Prupe.8G003300_v2.0.a1

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000068
Physical Location & Seq
Reverse (-)
285933 .. 287098
1166 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G003300.1

Sequence Viewer

Length: 1125 bp
ATGGTAGGGGACAAGGTTCCTGAAGATATCATATACGAAATCTTGCTAAAGTTACCTGTCAGATCTCTACTTCGGTTCACGGCAGTGTGTAAGTCATGGAATTGTATGATCAAAAGCTCTACTTCATCACCCATCATCTCATTCAAAACGAAGACGTTCAACTCCTCCTTTACAACCCTCAATATGGGATGTACTTATTGTACAAGGATGATGACAACGACGATGGCCGTTCATCATCTACGCTTAGAGAGGTTGGCATCCCAGTTTGTCGGAACTTGTAAGGGTCTCGTGTGCCTTGCTGTGGAAGACATTGACTCTACCGCATTAGTTTGGAACCCTAGCATCAGAAAGTTTGTGGTTTTGCCTAAGTCTGGTGTTACCTTTTGTGATGAATATGATTATCTAGAAGCAAGCTGTGGCTTTGGCTACGACAGGAGTGCCAATGACTATAAGGTCTTACGAAGAGCGTCTTCTTTTCGAGGAAACAAATTTATCTCATGTCAATATGAGATCTGGTCGTTAGCCAAGGGCTCTTGGAAGACTCTCAATACTGCTGCTGATCCTGAGGAAAGTGACATTATGCTCCGGCCCCGGCACTTTTTTGTTAGTAATCCGCCTGCTTTTGTCAATGGGGCTCTGCATTGGACTCAAGCCAGAGCGCACACCGGGAACATTTCACTTCTGTCATTTGATATGTCCAATGAAGTATTCGGCAGGATAGCAATACCACCAGAAGCTTCAGCACAAACAATTGACCATCTTGCTCAAGGACATTTCATGGTTTCAAGGTACAGAGAGTCCCTTGCATATTATGAAACCTCTCGGGAGCAGAAAGGAAGTGTTGGTTGGGGTTGCCTTCTTCACATTCACATGTGGGTGATGGAAGAGTATGGTGTGCCCAAATCATGGGCTAAACTATTTGCAATATACCTGGATCTGGATCTAGGAGTTTCTAGACTGATTGGTTGTAGAAAAAGTGGTGAAGTTGTTCTCAGAGTGATGAATGACAACGGTGAATATCGGTCTGTGAACCCTAAGACCAAGCAAGTTAAGAGACTTCGAATTGAAGGACACTGGATTTATGAGGTCATGGATGCTTTAACAGAGCGCGTTGTCTTGTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

375

Amino Acids

42.49

Weight (kDa)

8.78

Isoelectric Point (pI)

