Prupe.1G172200_v2.0.a1

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000068
Physical Location & Seq
Forward (+)
14394760 .. 14395955
1196 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G172200.1

Sequence Viewer

Length: 1113 bp
ATGGACTCCACATCTTCGTCGAAACTCACCTACATTCCTGAAGAAATTGTACGTGAAATCCTCCTGAGGTTGCCGGCCAAATCTTTAGTCATGTGCATTGCGGTGTGCAAGTCATGGAGTTTCCTGATCAAAAGATGTAACTTCATTGACGCCCATCTCAGCCGCAAATTATCATTCCAATCCAACCACCAAATTGTCAATGGTGCTGCTGACTATATTACCGAGCTTATGAATCCGCCAATTTCAAACGAAAACACTGGTTTTGACATGGTCCAAACTCGTAACGGGCTTATATGCCTTACTTGTTCTAAGGATGATGACATAGCTGCGACTGACATCTTTCTTTGGAACCCTTCAATTAGAAGGTATGTGGTGTTGCCTAGGCCTAATTTTATTGTATATCTAAAAAATTATTATAACATTGTTCGTCACTACTTTGGCTATGATTCTCACACCAACGACTATAAGGTTTTGAGATGTGTGAGTAATCATTCTACCCTAGTTGCGGTTGAGATTTACTCCTTAGCCAGGGGCTCCTGGAAAACCCTTACCGCGTCAGCTCCTGCATATTTTGGGTTGGGCGCTGCTACATGGCCTTTCTTTTACTGGACTGTTGTCAATGATGCGCTGCATTGGGTTCGAGTCCGTGAAAGAAGAGGGAAGGACCTTGTCATTGTGTCCTTTGATATAAGCACTGAATTATTTGGCGAGATAATGATGCCTCAAGGTGTGAGAAAAATAGACTATCCATACGTGGACTGCAACATATGGATTTCAAAACATAAGGGGTCCGTTGCCCTGCTCGAGTGTAGCAATATGTTCATCGAAAGTTCTGAGACTCAATTTCACTTGTGGGTCATGGAAGAGTATGGTGTGGTGGAATCCTGGACCAAATTGTATACTTATTCTATGGCAGAGTATTTTTTATTCTCTCTTGGTTTTAACATCAGTCACGAACATGTGTTTATGCCTGATATCCGTAAAACTCTACCTCCACCTCCACTGAAGAGCCTTGGCAATGGGGAGAGCCAGAAAACTCATCGAGGGGACATAATGGATTTTTTTGTAGAGAGCCTTGTCTTACTTGGCCACCCCAATGCCATTTCCTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBA_1

Protein Analysis

371

Amino Acids

42.56

Weight (kDa)

6.63

Isoelectric Point (pI)

37.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000068)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g08281 FvH4_1g22270 FvH4_1g22290 FvH4_1g26450 FvH4_3g16521 FvH4_3g16840 FvH4_3g16850 FvH4_3g16850 FvH4_3g16860 FvH4_3g16860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18860 FvH4_3g18870 FvH4_3g18890 FvH4_3g18890 FvH4_3g18890 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18910 FvH4_3g18911 FvH4_3g18920 FvH4_3g18920 FvH4_3g18920 FvH4_3g18950 FvH4_3g18950 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18960 FvH4_3g18970 FvH4_3g18971 FvH4_3g18972 FvH4_3g22371 FvH4_3g33911 FvH4_3g39320 FvH4_3g39330 FvH4_3g41891 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g41900 FvH4_3g42380 FvH4_3g42380 FvH4_3g42380 FvH4_3g42390 FvH4_5g11821 FvH4_5g11823 FvH4_5g11830 FvH4_5g15943 FvH4_5g15980 FvH4_5g29450 FvH4_5g35130 FvH4_6g02391 FvH4_6g25310 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_6g32080 FvH4_7g06030 FvH4_7g06030 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11650 FvH4_7g11670 FvH4_7g11690 FvH4_7g11770
