FvH4_3g16860

F-box kelch-repeat protein At3g23880-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000068
Physical Location & Seq
Reverse (-)
10649364 .. 10652269
2906 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g16860.t2

Sequence Viewer

Length: 1281 bp
ATGTGGGAGGATTCATGTGAAGAAGGTAAGACTCTCTTGACCCCTGCCTCCATCTCTAAGCTTTCTTTGGCCTTCAAGAATTTGATCAAAGATTTTCCTCAAGAACTCATACATGATGTCCTAATCAGACTACCCATCAAACCTCTAGTCAAATGCACTTCAGTCTGCAAGTCATGGAGGACCATCATCAAAGACCCAACCTTTATTCTCACCCACCTCACCCACAAACGTAGCTTCAATACCCAGAATGCCACTCACCTCCTACTACTCCACACTGTGTTTGGTGAAGACCTTTACCATGTTTTGGGCAAACCCCACGTAGAAGGGTTCAAGGAAGACCTGTACTCTTTGCATTATGATAATTCTGCTTTTGGGGAGTATTGTAAGATTGAATTTCCCATTGGTCTTAAGCAGATTCTGGTGAATCAGTGTTTTCGTATGGTGGCTAGTTGTAATGGGTTGGTGTGTCTTTCTGATGATTTAGAGCTTTATGCTTATAGCTTCGTTTTGTGGAACCCTTGTGTGAGGAAGTATGTGATTCTTCCTGATCCCCTTGTTAAGTATTGTAGTCATGGTGGGTATGAGGCTACCATTGGTCTTGGTTATGATGCTGTGACCAATGACTTTAAGGTTGTGAGACTTGCTACTCTTATTGATGTCAATGAAAGAGTTTATGACTGCCCGACTATAGCGCAGGTTTATTCACTGGCAAAGGGGTGTTGGAGTAGGCTTCGTTCTGATCTTCCTCCATGTCAAATCTGTGGCTGCTCGTCACAAGCTTTTGTTAATGGAGTGCTTCACTGGTTGGCTTTACGTCTCACTGATGGTGCTTATAGCTACTTTGTTTTGACATTTGATGTGGGCGTGGAGTCCTTTGGAGAGATGATGTTGCCAAAGAATTTCAAATTGGATGGGTCATTGGCATTGCGGTTGTCTGTTTCCGGGGACAAAAAGTCCATTGCTCTGTTTGCAAGGTGCCAGAGTGTCACTGATTCCTTTCTTGATATATGGCTGATGGGAGAATATTGTGTGGAGAAGTCGTGGACCAAATTGATGATTCTCACTCCACAAGGTCCGGAGAGGAGTTTACGGGGGGCACTATGTTTTAGGAAGAGTGGAGAAGTGGTGTTGGCACGTGAAGATGATCTTGAACTAGTTTCAGTTGACCTGGTGAGCAAACAGTTTAAAAGTCTTGGGGTTGCAGGAGGTCAGCTTTGTGCTGTTCTCCCTTATGAAGAAAGCCTTGTTTTGCTTGACAGCAAGGATGCAGCTTCTTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBA_1

Protein Analysis

427

Amino Acids

47.77

Weight (kDa)

6.09

Isoelectric Point (pI)