40.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 452
AccB7I CCANNNNNTGG 1 cut(s) 906
AccII CGCG 1 cut(s) 1110
AciI CCGC 2 cut(s) 321, 614
AclWI GGATC 3 cut(s) 554, 942, 948
AcoI YGGCCR 1 cut(s) 225
AcsI RAATTY 1 cut(s) 488
AcuI CTGAAG 2 cut(s) 42, 723
AfaI GTAC 3 cut(s) 193, 202, 791
AfiI CCNNNNNNNGG 5 cut(s) 184, 301, 371, 906, 937
AflIII ACRYGT 1 cut(s) 870
AgsI TTSAA 4 cut(s) 145, 160, 786, 1067
AjnI CCWGG 1 cut(s) 930
AjuI GAANNNNNNNTTGG 4 cut(s) 692, 724, 829, 861
AleI CACNNNNGTG 1 cut(s) 83
AluBI AGCT 3 cut(s) 117, 414, 737
AluI AGCT 3 cut(s) 117, 414, 737
Alw26I GTCTC 2 cut(s) 290, 1048
AlwI GGATC 3 cut(s) 554, 942, 948
Ama87I CYCGRG 1 cut(s) 822
AoxI GGCC 2 cut(s) 225, 587
ApeKI GCWGC 1 cut(s) 554
ApoI RAATTY 1 cut(s) 488
Asp700I GAANNNNTTC 2 cut(s) 155, 987
AspLEI GCGC 2 cut(s) 661, 1110
AspS9I GGNCC 1 cut(s) 588
AsuC2I CCSGG 2 cut(s) 592, 667
AsuHPI GGTGA 4 cut(s) 120, 889, 992, 1025
AsuII TTCGAA 1 cut(s) 1060
AvaI CYCGRG 1 cut(s) 822
AxyI CCTNAGG 1 cut(s) 564
BaeGI GKGCMC 1 cut(s) 900
BanII GRGCYC 2 cut(s) 533, 637
BauI CACGAG 1 cut(s) 287
BbsI GAAGAC 4 cut(s) 158, 312, 462, 545
BbvI GCAGC 1 cut(s) 541
BccI CCATC 4 cut(s) 140, 217, 765, 874
BceAI ACGGC 2 cut(s) 96, 212
BcgI CGANNNNNNTGC 2 cut(s) 419, 453
BciT130I CCWGG 1 cut(s) 932
BclI TGATCA 1 cut(s) 108
BcnI CCSGG 2 cut(s) 592, 667
BcoDI GTCTC 2 cut(s) 290, 1048
BfaI CTAG 4 cut(s) 339, 404, 944, 954
BglII AGATCT 2 cut(s) 62, 510
BisI GCNGC 1 cut(s) 555
BlsI GCNGC 1 cut(s) 556
Bme1390I CCNGG 3 cut(s) 592, 667, 932
BmeT110I CYCGRG 1 cut(s) 822
BmgT120I GGNCC 1 cut(s) 588
BmiI GGNNCC 3 cut(s) 18, 335, 590
BmrFI CCNGG 3 cut(s) 592, 667, 932
BmrI ACTGGG 1 cut(s) 256
BmsI GCATC 3 cut(s) 266, 351, 1084
BmuI ACTGGG 1 cut(s) 256
BpiI GAAGAC 4 cut(s) 158, 312, 462, 545
Bpu14I TTCGAA 1 cut(s) 1060
BpuEI CTTGAG 2 cut(s) 633, 750
BpuMI CCSGG 2 cut(s) 592, 667
BsaBI GATNNNNATC 1 cut(s) 939
BsaI GGTCTC 1 cut(s) 290
BsaJI CCNNGG 2 cut(s) 525, 590
Bsc4I CCNNNNNNNGG 5 cut(s) 184, 301, 371, 906, 937
Bse1I ACTGG 2 cut(s) 262, 1079
Bse21I CCTNAGG 1 cut(s) 564
Bse8I GATNNNNATC 1 cut(s) 939
BseBI CCWGG 1 cut(s) 932
BseDI CCNNGG 2 cut(s) 525, 590
BseGI GGATG 4 cut(s) 194, 213, 257, 1099
BseJI GATNNNNATC 1 cut(s) 939
BseLI CCNNNNNNNGG 5 cut(s) 184, 301, 371, 906, 937
BseMII CTCAG 2 cut(s) 555, 1006
BseNI ACTGG 2 cut(s) 262, 1079
BseRI GAGGAG 1 cut(s) 154
