FvH4_3g42390

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000068
Physical Location & Seq
Forward (+)
35385954 .. 35389915
3962 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g42390.t1

Sequence Viewer

Length: 1245 bp
ATGTCGGACTATCTCCCTCAGGAAGTCATAACCAATATATTACTTAGACTACCCATTAAATCCTTGGTCATATGCACCTCAGTCTGCAAGTCATGGATGTCCATGATTAAAGACTCGAGCTTTATTGGCGCCCACCTCAGCCGCACTATCGACTTTAACAACCACCATGGGACTCACCTCCTACTGCTCCACAGGTTTTCTAGTAAAAATTGTGGCATCAGGGGCCGCAACAGTTCAGTCCCCGGGGTAAAAGAGGACGTTTACTCTTTGCATTATGATAACAGTGGTTTTGATGATTGTTGTGAGATAGGATTTCAATCTCCAATTGCTGATGGGGACATGTATAACGAGTCTTTCCGCGTGGTTGGTATTTGTAACGGGCTGGTATGCCTTGCAGATGATTTAAACCATTATGGTTACAACTTCTTGATATGGAACCCCTCTATAAGAAAGTTAGTAACCCTTCCCAAGCCTGGCCTTAGATTTGATACTGTTGGTGGGTATGATGCTTATCATGGGTTCGCATTTGATGCTATGACCAATGACTATAAGGTCGTGAGGCTTGTTCAGTATGAATATGGATGTAATAATGAAAAAAATGAGTATCAAACTTCTGTAGAGGTTTATTCACTAGCTGCAGGCACATGGAGTAATCCTAGGCTTGTAGATCCCCAATTTATGTTATTTGGACTACAGTCACCCCAGGCTTTTGTTAATGGAGCTCTTCATTGGGTTGCACGTGGTTTTAGAAGTAGCTTATTTTGCAATATTATTTTGGCATTTGATGTGGGCAGTGAGTTATTCCGGGAGATAATGATGCCAAAGAGTTTGGATCGGGATTCATTAAGGGCCGGAAACTTGAAATTGCGATTGTCTGTTTCAGGAGATGGAAAATCCCTTGCTATGTCCATGAGGTACAAAAGTTATACTAATACCTCTTTTCTGGATGTATGGGTAATGAAAGAGTATTGTTTGGAGGAGTCGTGGACCAAATTGATAACTCTCCATCCACAAGGTCCACAAAGAAGTTTACCTAGTGCTTTATGTTTTAGGAAGAGTGGTGAAATAGTGATGGTACATGATCATCGTTATGGAGGTGAAGAAGTTAAAAATGAATTAGTTTCACTAGACCTTGTGAGCAGACAATTCAAGAATCTTGGGAGTCGTCGATATCAACATTACACCATTGATCCTTATGAAGAAAGCCTCGTCTTACTTGACAGGAATGAAGCAGTTTCTTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

415

Amino Acids

47.05

Weight (kDa)

6.5

Isoelectric Point (pI)

39.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 4 - 40 7.8e-08 F-box-like
F-box PF00646 5 - 41 8.5e-09 F-box domain
FBA_1 PF07734 86 - 361 7.2e-21 F-box associated beta propeller domain
FBA_3 PF08268 119 - 360 1.7e-17 F-box associated beta propeller domain
b-prop_At3g26010-like PF24750 119 - 335 3e-09 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 551
AccB1I GGYRCC 1 cut(s) 128
AccII CGCG 1 cut(s) 360
AciI CCGC 3 cut(s) 142, 226, 358
