCCATGAGTACTCCCCCAGTTCCCACGCTACTATGGAATCCTTCAATCAGAAAGATTGTGATTTTGCCTAGGCCTAGTATCAAGTCTACACCAATTTATGAGGAAACTCATCACGCTTTTGGCTATGATGCTCAGAGCAATGATTTTAAGGTTTTAAGAATTCTACAGTATAATGGAAGATGGAATACGACGACGAAACTATGTGAGGTTGAGTGGGAAAACATCATTGTGTCGTTTGATATGGCCGGAGAATTATTTAGCGAGATAGAGATGCCGGAAGCTATCTCGGATGAACACAGTATGGATATTTCAGTAGCAAGATACGGAGAGTTCCTTGCCTTGAATGATGTTAAGAGCAGTATTGACATATGGGTTATGAAAGAGTATGGTGTGAGTATCCTAGAACATTCTGGATACGTCTACAATGCTCCCTTCCAAGAAGTATCCAATGAGGCTCCGGACCCTTCTAGACCAAGGCCAAAACTTGCAGGGTGTGACACTCTCCCCCACCTAGCTCGCGATGCCCTCATCGCGACCTTGCTCGTTGTAGCGCTTGATCTTGTCTTTGAATTGCCACAACGAGTCTTCAGTTTCCCAACTTGCTTCGGCATCGGGCAAGTTCTTCCACTTGACGAGGTACTCCTTGTAAGGTGGCACGCCTCTTCGTCGAACCACTCTTTCGGCAAGAACTTCGTCTACTTGCTTGTCAAAGCTTGTGACGACCGCCGTCGGTGCCCGGTGCGAAATGCTCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

371

Amino Acids

41.38

Weight (kDa)

5.17

Isoelectric Point (pI)

48.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FBA_3 PF08268 89 - 178 2.1e-07 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 79, 88
Acc65I GGTACC 1 cut(s) 28
AccB1I GGYRCC 2 cut(s) 28, 1089
AccI GTMKAC 3 cut(s) 443, 777, 1053
AccII CGCG 3 cut(s) 158, 876, 890
AccIII TCCGGA 1 cut(s) 814
AciI CCGC 5 cut(s) 144, 153, 156, 296, 1081
AclWI GGATC 1 cut(s) 167
AcoI YGGCCR 1 cut(s) 600
AcsI RAATTY 1 cut(s) 516
AcuI CTGAAG 2 cut(s) 69, 928
AfaI GTAC 5 cut(s) 30, 100, 107, 367, 996
AfeI AGCGCT 1 cut(s) 909
AflIII ACRYGT 1 cut(s) 286
AgsI TTSAA 3 cut(s) 402, 700, 926
AluBI AGCT 4 cut(s) 20, 638, 872, 1070
AluI AGCT 4 cut(s) 20, 638, 872, 1070
AlwI GGATC 1 cut(s) 167
Aor13HI TCCGGA 1 cut(s) 814
Aor51HI AGCGCT 1 cut(s) 909
AoxI GGCC 3 cut(s) 428, 600, 833
ApeKI GCWGC 1 cut(s) 20
ApoI RAATTY 1 cut(s) 516
Asp700I GAANNNNTTC 1 cut(s) 57
Asp718I GGTACC 1 cut(s) 28
AspA2I CCTAGG 1 cut(s) 425
AspLEI GCGC 3 cut(s) 80, 89, 910
AspS9I GGNCC 1 cut(s) 817
AsuC2I CCSGG 1 cut(s) 1094
AsuHPI GGTGA 1 cut(s) 122
AvaII GGWCC 1 cut(s) 817
AvrII CCTAGG 1 cut(s) 425
BaeGI GKGCMC 2 cut(s) 150, 1094
BanI GGYRCC 2 cut(s) 28, 1089
