Rroxscaffold_4G00305020

F-box kelch-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000068
Physical Location & Seq
Reverse (-)
25675237 .. 25677343
2107 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00305020.1

Sequence Viewer

Length: 1242 bp
ATGTCAGACTACCTTCCCGAAGAAATCATACACAAAATCCTATTGAAGTTGCCTGTCAAAACCCTAATCAAATCCACCCTCGTCTGCAAGTCATGGAAGTCACTCATCAAATCCTCTACCTTCATTCAGTCCCATCTCCGCACCACAATCGACTCTAACGACCAAAACGACTCTCACCTCCTTCTTCTCAGCGCTTCCTCTTACAACCGCAGAGACGACACTAGCCATCAACATCACTGGTTGCATTGGGATAGCCCCGAATTCGGTGAATACTCCATGCTGTCTACTCCAGTCATTTTCTTGAAAAACAAACTCGTTTCCGATCTCGGTGTGGTCGGAACTAGTAATGGCTTAGTATGCCTTGAGGCTGATCAGTTCGATAGTGATCGTTCTCCCACCTTGATTTGGAACCCATCTATTAGAAAAGTTGTCATGTTGCCTACACCACCTGTCTGTTTTACCTCCACCAAGTATGACAAGTACACAACGCATGGCTTTGGCTATGATGCACATTCCAATGACTACAAGATTTTAAGAGTTGTGACTCTTCTTGATGATCATTCAGACTTGTCTCGATTCGCAACCGTGGTTCAGGTTTACTCCTTAGCCAGGGGATCCTGGAAGAGTCTTAGTGCTTCGGTTATACCTGTGGATTTGCAGGGTGGTTCCGAACGTCCTGCTTTTGTTAATGGTAATTTCCATACGCTTGAAGCCCGTTTAAGTGTATATTACAATGACCATTACGAGGAACACCATAAGTGTGGCGGAGACTCGTTCATCGGCACCTTCAATCTGGCAACTGAAGCATTTGGCGAGATAATGAGACCGGAAGCTTTGCGAGGAGGCAGATGCTCTATATCAAGATGTGGGGACTCCCTTGCTTTGATTAAGCATTATAATTATGATTTCAGAGATCTAGTTAATTGCGGTTGTGACATTTGGGTTATGAAACAATATGGGGTTGCAGAGTCGTGGACTTATTTGTTCAATATATCTGTGGTTCAGGCTAGTATATATGGTTTTAAAAGATGTGGGGAAGTTGTGCTAATGGAGAATAACGAGCGTGGTCGGTCAAGAATGATTTCGTTCGATCCTAAGACTAATCAAGTTAAAGCTTTTGGAATTGAGGATTATATTTACTACTTCATGGATTCTTTTGTAGAGAGTCTCGTCTTGCTTGATCACGCCAATGCCATTTCTTACCAAGTAGCAAGGACGAAAAAAGTAGGATGGCAACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

413

Amino Acids

46.96

Weight (kDa)

6.46

Isoelectric Point (pI)