AclWI GGATC 3 cut(s) 662, 840, 1184
AcvI CACGTG 1 cut(s) 740
AcyI GRCGYC 1 cut(s) 129
AfaI GTAC 2 cut(s) 917, 1077
AfiI CCNNNNNNNGG 1 cut(s) 473
AflIII ACRYGT 1 cut(s) 339
AgsI TTSAA 3 cut(s) 317, 862, 1150
AjnI CCWGG 2 cut(s) 472, 702
AluBI AGCT 4 cut(s) 120, 635, 722, 756
AluI AGCT 4 cut(s) 120, 635, 722, 756
Alw21I GWGCWC 1 cut(s) 724
AlwI GGATC 3 cut(s) 662, 840, 1184
Ama87I CYCGRG 2 cut(s) 115, 242
AoxI GGCC 3 cut(s) 223, 475, 849
ApeKI GCWGC 1 cut(s) 635
AspA2I CCTAGG 1 cut(s) 656
AspLEI GCGC 1 cut(s) 131
AspS9I GGNCC 4 cut(s) 223, 849, 987, 1016
AsuC2I CCSGG 3 cut(s) 243, 244, 806
AsuHPI GGTGA 4 cut(s) 167, 690, 1073, 1109
AvaI CYCGRG 2 cut(s) 115, 242
AvaII GGWCC 2 cut(s) 987, 1016
AvrII CCTAGG 1 cut(s) 656
AxyI CCTNAGG 1 cut(s) 18
BaeI ACNNNNGTAYC 2 cut(s) 907, 940
BanI GGYRCC 1 cut(s) 128
BanII GRGCYC 1 cut(s) 724
BbrPI CACGTG 1 cut(s) 740
Bbv12I GWGCWC 1 cut(s) 724
BbvCI CCTCAGC 1 cut(s) 137
BbvI GCAGC 1 cut(s) 622
BccI CCATC 4 cut(s) 326, 881, 1014, 1066
BciT130I CCWGG 2 cut(s) 474, 704
BclI TGATCA 1 cut(s) 1081
BcnI CCSGG 3 cut(s) 243, 244, 806
BfaI CTAG 5 cut(s) 201, 632, 657, 1035, 1127
BfmI CTRYAG 3 cut(s) 615, 636, 692
BfoI RGCGCY 1 cut(s) 132
BisI GCNGC 3 cut(s) 142, 226, 636
BlnI CCTAGG 1 cut(s) 656
BlsI GCNGC 3 cut(s) 143, 227, 637
Bme1390I CCNGG 5 cut(s) 243, 244, 474, 704, 806
Bme18I GGWCC 2 cut(s) 987, 1016
BmeT110I CYCGRG 2 cut(s) 115, 242
BmgT120I GGNCC 4 cut(s) 223, 849, 987, 1016
BmiI GGNNCC 3 cut(s) 130, 224, 437
BmrFI CCNGG 5 cut(s) 243, 244, 474, 704, 806
BmsI GCATC 4 cut(s) 225, 496, 520, 807
BoxI GACNNNNGTC 1 cut(s) 694
Bpu10I CCTNAGC 1 cut(s) 137
BpuMI CCSGG 3 cut(s) 243, 244, 806
BsaAI YACGTR 1 cut(s) 740
BsaBI GATNNNNATC 2 cut(s) 316, 510
BsaHI GRCGYC 1 cut(s) 129
BsaJI CCNNGG 7 cut(s) 63, 166, 241, 242, 243, 656, 702
BsaXI ACNNNNNCTCC 2 cut(s) 968, 998
Bsc4I CCNNNNNNNGG 1 cut(s) 473
Bse21I CCTNAGG 1 cut(s) 18
Bse8I GATNNNNATC 2 cut(s) 316, 510
BseBI CCWGG 2 cut(s) 474, 704
BseDI CCNNGG 7 cut(s) 63, 166, 241, 242, 243, 656, 702
BseGI GGATG 4 cut(s) 102, 587, 952, 1006
BseJI GATNNNNATC 2 cut(s) 316, 510