BanII GRGCYC 1 cut(s) 186
BarI GAAGNNNNNNTAC 2 cut(s) 526, 558
BbsI GAAGAC 1 cut(s) 934
BbvI GCAGC 1 cut(s) 7
BccI CCATC 1 cut(s) 531
BceAI ACGGC 2 cut(s) 207, 1068
BcgI CGANNNNNNTGC 4 cut(s) 295, 329, 1030, 1064
BciVI GTATCC 3 cut(s) 764, 764, 811
BcnI CCSGG 1 cut(s) 1094
BfaI CTAG 5 cut(s) 426, 432, 758, 825, 869
BfmI CTRYAG 2 cut(s) 21, 521
BfoI RGCGCY 1 cut(s) 911
BfuI GTATCC 3 cut(s) 764, 764, 811
BisI GCNGC 2 cut(s) 21, 156
BlnI CCTAGG 1 cut(s) 425
BlsI GCNGC 2 cut(s) 22, 157
BmcAI AGTACT 1 cut(s) 367
Bme1390I CCNGG 1 cut(s) 1094
Bme18I GGWCC 1 cut(s) 817
BmgT120I GGNCC 1 cut(s) 817
BmiI GGNNCC 4 cut(s) 30, 813, 819, 1091
BmrFI CCNGG 1 cut(s) 1094
BmrI ACTGGG 1 cut(s) 368
BmsI GCATC 6 cut(s) 132, 289, 475, 618, 868, 975
BmuI ACTGGG 1 cut(s) 368
BoxI GACNNNNGTC 1 cut(s) 1083
BpiI GAAGAC 1 cut(s) 934
BpuMI CCSGG 1 cut(s) 1094
BsaJI CCNNGG 3 cut(s) 189, 425, 830
BsaWI WCCGGW 2 cut(s) 242, 814
Bse1I ACTGG 1 cut(s) 374
Bse3DI GCAATG 1 cut(s) 502
BseAI TCCGGA 1 cut(s) 814
BseDI CCNNGG 3 cut(s) 189, 425, 830
BseGI GGATG 2 cut(s) 304, 652
BseMI GCAATG 1 cut(s) 502
BseMII CTCAG 1 cut(s) 503
BseNI ACTGG 1 cut(s) 374
BseSI GKGCMC 2 cut(s) 150, 1094
BseXI GCAGC 1 cut(s) 7
BsgI GTGCAG 1 cut(s) 289
Bsh1236I CGCG 3 cut(s) 158, 876, 890
Bsh1285I CGRYCG 1 cut(s) 1081
BshFI GGCC 3 cut(s) 430, 602, 835
BshNI GGYRCC 2 cut(s) 28, 1089
BsiEI CGRYCG 1 cut(s) 1081
BsiSI CCGG 5 cut(s) 243, 603, 632, 815, 1094
BsnI GGCC 3 cut(s) 430, 602, 835
Bsp1286I GDGCHC 3 cut(s) 150, 186, 1094
Bsp13I TCCGGA 1 cut(s) 814
Bsp143I GATC 3 cut(s) 172, 312, 913
Bsp68I TCGCGA 2 cut(s) 876, 890
BspACI CCGC 5 cut(s) 144, 153, 156, 296, 1081
BspANI GGCC 3 cut(s) 430, 602, 835
BspCNI CTCAG 1 cut(s) 502
BspEI TCCGGA 1 cut(s) 814
BspFNI CGCG 3 cut(s) 158, 876, 890
BspLI GGNNCC 4 cut(s) 30, 813, 819, 1091
BspMAI CTGCAG 1 cut(s) 25
BspPI GGATC 1 cut(s) 167
BspT107I GGYRCC 2 cut(s) 28, 1089
BsrDI GCAATG 1 cut(s) 502
BsrI ACTGG 1 cut(s) 374
BssECI CCNNGG 3 cut(s) 189, 425, 830
BssMI GATC 3 cut(s) 172, 312, 913
BssT1I CCWWGG 2 cut(s) 425, 830