30.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 30 - 68 2e-08 F-box domain
F-box-like PF12937 32 - 67 1.3e-06 F-box-like
FBA_1 PF07734 144 - 359 5e-23 F-box associated beta propeller domain
FBA_3 PF08268 144 - 391 2.8e-18 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 685
AccB1I GGYRCC 1 cut(s) 975
AccB7I CCANNNNNTGG 1 cut(s) 304
AccIII TCCGGA 1 cut(s) 1075
AciI CCGC 1 cut(s) 928
AclWI GGATC 1 cut(s) 542
AcsI RAATTY 3 cut(s) 79, 392, 898
AcuI CTGAAG 1 cut(s) 144
AcvI CACGTG 1 cut(s) 1136
AdeI CACNNNGTG 1 cut(s) 277
AfaI GTAC 1 cut(s) 344
AfiI CCNNNNNNNGG 1 cut(s) 304
AflII CTTAAG 1 cut(s) 407
AgsI TTSAA 6 cut(s) 76, 238, 331, 392, 904, 1151
AhdI GACNNNNNGTC 1 cut(s) 952
AhlI ACTAGT 1 cut(s) 1153
AjnI CCWGG 1 cut(s) 1167
AjuI GAANNNNNNNTTGG 4 cut(s) 384, 416, 890, 922
AluBI AGCT 8 cut(s) 61, 234, 487, 501, 779, 837, 1213, 1271
AluI AGCT 8 cut(s) 61, 234, 487, 501, 779, 837, 1213, 1271
Alw26I GTCTC 2 cut(s) 631, 821
AlwI GGATC 1 cut(s) 542
AlwNI CAGNNNCTG 1 cut(s) 418
Aor13HI TCCGGA 1 cut(s) 1075
AoxI GGCC 1 cut(s) 69
ApeKI GCWGC 2 cut(s) 765, 1268
ApoI RAATTY 3 cut(s) 79, 392, 898
ArsI GACNNNNNNTTYG 2 cut(s) 132, 164
AspLEI GCGC 1 cut(s) 694
AspS9I GGNCC 3 cut(s) 180, 1044, 1073
AsuC2I CCSGG 1 cut(s) 943
AsuHPI GGTGA 6 cut(s) 202, 211, 248, 296, 433, 1183
AvaII GGWCC 3 cut(s) 180, 1044, 1073
BaeGI GKGCMC 1 cut(s) 1099
BanI GGYRCC 1 cut(s) 975
BbrPI CACGTG 1 cut(s) 1136
BbsI GAAGAC 2 cut(s) 294, 342
BbvI GCAGC 1 cut(s) 752
BccI CCATC 6 cut(s) 59, 143, 191, 818, 905, 1009
BciT130I CCWGG 1 cut(s) 1169
BclI TGATCA 1 cut(s) 84
BcnI CCSGG 1 cut(s) 943
BcoDI GTCTC 2 cut(s) 631, 821
BcuI ACTAGT 1 cut(s) 1153
BfaI CTAG 3 cut(s) 146, 447, 1154
BfmI CTRYAG 1 cut(s) 687
BfrI CTTAAG 1 cut(s) 407
BfuAI ACCTGC 1 cut(s) 685
BisI GCNGC 2 cut(s) 766, 1269
BlsI GCNGC 2 cut(s) 767, 1270
Bme1390I CCNGG 2 cut(s) 943, 1169
Bme18I GGWCC 3 cut(s) 180, 1044, 1073
BmeRI GACNNNNNGTC 1 cut(s) 952
BmgT120I GGNCC 3 cut(s) 180, 1044, 1073
BmiI GGNNCC 2 cut(s) 515, 977
BmrFI CCNGG 2 cut(s) 943, 1169
BmsI GCATC 2 cut(s) 598, 1255
BpiI GAAGAC 2 cut(s) 294, 342
BpuEI CTTGAG 1 cut(s) 84
BpuMI CCSGG 1 cut(s) 943
BsaAI YACGTR 2 cut(s) 319, 1136
BsaJI CCNNGG 1 cut(s) 942
BsaWI WCCGGW 1 cut(s) 1075