malus_domestica MD03G1027200.v1.1 MD03G1027800.v1.1 MD03G1027900.v1.1 MD03G1028000.v1.1 MD03G1028100.v1.1 MD03G1028200.v1.1 MD03G1028300.v1.1 MD03G1028400.v1.1 MD05G1165700.v1.1 MD05G1206600.v1.1 MD09G1091100.v1.1 MD11G1031100.v1.1 MD11G1031400.v1.1 MD11G1031700.v1.1 MD12G1183200.v1.1 MD13G1129500.v1.1 MD15G1381400.v1.1 MD16G1129700.v1.1
prunus_persica Prupe.1G172200_v2.0.a1 Prupe.1G172300_v2.0.a1 Prupe.2G255600_v2.0.a1 Prupe.4G150700_v2.0.a1 Prupe.4G150900_v2.0.a1 Prupe.4G151000_v2.0.a1 Prupe.4G151100_v2.0.a1 Prupe.4G156000_v2.0.a1 Prupe.4G190200_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G210300_v2.0.a1 Prupe.4G221400_v2.0.a1 Prupe.4G221500_v2.0.a1 Prupe.5G081800_v2.0.a1 Prupe.5G081900_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G096300_v2.0.a1 Prupe.6G287700_v2.0.a1 Prupe.6G294100_v2.0.a1 Prupe.8G003300_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G042400_v2.0.a1 Prupe.8G211600_v2.0.a1 Prupe.8G211700_v2.0.a1 Prupe.8G212800_v2.0.a1 Prupe.8G212900_v2.0.a1
pyrus_communis pycom03g02220 pycom03g02240 pycom03g02250 pycom03g02280 pycom03g02290 pycom03g02300 pycom04g15010 pycom05g19280 pycom08g08850 pycom09g01650 pycom09g01680 pycom11g02670 pycom11g23890 pycom13g11270 pycom13g25200 pycom16g10990
rosa_chinensis RchiOBHm_Chr1g0348511 RchiOBHm_Chr1g0350191 RchiOBHm_Chr2g0116421 RchiOBHm_Chr2g0116451 RchiOBHm_Chr2g0159381 RchiOBHm_Chr3g0482231 RchiOBHm_Chr3g0482251 RchiOBHm_Chr5g0003271 RchiOBHm_Chr5g0028051 RchiOBHm_Chr5g0030021 RchiOBHm_Chr5g0030031 RchiOBHm_Chr5g0031731 RchiOBHm_Chr5g0031741 RchiOBHm_Chr5g0031751 RchiOBHm_Chr5g0031761 RchiOBHm_Chr5g0031771 RchiOBHm_Chr5g0031801 RchiOBHm_Chr5g0039041 RchiOBHm_Chr5g0057531 RchiOBHm_Chr5g0061121 RchiOBHm_Chr5g0067481 RchiOBHm_Chr5g0067551 RchiOBHm_Chr5g0070761 RchiOBHm_Chr5g0075091 RchiOBHm_Chr5g0075101 RchiOBHm_Chr5g0075881 RchiOBHm_Chr6g0284591 RchiOBHm_Chr6g0284651
rosa_laevigata RLG00000004885 RLG00000012734 RLG00000018267 RLG00000018268 RLG00000018269 RLG00000018272 RLG00000021158 RLG00000021159 RLG00000023360 RLG00000025795 RLG00000028499 RLG00000033066 RLG00000033210 RLG00000033336 RLG00000033339 RLG00000033886 RLG00000034355 RLG00000036157 RLG00000036529