BseSI GKGCMC 1 cut(s) 900
BseXI GCAGC 1 cut(s) 541
Bsh1236I CGCG 1 cut(s) 1110
BshFI GGCC 2 cut(s) 227, 589
BsiHKCI CYCGRG 1 cut(s) 822
BsiSI CCGG 3 cut(s) 586, 592, 666
BslFI GGGAC 2 cut(s) 23, 784
BslI CCNNNNNNNGG 5 cut(s) 184, 301, 371, 906, 937
BsmAI GTCTC 2 cut(s) 290, 1048
BsmFI GGGAC 2 cut(s) 23, 784
BsnI GGCC 2 cut(s) 227, 589
Bso31I GGTCTC 1 cut(s) 290
BsoBI CYCGRG 1 cut(s) 822
Bsp119I TTCGAA 1 cut(s) 1060
Bsp1286I GDGCHC 3 cut(s) 533, 637, 900
Bsp1407I TGTACA 1 cut(s) 200
Bsp143I GATC 6 cut(s) 62, 108, 510, 559, 934, 940
BspACI CCGC 2 cut(s) 321, 614
BspANI GGCC 2 cut(s) 227, 589
BspCNI CTCAG 2 cut(s) 556, 1005
BspFNI CGCG 1 cut(s) 1110
BspLI GGNNCC 3 cut(s) 18, 335, 590
BspPI GGATC 3 cut(s) 554, 942, 948
BspQI GCTCTTC 1 cut(s) 457
BspT104I TTCGAA 1 cut(s) 1060
BspTNI GGTCTC 1 cut(s) 290
BsrGI TGTACA 1 cut(s) 200
BsrI ACTGG 2 cut(s) 262, 1079
BssECI CCNNGG 2 cut(s) 525, 590
BssMI GATC 6 cut(s) 62, 108, 510, 559, 934, 940
BssSI CACGAG 1 cut(s) 287
BssT1I CCWWGG 1 cut(s) 525
Bst2BI CACGAG 1 cut(s) 287
Bst2UI CCWGG 1 cut(s) 932
Bst4CI ACNGT 1 cut(s) 1013
Bst6I CTCTTC 2 cut(s) 457, 879
BstAUI TGTACA 1 cut(s) 200
BstBI TTCGAA 1 cut(s) 1060
BstC8I GCNNGC 2 cut(s) 412, 618
BstDEI CTNAG 5 cut(s) 244, 366, 564, 992, 1035
BstF5I GGATG 4 cut(s) 194, 213, 257, 1099
BstFNI CGCG 1 cut(s) 1110
BstHHI GCGC 2 cut(s) 661, 1110
BstKTI GATC 6 cut(s) 65, 111, 513, 562, 937, 943
BstMAI GTCTC 2 cut(s) 290, 1048
BstMBI GATC 6 cut(s) 62, 108, 510, 559, 934, 940
BstNI CCWGG 1 cut(s) 932
BstNSI RCATGY 1 cut(s) 874
BstSCI CCNGG 3 cut(s) 590, 665, 930
BstSLI GKGCMC 1 cut(s) 900
BstUI CGCG 1 cut(s) 1110
BstV1I GCAGC 1 cut(s) 541
BstV2I GAAGAC 4 cut(s) 158, 312, 462, 545
BstX2I RGATCY 4 cut(s) 62, 510, 934, 940
BstYI RGATCY 4 cut(s) 62, 510, 934, 940
Bsu36I CCTNAGG 1 cut(s) 564
BsuRI GGCC 2 cut(s) 227, 589
BtsCI GGATG 4 cut(s) 194, 213, 257, 1099
BtsI GCAGTG 1 cut(s) 90
BtsIMutI CAGTG 2 cut(s) 90, 1072
Cac8I GCNNGC 2 cut(s) 412, 618
CfoI GCGC 2 cut(s) 661, 1110
Cfr13I GGNCC 1 cut(s) 588
CseI GACGC 1 cut(s) 456
Csp6I GTAC 3 cut(s) 192, 201, 790
CviAII CATG 6 cut(s) 96, 498, 778, 871, 906, 1090
CviQI GTAC 3 cut(s) 192, 201, 790
DdeI CTNAG 5 cut(s) 244, 366, 564, 992, 1035
DpnI GATC 6 cut(s) 64, 110, 512, 561, 936, 942
DpnII GATC 6 cut(s) 62, 108, 510, 559, 934, 940
DrdI GACNNNNNNGTC 1 cut(s) 452
DseDI GACNNNNNNGTC 1 cut(s) 452
