Rorug05G0178200

F-box kelch-repeat protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
16650756 .. 16652156
1401 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0178200.1

Sequence Viewer

Length: 1143 bp
ATGAAATCCAGACTCCAATCTTTACTAAAGCTCCGTAATTTACTTCCAGCTTCGCCATATCTGATCCCTTTGCCCAAATGCTTCCCCTCACCCAAGTCCTGCATTTTCATGCCCACCACGTATTCGACGGTTTGCCTGACCCAACAAGAAGGTGTAGGAAAAGACACTAGCGACCAACCCGAGGACTCTGTGCGAGTCCTGAAGAGATTGGGCTGTAGCGATGCTGACATAACCAAGATTTTCACAAAGGCATCTGCTCTAAAGCACGCTGACATAGACCAGCTCAACTGGAAACTCGAACTCCTAACTGGGTTGGGACTTACTGCACCTGAGCTGGTGAAGATAGTCTGTGGCCGGCCCCGGATTCTCGTTTCTCGACTCACCTGCTTTGCTGAGCAGCTTAAGTACTTCAATGAATTGTTTGGTTCAAGGGAGTTGCTTGTCAGAGCCATTTTGAGGAACCCGTCTCTCCTGACCTATGACCTTCACAAGACAATCAAACCCACCATTGAGATGTATAGAGTAGTTGGTCTTGATATGGAGGGCTTGATCCAAATGATTCTAGCGCGGCCGACATTGATCTCAAGAACTTCATTTAGTGAAGAGAAGATGGAGTTTATCCGCAAGACCGGGGTGTCAAAAACTGCCACAATGTATAAGTATGTAGTCACAATCATTGGCGTTTCGCGCCTTGAAACTATCCGTCAGAAGATAGCAAACTTTGAGAAGTTTGGTATGTCAGAAGAAGAGATTTTCTGTCTTTTTGGGAAATCTCCCTATGTTATGTTACTGTCAATCGATAAGGTTCAGAGGAACATGACTTTCATCTTATCACAATTGAAGCTTCCTGCTAAAATAGTTCTTGATCGCCCAAGTTTGCTATACTTGAATCTGGAGAATGTGATGAAGCCACGAGCACTTCTCGCAGGGAAGATGCGCGAAATGGGACTTGAACCGCAAATTACAGGTCCTATGATCTTGACTGTAATGAGGATGAATGAGAAGAGATTTCTGAAGGCATTTGTTAGTCATCAACCGATGGAGGTTGCTGATGAATTGATGGAGTACTACGAAAATGTGAAGGGTGTGAAGCGATTGGCAGAAGCCTCGAAGAAGAACTGTAATTATGGATTTCCTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

380

Amino Acids

43.33

Weight (kDa)

9.47

Isoelectric Point (pI)