BseLI CCNNNNNNNGG 1 cut(s) 473
BseMII CTCAG 3 cut(s) 32, 93, 151
BseRI GAGGAG 1 cut(s) 992
BseXI GCAGC 1 cut(s) 622
Bsh1236I CGCG 1 cut(s) 360
BshFI GGCC 3 cut(s) 225, 477, 851
BshNI GGYRCC 1 cut(s) 128
BsiHKAI GWGCWC 1 cut(s) 724
BsiHKCI CYCGRG 2 cut(s) 115, 242
BsiSI CCGG 3 cut(s) 243, 805, 852
BslFI GGGAC 3 cut(s) 184, 224, 350
BslI CCNNNNNNNGG 1 cut(s) 473
BsmFI GGGAC 3 cut(s) 184, 224, 350
BsnI GGCC 3 cut(s) 225, 477, 851
BsoBI CYCGRG 2 cut(s) 115, 242
Bsp1286I GDGCHC 1 cut(s) 724
Bsp143I GATC 4 cut(s) 667, 832, 1081, 1189
Bsp19I CCATGG 1 cut(s) 166
BspACI CCGC 3 cut(s) 142, 226, 358
BspANI GGCC 3 cut(s) 225, 477, 851
BspCNI CTCAG 3 cut(s) 31, 92, 150
BspFNI CGCG 1 cut(s) 360
BspLI GGNNCC 3 cut(s) 130, 224, 437
BspMAI CTGCAG 1 cut(s) 640
BspPI GGATC 3 cut(s) 662, 840, 1184
BspQI GCTCTTC 1 cut(s) 729
BspT107I GGYRCC 1 cut(s) 128
BssECI CCNNGG 7 cut(s) 63, 166, 241, 242, 243, 656, 702
BssMI GATC 4 cut(s) 667, 832, 1081, 1189
BssNI GRCGYC 1 cut(s) 129
BssT1I CCWWGG 3 cut(s) 63, 166, 656
Bst2UI CCWGG 2 cut(s) 474, 704
Bst4CI ACNGT 4 cut(s) 233, 284, 493, 696
Bst6I CTCTTC 2 cut(s) 729, 1049
BstACI GRCGYC 1 cut(s) 129
BstAPI GCANNNNNTGC 1 cut(s) 530
BstBAI YACGTR 1 cut(s) 740
BstC8I GCNNGC 1 cut(s) 640
BstDEI CTNAG 5 cut(s) 18, 44, 79, 137, 479
BstDSI CCRYGG 1 cut(s) 166
BstF5I GGATG 4 cut(s) 102, 587, 952, 1006
BstFNI CGCG 1 cut(s) 360
BstH2I RGCGCY 1 cut(s) 132
BstHHI GCGC 1 cut(s) 131
BstKTI GATC 4 cut(s) 670, 835, 1084, 1192
BstMBI GATC 4 cut(s) 667, 832, 1081, 1189
BstMWI GCNNNNNNNGC 4 cut(s) 126, 222, 530, 762
BstNI CCWGG 2 cut(s) 474, 704
BstNSI RCATGY 1 cut(s) 343
BstPAI GACNNNNGTC 1 cut(s) 694
BstSCI CCNGG 5 cut(s) 241, 242, 472, 702, 804
BstSFI CTRYAG 3 cut(s) 615, 636, 692
BstUI CGCG 1 cut(s) 360
BstV1I GCAGC 1 cut(s) 622
BstX2I RGATCY 1 cut(s) 667
BstYI RGATCY 1 cut(s) 667
Bsu36I CCTNAGG 1 cut(s) 18
BsuRI GGCC 3 cut(s) 225, 477, 851
BtgI CCRYGG 1 cut(s) 166
BtsCI GGATG 4 cut(s) 102, 587, 952, 1006
BtsI GCAGTG 1 cut(s) 799
BtsIMutI CAGTG 2 cut(s) 289, 799
Cac8I GCNNGC 1 cut(s) 640
CfoI GCGC 1 cut(s) 131