rosa_multiflora Rmu_co8023544.1_g000001 Rmu_co8070216.1_g000001 Rmu_co8115708.1_g000001 Rmu_co8182078.1_g000001 Rmu_co8269411.1_g000001 Rmu_sc0000533.1_g000049 Rmu_sc0001366.1_g000029 Rmu_sc0001366.1_g000030 Rmu_sc0001647.1_g000003 Rmu_sc0002121.1_g000005 Rmu_sc0002253.1_g000042 Rmu_sc0002652.1_g000020 Rmu_sc0002703.1_g000001 Rmu_sc0002944.1_g000029 Rmu_sc0002944.1_g000030 Rmu_sc0003368.1_g000004 Rmu_sc0003368.1_g000011 Rmu_sc0003819.1_g000014 Rmu_sc0004191.1_g000062 Rmu_sc0004191.1_g000064 Rmu_sc0004221.1_g000007 Rmu_sc0004800.1_g000015 Rmu_sc0005047.1_g000003 Rmu_sc0005047.1_g000004 Rmu_sc0005719.1_g000011 Rmu_sc0006847.1_g000006 Rmu_sc0006847.1_g000007 Rmu_sc0006847.1_g000009 Rmu_sc0006847.1_g000012 Rmu_sc0006847.1_g000014 Rmu_sc0006847.1_g000021 Rmu_sc0007753.1_g000009 Rmu_sc0009432.1_g000001 Rmu_sc0009958.1_g000006 Rmu_sc0010426.1_g000008 Rmu_sc0010618.1_g000001 Rmu_sc0010618.1_g000002 Rmu_sc0011187.1_g000003 Rmu_sc0015338.1_g000001 Rmu_sc0015338.1_g000008 Rmu_sc0015338.1_g000010 Rmu_sc0016526.1_g000004 Rmu_sc0017252.1_g000002 Rmu_sc0030815.1_g000002 Rmu_sc0040072.1_g000001 Rmu_sc0042974.1_g000001 Rmu_sc0042975.1_g000001 Rmu_ssc0000217.1_g000006 Rmu_ssc0000357.1_g000027
rosa_roxburghii Rroxscaffold_1G00005800 Rroxscaffold_1G00006520 Rroxscaffold_1G00010390 Rroxscaffold_1G00010420 Rroxscaffold_1G00013590 Rroxscaffold_1G00019550 Rroxscaffold_1G00042090 Rroxscaffold_1G00048480 Rroxscaffold_1G00049110 Rroxscaffold_1G00049120 Rroxscaffold_1G00049990 Rroxscaffold_1G00050980 Rroxscaffold_1G00051570 Rroxscaffold_1G00051610 Rroxscaffold_2G00090440 Rroxscaffold_2G00101710 Rroxscaffold_2G00127180 Rroxscaffold_2G00127200 Rroxscaffold_2G00147200 Rroxscaffold_3G00236860 Rroxscaffold_4G00305010 Rroxscaffold_4G00305020 Rroxscaffold_6G00399460 Rroxscaffold_6G00399470 Rroxscaffold_6G00399940 Rroxscaffold_6G00399950 Rroxscaffold_7G00210650
rosa_rugosa Rorug01G0209300 Rorug01G0209400 Rorug01G0209500 Rorug01G0209600 Rorug01G0209700 Rorug01G0209800 Rorug02G0043500 Rorug02G0206500 Rorug02G0206700 Rorug03G0195800 Rorug03G0195800 Rorug04G0105900 Rorug05G0103800 Rorug05G0111500 Rorug05G0176100 Rorug05G0178200 Rorug05G0337600 Rorug05G0337700 Rorug05G0385700 Rorug05G0436300 Rorug05G0438300 Rorug05G0438400 Rorug05G0438500 Rorug05G0438600 Rorug05G0438700 Rorug05G0443100.1 Rorug05G0443200 Rorug06G0164600
rosa_samantha Rh2CG525500 Rh2CG526300 Rh5AG399000 Rh5CG410800 Rh5CG437000 Rh5CG538800 Rh5DG197300 Rh5DG197600 Rh5DG226300 Rh5DG226400 Rh5DG226500 Rh5DG494400 Rh5DG494500 Rh5DG527500 Rh5DG534000 Rh6BG079300 Rh6CG186400