42.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTERF PF02536 65 - 127 5.4e-06 mTERF
mTERF PF02536 134 - 338 1.9e-29 mTERF
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 392
AasI GACNNNNNNGTC 1 cut(s) 634
Acc36I ACCTGC 1 cut(s) 392
AccII CGCG 3 cut(s) 568, 688, 939
AciI CCGC 3 cut(s) 568, 622, 956
AclWI GGATC 2 cut(s) 58, 544
AcoI YGGCCR 2 cut(s) 352, 569
AcuI CTGAAG 2 cut(s) 221, 1034
AfaI GTAC 2 cut(s) 407, 1067
AfiI CCNNNNNNNGG 2 cut(s) 181, 456
AflII CTTAAG 1 cut(s) 401
AgsI TTSAA 6 cut(s) 412, 429, 695, 841, 889, 953
AluBI AGCT 6 cut(s) 31, 50, 283, 334, 400, 844
AluI AGCT 6 cut(s) 31, 50, 283, 334, 400, 844
Alw21I GWGCWC 1 cut(s) 919
Alw26I GTCTC 1 cut(s) 471
AlwI GGATC 2 cut(s) 58, 544
Ama87I CYCGRG 1 cut(s) 179
AoxI GGCC 3 cut(s) 352, 356, 569
ApeKI GCWGC 1 cut(s) 397
ArsI GACNNNNNNTTYG 2 cut(s) 952, 984
AspLEI GCGC 3 cut(s) 568, 690, 939
AspS9I GGNCC 2 cut(s) 357, 968
AsuC2I CCSGG 2 cut(s) 361, 631
AsuHPI GGTGA 3 cut(s) 81, 349, 373
AvaI CYCGRG 1 cut(s) 179
AvaII GGWCC 1 cut(s) 968
BauI CACGAG 1 cut(s) 912
Bbv12I GWGCWC 1 cut(s) 919
BbvI GCAGC 1 cut(s) 409
BccI CCATC 3 cut(s) 604, 1033, 1054
BcgI CGANNNNNNTGC 4 cut(s) 366, 400, 1089, 1123
BcnI CCSGG 2 cut(s) 361, 631
BcoDI GTCTC 1 cut(s) 471
BfaI CTAG 2 cut(s) 168, 563
BfmI CTRYAG 1 cut(s) 214
BfrI CTTAAG 1 cut(s) 401
BfuAI ACCTGC 1 cut(s) 392
BisI GCNGC 2 cut(s) 398, 569
BlpI GCTNAGC 1 cut(s) 393
BlsI GCNGC 2 cut(s) 399, 570
BmcAI AGTACT 2 cut(s) 407, 1067
Bme1390I CCNGG 2 cut(s) 361, 631
Bme18I GGWCC 1 cut(s) 968
BmeT110I CYCGRG 1 cut(s) 179
BmgT120I GGNCC 2 cut(s) 357, 968
BmiI GGNNCC 2 cut(s) 359, 461
BmrFI CCNGG 2 cut(s) 361, 631
BmrI ACTGGG 1 cut(s) 318
BmsI GCATC 3 cut(s) 211, 260, 924
BmuI ACTGGG 1 cut(s) 318
BplI GAGNNNNNCTC 2 cut(s) 906, 938
BpmI CTGGAG 1 cut(s) 914
Bpu10I CCTNAGC 1 cut(s) 330
Bpu1102I GCTNAGC 1 cut(s) 393
BpuEI CTTGAG 1 cut(s) 568
BpuMI CCSGG 2 cut(s) 361, 631
Bsa29I ATCGAT 1 cut(s) 798
BsaAI YACGTR 1 cut(s) 120
BsaJI CCNNGG 3 cut(s) 180, 359, 630
BsaXI ACNNNNNCTCC 4 cut(s) 15, 45, 285, 315
Bsc4I CCNNNNNNNGG 2 cut(s) 181, 456
Bse118I RCCGGY 1 cut(s) 354
Bse1I ACTGG 2 cut(s) 293, 313
BseCI ATCGAT 1 cut(s) 798
BseDI CCNNGG 3 cut(s) 180, 359, 630