Bst4CI ACNGT 3 cut(s) 75, 525, 656
Bst6I CTCTTC 1 cut(s) 1024
BstC8I GCNNGC 5 cut(s) 146, 182, 304, 874, 1014
BstDEI CTNAG 1 cut(s) 489
BstDSI CCRYGG 1 cut(s) 189
BstF5I GGATG 2 cut(s) 304, 652
BstFNI CGCG 3 cut(s) 158, 876, 890
BstH2I RGCGCY 1 cut(s) 911
BstHHI GCGC 3 cut(s) 80, 89, 910
BstKTI GATC 3 cut(s) 175, 315, 916
BstMBI GATC 3 cut(s) 172, 312, 913
BstMCI CGRYCG 1 cut(s) 1081
BstMWI GCNNNNNNNGC 6 cut(s) 84, 86, 336, 878, 887, 1089
BstNSI RCATGY 1 cut(s) 290
BstPAI GACNNNNGTC 1 cut(s) 1083
BstSCI CCNGG 1 cut(s) 1092
BstSFI CTRYAG 2 cut(s) 21, 521
BstSLI GKGCMC 2 cut(s) 150, 1094
BstUI CGCG 3 cut(s) 158, 876, 890
BstV1I GCAGC 1 cut(s) 7
BstV2I GAAGAC 1 cut(s) 934
BsuI GTATCC 3 cut(s) 764, 764, 811
BsuRI GGCC 3 cut(s) 430, 602, 835
BtgI CCRYGG 1 cut(s) 189
BtgZI GCGATG 2 cut(s) 871, 891
BtsCI GGATG 2 cut(s) 304, 652
BtsI GCAGTG 1 cut(s) 30
BtsIMutI CAGTG 1 cut(s) 30
BtuMI TCGCGA 2 cut(s) 876, 890
Cac8I GCNNGC 5 cut(s) 146, 182, 304, 874, 1014
CfoI GCGC 3 cut(s) 80, 89, 910
Cfr13I GGNCC 1 cut(s) 817
Csp6I GTAC 5 cut(s) 29, 99, 106, 366, 995
CviAII CATG 3 cut(s) 177, 287, 361
CviQI GTAC 5 cut(s) 29, 99, 106, 366, 995
DdeI CTNAG 1 cut(s) 489
DpnI GATC 3 cut(s) 174, 314, 915
DpnII GATC 3 cut(s) 172, 312, 913
EaeI YGGCCR 1 cut(s) 600
Eam1104I CTCTTC 1 cut(s) 1024
EarI CTCTTC 1 cut(s) 1024
Eco130I CCWWGG 2 cut(s) 425, 830
Eco147I AGGCCT 1 cut(s) 430
Eco24I GRGCYC 1 cut(s) 186
Eco47I GGWCC 1 cut(s) 817
Eco47III AGCGCT 1 cut(s) 909
Eco57I CTGAAG 2 cut(s) 69, 928
EcoRI GAATTC 1 cut(s) 516
EcoT14I CCWWGG 2 cut(s) 425, 830
EcoT38I GRGCYC 1 cut(s) 186
ErhI CCWWGG 2 cut(s) 425, 830
FaeI CATG 3 cut(s) 180, 290, 364
FatI CATG 3 cut(s) 176, 286, 360
FauI CCCGC 1 cut(s) 137
FauNDI CATATG 2 cut(s) 335, 725
FblI GTMKAC 3 cut(s) 443, 777, 1053
Fnu4HI GCNGC 2 cut(s) 21, 156
FokI GGATG 2 cut(s) 311, 659
FriOI GRGCYC 1 cut(s) 186
Fsp4HI GCNGC 2 cut(s) 21, 156
FspBI CTAG 5 cut(s) 426, 432, 758, 825, 869
FspI TGCGCA 2 cut(s) 79, 88
GlaI GCGC 3 cut(s) 79, 88, 909
GluI GCNGC 2 cut(s) 21, 156