rosa_wichuraiana Rw0G017740 Rw1G019240 Rw1G019340 Rw2G020600 Rw3G022120 Rw3G022140 Rw5G018000 Rw5G018020 Rw5G018460 Rw5G020200 Rw5G020210 Rw5G020230 Rw5G024530 Rw5G037640 Rw5G039720 Rw5G043170 Rw5G045780 Rw5G046420 Rw6G023850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 417
AccI GTMKAC 1 cut(s) 899
AccII CGCG 1 cut(s) 554
AciI CCGC 5 cut(s) 101, 163, 236, 506, 552
AcoI YGGCCR 2 cut(s) 75, 1087
AcuI CTGAAG 2 cut(s) 60, 1025
AcyI GRCGYC 1 cut(s) 150
AfaI GTAC 1 cut(s) 51
AfiI CCNNNNNNNGG 2 cut(s) 505, 528
AflIII ACRYGT 1 cut(s) 958
AgsI TTSAA 3 cut(s) 246, 357, 777
AjnI CCWGG 3 cut(s) 527, 536, 884
AluBI AGCT 3 cut(s) 226, 326, 560
AluI AGCT 3 cut(s) 226, 326, 560
Alw26I GTCTC 1 cut(s) 830
AlwNI CAGNNNCTG 1 cut(s) 563
Ama87I CYCGRG 1 cut(s) 803
AoxI GGCC 4 cut(s) 75, 383, 593, 1087
ApeKI GCWGC 4 cut(s) 206, 326, 584, 628
ArsI GACNNNNNNTTYG 2 cut(s) 72, 104
AspA2I CCTAGG 1 cut(s) 380
AspLEI GCGC 2 cut(s) 584, 628
AspS9I GGNCC 4 cut(s) 271, 664, 789, 888
AsuHPI GGTGA 1 cut(s) 19
AvaI CYCGRG 1 cut(s) 803
AvaII GGWCC 4 cut(s) 271, 664, 789, 888
AvrII CCTAGG 1 cut(s) 380
AxyI CCTNAGG 1 cut(s) 65
BalI TGGCCA 1 cut(s) 1089
BanII GRGCYC 1 cut(s) 536
BarI GAAGNNNNNNTAC 2 cut(s) 33, 65
BbvI GCAGC 4 cut(s) 193, 313, 571, 615
BccI CCATC 1 cut(s) 162
BcgI CGANNNNNNTGC 2 cut(s) 620, 654
BciT130I CCWGG 3 cut(s) 529, 538, 886
BclI TGATCA 1 cut(s) 126
BcoDI GTCTC 1 cut(s) 830
BfaI CTAG 3 cut(s) 381, 500, 1111
BfoI RGCGCY 1 cut(s) 585
BisI GCNGC 5 cut(s) 163, 207, 327, 585, 629
BlnI CCTAGG 1 cut(s) 380
BlsI GCNGC 5 cut(s) 164, 208, 328, 586, 630
Bme1390I CCNGG 3 cut(s) 529, 538, 886
Bme18I GGWCC 4 cut(s) 271, 664, 789, 888
BmeT110I CYCGRG 1 cut(s) 803
BmgT120I GGNCC 4 cut(s) 271, 664, 789, 888
BmiI GGNNCC 3 cut(s) 350, 535, 790
BmrFI CCNGG 3 cut(s) 529, 538, 886
BmsI GCATC 2 cut(s) 613, 708
BoxI GACNNNNGTC 1 cut(s) 614
BplI GAGNNNNNCTC 2 cut(s) 503, 535
Bpu10I CCTNAGC 1 cut(s) 523
BpuEI CTTGAG 1 cut(s) 708
BsaAI YACGTR 2 cut(s) 53, 754
BsaHI GRCGYC 1 cut(s) 150
BsaJI CCNNGG 3 cut(s) 380, 528, 1012
BsaXI ACNNNNNCTCC 2 cut(s) 976, 1006
Bsc4I CCNNNNNNNGG 2 cut(s) 505, 528
Bse118I RCCGGY 1 cut(s) 73
Bse1I ACTGG 2 cut(s) 262, 611
Bse21I CCTNAGG 1 cut(s) 65
Bse3DI GCAATG 2 cut(s) 96, 1024
BseBI CCWGG 3 cut(s) 529, 538, 886
BseDI CCNNGG 3 cut(s) 380, 528, 1012
BseGI GGATG 1 cut(s) 319
BseLI CCNNNNNNNGG 2 cut(s) 505, 528
BseMI GCAATG 2 cut(s) 96, 1024
BseMII CTCAG 3 cut(s) 56, 172, 825
BseNI ACTGG 2 cut(s) 262, 611
BseXI GCAGC 4 cut(s) 193, 313, 571, 615