BseGI GGATG 1 cut(s) 999
BseLI CCNNNNNNNGG 2 cut(s) 181, 456
BseMII CTCAG 2 cut(s) 321, 384
BseNI ACTGG 2 cut(s) 293, 313
BseX3I CGGCCG 1 cut(s) 569
BseXI GCAGC 1 cut(s) 409
BsgI GTGCAG 1 cut(s) 309
Bsh1236I CGCG 3 cut(s) 568, 688, 939
Bsh1285I CGRYCG 1 cut(s) 572
BshFI GGCC 3 cut(s) 354, 358, 571
BshVI ATCGAT 1 cut(s) 798
BsiEI CGRYCG 1 cut(s) 572
BsiHKAI GWGCWC 1 cut(s) 919
BsiHKCI CYCGRG 1 cut(s) 179
BsiSI CCGG 3 cut(s) 355, 361, 630
BslFI GGGAC 2 cut(s) 330, 960
BslI CCNNNNNNNGG 2 cut(s) 181, 456
BsmAI GTCTC 1 cut(s) 471
BsmBI CGTCTC 1 cut(s) 471
BsmFI GGGAC 2 cut(s) 330, 960
BsnI GGCC 3 cut(s) 354, 358, 571
BsoBI CYCGRG 1 cut(s) 179
Bsp1286I GDGCHC 1 cut(s) 919
Bsp143I GATC 5 cut(s) 63, 549, 579, 865, 975
Bsp1720I GCTNAGC 1 cut(s) 393
BspACI CCGC 3 cut(s) 568, 622, 956
BspANI GGCC 3 cut(s) 354, 358, 571
BspCNI CTCAG 2 cut(s) 322, 385
BspDI ATCGAT 1 cut(s) 798
BspFNI CGCG 3 cut(s) 568, 688, 939
BspLI GGNNCC 2 cut(s) 359, 461
BspMI ACCTGC 1 cut(s) 392
BspPI GGATC 2 cut(s) 58, 544
BspTI CTTAAG 1 cut(s) 401
BsrFI RCCGGY 1 cut(s) 354
BsrI ACTGG 2 cut(s) 293, 313
BssAI RCCGGY 1 cut(s) 354
BssECI CCNNGG 3 cut(s) 180, 359, 630
BssMI GATC 5 cut(s) 63, 549, 579, 865, 975
BssSI CACGAG 1 cut(s) 912
Bst2BI CACGAG 1 cut(s) 912
Bst4CI ACNGT 4 cut(s) 130, 792, 985, 1121
Bst6I CTCTTC 4 cut(s) 197, 597, 741, 998
BstAFI CTTAAG 1 cut(s) 401
BstBAI YACGTR 1 cut(s) 120
BstC8I GCNNGC 2 cut(s) 267, 356
BstDEI CTNAG 2 cut(s) 330, 393
BstF5I GGATG 1 cut(s) 999
BstFNI CGCG 3 cut(s) 568, 688, 939
BstHHI GCGC 3 cut(s) 568, 690, 939
BstKTI GATC 5 cut(s) 66, 552, 582, 868, 978
BstMAI GTCTC 1 cut(s) 471
BstMBI GATC 5 cut(s) 63, 549, 579, 865, 975
BstMCI CGRYCG 1 cut(s) 572
BstMWI GCNNNNNNNGC 2 cut(s) 687, 923
BstSCI CCNGG 2 cut(s) 359, 629
BstSFI CTRYAG 1 cut(s) 214
BstUI CGCG 3 cut(s) 568, 688, 939
BstV1I GCAGC 1 cut(s) 409
BstZI CGGCCG 1 cut(s) 569
Bsu15I ATCGAT 1 cut(s) 798
BsuRI GGCC 3 cut(s) 354, 358, 571
BsuTUI ATCGAT 1 cut(s) 798
BtgZI GCGATG 1 cut(s) 234
BtsCI GGATG 1 cut(s) 999
BveI ACCTGC 1 cut(s) 392
Cac8I GCNNGC 2 cut(s) 267, 356
CfoI GCGC 3 cut(s) 568, 690, 939
Cfr10I RCCGGY 1 cut(s) 354
Cfr13I GGNCC 2 cut(s) 357, 968
ClaI ATCGAT 1 cut(s) 798
Csp6I GTAC 2 cut(s) 406, 1066