EaeI YGGCCR 1 cut(s) 225
Eam1104I CTCTTC 2 cut(s) 457, 879
EarI CTCTTC 2 cut(s) 457, 879
EciI GGCGGA 1 cut(s) 603
Eco130I CCWWGG 1 cut(s) 525
Eco24I GRGCYC 2 cut(s) 533, 637
Eco31I GGTCTC 1 cut(s) 290
Eco32I GATATC 1 cut(s) 28
Eco57I CTGAAG 2 cut(s) 42, 723
Eco81I CCTNAGG 1 cut(s) 564
Eco88I CYCGRG 1 cut(s) 822
EcoRII CCWGG 1 cut(s) 930
EcoRV GATATC 1 cut(s) 28
EcoT14I CCWWGG 1 cut(s) 525
EcoT38I GRGCYC 2 cut(s) 533, 637
ErhI CCWWGG 1 cut(s) 525
FaeI CATG 6 cut(s) 99, 501, 781, 874, 909, 1093
FalI AAGNNNNNCTT 4 cut(s) 106, 138, 454, 486
FaqI GGGAC 2 cut(s) 23, 784
FatI CATG 6 cut(s) 95, 497, 777, 870, 905, 1089
FbaI TGATCA 1 cut(s) 108
Fnu4HI GCNGC 1 cut(s) 555
FokI GGATG 4 cut(s) 201, 220, 244, 1106
FriOI GRGCYC 2 cut(s) 533, 637
Fsp4HI GCNGC 1 cut(s) 555
FspBI CTAG 4 cut(s) 339, 404, 944, 954
GlaI GCGC 2 cut(s) 660, 1109
GluI GCNGC 1 cut(s) 555
HaeIII GGCC 2 cut(s) 227, 589
HapII CCGG 3 cut(s) 586, 592, 666
HgaI GACGC 1 cut(s) 456
HhaI GCGC 2 cut(s) 661, 1110
Hin1II CATG 6 cut(s) 99, 501, 781, 874, 909, 1093
Hin6I GCGC 2 cut(s) 659, 1108
HinP1I GCGC 2 cut(s) 659, 1108
HindIII AAGCTT 1 cut(s) 735
HinfI GANTC 4 cut(s) 314, 541, 646, 797
HpaII CCGG 3 cut(s) 586, 592, 666
HphI GGTGA 4 cut(s) 120, 889, 992, 1025
Hpy166II GTNNAC 2 cut(s) 78, 1030
Hpy188I TCNGA 4 cut(s) 62, 272, 347, 995
Hpy188III TCNNGA 6 cut(s) 20, 404, 563, 824, 938, 954
Hpy8I GTNNAC 2 cut(s) 78, 1030
Hpy99I CGWCG 1 cut(s) 223
HpyAV CCTTC 2 cut(s) 866, 1061
HpyCH4III ACNGT 1 cut(s) 1013
HpyCH4IV ACGT 1 cut(s) 155
HpyCH4V TGCA 3 cut(s) 640, 806, 923
HpyF3I CTNAG 5 cut(s) 244, 366, 564, 992, 1035
HpySE526I ACGT 1 cut(s) 155
Hsp92II CATG 6 cut(s) 99, 501, 781, 874, 909, 1093
HspAI GCGC 2 cut(s) 659, 1108
Ksp22I TGATCA 1 cut(s) 108
Kzo9I GATC 6 cut(s) 62, 108, 510, 559, 934, 940
LguI GCTCTTC 1 cut(s) 457
LmnI GCTCC 2 cut(s) 588, 826
Lsp1109I GCAGC 1 cut(s) 541
LweI GCATC 3 cut(s) 266, 351, 1084
MaeI CTAG 4 cut(s) 339, 404, 944, 954
MaeII ACGT 1 cut(s) 155
MaeIII GTNAC 3 cut(s) 51, 376, 572
MalI GATC 6 cut(s) 64, 110, 512, 561, 936, 942
MboI GATC 6 cut(s) 62, 108, 510, 559, 934, 940
MboII GAAGA 8 cut(s) 35, 163, 317, 462, 474, 550, 851, 896
MfeI CAATTG 1 cut(s) 750
MflI RGATCY 4 cut(s) 62, 510, 934, 940
MhlI GDGCHC 3 cut(s) 533, 637, 900
MluCI AATT 4 cut(s) 100, 488, 750, 1062
MlyI GAGTC 4 cut(s) 308, 535, 640, 806