Bsh1236I CGCG 1 cut(s) 554
BshFI GGCC 4 cut(s) 77, 385, 595, 1089
BsiHKCI CYCGRG 1 cut(s) 803
BsiSI CCGG 1 cut(s) 74
BslFI GGGAC 1 cut(s) 1061
BslI CCNNNNNNNGG 2 cut(s) 505, 528
BsmAI GTCTC 1 cut(s) 830
BsmFI GGGAC 1 cut(s) 1061
BsnI GGCC 4 cut(s) 77, 385, 595, 1089
BsoBI CYCGRG 1 cut(s) 803
Bsp1286I GDGCHC 1 cut(s) 536
Bsp143I GATC 1 cut(s) 126
BspACI CCGC 5 cut(s) 101, 163, 236, 506, 552
BspANI GGCC 4 cut(s) 77, 385, 595, 1089
BspCNI CTCAG 3 cut(s) 57, 171, 826
BspFNI CGCG 1 cut(s) 554
BspLI GGNNCC 3 cut(s) 350, 535, 790
BspQI GCTCTTC 1 cut(s) 1001
BsrDI GCAATG 2 cut(s) 96, 1024
BsrFI RCCGGY 1 cut(s) 73
BsrI ACTGG 2 cut(s) 262, 611
BssAI RCCGGY 1 cut(s) 73
BssECI CCNNGG 3 cut(s) 380, 528, 1012
BssMI GATC 1 cut(s) 126
BssNAI GTATAC 1 cut(s) 900
BssNI GRCGYC 1 cut(s) 150
BssT1I CCWWGG 2 cut(s) 380, 1012
Bst1107I GTATAC 1 cut(s) 900
Bst2UI CCWGG 3 cut(s) 529, 538, 886
Bst4CI ACNGT 1 cut(s) 613
Bst6I CTCTTC 3 cut(s) 649, 858, 1001
BstACI GRCGYC 1 cut(s) 150
BstBAI YACGTR 2 cut(s) 53, 754
BstC8I GCNNGC 1 cut(s) 75
BstDEI CTNAG 5 cut(s) 65, 158, 309, 523, 834
BstENI CCTNNNNNAGG 1 cut(s) 526
BstF5I GGATG 1 cut(s) 319
BstFNI CGCG 1 cut(s) 554
BstH2I RGCGCY 1 cut(s) 585
BstHHI GCGC 2 cut(s) 584, 628
BstKTI GATC 1 cut(s) 129
BstMAI GTCTC 1 cut(s) 830
BstMBI GATC 1 cut(s) 126
BstNI CCWGG 3 cut(s) 529, 538, 886
BstNSI RCATGY 1 cut(s) 962
BstPAI GACNNNNGTC 1 cut(s) 614
BstSCI CCNGG 3 cut(s) 527, 536, 884
BstUI CGCG 1 cut(s) 554
BstV1I GCAGC 4 cut(s) 193, 313, 571, 615
BstZ17I GTATAC 1 cut(s) 900
Bsu36I CCTNAGG 1 cut(s) 65
BsuRI GGCC 4 cut(s) 77, 385, 595, 1089
BtsCI GGATG 1 cut(s) 319
BtsIMutI CAGTG 3 cut(s) 255, 693, 1001
Cac8I GCNNGC 1 cut(s) 75
CaiI CAGNNNCTG 1 cut(s) 563
CfoI GCGC 2 cut(s) 584, 628
Cfr10I RCCGGY 1 cut(s) 73
Cfr13I GGNCC 4 cut(s) 271, 664, 789, 888
CseI GACGC 2 cut(s) 158, 543
Csp6I GTAC 1 cut(s) 50
CviAII CATG 6 cut(s) 91, 114, 268, 591, 859, 959
CviQI GTAC 1 cut(s) 50
DdeI CTNAG 5 cut(s) 65, 158, 309, 523, 834
DpnI GATC 1 cut(s) 128
DpnII GATC 1 cut(s) 126
EaeI YGGCCR 2 cut(s) 75, 1087
Eam1104I CTCTTC 3 cut(s) 649, 858, 1001
EarI CTCTTC 3 cut(s) 649, 858, 1001
EciI GGCGGA 1 cut(s) 225
Eco130I CCWWGG 2 cut(s) 380, 1012
Eco147I AGGCCT 1 cut(s) 385
Eco24I GRGCYC 1 cut(s) 536
Eco32I GATATC 1 cut(s) 976
Eco47I GGWCC 4 cut(s) 271, 664, 789, 888
Eco57I CTGAAG 2 cut(s) 60, 1025
Eco81I CCTNAGG 1 cut(s) 65
Eco88I CYCGRG 1 cut(s) 803
EcoNI CCTNNNNNAGG 1 cut(s) 526
EcoO109I RGGNCCY 1 cut(s) 664