39.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 4 - 39 9.3e-08 F-box-like
F-box PF00646 5 - 41 1.3e-09 F-box domain
FBA_3 PF08268 111 - 380 4.4e-16 F-box associated beta propeller domain
FBA_1 PF07734 113 - 377 8.9e-19 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 897
AccB1I GGYRCC 1 cut(s) 782
AccI GTMKAC 1 cut(s) 284
AciI CCGC 4 cut(s) 139, 208, 765, 927
AclWI GGATC 3 cut(s) 609, 622, 1085
AcsI RAATTY 1 cut(s) 260
AcuI CTGAAG 1 cut(s) 822
AfaI GTAC 1 cut(s) 482
AfeI AGCGCT 1 cut(s) 193
AfiI CCNNNNNNNGG 4 cut(s) 263, 405, 609, 745
AgsI TTSAA 5 cut(s) 46, 304, 710, 790, 988
AhlI ACTAGT 1 cut(s) 341
AjnI CCWGG 2 cut(s) 608, 617
AluBI AGCT 2 cut(s) 833, 1115
AluI AGCT 2 cut(s) 833, 1115
Alw26I GTCTC 5 cut(s) 207, 576, 762, 817, 1172
AlwI GGATC 3 cut(s) 609, 622, 1085
Aor51HI AGCGCT 1 cut(s) 193
ApoI RAATTY 1 cut(s) 260
Asp700I GAANNNNTTC 1 cut(s) 1081
AspLEI GCGC 1 cut(s) 194
AsuHPI GGTGA 2 cut(s) 167, 278
BamHI GGATCC 1 cut(s) 614
BanI GGYRCC 1 cut(s) 782
BarI GAAGNNNNNNTAC 2 cut(s) 12, 44
BccI CCATC 4 cut(s) 141, 234, 421, 1224
BcgI CGANNNNNNTGC 4 cut(s) 130, 164, 659, 693
BciT130I CCWGG 2 cut(s) 610, 619
BclI TGATCA 3 cut(s) 370, 556, 1180
BcoDI GTCTC 5 cut(s) 207, 576, 762, 817, 1172
BcuI ACTAGT 1 cut(s) 341
BfaI CTAG 4 cut(s) 222, 342, 917, 1008
BfoI RGCGCY 1 cut(s) 195
BglII AGATCT 1 cut(s) 913
Bme1390I CCNGG 2 cut(s) 610, 619
BmiI GGNNCC 4 cut(s) 410, 616, 667, 784
BmrFI CCNGG 2 cut(s) 610, 619
BmsI GCATC 2 cut(s) 496, 839
BpmI CTGGAG 1 cut(s) 273
Bpu10I CCTNAGC 1 cut(s) 604
BpuEI CTTGAG 1 cut(s) 383
BsaBI GATNNNNATC 1 cut(s) 384
BsaI GGTCTC 1 cut(s) 817
BsaJI CCNNGG 2 cut(s) 585, 609
BsaWI WCCGGW 1 cut(s) 826
Bsc4I CCNNNNNNNGG 4 cut(s) 263, 405, 609, 745
Bse1I ACTGG 2 cut(s) 242, 290
Bse8I GATNNNNATC 1 cut(s) 384
BseBI CCWGG 2 cut(s) 610, 619
BseDI CCNNGG 2 cut(s) 585, 609
BseGI GGATG 1 cut(s) 1235
BseJI GATNNNNATC 1 cut(s) 384
BseLI CCNNNNNNNGG 4 cut(s) 263, 405, 609, 745
BseMII CTCAG 1 cut(s) 202
BseNI ACTGG 2 cut(s) 242, 290
BseRI GAGGAG 1 cut(s) 855
BshNI GGYRCC 1 cut(s) 782
BsiSI CCGG 1 cut(s) 827
BslFI GGGAC 2 cut(s) 115, 884
BslI CCNNNNNNNGG 4 cut(s) 263, 405, 609, 745
BsmAI GTCTC 5 cut(s) 207, 576, 762, 817, 1172
BsmBI CGTCTC 1 cut(s) 207
BsmFI GGGAC 2 cut(s) 115, 884
Bso31I GGTCTC 1 cut(s) 817
Bsp143I GATC 8 cut(s) 322, 370, 385, 556, 614, 913, 1090, 1180
BspACI CCGC 4 cut(s) 139, 208, 765, 927
BspCNI CTCAG 1 cut(s) 201
BspLI GGNNCC 4 cut(s) 410, 616, 667, 784
BspPI GGATC 3 cut(s) 609, 622, 1085
BspT107I GGYRCC 1 cut(s) 782
BspTNI GGTCTC 1 cut(s) 817
BsrI ACTGG 2 cut(s) 242, 290