HaeII RGCGCY 1 cut(s) 911
HaeIII GGCC 3 cut(s) 430, 602, 835
HapII CCGG 5 cut(s) 243, 603, 632, 815, 1094
HhaI GCGC 3 cut(s) 80, 89, 910
Hin1II CATG 3 cut(s) 180, 290, 364
Hin6I GCGC 3 cut(s) 78, 87, 908
HinP1I GCGC 3 cut(s) 78, 87, 908
HindIII AAGCTT 1 cut(s) 1068
HinfI GANTC 2 cut(s) 394, 939
HpaII CCGG 5 cut(s) 243, 603, 632, 815, 1094
HphI GGTGA 1 cut(s) 122
Hpy166II GTNNAC 5 cut(s) 130, 267, 444, 778, 1054
Hpy188I TCNGA 5 cut(s) 312, 317, 407, 492, 646
Hpy188III TCNNGA 8 cut(s) 6, 47, 62, 768, 815, 825, 875, 889
Hpy8I GTNNAC 5 cut(s) 130, 267, 444, 778, 1054
Hpy99I CGWCG 4 cut(s) 550, 553, 1027, 1089
HpyAV CCTTC 4 cut(s) 143, 408, 799, 831
HpyCH4III ACNGT 3 cut(s) 75, 525, 656
HpyCH4IV ACGT 2 cut(s) 206, 774
HpyCH4V TGCA 6 cut(s) 23, 123, 204, 233, 306, 845
HpyF10VI GCNNNNNNNGC 6 cut(s) 84, 86, 336, 878, 887, 1089
HpyF3I CTNAG 1 cut(s) 489
HpySE526I ACGT 2 cut(s) 206, 774
Hsp92II CATG 3 cut(s) 180, 290, 364
HspAI GCGC 3 cut(s) 78, 87, 908
Kpn2I TCCGGA 1 cut(s) 814
KpnI GGTACC 1 cut(s) 32
Kzo9I GATC 3 cut(s) 172, 312, 913
LmnI GCTCC 3 cut(s) 790, 817, 1111
Lsp1109I GCAGC 1 cut(s) 7
LweI GCATC 6 cut(s) 132, 289, 475, 618, 868, 975
MaeI CTAG 5 cut(s) 426, 432, 758, 825, 869
MaeII ACGT 2 cut(s) 206, 774
MaeIII GTNAC 4 cut(s) 161, 323, 851, 1073
MalI GATC 3 cut(s) 174, 314, 915
MboI GATC 3 cut(s) 172, 312, 913
MboII GAAGA 5 cut(s) 62, 546, 934, 971, 1011
MhlI GDGCHC 3 cut(s) 150, 186, 1094
MluCI AATT 5 cut(s) 353, 450, 516, 608, 926
MlyI GAGTC 1 cut(s) 948
MnlI CCTC 8 cut(s) 85, 341, 451, 556, 802, 893, 985, 1027
MroI TCCGGA 1 cut(s) 814
MroXI GAANNNNTTC 1 cut(s) 57
MseI TTAA 3 cut(s) 504, 512, 708
MslI CAYNNNNRTG 2 cut(s) 291, 584
MspI CCGG 5 cut(s) 243, 603, 632, 815, 1094
MspR9I CCNGG 1 cut(s) 1094
MvnI CGCG 3 cut(s) 158, 876, 890
MwoI GCNNNNNNNGC 6 cut(s) 84, 86, 336, 878, 887, 1089
NciI CCSGG 1 cut(s) 1094
NdeI CATATG 2 cut(s) 335, 725
NdeII GATC 3 cut(s) 172, 312, 913
NlaIII CATG 3 cut(s) 180, 290, 364
NlaIV GGNNCC 4 cut(s) 30, 813, 819, 1091
NmuCI GTSAC 2 cut(s) 851, 1073