EcoRII CCWGG 3 cut(s) 527, 536, 884
EcoRV GATATC 1 cut(s) 976
EcoT14I CCWWGG 2 cut(s) 380, 1012
EcoT38I GRGCYC 1 cut(s) 536
ErhI CCWWGG 2 cut(s) 380, 1012
FaeI CATG 6 cut(s) 94, 117, 271, 594, 862, 962
FaqI GGGAC 1 cut(s) 1061
FatI CATG 6 cut(s) 90, 113, 267, 590, 858, 958
FauNDI CATATG 1 cut(s) 767
FbaI TGATCA 1 cut(s) 126
FblI GTMKAC 1 cut(s) 899
Fnu4HI GCNGC 5 cut(s) 163, 207, 327, 585, 629
FokI GGATG 1 cut(s) 326
FriOI GRGCYC 1 cut(s) 536
Fsp4HI GCNGC 5 cut(s) 163, 207, 327, 585, 629
FspBI CTAG 3 cut(s) 381, 500, 1111
GlaI GCGC 2 cut(s) 583, 627
GluI GCNGC 5 cut(s) 163, 207, 327, 585, 629
HaeII RGCGCY 1 cut(s) 585
HaeIII GGCC 4 cut(s) 77, 385, 595, 1089
HapII CCGG 1 cut(s) 74
HgaI GACGC 2 cut(s) 158, 543
HhaI GCGC 2 cut(s) 584, 628
Hin1I GRCGYC 1 cut(s) 150
Hin1II CATG 6 cut(s) 94, 117, 271, 594, 862, 962
Hin6I GCGC 2 cut(s) 582, 626
HinP1I GCGC 2 cut(s) 582, 626
HinfI GANTC 6 cut(s) 5, 232, 446, 642, 838, 881
HpaII CCGG 1 cut(s) 74
HphI GGTGA 1 cut(s) 19
Hpy166II GTNNAC 2 cut(s) 757, 900
Hpy188I TCNGA 1 cut(s) 835
Hpy188III TCNNGA 4 cut(s) 38, 64, 124, 953
Hpy8I GTNNAC 2 cut(s) 757, 900
Hpy99I CGWCG 1 cut(s) 22
HpyAV CCTTC 3 cut(s) 357, 363, 655
HpyCH4III ACNGT 1 cut(s) 613
HpyCH4IV ACGT 2 cut(s) 52, 753
HpyCH4V TGCA 5 cut(s) 96, 108, 566, 631, 762
HpyF3I CTNAG 5 cut(s) 65, 158, 309, 523, 834
HpySE526I ACGT 2 cut(s) 52, 753
Hsp92I GRCGYC 1 cut(s) 150
Hsp92II CATG 6 cut(s) 94, 117, 271, 594, 862, 962
HspAI GCGC 2 cut(s) 582, 626
KroI GCCGGC 1 cut(s) 73
KroNI GCCGGC 1 cut(s) 75
Ksp22I TGATCA 1 cut(s) 126
Kzo9I GATC 1 cut(s) 126
LguI GCTCTTC 1 cut(s) 1001
LmnI GCTCC 2 cut(s) 539, 565
Lsp1109I GCAGC 4 cut(s) 193, 313, 571, 615
LweI GCATC 2 cut(s) 613, 708
MaeI CTAG 3 cut(s) 381, 500, 1111
MaeII ACGT 2 cut(s) 52, 753
MaeIII GTNAC 4 cut(s) 137, 281, 428, 950
MalI GATC 1 cut(s) 128
MboI GATC 1 cut(s) 126
MboII GAAGA 5 cut(s) 6, 53, 666, 875, 1018
MhlI GDGCHC 1 cut(s) 536
MlsI TGGCCA 1 cut(s) 1089
MluNI TGGCCA 1 cut(s) 1089
MlyI GAGTC 2 cut(s) 651, 832
MmeI TCCRAC 1 cut(s) 207
MnlI CCTC 7 cut(s) 60, 71, 650, 732, 1002, 1008, 1037
Mox20I TGGCCA 1 cut(s) 1089
MroNI GCCGGC 1 cut(s) 73
MscI TGGCCA 1 cut(s) 1089
MseI TTAA 1 cut(s) 942
MslI CAYNNNNRTG 3 cut(s) 101, 957, 1095
Msp20I TGGCCA 1 cut(s) 1089
MspI CCGG 1 cut(s) 74
MspR9I CCNGG 3 cut(s) 529, 538, 886
MvaI CCWGG 3 cut(s) 529, 538, 886
MvnI CGCG 1 cut(s) 554
NaeI GCCGGC 1 cut(s) 75
NdeI CATATG 1 cut(s) 767
NdeII GATC 1 cut(s) 126
NgoMIV GCCGGC 1 cut(s) 73