BssECI CCNNGG 2 cut(s) 585, 609
BssMI GATC 8 cut(s) 322, 370, 385, 556, 614, 913, 1090, 1180
Bst2UI CCWGG 2 cut(s) 610, 619
Bst4CI ACNGT 1 cut(s) 586
Bst6I CTCTTC 2 cut(s) 552, 617
BstDEI CTNAG 5 cut(s) 188, 352, 604, 629, 1095
BstDSI CCRYGG 1 cut(s) 585
BstENI CCTNNNNNAGG 1 cut(s) 607
BstF5I GGATG 1 cut(s) 1235
BstH2I RGCGCY 1 cut(s) 195
BstHHI GCGC 1 cut(s) 194
BstKTI GATC 8 cut(s) 325, 373, 388, 559, 617, 916, 1093, 1183
BstMAI GTCTC 5 cut(s) 207, 576, 762, 817, 1172
BstMBI GATC 8 cut(s) 322, 370, 385, 556, 614, 913, 1090, 1180
BstMWI GCNNNNNNNGC 2 cut(s) 357, 803
BstNI CCWGG 2 cut(s) 610, 619
BstSCI CCNGG 2 cut(s) 608, 617
BstX2I RGATCY 2 cut(s) 614, 913
BstXI CCANNNNNNTGG 1 cut(s) 761
BstYI RGATCY 2 cut(s) 614, 913
BtgI CCRYGG 1 cut(s) 585
BtsCI GGATG 1 cut(s) 1235
BtsIMutI CAGTG 1 cut(s) 235
CfoI GCGC 1 cut(s) 194
Csp6I GTAC 1 cut(s) 481
CviAII CATG 6 cut(s) 93, 277, 433, 491, 1147, 1239
CviQI GTAC 1 cut(s) 481
DdeI CTNAG 5 cut(s) 188, 352, 604, 629, 1095
DpnI GATC 8 cut(s) 324, 372, 387, 558, 616, 915, 1092, 1182
DpnII GATC 8 cut(s) 322, 370, 385, 556, 614, 913, 1090, 1180
DraI TTTAAA 1 cut(s) 1024
Eam1104I CTCTTC 2 cut(s) 552, 617
EarI CTCTTC 2 cut(s) 552, 617
EciI GGCGGA 1 cut(s) 780
Eco31I GGTCTC 1 cut(s) 817
Eco47III AGCGCT 1 cut(s) 193
Eco57I CTGAAG 1 cut(s) 822
EcoNI CCTNNNNNAGG 1 cut(s) 607
EcoRI GAATTC 1 cut(s) 260
EcoRII CCWGG 2 cut(s) 608, 617
Esp3I CGTCTC 1 cut(s) 207
FaeI CATG 6 cut(s) 96, 280, 436, 494, 1150, 1242
FaqI GGGAC 2 cut(s) 115, 884
FatI CATG 6 cut(s) 92, 276, 432, 490, 1146, 1238
FbaI TGATCA 3 cut(s) 370, 556, 1180
FblI GTMKAC 1 cut(s) 284
FspBI CTAG 4 cut(s) 222, 342, 917, 1008
GlaI GCGC 1 cut(s) 193
GsuI CTGGAG 1 cut(s) 273
HaeII RGCGCY 1 cut(s) 195
HapII CCGG 1 cut(s) 827
HhaI GCGC 1 cut(s) 194
Hin1II CATG 6 cut(s) 96, 280, 436, 494, 1150, 1242
Hin6I GCGC 1 cut(s) 192
HinP1I GCGC 1 cut(s) 192
HindIII AAGCTT 2 cut(s) 831, 1113
HpaII CCGG 1 cut(s) 827
HphI GGTGA 2 cut(s) 167, 278
Hpy166II GTNNAC 4 cut(s) 285, 483, 598, 975
Hpy188I TCNGA 6 cut(s) 7, 322, 338, 565, 670, 911
Hpy188III TCNNGA 6 cut(s) 17, 301, 551, 573, 861, 1074
Hpy8I GTNNAC 4 cut(s) 285, 483, 598, 975
HpyAV CCTTC 4 cut(s) 23, 130, 191, 796
HpyCH4III ACNGT 1 cut(s) 586
HpyCH4IV ACGT 1 cut(s) 673
HpyCH4V TGCA 5 cut(s) 87, 244, 509, 658, 965
HpyF10VI GCNNNNNNNGC 2 cut(s) 357, 803
HpyF3I CTNAG 5 cut(s) 188, 352, 604, 629, 1095
HpySE526I ACGT 1 cut(s) 673
Hsp92II CATG 6 cut(s) 96, 280, 436, 494, 1150, 1242
HspAI GCGC 1 cut(s) 192
Ksp22I TGATCA 3 cut(s) 370, 556, 1180
Kzo9I GATC 8 cut(s) 322, 370, 385, 556, 614, 913, 1090, 1180