BsaXI ACNNNNNCTCC 4 cut(s) 1025, 1055, 1110, 1140
Bsc4I CCNNNNNNNGG 1 cut(s) 304
Bse1I ACTGG 2 cut(s) 711, 806
Bse3DI GCAATG 2 cut(s) 923, 957
BseAI TCCGGA 1 cut(s) 1075
BseBI CCWGG 1 cut(s) 1169
BseDI CCNNGG 1 cut(s) 942
BseGI GGATG 2 cut(s) 916, 1270
BseLI CCNNNNNNNGG 1 cut(s) 304
BseMI GCAATG 2 cut(s) 923, 957
BseNI ACTGG 2 cut(s) 711, 806
BseRI GAGGAG 1 cut(s) 1096
BseSI GKGCMC 1 cut(s) 1099
BseXI GCAGC 1 cut(s) 752
BshFI GGCC 1 cut(s) 71
BshNI GGYRCC 1 cut(s) 975
BsiSI CCGG 2 cut(s) 942, 1076
BslFI GGGAC 1 cut(s) 959
BslI CCNNNNNNNGG 1 cut(s) 304
BsmAI GTCTC 2 cut(s) 631, 821
BsmBI CGTCTC 1 cut(s) 821
BsmFI GGGAC 1 cut(s) 959
BsmI GAATGC 1 cut(s) 253
BsnI GGCC 1 cut(s) 71
Bsp1286I GDGCHC 1 cut(s) 1099
Bsp13I TCCGGA 1 cut(s) 1075
Bsp143I GATC 4 cut(s) 84, 547, 739, 1144
BspACI CCGC 1 cut(s) 928
BspANI GGCC 1 cut(s) 71
BspEI TCCGGA 1 cut(s) 1075
BspLI GGNNCC 2 cut(s) 515, 977
BspMI ACCTGC 1 cut(s) 685
BspPI GGATC 1 cut(s) 542
BspT107I GGYRCC 1 cut(s) 975
BspTI CTTAAG 1 cut(s) 407
BsrDI GCAATG 2 cut(s) 923, 957
BsrI ACTGG 2 cut(s) 711, 806
BssECI CCNNGG 1 cut(s) 942
BssMI GATC 4 cut(s) 84, 547, 739, 1144
Bst2UI CCWGG 1 cut(s) 1169
Bst4CI ACNGT 2 cut(s) 277, 1182
Bst6I CTCTTC 1 cut(s) 1106
BstAFI CTTAAG 1 cut(s) 407
BstBAI YACGTR 2 cut(s) 319, 1136
BstDEI CTNAG 1 cut(s) 57
BstF5I GGATG 2 cut(s) 916, 1270
BstHHI GCGC 1 cut(s) 694
BstKTI GATC 4 cut(s) 87, 550, 742, 1147
BstMAI GTCTC 2 cut(s) 631, 821
BstMBI GATC 4 cut(s) 84, 547, 739, 1144
BstMWI GCNNNNNNNGC 1 cut(s) 968
BstNI CCWGG 1 cut(s) 1169
BstSCI CCNGG 2 cut(s) 941, 1167
BstSFI CTRYAG 1 cut(s) 687
BstSLI GKGCMC 1 cut(s) 1099
BstV1I GCAGC 1 cut(s) 752
BstV2I GAAGAC 2 cut(s) 294, 342
BsuRI GGCC 1 cut(s) 71
BtsCI GGATG 2 cut(s) 916, 1270
BtsIMutI CAGTG 6 cut(s) 273, 434, 704, 799, 819, 987
BveI ACCTGC 1 cut(s) 685
CaiI CAGNNNCTG 1 cut(s) 418
CfoI GCGC 1 cut(s) 694
Cfr13I GGNCC 3 cut(s) 180, 1044, 1073
CsiI ACCWGGT 1 cut(s) 1167
Csp6I GTAC 1 cut(s) 343
CviAII CATG 6 cut(s) 15, 113, 174, 299, 572, 750
CviQI GTAC 1 cut(s) 343
DdeI CTNAG 1 cut(s) 57
DpnI GATC 4 cut(s) 86, 549, 741, 1146
DpnII GATC 4 cut(s) 84, 547, 739, 1144
DraI TTTAAA 1 cut(s) 1186
DraIII CACNNNGTG 1 cut(s) 277
DriI GACNNNNNGTC 1 cut(s) 952