NlaIII CATG 6 cut(s) 94, 117, 271, 594, 862, 962
NlaIV GGNNCC 3 cut(s) 350, 535, 790
NmuCI GTSAC 2 cut(s) 428, 950
NspI RCATGY 1 cut(s) 962
PaeR7I CTCGAG 1 cut(s) 803
PceI AGGCCT 1 cut(s) 385
PciI ACATGT 1 cut(s) 958
PciSI GCTCTTC 1 cut(s) 1001
PdiI GCCGGC 1 cut(s) 75
PfeI GAWTC 3 cut(s) 232, 446, 881
PflFI GACNNNGTC 2 cut(s) 269, 668
PfoI TCCNGGA 2 cut(s) 536, 884
PkrI GCNGC 5 cut(s) 164, 208, 328, 586, 630
PleI GAGTC 2 cut(s) 650, 832
PpsI GAGTC 2 cut(s) 650, 832
Ppu21I YACGTR 2 cut(s) 53, 754
PpuMI RGGWCCY 1 cut(s) 664
PscI ACATGT 1 cut(s) 958
PshAI GACNNNNGTC 1 cut(s) 614
PsiI TTATAA 1 cut(s) 417
Psp5II RGGWCCY 1 cut(s) 664
Psp6I CCWGG 3 cut(s) 527, 536, 884
PspGI CCWGG 3 cut(s) 527, 536, 884
PspN4I GGNNCC 3 cut(s) 350, 535, 790
PspPI GGNCC 4 cut(s) 271, 664, 789, 888
PspPPI RGGWCCY 1 cut(s) 664
PspXI VCTCGAGB 1 cut(s) 803
PstNI CAGNNNCTG 1 cut(s) 563
PsyI GACNNNGTC 2 cut(s) 269, 668
RsaI GTAC 1 cut(s) 51
RsaNI GTAC 1 cut(s) 50
RseI CAYNNNNRTG 3 cut(s) 101, 957, 1095
SapI GCTCTTC 1 cut(s) 1001
SaqAI TTAA 1 cut(s) 942
SatI GCNGC 5 cut(s) 163, 207, 327, 585, 629
Sau3AI GATC 1 cut(s) 126
Sau96I GGNCC 4 cut(s) 271, 664, 789, 888
SchI GAGTC 2 cut(s) 651, 832
ScrFI CCNGG 3 cut(s) 529, 538, 886
SduI GDGCHC 1 cut(s) 536
SfaNI GCATC 2 cut(s) 613, 708
Sfr274I CTCGAG 1 cut(s) 803
SinI GGWCC 4 cut(s) 271, 664, 789, 888
SlaI CTCGAG 1 cut(s) 803
SmiMI CAYNNNNRTG 3 cut(s) 101, 957, 1095
SmlI CTYRAG 2 cut(s) 723, 803
SmoI CTYRAG 2 cut(s) 723, 803
SseBI AGGCCT 1 cut(s) 385
SsiI CCGC 5 cut(s) 101, 163, 236, 506, 552
SspMI CTAG 3 cut(s) 381, 500, 1111
StuI AGGCCT 1 cut(s) 385
StyD4I CCNGG 3 cut(s) 527, 536, 884
StyI CCWWGG 2 cut(s) 380, 1012
TaaI ACNGT 1 cut(s) 613
TaiI ACGT 2 cut(s) 55, 756
TaqI TCGA 5 cut(s) 20, 640, 804, 825, 1042
TauI GCSGC 1 cut(s) 165
TfiI GAWTC 3 cut(s) 232, 446, 881
Tru1I TTAA 1 cut(s) 942
Tru9I TTAA 1 cut(s) 942
TscAI CASTG 3 cut(s) 262, 700, 1008
TseFI GTSAC 2 cut(s) 428, 950
TseI GCWGC 4 cut(s) 206, 326, 584, 628
Tsp45I GTSAC 2 cut(s) 428, 950
TspDTI ATGAA 3 cut(s) 133, 245, 811
TspGWI ACGGA 3 cut(s) 635, 781, 968
TspRI CASTG 3 cut(s) 262, 700, 1008
Tth111I GACNNNGTC 2 cut(s) 269, 668
VpaK11BI GGWCC 4 cut(s) 271, 664, 789, 888
XagI CCTNNNNNAGG 1 cut(s) 526
XceI RCATGY 1 cut(s) 962
XcmI CCANNNNNNNNNTGG 1 cut(s) 197
XhoI CTCGAG 1 cut(s) 803
XmaJI CCTAGG 1 cut(s) 380
XmiI GTMKAC 1 cut(s) 899
XspI CTAG 3 cut(s) 381, 500, 1111
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.