NruI TCGCGA 2 cut(s) 876, 890
NsbI TGCGCA 2 cut(s) 79, 88
NspI RCATGY 1 cut(s) 290
PceI AGGCCT 1 cut(s) 430
PciI ACATGT 1 cut(s) 286
PdmI GAANNNNTTC 1 cut(s) 57
PfeI GAWTC 1 cut(s) 394
PkrI GCNGC 2 cut(s) 22, 157
PleI GAGTC 1 cut(s) 947
PpsI GAGTC 1 cut(s) 947
PscI ACATGT 1 cut(s) 286
PshAI GACNNNNGTC 1 cut(s) 1083
PspN4I GGNNCC 4 cut(s) 30, 813, 819, 1091
PspPI GGNCC 1 cut(s) 817
PsrI GAACNNNNNNTAC 2 cut(s) 1037, 1069
PstI CTGCAG 1 cut(s) 25
RruI TCGCGA 2 cut(s) 876, 890
RsaI GTAC 5 cut(s) 30, 100, 107, 367, 996
RsaNI GTAC 5 cut(s) 29, 99, 106, 366, 995
RseI CAYNNNNRTG 2 cut(s) 291, 584
SaqAI TTAA 3 cut(s) 504, 512, 708
SatI GCNGC 2 cut(s) 21, 156
Sau3AI GATC 3 cut(s) 172, 312, 913
Sau96I GGNCC 1 cut(s) 817
ScaI AGTACT 1 cut(s) 367
SchI GAGTC 1 cut(s) 948
ScrFI CCNGG 1 cut(s) 1094
SduI GDGCHC 3 cut(s) 150, 186, 1094
SfaNI GCATC 6 cut(s) 132, 289, 475, 618, 868, 975
SfcI CTRYAG 2 cut(s) 21, 521
SinI GGWCC 1 cut(s) 817
SmiMI CAYNNNNRTG 2 cut(s) 291, 584
Sse9I AATT 5 cut(s) 353, 450, 516, 608, 926
SseBI AGGCCT 1 cut(s) 430
SsiI CCGC 5 cut(s) 144, 153, 156, 296, 1081
SspMI CTAG 5 cut(s) 426, 432, 758, 825, 869
StuI AGGCCT 1 cut(s) 430
StyD4I CCNGG 1 cut(s) 1092
StyI CCWWGG 2 cut(s) 425, 830
TaaI ACNGT 3 cut(s) 75, 525, 656
TaiI ACGT 2 cut(s) 209, 777
TaqI TCGA 2 cut(s) 281, 1025
TasI AATT 5 cut(s) 353, 450, 516, 608, 926
TatI WGTACW 2 cut(s) 98, 365
TauI GCSGC 1 cut(s) 158
TfiI GAWTC 1 cut(s) 394
Tru1I TTAA 3 cut(s) 504, 512, 708
Tru9I TTAA 3 cut(s) 504, 512, 708
TscAI CASTG 1 cut(s) 30
TseFI GTSAC 2 cut(s) 851, 1073
TseI GCWGC 1 cut(s) 20
Tsp45I GTSAC 2 cut(s) 851, 1073
TspDTI ATGAA 3 cut(s) 233, 663, 749
TspGWI ACGGA 1 cut(s) 696
TspRI CASTG 1 cut(s) 30
VpaK11BI GGWCC 1 cut(s) 817
XapI RAATTY 1 cut(s) 516
XbaI TCTAGA 1 cut(s) 824
XceI RCATGY 1 cut(s) 290
XmaJI CCTAGG 1 cut(s) 425
XmiI GTMKAC 3 cut(s) 443, 777, 1053
XmnI GAANNNNTTC 1 cut(s) 57
XspI CTAG 5 cut(s) 426, 432, 758, 825, 869
ZrmI AGTACT 1 cut(s) 367
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.