CviAII CATG 2 cut(s) 109, 817
CviQI GTAC 2 cut(s) 406, 1066
DdeI CTNAG 2 cut(s) 330, 393
DpnI GATC 5 cut(s) 65, 551, 581, 867, 977
DpnII GATC 5 cut(s) 63, 549, 579, 865, 975
DrdI GACNNNNNNGTC 1 cut(s) 634
DseDI GACNNNNNNGTC 1 cut(s) 634
EaeI YGGCCR 2 cut(s) 352, 569
EagI CGGCCG 1 cut(s) 569
Eam1104I CTCTTC 4 cut(s) 197, 597, 741, 998
EarI CTCTTC 4 cut(s) 197, 597, 741, 998
EclXI CGGCCG 1 cut(s) 569
Eco47I GGWCC 1 cut(s) 968
Eco52I CGGCCG 1 cut(s) 569
Eco57I CTGAAG 2 cut(s) 221, 1034
Eco88I CYCGRG 1 cut(s) 179
EcoO109I RGGNCCY 1 cut(s) 968
Esp3I CGTCTC 1 cut(s) 471
FaeI CATG 2 cut(s) 112, 820
FaqI GGGAC 2 cut(s) 330, 960
FatI CATG 2 cut(s) 108, 816
Fnu4HI GCNGC 2 cut(s) 398, 569
FokI GGATG 1 cut(s) 1006
FseI GGCCGGCC 1 cut(s) 358
Fsp4HI GCNGC 2 cut(s) 398, 569
FspBI CTAG 2 cut(s) 168, 563
GlaI GCGC 3 cut(s) 567, 689, 938
GluI GCNGC 2 cut(s) 398, 569
GsuI CTGGAG 1 cut(s) 914
HaeIII GGCC 3 cut(s) 354, 358, 571
HapII CCGG 3 cut(s) 355, 361, 630
HhaI GCGC 3 cut(s) 568, 690, 939
Hin1II CATG 2 cut(s) 112, 820
Hin6I GCGC 3 cut(s) 566, 688, 937
HinP1I GCGC 3 cut(s) 566, 688, 937
HindIII AAGCTT 1 cut(s) 842
HinfI GANTC 7 cut(s) 12, 185, 195, 364, 378, 559, 889
HpaII CCGG 3 cut(s) 355, 361, 630
HphI GGTGA 3 cut(s) 81, 349, 373
Hpy188I TCNGA 7 cut(s) 63, 446, 708, 742, 810, 1014, 1142
Hpy188III TCNNGA 9 cut(s) 9, 199, 375, 472, 533, 585, 863, 893, 979
Hpy99I CGWCG 1 cut(s) 130
HpyAV CCTTC 4 cut(s) 143, 494, 1009, 1075
HpyCH4III ACNGT 4 cut(s) 130, 792, 985, 1121
HpyCH4IV ACGT 1 cut(s) 119
HpyCH4V TGCA 2 cut(s) 102, 326
HpyF10VI GCNNNNNNNGC 2 cut(s) 687, 923
HpyF3I CTNAG 2 cut(s) 330, 393
HpySE526I ACGT 1 cut(s) 119
Hsp92II CATG 2 cut(s) 112, 820
HspAI GCGC 3 cut(s) 566, 688, 937
KroI GCCGGC 1 cut(s) 354
KroNI GCCGGC 1 cut(s) 356
Kzo9I GATC 5 cut(s) 63, 549, 579, 865, 975
LmnI GCTCC 1 cut(s) 36
Lsp1109I GCAGC 1 cut(s) 409
LweI GCATC 3 cut(s) 211, 260, 924
MaeI CTAG 2 cut(s) 168, 563
MaeII ACGT 1 cut(s) 119
MaeIII GTNAC 2 cut(s) 667, 786
MalI GATC 5 cut(s) 65, 551, 581, 867, 977
MboI GATC 5 cut(s) 63, 549, 579, 865, 975
MfeI CAATTG 1 cut(s) 836
MhlI GDGCHC 1 cut(s) 919
MluCI AATT 6 cut(s) 37, 416, 836, 960, 1055, 1123
MlyI GAGTC 4 cut(s) 6, 179, 204, 372