LweI GCATC 2 cut(s) 496, 839
MaeI CTAG 4 cut(s) 222, 342, 917, 1008
MaeII ACGT 1 cut(s) 673
MaeIII GTNAC 3 cut(s) 99, 541, 932
MalI GATC 8 cut(s) 324, 372, 387, 558, 616, 915, 1092, 1182
MboI GATC 8 cut(s) 322, 370, 385, 556, 614, 913, 1090, 1180
MboII GAAGA 4 cut(s) 32, 176, 539, 634
MflI RGATCY 2 cut(s) 614, 913
MluCI AATT 5 cut(s) 260, 694, 898, 922, 1122
MlyI GAGTC 8 cut(s) 146, 164, 538, 634, 764, 866, 977, 1174
MmeI TCCRAC 1 cut(s) 316
MroXI GAANNNNTTC 1 cut(s) 1081
MseI TTAA 7 cut(s) 533, 687, 719, 888, 921, 1023, 1110
MslI CAYNNNNRTG 3 cut(s) 516, 759, 1188
MspI CCGG 1 cut(s) 827
MspR9I CCNGG 2 cut(s) 610, 619
MvaI CCWGG 2 cut(s) 610, 619
MwoI GCNNNNNNNGC 2 cut(s) 357, 803
NdeII GATC 8 cut(s) 322, 370, 385, 556, 614, 913, 1090, 1180
NlaIII CATG 6 cut(s) 96, 280, 436, 494, 1150, 1242
NlaIV GGNNCC 4 cut(s) 410, 616, 667, 784
NmuCI GTSAC 3 cut(s) 99, 541, 932
PcsI WCGNNNNNNNCGW 2 cut(s) 156, 165
PdmI GAANNNNTTC 1 cut(s) 1081
PfeI GAWTC 2 cut(s) 576, 1151
PfoI TCCNGGA 1 cut(s) 617
PleI GAGTC 8 cut(s) 146, 164, 538, 633, 764, 866, 976, 1173
PpsI GAGTC 8 cut(s) 146, 164, 538, 633, 764, 866, 976, 1173
PsiI TTATAA 1 cut(s) 897
Psp6I CCWGG 2 cut(s) 608, 617
PspGI CCWGG 2 cut(s) 608, 617
PspN4I GGNNCC 4 cut(s) 410, 616, 667, 784
PsuI RGATCY 2 cut(s) 614, 913
RsaI GTAC 1 cut(s) 482
RsaNI GTAC 1 cut(s) 481
RseI CAYNNNNRTG 3 cut(s) 516, 759, 1188
SaqAI TTAA 7 cut(s) 533, 687, 719, 888, 921, 1023, 1110
Sau3AI GATC 8 cut(s) 322, 370, 385, 556, 614, 913, 1090, 1180
SchI GAGTC 8 cut(s) 146, 164, 538, 634, 764, 866, 977, 1174
ScrFI CCNGG 2 cut(s) 610, 619
SfaNI GCATC 2 cut(s) 496, 839
SmiMI CAYNNNNRTG 3 cut(s) 516, 759, 1188
SmlI CTYRAG 1 cut(s) 362
SmoI CTYRAG 1 cut(s) 362
SpeI ACTAGT 1 cut(s) 341
Sse9I AATT 5 cut(s) 260, 694, 898, 922, 1122
SsiI CCGC 4 cut(s) 139, 208, 765, 927
SspMI CTAG 4 cut(s) 222, 342, 917, 1008
StyD4I CCNGG 2 cut(s) 608, 617
TaaI ACNGT 1 cut(s) 586
TaiI ACGT 1 cut(s) 676
TaqI TCGA 4 cut(s) 150, 378, 574, 1089
TaqII GACCGA 1 cut(s) 1059
TasI AATT 5 cut(s) 260, 694, 898, 922, 1122
TatI WGTACW 1 cut(s) 480
TfiI GAWTC 2 cut(s) 576, 1151
Tru1I TTAA 7 cut(s) 533, 687, 719, 888, 921, 1023, 1110
Tru9I TTAA 7 cut(s) 533, 687, 719, 888, 921, 1023, 1110
TscAI CASTG 1 cut(s) 242
TseFI GTSAC 3 cut(s) 99, 541, 932
Tsp45I GTSAC 3 cut(s) 99, 541, 932
TspDTI ATGAA 4 cut(s) 112, 766, 962, 1135
TspRI CASTG 1 cut(s) 242
XagI CCTNNNNNAGG 1 cut(s) 607
XapI RAATTY 1 cut(s) 260
XmiI GTMKAC 1 cut(s) 284
XmnI GAANNNNTTC 1 cut(s) 1081
XspI CTAG 4 cut(s) 222, 342, 917, 1008
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.