Cfr13I GGNCC 4 cut(s) 223, 849, 987, 1016
Cfr9I CCCGGG 1 cut(s) 242
Csp6I GTAC 2 cut(s) 916, 1076
CviAII CATG 8 cut(s) 93, 103, 167, 340, 515, 645, 910, 1079
CviQI GTAC 2 cut(s) 916, 1076
DdeI CTNAG 5 cut(s) 18, 44, 79, 137, 479
DinI GGCGCC 1 cut(s) 130
DpnI GATC 4 cut(s) 669, 834, 1083, 1191
DpnII GATC 4 cut(s) 667, 832, 1081, 1189
DraI TTTAAA 1 cut(s) 405
DrdI GACNNNNNNGTC 1 cut(s) 551
DseDI GACNNNNNNGTC 1 cut(s) 551
Eam1104I CTCTTC 2 cut(s) 729, 1049
EarI CTCTTC 2 cut(s) 729, 1049
Ecl136II GAGCTC 1 cut(s) 722
Eco130I CCWWGG 3 cut(s) 63, 166, 656
Eco24I GRGCYC 1 cut(s) 724
Eco32I GATATC 1 cut(s) 1172
Eco47I GGWCC 2 cut(s) 987, 1016
Eco53kI GAGCTC 1 cut(s) 722
Eco72I CACGTG 1 cut(s) 740
Eco81I CCTNAGG 1 cut(s) 18
Eco88I CYCGRG 2 cut(s) 115, 242
EcoICRI GAGCTC 1 cut(s) 722
EcoRII CCWGG 2 cut(s) 472, 702
EcoRV GATATC 1 cut(s) 1172
EcoT14I CCWWGG 3 cut(s) 63, 166, 656
EcoT38I GRGCYC 1 cut(s) 724
EgeI GGCGCC 1 cut(s) 130
EheI GGCGCC 1 cut(s) 130
ErhI CCWWGG 3 cut(s) 63, 166, 656
FaeI CATG 8 cut(s) 96, 106, 170, 343, 518, 648, 913, 1082
FaqI GGGAC 3 cut(s) 184, 224, 350
FatI CATG 8 cut(s) 92, 102, 166, 339, 514, 644, 909, 1078
FauNDI CATATG 1 cut(s) 71
FbaI TGATCA 1 cut(s) 1081
Fnu4HI GCNGC 3 cut(s) 142, 226, 636
FokI GGATG 4 cut(s) 109, 594, 959, 993
FriOI GRGCYC 1 cut(s) 724
Fsp4HI GCNGC 3 cut(s) 142, 226, 636
FspBI CTAG 5 cut(s) 201, 632, 657, 1035, 1127
GlaI GCGC 1 cut(s) 130
GluI GCNGC 3 cut(s) 142, 226, 636
HaeII RGCGCY 1 cut(s) 132
HaeIII GGCC 3 cut(s) 225, 477, 851
HapII CCGG 3 cut(s) 243, 805, 852
HhaI GCGC 1 cut(s) 131
Hin1I GRCGYC 1 cut(s) 129
Hin1II CATG 8 cut(s) 96, 106, 170, 343, 518, 648, 913, 1082
Hin6I GCGC 1 cut(s) 129
HinP1I GCGC 1 cut(s) 129
HinfI GANTC 7 cut(s) 113, 172, 350, 839, 980, 1153, 1162
HpaII CCGG 3 cut(s) 243, 805, 852
HphI GGTGA 4 cut(s) 167, 690, 1073, 1109
Hpy166II GTNNAC 4 cut(s) 262, 987, 1019, 1031
Hpy188I TCNGA 1 cut(s) 7
Hpy188III TCNNGA 7 cut(s) 20, 427, 556, 836, 882, 944, 1150
Hpy8I GTNNAC 4 cut(s) 262, 987, 1019, 1031
Hpy99I CGWCG 1 cut(s) 1170
HpyAV CCTTC 1 cut(s) 473