Eam1104I CTCTTC 1 cut(s) 1106
Eam1105I GACNNNNNGTC 1 cut(s) 952
EarI CTCTTC 1 cut(s) 1106
Eco47I GGWCC 3 cut(s) 180, 1044, 1073
Eco57I CTGAAG 1 cut(s) 144
Eco72I CACGTG 1 cut(s) 1136
EcoRII CCWGG 1 cut(s) 1167
Esp3I CGTCTC 1 cut(s) 821
FaeI CATG 6 cut(s) 18, 116, 177, 302, 575, 753
FalI AAGNNNNNCTT 6 cut(s) 20, 52, 1131, 1163, 1227, 1259
FaqI GGGAC 1 cut(s) 959
FatI CATG 6 cut(s) 14, 112, 173, 298, 571, 749
FbaI TGATCA 1 cut(s) 84
Fnu4HI GCNGC 2 cut(s) 766, 1269
FokI GGATG 2 cut(s) 923, 1277
Fsp4HI GCNGC 2 cut(s) 766, 1269
FspBI CTAG 3 cut(s) 146, 447, 1154
GlaI GCGC 1 cut(s) 693
GluI GCNGC 2 cut(s) 766, 1269
HaeIII GGCC 1 cut(s) 71
HapII CCGG 2 cut(s) 942, 1076
HhaI GCGC 1 cut(s) 694
Hin1II CATG 6 cut(s) 18, 116, 177, 302, 575, 753
Hin6I GCGC 1 cut(s) 692
HinP1I GCGC 1 cut(s) 692
HincII GTYRAC 1 cut(s) 1165
HindII GTYRAC 1 cut(s) 1165
HindIII AAGCTT 2 cut(s) 59, 777
HinfI GANTC 8 cut(s) 11, 31, 415, 424, 538, 869, 992, 1057
HpaII CCGG 2 cut(s) 942, 1076
HphI GGTGA 6 cut(s) 202, 211, 248, 296, 433, 1183
Hpy166II GTNNAC 3 cut(s) 1044, 1088, 1165
Hpy188I TCNGA 3 cut(s) 128, 475, 739
Hpy188III TCNNGA 7 cut(s) 37, 76, 101, 545, 1001, 1076, 1148
Hpy8I GTNNAC 3 cut(s) 1044, 1088, 1165
HpyAV CCTTC 3 cut(s) 17, 82, 317
HpyCH4III ACNGT 2 cut(s) 277, 1182
HpyCH4IV ACGT 4 cut(s) 229, 318, 814, 1135
HpyCH4V TGCA 6 cut(s) 156, 168, 352, 971, 1202, 1268
HpyF10VI GCNNNNNNNGC 1 cut(s) 968
HpyF3I CTNAG 1 cut(s) 57
HpySE526I ACGT 4 cut(s) 229, 318, 814, 1135
Hsp92II CATG 6 cut(s) 18, 116, 177, 302, 575, 753
HspAI GCGC 1 cut(s) 692
Kpn2I TCCGGA 1 cut(s) 1075
Ksp22I TGATCA 1 cut(s) 84
Kzo9I GATC 4 cut(s) 84, 547, 739, 1144
Lsp1109I GCAGC 1 cut(s) 752
LweI GCATC 2 cut(s) 598, 1255
MabI ACCWGGT 1 cut(s) 1167
MaeI CTAG 3 cut(s) 146, 447, 1154
MaeII ACGT 4 cut(s) 229, 318, 814, 1135
MaeIII GTNAC 3 cut(s) 613, 771, 985
MalI GATC 4 cut(s) 86, 549, 741, 1146
MboI GATC 4 cut(s) 84, 547, 739, 1144
MboII GAAGA 8 cut(s) 32, 299, 347, 533, 734, 1123, 1151, 1247
MhlI GDGCHC 1 cut(s) 1099
MluCI AATT 6 cut(s) 79, 361, 392, 898, 905, 1049
MlyI GAGTC 2 cut(s) 25, 878
MmeI TCCRAC 1 cut(s) 701
MroI TCCGGA 1 cut(s) 1075
MseI TTAA 5 cut(s) 408, 558, 627, 786, 1185
MspCI CTTAAG 1 cut(s) 407
MspI CCGG 2 cut(s) 942, 1076