MmeI TCCRAC 1 cut(s) 250
MnlI CCTC 7 cut(s) 175, 188, 243, 473, 559, 829, 1078
MroXI GAANNNNTTC 2 cut(s) 155, 987
MseI TTAA 2 cut(s) 1050, 1100
MslI CAYNNNNRTG 3 cut(s) 83, 869, 875
MspI CCGG 3 cut(s) 586, 592, 666
MspR9I CCNGG 3 cut(s) 592, 667, 932
MunI CAATTG 1 cut(s) 750
MvaI CCWGG 1 cut(s) 932
MvnI CGCG 1 cut(s) 1110
NciI CCSGG 2 cut(s) 592, 667
NdeII GATC 6 cut(s) 62, 108, 510, 559, 934, 940
NlaIII CATG 6 cut(s) 99, 501, 781, 874, 909, 1093
NlaIV GGNNCC 3 cut(s) 18, 335, 590
NmuCI GTSAC 1 cut(s) 572
NspI RCATGY 1 cut(s) 874
NspV TTCGAA 1 cut(s) 1060
OliI CACNNNNGTG 1 cut(s) 83
PciI ACATGT 1 cut(s) 870
PciSI GCTCTTC 1 cut(s) 457
PdmI GAANNNNTTC 2 cut(s) 155, 987
PflMI CCANNNNNTGG 1 cut(s) 906
PkrI GCNGC 1 cut(s) 556
PleI GAGTC 4 cut(s) 308, 535, 640, 805
PpsI GAGTC 4 cut(s) 308, 535, 640, 805
PscI ACATGT 1 cut(s) 870
Psp6I CCWGG 1 cut(s) 930
PspGI CCWGG 1 cut(s) 930
PspN4I GGNNCC 3 cut(s) 18, 335, 590
PspPI GGNCC 1 cut(s) 588
PsuI RGATCY 4 cut(s) 62, 510, 934, 940
RsaI GTAC 3 cut(s) 193, 202, 791
RsaNI GTAC 3 cut(s) 192, 201, 790
RseI CAYNNNNRTG 3 cut(s) 83, 869, 875
SapI GCTCTTC 1 cut(s) 457
SaqAI TTAA 2 cut(s) 1050, 1100
SatI GCNGC 1 cut(s) 555
Sau3AI GATC 6 cut(s) 62, 108, 510, 559, 934, 940
Sau96I GGNCC 1 cut(s) 588
SchI GAGTC 4 cut(s) 308, 535, 640, 806
ScrFI CCNGG 3 cut(s) 592, 667, 932
SduI GDGCHC 3 cut(s) 533, 637, 900
SfaNI GCATC 3 cut(s) 266, 351, 1084
SfuI TTCGAA 1 cut(s) 1060
SmiMI CAYNNNNRTG 3 cut(s) 83, 869, 875
SmlI CTYRAG 2 cut(s) 648, 765
SmoI CTYRAG 2 cut(s) 648, 765
Sse9I AATT 4 cut(s) 100, 488, 750, 1062
SsiI CCGC 2 cut(s) 321, 614
SspMI CTAG 4 cut(s) 339, 404, 944, 954
StyD4I CCNGG 3 cut(s) 590, 665, 930
StyI CCWWGG 1 cut(s) 525
TaaI ACNGT 1 cut(s) 1013
TaiI ACGT 1 cut(s) 158
TaqI TCGA 2 cut(s) 478, 1060
TaqII GACCGA 1 cut(s) 1011
TasI AATT 4 cut(s) 100, 488, 750, 1062
TatI WGTACW 2 cut(s) 191, 200
Tru1I TTAA 2 cut(s) 1050, 1100
Tru9I TTAA 2 cut(s) 1050, 1100
TscAI CASTG 2 cut(s) 90, 1079
TseFI GTSAC 1 cut(s) 572
TseI GCWGC 1 cut(s) 554
Tsp45I GTSAC 1 cut(s) 572
TspDTI ATGAA 7 cut(s) 114, 221, 405, 717, 766, 828, 1016
TspRI CASTG 2 cut(s) 90, 1079
Van91I CCANNNNNTGG 1 cut(s) 906
XapI RAATTY 1 cut(s) 488
XbaI TCTAGA 2 cut(s) 403, 953
XceI RCATGY 1 cut(s) 874
XmnI GAANNNNTTC 2 cut(s) 155, 987
XspI CTAG 4 cut(s) 339, 404, 944, 954
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.