HpyCH4III ACNGT 4 cut(s) 233, 284, 493, 696
HpyCH4IV ACGT 2 cut(s) 258, 739
HpyCH4V TGCA 7 cut(s) 75, 87, 271, 395, 638, 737, 765
HpyF10VI GCNNNNNNNGC 4 cut(s) 126, 222, 530, 762
HpyF3I CTNAG 5 cut(s) 18, 44, 79, 137, 479
HpySE526I ACGT 2 cut(s) 258, 739
Hsp92I GRCGYC 1 cut(s) 129
Hsp92II CATG 8 cut(s) 96, 106, 170, 343, 518, 648, 913, 1082
HspAI GCGC 1 cut(s) 129
KasI GGCGCC 1 cut(s) 128
Ksp22I TGATCA 1 cut(s) 1081
Kzo9I GATC 4 cut(s) 667, 832, 1081, 1189
LguI GCTCTTC 1 cut(s) 729
LmnI GCTCC 2 cut(s) 192, 719
Lsp1109I GCAGC 1 cut(s) 622
LweI GCATC 4 cut(s) 225, 496, 520, 807
MaeI CTAG 5 cut(s) 201, 632, 657, 1035, 1127
MaeII ACGT 2 cut(s) 258, 739
MaeIII GTNAC 4 cut(s) 374, 416, 457, 696
MalI GATC 4 cut(s) 669, 834, 1083, 1191
MboI GATC 4 cut(s) 667, 832, 1081, 1189
MboII GAAGA 4 cut(s) 716, 1066, 1112, 1211
MfeI CAATTG 1 cut(s) 324
MflI RGATCY 1 cut(s) 667
MhlI GDGCHC 1 cut(s) 724
MluCI AATT 7 cut(s) 208, 324, 674, 863, 992, 1115, 1145
Mly113I GGCGCC 1 cut(s) 129
MlyI GAGTC 5 cut(s) 107, 166, 359, 989, 1171
MseI TTAA 7 cut(s) 57, 108, 156, 404, 714, 845, 1107
MslI CAYNNNNRTG 1 cut(s) 1089
MspI CCGG 3 cut(s) 243, 805, 852
MspR9I CCNGG 5 cut(s) 243, 244, 474, 704, 806
MunI CAATTG 1 cut(s) 324
MvaI CCWGG 2 cut(s) 474, 704
MvnI CGCG 1 cut(s) 360
MwoI GCNNNNNNNGC 4 cut(s) 126, 222, 530, 762
NarI GGCGCC 1 cut(s) 129
NciI CCSGG 3 cut(s) 243, 244, 806
NcoI CCATGG 1 cut(s) 166
NdeI CATATG 1 cut(s) 71
NdeII GATC 4 cut(s) 667, 832, 1081, 1189
NlaIII CATG 8 cut(s) 96, 106, 170, 343, 518, 648, 913, 1082
NlaIV GGNNCC 3 cut(s) 130, 224, 437
NmuCI GTSAC 1 cut(s) 696
NspI RCATGY 1 cut(s) 343
PaeR7I CTCGAG 1 cut(s) 115
PciI ACATGT 1 cut(s) 339
PciSI GCTCTTC 1 cut(s) 729
PfeI GAWTC 2 cut(s) 839, 1153
PfoI TCCNGGA 1 cut(s) 804
PkrI GCNGC 3 cut(s) 143, 227, 637
PleI GAGTC 5 cut(s) 107, 166, 358, 988, 1170
PluTI GGCGCC 1 cut(s) 132
PmaCI CACGTG 1 cut(s) 740
PmlI CACGTG 1 cut(s) 740
PpsI GAGTC 5 cut(s) 107, 166, 358, 988, 1170
Ppu21I YACGTR 1 cut(s) 740
PscI ACATGT 1 cut(s) 339
PshAI GACNNNNGTC 1 cut(s) 694
Psp124BI GAGCTC 1 cut(s) 724