MspR9I CCNGG 2 cut(s) 943, 1169
Mva1269I GAATGC 1 cut(s) 253
MvaI CCWGG 1 cut(s) 1169
MwoI GCNNNNNNNGC 1 cut(s) 968
NciI CCSGG 1 cut(s) 943
NdeII GATC 4 cut(s) 84, 547, 739, 1144
NlaIII CATG 6 cut(s) 18, 116, 177, 302, 575, 753
NlaIV GGNNCC 2 cut(s) 515, 977
NmuCI GTSAC 3 cut(s) 613, 771, 985
PctI GAATGC 1 cut(s) 253
PfeI GAWTC 6 cut(s) 11, 415, 424, 538, 992, 1057
PflMI CCANNNNNTGG 1 cut(s) 304
PkrI GCNGC 2 cut(s) 767, 1270
PleI GAGTC 2 cut(s) 25, 877
PmaCI CACGTG 1 cut(s) 1136
PmlI CACGTG 1 cut(s) 1136
PpsI GAGTC 2 cut(s) 25, 877
Ppu21I YACGTR 2 cut(s) 319, 1136
Psp6I CCWGG 1 cut(s) 1167
PspCI CACGTG 1 cut(s) 1136
PspGI CCWGG 1 cut(s) 1167
PspN4I GGNNCC 2 cut(s) 515, 977
PspPI GGNCC 3 cut(s) 180, 1044, 1073
PsrI GAACNNNNNNTAC 2 cut(s) 718, 750
PstNI CAGNNNCTG 1 cut(s) 418
RsaI GTAC 1 cut(s) 344
RsaNI GTAC 1 cut(s) 343
SaqAI TTAA 5 cut(s) 408, 558, 627, 786, 1185
SatI GCNGC 2 cut(s) 766, 1269
Sau3AI GATC 4 cut(s) 84, 547, 739, 1144
Sau96I GGNCC 3 cut(s) 180, 1044, 1073
SchI GAGTC 2 cut(s) 25, 878
ScrFI CCNGG 2 cut(s) 943, 1169
SduI GDGCHC 1 cut(s) 1099
SexAI ACCWGGT 1 cut(s) 1167
SfaNI GCATC 2 cut(s) 598, 1255
SfcI CTRYAG 1 cut(s) 687
SinI GGWCC 3 cut(s) 180, 1044, 1073
SmlI CTYRAG 2 cut(s) 99, 407
SmoI CTYRAG 2 cut(s) 99, 407
SpeI ACTAGT 1 cut(s) 1153
Sse9I AATT 6 cut(s) 79, 361, 392, 898, 905, 1049
SsiI CCGC 1 cut(s) 928
SspI AATATT 1 cut(s) 1025
SspMI CTAG 3 cut(s) 146, 447, 1154
StyD4I CCNGG 2 cut(s) 941, 1167
TaaI ACNGT 2 cut(s) 277, 1182
TaiI ACGT 4 cut(s) 232, 321, 817, 1138
TasI AATT 6 cut(s) 79, 361, 392, 898, 905, 1049
TatI WGTACW 1 cut(s) 342
TfiI GAWTC 6 cut(s) 11, 415, 424, 538, 992, 1057
Tru1I TTAA 5 cut(s) 408, 558, 627, 786, 1185
Tru9I TTAA 5 cut(s) 408, 558, 627, 786, 1185
TscAI CASTG 6 cut(s) 280, 434, 711, 806, 826, 994
TseFI GTSAC 3 cut(s) 613, 771, 985
TseI GCWGC 2 cut(s) 765, 1268
Tsp45I GTSAC 3 cut(s) 613, 771, 985
TspDTI ATGAA 2 cut(s) 678, 1248
TspRI CASTG 6 cut(s) 280, 434, 711, 806, 826, 994
Van91I CCANNNNNTGG 1 cut(s) 304
Vha464I CTTAAG 1 cut(s) 407
VpaK11BI GGWCC 3 cut(s) 180, 1044, 1073
XapI RAATTY 3 cut(s) 79, 392, 898
XcmI CCANNNNNNNNNTGG 1 cut(s) 278
XspI CTAG 3 cut(s) 146, 447, 1154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.