MnlI CCTC 8 cut(s) 97, 175, 450, 535, 804, 984, 1036, 1117
MroNI GCCGGC 1 cut(s) 354
MseI TTAA 1 cut(s) 402
MslI CAYNNNNRTG 2 cut(s) 107, 512
MspCI CTTAAG 1 cut(s) 401
MspI CCGG 3 cut(s) 355, 361, 630
MspR9I CCNGG 2 cut(s) 361, 631
MunI CAATTG 1 cut(s) 836
MvnI CGCG 3 cut(s) 568, 688, 939
MwoI GCNNNNNNNGC 2 cut(s) 687, 923
NaeI GCCGGC 1 cut(s) 356
NciI CCSGG 2 cut(s) 361, 631
NdeII GATC 5 cut(s) 63, 549, 579, 865, 975
NgoMIV GCCGGC 1 cut(s) 354
NlaIII CATG 2 cut(s) 112, 820
NlaIV GGNNCC 2 cut(s) 359, 461
NmuCI GTSAC 1 cut(s) 667
PaqCI CACCTGC 1 cut(s) 392
PdiI GCCGGC 1 cut(s) 356
PfeI GAWTC 3 cut(s) 364, 559, 889
PkrI GCNGC 2 cut(s) 399, 570
PleI GAGTC 4 cut(s) 6, 179, 203, 372
PpsI GAGTC 4 cut(s) 6, 179, 203, 372
Ppu21I YACGTR 1 cut(s) 120
PpuMI RGGWCCY 1 cut(s) 968
Psp5II RGGWCCY 1 cut(s) 968
PspN4I GGNNCC 2 cut(s) 359, 461
PspPI GGNCC 2 cut(s) 357, 968
PspPPI RGGWCCY 1 cut(s) 968
RigI GGCCGGCC 1 cut(s) 358
RsaI GTAC 2 cut(s) 407, 1067
RsaNI GTAC 2 cut(s) 406, 1066
RseI CAYNNNNRTG 2 cut(s) 107, 512
SaqAI TTAA 1 cut(s) 402
SatI GCNGC 2 cut(s) 398, 569
Sau3AI GATC 5 cut(s) 63, 549, 579, 865, 975
Sau96I GGNCC 2 cut(s) 357, 968
ScaI AGTACT 2 cut(s) 407, 1067
SchI GAGTC 4 cut(s) 6, 179, 204, 372
ScrFI CCNGG 2 cut(s) 361, 631
SduI GDGCHC 1 cut(s) 919
SfaNI GCATC 3 cut(s) 211, 260, 924
SfcI CTRYAG 1 cut(s) 214
SinI GGWCC 1 cut(s) 968
SmiMI CAYNNNNRTG 2 cut(s) 107, 512
SmlI CTYRAG 2 cut(s) 401, 583
SmoI CTYRAG 2 cut(s) 401, 583
Sse9I AATT 6 cut(s) 37, 416, 836, 960, 1055, 1123
SsiI CCGC 3 cut(s) 568, 622, 956
SspMI CTAG 2 cut(s) 168, 563
StyD4I CCNGG 2 cut(s) 359, 629
TaaI ACNGT 4 cut(s) 130, 792, 985, 1121
TaiI ACGT 1 cut(s) 122
TaqI TCGA 5 cut(s) 125, 297, 376, 798, 1109
TasI AATT 6 cut(s) 37, 416, 836, 960, 1055, 1123
TatI WGTACW 2 cut(s) 405, 1065
TauI GCSGC 1 cut(s) 571
TfiI GAWTC 3 cut(s) 364, 559, 889
Tru1I TTAA 1 cut(s) 402
Tru9I TTAA 1 cut(s) 402
TseFI GTSAC 1 cut(s) 667
TseI GCWGC 1 cut(s) 397
Tsp45I GTSAC 1 cut(s) 667
TspDTI ATGAA 8 cut(s) 17, 97, 429, 582, 814, 920, 1010, 1068
TspGWI ACGGA 2 cut(s) 23, 692
Vha464I CTTAAG 1 cut(s) 401
VpaK11BI GGWCC 1 cut(s) 968
XspI CTAG 2 cut(s) 168, 563
ZrmI AGTACT 2 cut(s) 407, 1067
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.