Psp6I CCWGG 2 cut(s) 472, 702
PspCI CACGTG 1 cut(s) 740
PspGI CCWGG 2 cut(s) 472, 702
PspN4I GGNNCC 3 cut(s) 130, 224, 437
PspPI GGNCC 4 cut(s) 223, 849, 987, 1016
PspXI VCTCGAGB 1 cut(s) 115
PstI CTGCAG 1 cut(s) 640
PsuI RGATCY 1 cut(s) 667
RsaI GTAC 2 cut(s) 917, 1077
RsaNI GTAC 2 cut(s) 916, 1076
RseI CAYNNNNRTG 1 cut(s) 1089
SacI GAGCTC 1 cut(s) 724
SapI GCTCTTC 1 cut(s) 729
SaqAI TTAA 7 cut(s) 57, 108, 156, 404, 714, 845, 1107
SatI GCNGC 3 cut(s) 142, 226, 636
Sau3AI GATC 4 cut(s) 667, 832, 1081, 1189
Sau96I GGNCC 4 cut(s) 223, 849, 987, 1016
SchI GAGTC 5 cut(s) 107, 166, 359, 989, 1171
ScrFI CCNGG 5 cut(s) 243, 244, 474, 704, 806
SduI GDGCHC 1 cut(s) 724
SfaNI GCATC 4 cut(s) 225, 496, 520, 807
SfcI CTRYAG 3 cut(s) 615, 636, 692
SfoI GGCGCC 1 cut(s) 130
Sfr274I CTCGAG 1 cut(s) 115
SinI GGWCC 2 cut(s) 987, 1016
SlaI CTCGAG 1 cut(s) 115
SmaI CCCGGG 1 cut(s) 244
SmiMI CAYNNNNRTG 1 cut(s) 1089
SmlI CTYRAG 1 cut(s) 115
SmoI CTYRAG 1 cut(s) 115
Sse9I AATT 7 cut(s) 208, 324, 674, 863, 992, 1115, 1145
SsiI CCGC 3 cut(s) 142, 226, 358
SspDI GGCGCC 1 cut(s) 128
SspI AATATT 1 cut(s) 769
SspMI CTAG 5 cut(s) 201, 632, 657, 1035, 1127
SstI GAGCTC 1 cut(s) 724
StyD4I CCNGG 5 cut(s) 241, 242, 472, 702, 804
StyI CCWWGG 3 cut(s) 63, 166, 656
TaaI ACNGT 4 cut(s) 233, 284, 493, 696
TaiI ACGT 2 cut(s) 261, 742
TaqI TCGA 3 cut(s) 116, 150, 1168
TasI AATT 7 cut(s) 208, 324, 674, 863, 992, 1115, 1145
TauI GCSGC 2 cut(s) 144, 228
TfiI GAWTC 2 cut(s) 839, 1153
Tru1I TTAA 7 cut(s) 57, 108, 156, 404, 714, 845, 1107
Tru9I TTAA 7 cut(s) 57, 108, 156, 404, 714, 845, 1107
TscAI CASTG 2 cut(s) 289, 799
TseFI GTSAC 1 cut(s) 696
TseI GCWGC 1 cut(s) 635
Tsp45I GTSAC 1 cut(s) 696
TspDTI ATGAA 8 cut(s) 588, 606, 716, 831, 974, 1128, 1212, 1242
TspMI CCCGGG 1 cut(s) 242
TspRI CASTG 2 cut(s) 289, 799
VpaK11BI GGWCC 2 cut(s) 987, 1016
XceI RCATGY 1 cut(s) 343
XcmI CCANNNNNNNNNTGG 1 cut(s) 61
XhoI CTCGAG 1 cut(s) 115
XmaI CCCGGG 1 cut(s) 242
XmaJI CCTAGG 1 cut(s) 656
XspI CTAG 5 cut(s) 201, 632, 657, 1035, 1127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.